mRNA_F-serratus_M_contig79.19172.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig79.19172.1
Unique NamemRNA_F-serratus_M_contig79.19172.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: D8LCJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ3_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 4.480e-117
Identity = 171/310 (55.16%), Postives = 204/310 (65.81%), Query Frame = 2 
Query:  239 LRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYWCD----------------------------RLAEGGD--GRRGSMTLQEWWPSYSPSSCAEVDSAEDDGGEESWPGGVPPLAGVF 1078
            LRP++DLTS CFDFPA NFD +N +KAVNGG+TPYLP+  G+DA+DFTLHDL G  W+L ETL RT  PVVM+WGM  CPGFQGYGT PPWD   Y +EY+LV +Y G+ATFVHLYGPEPHP +PGTNFD G+TW  FWS+  Q   Y++R AMA +I  LIH  Q IL DY PGNPYS+L+QPVWCSY+M AR VT+++P G L+FQRAWF +EHVG AID+YWC                             R  EGG   G RG+ +  E      P        A D  G+   PG +PPLAGV 
Sbjct:  129 LRPEADLTSNCFDFPANNFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLEGRRWNLGETLERTGLPVVMVWGMFICPGFQGYGTYPPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVYPQATSYDERAAMAQRINRLIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRAWFHSEHVGRAIDEYWCQQEQXXXXXXGEALRRRSGDSPLQEREGLRQEEGGGLGGFRGTASGGE-----GPPPGEREAGASDAAGDMGEPG-IPPLAGVL 432
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A6H5KKN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN7_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 3.530e-116
Identity = 154/232 (66.38%), Postives = 183/232 (78.88%), Query Frame = 2 
Query:  227 ASTGLRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYWCDR 922
            AS  LRP+SDLTS CFDFPA NFD +N +KAVNGG+TPYLP+  G+DA+DFTLHDL+G  W+L ETL RT  PVVM+WGM TCP FQGYGT PPWD   Y +EY+LV +Y G+ATFVHLYGPEPHP +PGTNFD G+TW  FWS+  Q   YE+RVAMA +I   IH  Q IL DY PGNPYS+L+QPVWCSY+M AR VT+++P G L+FQR WF +EHVG AID+YWC +
Sbjct:  155 ASAELRPESDLTSNCFDFPANNFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLKGRRWNLGETLERTGLPVVMVWGMFTCPAFQGYGTYPPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVFQQATRYEERVAMAQRIGRRIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRGWFHSEHVGRAIDEYWCQQ 386
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A6H5L0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M4_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 8.030e-79
Identity = 128/275 (46.55%), Postives = 168/275 (61.09%), Query Frame = 2 
Query:  221 SAASTGLRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDL-RGEAWSLAETLNRT--DA--PVVMIWGMITCPGFQGYGTEPP---WDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYWCDR----LAEGGDGRRGSMTLQEWWPSYSPSSCAEV 1009
            S+A+  LRP+S+LT  CFDFP+ NFD +  +  + G  +P L +E G  AIDFT HD   GE W+L E L     DA  PVV+IWGM TCP FQG G +PP   WD   Y +EY+LV +YK R TFVHLYGPEPHP  P TNFD G     +WS V Q + YE R+AM  ++  L+H +Q I+PDY PGNPYSDL+ P+WCSY + AR  T IA  GT+++Q+ W     +   +D +   R     A    G+ G+  LQ+ + S   +S + V
