mRNA_F-serratus_M_contig790.19181.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig790.19181.1 vs. uniprot
Match: A0A6H5J880_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J880_9PHAE) HSP 1 Score: 136 bits (343), Expect = 6.010e-30 Identity = 100/263 (38.02%), Postives = 138/263 (52.47%), Query Frame = 3
Query: 993 QTRATSTAQKAPKIPRYPRVSFTPSGNAKC--LAEALEEAVSAEMEGLLSKRGNIPACKAAVDAAMDAMREIRRQVSDIGVELDPFPG-NIKLLRKVFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDSXXNEAGGTGARLSSSGVTTQEDGFFETGDDPEGEEAPPPADSNGEGTAKRVSDELLASTNDMLLNAGAIGRCLQEMGAGFADAQEAKERLGRVYKQFAFRNYPNANDPKTLIASMFQ 1772
+TR +STA+ A K+PRYP+V +G AK +++AL+ AV++E++GL+ KRG P CKAAV A D+ +I + +I LDP P ++K +RK E A +E G S +G + E D E E A +G T KRV DE++ASTN M+LNA AIGRCLQEMG+G ADAQE KERL +V++Q + ++YPN NDPK IA+M +
Sbjct: 272 KTRRSSTAKSARKVPRYPQVLPETAGYAKPRNMSDALKIAVASEIKGLIRKRGKEPDCKAAVQACKDSGMQILKHAKEICAGLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ--------AKVQAHDEIQAHGHVPSLTG-NKEVRALLEPLDQDEEECAAVNPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 525
BLAST of mRNA_F-serratus_M_contig790.19181.1 vs. uniprot
Match: D8LIH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH4_ECTSI) HSP 1 Score: 124 bits (310), Expect = 3.380e-28 Identity = 86/231 (37.23%), Postives = 118/231 (51.08%), Query Frame = 3
Query: 1083 LAEALEEAVSAEMEGLLSKRGNIPACKAAVDAAMDAMREIRRQVSDIGVELDPFPG-NIKLLRKVFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDSXXNEAGGTGARLSSSGVTTQEDGFFETGDDPEGEEAPPPADSNGEGTAKRVSDELLASTNDMLLNAGAIGRCLQEMGAGFADAQEAKERLGRVYKQFAFRNYPNANDPKTLIASMFQ 1772
+++AL+ AV+AE++GL+ KRG P CKAAV A D+ ++ + +I +LDP P ++K +RK E A NE G S +G + E D E E A +G T KRV DE++ASTN M+LNA AIGRCLQEMG+G ADAQE KERL +V++Q + ++YPN NDPK IA+M +
Sbjct: 1 MSDALKIAVAAEIKGLIRKRGKEPDCKAAVQACKDSGMQVLKHAKEICADLDPRPKVDLKEVRKALAEESRRYHAQIAEEEKLWAIEEQKCLALAESTKRSQ--------AKVQAHNEKQAHGHVPSLTG-NKEVRALLEPLDQDEEESAAANPSLDGTDTCKRVCDEIVASTNHMILNATAIGRCLQEMGSGVADAQETKERLAQVFRQVSLKSYPNVNDPKAGIAAMLK 222 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig790.19181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig790.19181.1 >prot_F-serratus_M_contig790.19181.1 ID=prot_F-serratus_M_contig790.19181.1|Name=mRNA_F-serratus_M_contig790.19181.1|organism=Fucus serratus male|type=polypeptide|length=495bp MKPSRGLKSSSNGSSKRGRHRKRIGTPGASGIEFEATSVGHEGGNLEDATback to top mRNA from alignment at F-serratus_M_contig790:75020..94441- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig790.19181.1 ID=mRNA_F-serratus_M_contig790.19181.1|Name=mRNA_F-serratus_M_contig790.19181.1|organism=Fucus serratus male|type=mRNA|length=19422bp|location=Sequence derived from alignment at F-serratus_M_contig790:75020..94441- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig790:75020..94441- >mRNA_F-serratus_M_contig790.19181.1 ID=mRNA_F-serratus_M_contig790.19181.1|Name=mRNA_F-serratus_M_contig790.19181.1|organism=Fucus serratus male|type=CDS|length=2970bp|location=Sequence derived from alignment at F-serratus_M_contig790:75020..94441- (Fucus serratus male)back to top |