Sbjct:   25 SSAAVNLRPESELTGNCFDFPSNNFDRQRSMIGMYG-QSPKLLLETGSGAIDFTSHDYPAGEPWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPSPPWDKCGYRDEYDLVETYKDRVTFVHLYGPEPHPTAPATNFDHGVVVNSYWSTVPQPKSYEQRLAMVDRVKDLVHPEQAIIPDYMPGNPYSDLINPLWCSYGIGARPATAIAQDGTIFYQQEWLHTGDLANELDVFLEGRGDPDAAAALGGKVGAGALQDQYGSLDSASRSSV 298
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A6H5JSG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 7.490e-65
Identity = 110/248 (44.35%), Postives = 147/248 (59.27%), Query Frame = 2 
Query:  239 LRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNR-TDAPVVMIWGMITCPGFQGY----GTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYW-CDRLAEGGDGRRGSMTL 964
            L P+++L + C++FP  NF   N ++ + G  +P+L  + G  A+DFTLHDL G  W+L E L      PVVMI+GM TCP FQG     G+   W   +Y  E+ LV  Y  +A FVH+YGPEPHP+ P  NFD GS  P+ WS+  Q   Y+ RV  A +I  + H D+V+LPDY  GNPYS L QPVWC+YA  AR   M++ SG++++Q+ W   E +  AID YW  D      DG   S  L
Sbjct:   27 LLPETELITNCYNFPEENFHKGNSIRDIYGT-SPHLVRDLGSPAVDFTLHDLDGNRWNLGEVLAAGAGKPVVMIFGMWTCPAFQGLDAAEGSGNTW---AYWHEHNLVEQYGDKAIFVHIYGPEPHPQPPDLNFDSGSFAPNAWSVYRQPVMYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSIFYQQEWMSTEGLENAIDGYWEQDGAGTWDDGEGASPVL 270
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A835Z1L4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L4_9STRA)

HSP 1 Score: 210 bits (535), Expect = 6.190e-63
Identity = 107/234 (45.73%), Postives = 138/234 (58.97%), Query Frame = 2 
Query:  227 ASTGLRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRA---TFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSD-----LVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAID 904
            A++ LR  S+LT  C+ FP  NF+  NC+K   G  +P++ ++AG  AIDFTL+DL G AW+L+E L     PV +IWGM TCP F+G GT  P+D  +Y +E  LVA+Y G      F HL GPEPHP  P TNFD G    +FWS V Q R Y+ RVAMA  +A  +H +  +LPD  P  PY D       QPVWCSYA  AR   +I   G +   + WF A  +  AI+
Sbjct:    1 AASQLRDASELTDSCYGFPDDNFNGTNCIKCTYGT-SPHIVLDAGAAAIDFTLYDLDGAAWTLSEHL--ASQPVCLIWGMHTCPAFEGLGTASPFDECAYWDEAALVAAYGGSGGGVAFAHLVGPEPHPITPDTNFDSGVVKVNFWSTVAQARTYDARVAMARAVADKVHPNAALLPDLLPDAPYGDGDAAAAAQPVWCSYAHGARTAVLIGTDGVVRLAQTWFHAGDMAAAIE 231
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: D8LC80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC80_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.140e-60
Identity = 101/213 (47.42%), Postives = 134/213 (62.91%), Query Frame = 2 
Query:  290 NFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDA-PVVMIWGMITCPGFQGY----GTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYW 913
            NF   N V+ + G  +P+L  + G  A+DFTLHDL G  W+L E L   +  PVV+I+GM TCP +QG     G+   W   SY +E+ LV  Y  +A FVH+YGPEPHPK P  NFD G+  P+FWS+  Q   Y+ RV  A +I  + H D+V+LPDY  GNPYS L QPVWC+YA  AR   M++ SG++++Q+ W   E +G AID YW
Sbjct:   19 NFHKGNSVRDIYGT-SPHLVRDLGSPAVDFTLHDLDGNRWNLGEVLAAGEGKPVVLIFGMWTCPAYQGLDVIEGSGNTW---SYWDEHTLVEQYGDKAIFVHIYGPEPHPKPPDLNFDAGTFSPNFWSVHRQPVIYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSVFYQQEWLSTEGLGNAIDGYW 227
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A7S2RV85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV85_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.440e-58
Identity = 95/237 (40.08%), Postives = 142/237 (59.92%), Query Frame = 2 
Query:  206 GLAAASAASTGLRPQSDLTSGCFDFPARNFDPKNCVKAVNG-GHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDL---VQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAID 904
            G+A  + A   L P S L+SGCF  P + F  ++ +  V+  G   ++   AGD A+DFTL+DL G   +L+  L   D PV +IWGM TCP FQG  ++ P+D +S  EE+++V  YK   TF+HL GPEPHP  P  NFDKG  W   WS V Q  +Y++R+ +A+++A  +H D  +L D +PGN Y+       PVWC+  + +R+  ++   GT+ F ++WF+ + +  AID
Sbjct:   16 GVAGLAVALAELDPASQLSSGCFGLPEKGFGLQSNIAQVDADGEAVWVSRAAGDSAVDFTLYDLAGNEVTLSTLLE--DKPVALIWGMWTCPAFQGLRSDYPFDQNSRWEEWDVVEKYKDVVTFLHLVGPEPHPLAPDQNFDKGYVWMESWSTVRQPTNYDERLVLANKVAEYVHPDATVLADLYPGNSYAAADVSSNPVWCTMGLHSRSALLVDQDGTITFSQSWFRKDDLSAAID 250
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A7S3K7C6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K7C6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 8.640e-44
Identity = 86/227 (37.89%), Postives = 119/227 (52.42%), Query Frame = 2 
Query:  269 CFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAID----FTLHDLRGEAWSLAETLNRTDAPV-VMIWGMITCPGFQGYGT--EPPWDMDSYGEEYELVASYKGRAT-FVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLV-------QPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAID 904
            CFDFP R+F   NCVK   G  +P++P+  GD+        TL    G +W    T   T   + V+IWGM TCP FQG GT   PP+D  SY +EY+LV +Y  +   F+HL GPEPHP  P  NFD G    ++WS + Q + ++DR+ +A + A LIH   + L D     P            QP WC+  + AR   +I   GT+ F + WF+   +  A+D
Sbjct:   25 CFDFPKRSFSTTNCVKCTYGA-SPHIPVSVGDNISPQLQALTLSTASGSSWKSLGT--ETSGKISVLIWGMWTCPAFQGLGTGGSPPFDECSYRDEYDLVETYANKGVRFIHLIGPEPHPITPDVNFDSGKQLMNYWSTIAQPKTWDDRLQVAQRTAALIHPRSLTLVDPLADAPTQHKEGTEGFKNQPTWCTLGLGARTAILIDQHGTVQFTQDWFRKSDLANALD 248
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A7S2C362_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C362_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.290e-29
Identity = 80/234 (34.19%), Postives = 115/234 (49.15%), Query Frame = 2 
Query:  239 LRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYE---LVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQ-------PVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKY 910
            L+  S+L   CF+FP+ +FD  N + A    + P   +  G  AIDF L  L    + L + + RT  PVVM++GM+TCP FQG   E     +S+  +Y+   LV  Y     FV+LY  EPHP  P  NFD G    + WS   Q R Y DR   A  +A  +H   ++L D        +L +       PVWC+Y   +R   +I   G LY  + WF A  +  A++++
Sbjct:   52 LQNTSNLIGKCFNFPSSDFDYDNSINAYYP-NDPTPLVARGGFAIDFALPSLDDNVYYLRDLI-RTK-PVVMVYGMLTCPAFQGLYLED--HKESHFSKYDQWALVDKYHKDFHFVNLYSVEPHPMAPDKNFDTGGHVEYAWSTFRQPRTYRDRGYFAQNLAEELHEKSILLVDNLGNEKLPELKENNIPEYNPVWCTYGPGSRMAFLIGQDGKLYNVQGWFHATTMAGAMEEH 280
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BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Match: A0A7S2G552_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G552_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.460e-25
Identity = 64/212 (30.19%), Postives = 102/212 (48.11%), Query Frame = 2 
Query:  239 LRPQSDLTSGCFDFPARNFDPKNCVKAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWGMITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIPGTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPGNPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWF 874
            L+ +  L + CF +P  +F P+N V ++ G   PYL    GD A+DFT+  + GE  +L   L+    PVVMI+GM TCP              + G E  L   Y     F+H+Y  +PHP+ P  N D G  W   +S +++  +Y  R+ +A   A     +  ++ D    +P  +   P+WC+Y  + R+  +I   G +   + WF
Sbjct:   35 LQGEHSLLTDCFGWPEASFSPENSVLSLYG-QQPYLTRRTGDPAVDFTMKTIDGEVVNLKALLSTK--PVVMIFGMYTCPVTHA----------TLGHERNLTELYGDDVHFLHIYSMDPHPESPQKNPDIGRVWEFDYSTIERPNNYTGRLELAKATAGTWGLNSKVIVD--EASPLRN--NPLWCTYGPSPRSAHLIRQDGIIQLAQTWF 229
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LCJ3_ECTSI4.480e-11755.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKN7_9PHAE3.530e-11666.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0M4_9PHAE8.030e-7946.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSG9_9PHAE7.490e-6544.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1L4_9STRA6.190e-6345.73Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LC80_ECTSI2.140e-6047.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RV85_9STRA2.440e-5840.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K7C6_9STRA8.640e-4437.89Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2C362_9STRA1.290e-2934.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2G552_9STRA5.460e-2530.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig79contigF-serratus_M_contig79:748928..756263 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-03_002700.1
Exons3
Model size1147
Cds size1134
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig79.19172.1prot_F-serratus_M_contig79.19172.1Fucus serratus malepolypeptideF-serratus_M_contig79 748941..756263 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932348.0688236-UTR-F-serratus_M_contig79:748927..7489401622932348.0688236-UTR-F-serratus_M_contig79:748927..748940Fucus serratus maleUTRF-serratus_M_contig79 748928..748940 +
1690964264.75642-UTR-F-serratus_M_contig79:748927..7489401690964264.75642-UTR-F-serratus_M_contig79:748927..748940Fucus serratus maleUTRF-serratus_M_contig79 748928..748940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932348.0834608-CDS-F-serratus_M_contig79:748940..7494711622932348.0834608-CDS-F-serratus_M_contig79:748940..749471Fucus serratus maleCDSF-serratus_M_contig79 748941..749471 +
1690964264.7674866-CDS-F-serratus_M_contig79:748940..7494711690964264.7674866-CDS-F-serratus_M_contig79:748940..749471Fucus serratus maleCDSF-serratus_M_contig79 748941..749471 +
1622932348.1000273-CDS-F-serratus_M_contig79:752606..7527981622932348.1000273-CDS-F-serratus_M_contig79:752606..752798Fucus serratus maleCDSF-serratus_M_contig79 752607..752798 +
1690964264.7827258-CDS-F-serratus_M_contig79:752606..7527981690964264.7827258-CDS-F-serratus_M_contig79:752606..752798Fucus serratus maleCDSF-serratus_M_contig79 752607..752798 +
1622932348.1182978-CDS-F-serratus_M_contig79:755852..7562631622932348.1182978-CDS-F-serratus_M_contig79:755852..756263Fucus serratus maleCDSF-serratus_M_contig79 755853..756263 +
1690964264.7965624-CDS-F-serratus_M_contig79:755852..7562631690964264.7965624-CDS-F-serratus_M_contig79:755852..756263Fucus serratus maleCDSF-serratus_M_contig79 755853..756263 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig79.19172.1

>prot_F-serratus_M_contig79.19172.1 ID=prot_F-serratus_M_contig79.19172.1|Name=mRNA_F-serratus_M_contig79.19172.1|organism=Fucus serratus male|type=polypeptide|length=378bp
MSDARTASDAAGRGSEAKKQRPPLRRRTSRPSSRAASRAPVTSASAPAGF
SPPTLFAVASLIGSGLAAASAASTGLRPQSDLTSGCFDFPARNFDPKNCV
KAVNGGHTPYLPMEAGDDAIDFTLHDLRGEAWSLAETLNRTDAPVVMIWG
MITCPGFQGYGTEPPWDMDSYGEEYELVASYKGRATFVHLYGPEPHPKIP
GTNFDKGSTWPHFWSMVDQHRDYEDRVAMASQIAHLIHADQVILPDYFPG
NPYSDLVQPVWCSYAMAARAVTMIAPSGTLYFQRAWFQAEHVGLAIDKYW
CDRLAEGGDGRRGSMTLQEWWPSYSPSSCAEVDSAEDDGGEESWPGGVPP
LAGVFGGAALPPTEPGRGSSAPRRPPP*
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mRNA from alignment at F-serratus_M_contig79:748928..756263+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig79.19172.1 ID=mRNA_F-serratus_M_contig79.19172.1|Name=mRNA_F-serratus_M_contig79.19172.1|organism=Fucus serratus male|type=mRNA|length=7336bp|location=Sequence derived from alignment at F-serratus_M_contig79:748928..756263+ (Fucus serratus male)
GGAGTGTCGAAAAATGAGCGACGCGAGGACGGCGAGCGACGCGGCAGGCC
GCGGAAGCGAAGCAAAGAAGCAACGACCACCTCTTAGGAGGCGAACGTCG
CGCCCCTCTTCAAGAGCAGCCTCGCGAGCGCCAGTTACTTCTGCTTCTGC
TCCTGCAGGATTTTCTCCACCAACGCTGTTCGCCGTCGCGAGCCTCATCG
GTAGCGGCCTCGCGGCGGCGTCGGCGGCGTCAACAGGGCTCCGGCCCCAG
TCCGACCTGACCTCCGGGTGCTTCGACTTCCCGGCTAGAAACTTTGACCC
TAAAAACTGTGTCAAGGCCGTGAATGGCGGCCACACGCCGTATCTGCCGA
TGGAGGCGGGCGACGACGCCATCGACTTCACGCTGCACGACCTCCGCGGC
GAAGCGTGGAGCCTCGCGGAGACGCTAAACCGGACCGACGCGCCCGTGGT
GATGATCTGGGGGATGATCACGTGCCCGGGCTTCCAGGGCTACGGCACCG
AGCCGCCGTGGGACATGGACTCTTACGGGGAGGAGTACGAGCTGGTGAGA
AGGCGGGGCGCGGGGGGAAGAGGGGTCTTGGTGTTTTGTGAGGAACGCAG
AGTCGGGGAACGGGAATCGACAGGAGAGTGAACTTGGATAGGGTTTTGTA
GTGAAAGCGCGCGATTTGAGCCGGGGAGAGGGGGGGGCTGTGGTCGACAG
ATGTGCTTAAGCCTTCTACTTGCAAGAATCAAGAAAAACGAATCGCTTTG
CACTTAGGAGAGACAAGTATTAAGAGTCAGTTCATTTCCTGACCCGAGTC
GAATTGAAAACAACAACCAAGTGCGCTCCCAGGTACTTTTTGTGAGGAAA
TAATTCTTACTCCCATCCATCCACCCCCCCCCTCCTCCTTCCTGAGGCAA
GACAAACGAAACACCCCTCCCTCCAAAAACACGAATAACAGGAAATGTCT
TTATCATATTCTTGTGCCGGGCGTTTGACGAGCCAAGGTAAAACAGTGAT
GCGTACATCAGGACCATCAGAACCCGTCGCGCCCCACAGCCGAAGTGAAA
AGGTTTATGGCCCTACATGGCGATTAATGCCATGTAGTGGCCTTGCCTTT
ACAGCCTACCGTATGAAATACTTAGTAGTATATTATTACTATACTTAGTA
GTATATTATTACTAAGCCCCTATTGGTGTATGGTGCGACACCATGGTACT
ATTTTATTATCGTATATTATTACTACCCTCTTGACTATGTACTACTGGTA
CAGTGTTTTTGGTTTTGTTATGTTTGGTGTCCCTGCATGGCGATTAATGT
AAGTGTAGAGTATAACGGTGGGCTTCTCCCCGGTATTATACTGTTGACCC
AACGTTGTTACTACCATCGGGGAGCCCGTTTAAATACCACGTAGTGTTTT
CGTCCTTACAGCCTAATGTAACAGTACATTCTTACTATACCATGTATGAT
GATGTACCGCTTCGTTTCTGTTTTATTTTTGTTGTCTGTCTGGTGTCCCT
GCATGGCGATTAATGTAAGTGCACAGTATAACGGTGGGTTTCTCCCCCGA
CATTGTACTATTGACCCAATATTACTACCATCGGGGAACCCGTTTGACTG
CCATGCAAGAGGTTTTGTATCTGCAGCCTTTGATCCCACTAAAACGTTTT
GACATATTTTTTTCCCTTGACTGGGGGATTCTCAGAAAGTCTAGGCGCGT
TCTGATTTTTCTTTATTAAACAAAAAATCGATGTAGATGCTCAAAAAAGA
AACAGGCGTGTTTTAGCGAGAGGGGACGGAGGGGGGGGGGGGGGGGGGGG
GGGGGGATTACGCGAGGTGAAGTTTCACTGGGTGTAGATCGATCGCCCCT
TGCTCGAGAAAACATTGGCGCCTCGGAAGACGCACTGAATCCGATAACCA
TATCAATACCGATTTCATCGGGATACTTGAAATTACCGTAAGAGGGAGGG
GGTAGAAAATCCCCTCCCCCCTTTACTCTTGATTACGATATAGGAGTGGA
GTGAGACGCCATCAAACAACCGCGGCGACGGAATATCTTGCCAAGGGCTG
ACCCCAACAAATATTTTGAGCACGAGTCCACTCTTAAATACATGAGGTAA
TAGGAAAAGGTTCGGGGGGGGGGGGGGGTCATTTCCCCCAGGCGGGGGGG
CGTTCTCTCCAAACATTACGAGAAACAGTATAGAGGTCTAGTAACCGCGC
CGAAAAAAATATTTTGGGGACGCCATCTCCCCCACTCCCCCCTCCCCCAC
TCCCTACAGTCTCTACTTTTCTCTGCAACAGAGGGTATGAGAAAAAAATA
GAGATTTGTTGGCCTTTTTATATCGGTGATATATATCAGTACTTTCAACT
TGCCCACTTCAAACCAATAGTGGGTGTCGGAAAGAGAGGCGTATATTAAT
TGGTCCATGGTGACCTGCTGAGGCAGCACTCGTTCGGAACTACCTTGAGG
TTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACG
CGATTGCGTGACCCGATAAACTTGGGATTGACCCGATGGCGTATGGCAGT
ACTAAATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAA
GTAAGCACCAGATTCAGCCTGAGTATGGAGATGATCAGGCTGAGGCGGGA
CGGGGCTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGTCACGAACGCG
GACAGGAAATATTCGTTTTCCCCTGTTCAGCTGACCACGAGCAGGATTGG
CAACCTTACCCGGTCGTATCCACTCCTCCCCCGCTCCCTGTTTCTGCTCC
TCCCTTCTCGCCCCTGGGATATGACCCCCCTCATGACAAACGGGCTCGCT
CGGGCGCGCGAAGTCTCGCGGCTGGTGCTGTTGGTTGTCCTTAGGCGTCA
GTCACCCCATCTCTCACATATTATTTTCTGCGTTCTATCGCGATGTAGCG
GATTCCCGAGACCTATTCCCTCCATCTCCTCTTCTCCCTTCGCCTTCTGG
CTCTCCCCCCCCGTTACCGTCTTCTCCCCTGCCCCCGCTTGTGTTTCCGT
CTTTGCTCCTGTCCCCGTTCCTGGCCCCGGTTCCGTCCCTCTCTCTGCTG
GCTGCCCTCGTTCCCGTCTGCGTTCGTCCCTTCCCGTCCCTCGGACCTGA
CTTTTTATTACCTTGGTACAATGCGCTTGCACAGGAGGTACCGGGCCTTA
CGAACGGGGCTGTTGGGGTGCCCGCAAGCGTCACTGTTTCTCTGTAGCTC
TCTGTAGAGATGACTTCGCGTGCGGAATGAAAGGGTCCTGCTGCAAAACA
AAAATAAAATCACCGCCGAAGATGTATTACTTTTGTATGATGTAGTCTAT
GTATTTATGTATGTATTTATTTTTTAGTACGTTGCACATAAACGCGCAAT
CCGCCCGTGCTGCTGGCCAGTCTAGGCTGTATTTAGTAGTACATTGCGCA
TAACCGTGCAATCCGGCCCTGTCCTGCTGATCAGTCTAAGCTCCATGCAC
CCCCCCCCCCCCCCGCGCCTCCCCTAGTAGGATATCAAATGATTGTTGCT
ACGAAAACCTCTGATGTTGGGGTCGGTGTGCGCGTGCCGTGTTGTGATGA
CCTTCACCCGCCTTCATTACTTTACAAAACCCGTCTTGCATTGCATCCCT
CAAATACTACCGACTCGGTTGTTTCAAAGGTGGCATCGTACAAGGGCCGC
GCGACGTTCGTACACCTGTACGGCCCCGAGCCGCACCCGAAGATCCCCGG
GACGAACTTCGACAAGGGAAGTACCTGGCCGCATTTCTGGAGTATGGTTG
ATCAGCACCGCGACTACGAGGATCGTGTGGCCATGGCGAGTCAGATAGCG
CACCTGATTCACGCAGATCAGGTGAGCCAATTCGGTTCAGTCGGCGCACA
CAAAACGAATCGGTCGGAGGCCGTTGAGTAACAACAGTATCTAACGTTTC
CACGGGGAAAATCGGAGGTTTTGTAGAGAGTGTACGTTACACGCAAGCGT
GTGTATGTGTGTGTTGTTGTGTTGTTGTTGTTGTTGTTGTTTCTCACATT
CAGCGTTTTGTTGTTGCCAACCCGAAAAACTACCTTACAAGGTGGCCAAT
CCCGCTCGTGGTCTGCTGAACAGGAGAAAAAAAAAGTCTGGCAGCCCGCC
CGCCCCCCCCCCTGTGTGTATTTATTAAATTATATATAACCGCGCAATGC
GGCCCTGTCATCCTAGTCCTTCTATGCCACTCGCATTGATCCTCCCGAGG
GGGGATCAATGATACTTATTACGAAAACCTCTGATCAGACGCGACAAAGG
GGATGTATTCCATTTATCTAAATGTAGATTCAATTGCTCAGCAGCAAGTT
CAAATAATTATATAGGGATATAGGGATATAGGGATATAGGGCATCTCTGG
AGAGAGAAACAAGTGTACTTGGTCGGAGGTGGGGAGGGGTGCAGTATGTA
TAAATGTATGTATGCATGTATTTACGTATGGTCATCACATATAGCAAGGG
TAAGGATCAACCGGGTAAGGTTGCCTGTCCTGCTCGTGATCAGTTGAACA
GGGAAAGTAATACTTCCCTGTCCCCGTTCGCGTCTGAGCAATTGATCTCG
CGAGACAGGTTCGGCAGTCCCGTCCCATGTCAGCCTGCTCGTCTTCATAC
TCCGGCTGAATCTCCGTCCATACATACTTACATGCATACCATAAATCAAT
TAGAAAAGGTACAAAAAAGCACAAATGCGTGCCTTGTTGCCTCTCAAACG
CCCTGTGATACATATATTCCGGAGTTTTATGCATGGAGAGGGATGCCGTG
AGTAAGCACCGTAATCAGCCTGGGTGTGGAAAATGAGCAGGCTGGCGTGG
GACGGGACTGCCGAAACCGTCTCGCAAGCCCAAATTCTCAGGCGCAAGCG
AGAACAGAGGAGAATATTTTTTTCCCTATATATAGTAGACCACTACTAAT
ATCAGGATTGCCAACCATAGCGGTTGATGCCTAATGGGCTATATGCGATG
ACTATACAGTCATACTCTGGCACATAAGAGTGCTGAACTTACATAAAATA
CTGGGAAAATACGTCGTAGGCGAGAAAACCAGGGAGAGGTGGGGAATATA
TCCTTATTGATAGTGACCACACAACAGGCAGGATGGCAACGTCGCAGTAG
GGGATGAGGTTGGTACCCTAATAGCGCGGTGAGGCTCATCGGCCGTGTAG
GTGAGCTGCAAACAAAGAAGAGCACACGCTCTCATTCGAAACGTATCGGG
AGTTCTTTGCCACGTGCAGTCCAGGAGTACCTTTCATGTACCAGGAGTAC
CTTTCATGTACCAGGAGTACCTTTATTGTTTATGCCTGTCTTCTCGCATC
GTGTTCGATGCTATCCATAGCGTGGGGTATCAAAATCTATTACGGACGCC
GCCCGCGGAACTCGGGAGGAATCCCATAAGTAAGCACGAGACTCAGCCTG
AGTGTGTGGAGATGCTGAGCAGGCTGACGCGGGACGGGACTACTGCCGAA
CCCGTCACGCGAGACCAAATTTCTCGGGCGCGAACGCGGACAAGGGAATA
TTCATTTTCCCTAAGTTCAGCTGACCACGTGCAGGATTTGCAATCTTACC
CGCGGTTCATCCTTACTGTTGCTAGATGTGTAGTCATATGCATACTACTG
TGCGTACAGTTATCAGGGGCTCGATGGACAAAAACACGGCGCACTGGGTA
GCAGATCAGTCTGTGTTTGATGTTTTCCGGTTGACTGTACAACACATCAC
AATACGCCGCATCTCGGAATGTAATACGTCCCAGAATTTTACCGTTATAT
ACAGGCTGGGCTGGCCAAGACGCTGTACACATGGCGGAATGGGATTTGCC
ACGCGGTTTTTACGAATTTTACACCAGAAATTTTGACACGTGATTAAGAC
CGCTCTTGCAAAGAGGACCACTTCTACACATTTTGGTTTTAGTTTTTTTT
GCGTAAGTTATGGTATGATAGCCGGATATAAGTAGATGTGGGAATATTTG
TTTCGCGACGAAATGATGGGAAAAATAAAAATAAATAAAAATGTGCAGGG
GTGGTCCTCTCCGCAAGAGCGGTCTAAATCACGTGTCAAAATTTCAGGTA
AAAAATCGTAAAAACCGCGTGGCAAATCGCGATACCCCCACATTTCCTCA
GTTCACTTGTGTTTTGTATCGGAATCTTTACGAGGCCGCAACTCTTGATA
GAAAACGAGGCGAGCCTTGTAACTACCACCCACGCTCTTGCGGTGCTCCT
GGGTACGTGTACACCAAATTTCAGCTTGATCCGTGACACTTTTTTTCATA
CTGATTTTAGTATAGGAAGTATCCTCCACTACGCCGCCAATTGGTCATTG
TTTACCAAAATCAACTCGGATTCGAAAAATTCCGGCGCCTGCGCTTCCCT
TTTTGCCGTATAGGAGCAGCCTCCAAATTTCAAGCTTTAACTCGTAGAAA
CGGCAGAGCGAGACATGAACGAACAGAAGTCAGTTTCTTGGCCAGCCCAG
CCTATAGTGCAACGTTACACGGCCAATAATCATTATGGGTACCTACCTCC
ACACCGATACATGTACTGCATACTCAACACCATTCAATACGGCAGTGCGA
TACATACCTACTGGTATTGCAATACGTTTTGCTATAGACTAGCTACCTAT
TCATACTACGTGTTGTACTGCAAGTGTCGTAGTGCCGGGGGAGGGATTCT
CTTTTTTCAACGCGATACGCACCTAAAGCACTTTAAATGTCTTTTTGGGC
AGTTTTGCGTTTTCGCTGTACCGTAAACGTCACTGTGTCCTGTATATATT
TTCTTCCCCCTCTCCCCCCTCCTTGAATCCCAACTGATTTTTTATTGTAC
TCCCCAACAAGGTCATCATGTATGATCCTAGAATCGAAAACATTATCCCC
CCCCCCCCCACTCCTTCCGCAAAAGGTAATATTGCCGGATTACTTTCCAG
GAAACCCTTACAGCGACCTTGTCCAGCCCGTGTGGTGCTCCTACGCGATG
GCCGCTCGGGCGGTGACCATGATCGCTCCCAGCGGTACGCTTTACTTCCA
GCGCGCCTGGTTCCAAGCGGAACACGTTGGTCTCGCCATCGACAAGTACT
GGTGCGATAGGCTGGCCGAGGGCGGGGATGGGAGACGAGGATCGATGACC
CTTCAAGAATGGTGGCCGTCATATTCTCCATCGTCTTGCGCTGAAGTGGA
TAGCGCGGAGGATGATGGAGGGGAAGAGTCGTGGCCCGGTGGCGTCCCTC
CGTTGGCTGGGGTCTTTGGCGGAGCCGCTCTGCCGCCGACGGAACCGGGG
CGGGGTTCGTCCGCGCCTAGGCGTCCTCCTCCTTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig79:748928..756263+

>mRNA_F-serratus_M_contig79.19172.1 ID=mRNA_F-serratus_M_contig79.19172.1|Name=mRNA_F-serratus_M_contig79.19172.1|organism=Fucus serratus male|type=CDS|length=2268bp|location=Sequence derived from alignment at F-serratus_M_contig79:748928..756263+ (Fucus serratus male)
ATGAGCGACGCGAGGACGGCGAGCGACGCGGCAGGCCGCGGAAGCGAAGC
AAAGAAGCAACGACCACCTCTTAGGAGGCGAACGTCGCGCCCCTCTTCAA
GAGCAGCCTCGCGAGCGCCAGTTACTTCTGCTTCTGCTCCTGCAGGATTT
TCTCCACCAACGCTGTTCGCCGTCGCGAGCCTCATCGGTAGCGGCCTCGC
GGCGGCGTCGGCGGCGTCAACAGGGCTCCGGCCCCAGTCCGACCTGACCT
CCGGGTGCTTCGACTTCCCGGCTAGAAACTTTGACCCTAAAAACTGTGTC
AAGGCCGTGAATGGCGGCCACACGCCGTATCTGCCGATGGAGGCGGGCGA
CGACGCCATCGACTTCACGCTGCACGACCTCCGCGGCGAAGCGTGGAGCC
TCGCGGAGACGCTAAACCGGACCGACGCGCCCGTGGTGATGATCTGGGGG
ATGATCACGTGCCCGGGCTTCCAGGGCTACGGCACCGAGCCGCCGTGGGA
CATGGACTCTTACGGGGAGGAGTACGAGCTGATGAGCGACGCGAGGACGG
CGAGCGACGCGGCAGGCCGCGGAAGCGAAGCAAAGAAGCAACGACCACCT
CTTAGGAGGCGAACGTCGCGCCCCTCTTCAAGAGCAGCCTCGCGAGCGCC
AGTTACTTCTGCTTCTGCTCCTGCAGGATTTTCTCCACCAACGCTGTTCG
CCGTCGCGAGCCTCATCGGTAGCGGCCTCGCGGCGGCGTCGGCGGCGTCA
ACAGGGCTCCGGCCCCAGTCCGACCTGACCTCCGGGTGCTTCGACTTCCC
GGCTAGAAACTTTGACCCTAAAAACTGTGTCAAGGCCGTGAATGGCGGCC
ACACGCCGTATCTGCCGATGGAGGCGGGCGACGACGCCATCGACTTCACG
CTGCACGACCTCCGCGGCGAAGCGTGGAGCCTCGCGGAGACGCTAAACCG
GACCGACGCGCCCGTGGTGATGATCTGGGGGATGATCACGTGCCCGGGCT
TCCAGGGCTACGGCACCGAGCCGCCGTGGGACATGGACTCTTACGGGGAG
GAGTACGAGCTGGTGGCATCGTACAAGGGCCGCGCGACGTTCGTACACCT
GTACGGCCCCGAGCCGCACCCGAAGATCCCCGGGACGAACTTCGACAAGG
GAAGTACCTGGCCGCATTTCTGGAGTATGGTTGATCAGCACCGCGACTAC
GAGGATCGTGTGGCCATGGCGAGTCAGATAGCGCACCTGATTCACGCAGA
TCAGGTGGCATCGTACAAGGGCCGCGCGACGTTCGTACACCTGTACGGCC
CCGAGCCGCACCCGAAGATCCCCGGGACGAACTTCGACAAGGGAAGTACC
TGGCCGCATTTCTGGAGTATGGTTGATCAGCACCGCGACTACGAGGATCG
TGTGGCCATGGCGAGTCAGATAGCGCACCTGATTCACGCAGATCAGGTAA
TATTGCCGGATTACTTTCCAGGAAACCCTTACAGCGACCTTGTCCAGCCC
GTGTGGTGCTCCTACGCGATGGCCGCTCGGGCGGTGACCATGATCGCTCC
CAGCGGTACGCTTTACTTCCAGCGCGCCTGGTTCCAAGCGGAACACGTTG
GTCTCGCCATCGACAAGTACTGGTGCGATAGGCTGGCCGAGGGCGGGGAT
GGGAGACGAGGATCGATGACCCTTCAAGAATGGTGGCCGTCATATTCTCC
ATCGTCTTGCGCTGAAGTGGATAGCGCGGAGGATGATGGAGGGGAAGAGT
CGTGGCCCGGTGGCGTCCCTCCGTTGGCTGGGGTCTTTGGCGGAGCCGCT
CTGCCGCCGACGGAACCGGGGCGGGGTTCGTCCGCGCCTAGGCGTCCTCC
TCCTTGAGTAATATTGCCGGATTACTTTCCAGGAAACCCTTACAGCGACC
TTGTCCAGCCCGTGTGGTGCTCCTACGCGATGGCCGCTCGGGCGGTGACC
ATGATCGCTCCCAGCGGTACGCTTTACTTCCAGCGCGCCTGGTTCCAAGC
GGAACACGTTGGTCTCGCCATCGACAAGTACTGGTGCGATAGGCTGGCCG
AGGGCGGGGATGGGAGACGAGGATCGATGACCCTTCAAGAATGGTGGCCG
TCATATTCTCCATCGTCTTGCGCTGAAGTGGATAGCGCGGAGGATGATGG
AGGGGAAGAGTCGTGGCCCGGTGGCGTCCCTCCGTTGGCTGGGGTCTTTG
GCGGAGCCGCTCTGCCGCCGACGGAACCGGGGCGGGGTTCGTCCGCGCCT
AGGCGTCCTCCTCCTTGA
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