mRNA_F-serratus_M_contig788.19140.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE) HSP 1 Score: 166 bits (419), Expect = 2.480e-45 Identity = 81/161 (50.31%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 7 LVVFGSPSFAAAERAMTDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRDVMNASFSSVAAVTASMLA 489
LVV G P +A+ ERA D + LD +VWW+W GA + +GS+VFAL+CAP LH+YS+M ++ W++V + +++ G +CY GLAGY +FR + +GDIL NF G +A+ FK V+VHLILYIP++ +V+RH+LY+L G+DVM A F VA VT ++LA
Sbjct: 287 LVVIGGPIYASEERAEPDHDPDLDTSVVWWDWVGALANLGSIVFALSCAPAVLHAYSSMTPQSTRAWRSVATWALVVGACLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKTAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLA 447
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.440e-43 Identity = 81/161 (50.31%), Postives = 113/161 (70.19%), Query Frame = 1
Query: 7 LVVFGSPSFAAAERAMTDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRDVMNASFSSVAAVTASMLA 489
LVV G P +A ERA + LD +VWW+W GA + +GS+VFAL+CAP LH+YS+M R+ W++V + ++ G +CY GLAGY +FR + +GDIL NF G +A+ FK V+VHLILYIP++ +V+RH+LY+L G+DVM A F VA VT ++LA
Sbjct: 287 LVVIGGPIYANEERAEPGHDPDLDASVVWWDWVGAVANLGSIVFALSCAPAVLHAYSSMTPRSTRAWRSVSTWALGVGVCLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKAAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLA 447
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A7S2USJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USJ8_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.130e-28 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 61 GESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRD 435
G + DEP+VW+N+ GA ++GS VFA C+ H+Y++M ++ + + +V+ G MC VTGLAGY FR TEGDILDNF GP FF++L+IVHL+LYIP D VV+R++ L D
Sbjct: 234 GSNYQDEPVVWFNFLGAVEELGSTVFAFACSYAVFHAYNSMDPGSQKGFDKLAGVTVMIGAFMCLVTGLAGYLCFRSHTEGDILDNFTGPAFYFFRLLLIVHLLLYIPLDFVVMRYSFLKLFKLD 358
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A6V1M2K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M2K4_HETAK) HSP 1 Score: 115 bits (287), Expect = 1.050e-27 Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 55 TDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGK--RTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRDVMNASFSSVAAVTASMLAVMLAVV 507
++G+ EP++W + G K GS+VFA+ CA H++ ++ +T +W V S +++ G MC VTGLAGY FR +T GDILDNF GP FFK+L++ HLILYIP D VV+RH+ ++G D + VT +L L VV
Sbjct: 97 SEGKQYRSEPILWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVV 249
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A6V2Y555_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 115 bits (287), Expect = 6.280e-27 Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 55 TDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGK--RTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRDVMNASFSSVAAVTASMLAVMLAVV 507
++G+ EP++W + G K GS+VFA+ CA H++ ++ +T +W V S +++ G MC VTGLAGY FR +T GDILDNF GP FFK+L++ HLILYIP D VV+RH+ ++G D + VT +L L VV
Sbjct: 233 SEGKQYRSEPILWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVV 385
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 114 bits (285), Expect = 1.140e-26 Identity = 65/163 (39.88%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 1 MLLVVFGSPSFAAAERAMTDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNLYSLVGRDVMNASFSSVAAVTASMLA 489
+++V+F P+ A +RA + + W++ +G FS +GS +FAL+CA H++ AM + T + W + +V+ G MC GLAGY +FR TEGDILDNF G F KIL+I+HL+LYIP D VV+RH++ + G +V + +TA +LA
Sbjct: 220 LVVVLFFGPTVGADDRAASGA-------INWFSLSGTFSSLGSALFALSCAYAAFHAFEAMRRNTGAAWAGATTPAVVIGAGMCTSMGLAGYLSFRDYTEGDILDNFSGSGWDFMKILLIIHLLLYIPIDFVVMRHSVCKIFGWNVDTMHIAPYLVLTAILLA 375
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A7S3XPM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPM9_HETAK) HSP 1 Score: 92.4 bits (228), Expect = 2.330e-19 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 79 EPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLA-AFFKILVIVHLILYIPNDAVVLRHNLYSLVGR-DVMNASFSSVAAVTASMLAVMLAVVTAL 516
+PL ++ GA +K+G++++ +N T +++AM RT +W+ V S ++ G +MC + G++GY +FRGATEGDILDNF G A K VIVHL Y+P ++ RH+ ++ + DV+ S +T +L + AVV AL
Sbjct: 61 DPLRLFDPAGAAAKVGAMLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMAL 208
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A835Z8W9_9STRA (Aa_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.860e-19 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 49 AMTDGESKLDEPLVWWNWTGAFSKIGSLVFALNCAPVTLHSYSAMGKRTESEWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVH 366
A+ DGE PLV WNW F + GS++FAL+ AP LH+Y + T +W+ V+S ++ G +CY TG+ GY +FRGAT G+IL+NF G ++ +L+ +H
Sbjct: 131 ALDDGE-----PLVLWNWLEMFERAGSVIFALSFAPAALHAYMGLVPCTPEQWRKVVSIAIAVGSVVCYTTGIIGYLSFRGATLGNILENFDGVVSDIASVLLELH 231
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A482SCF6_9ARCH (Aa_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCF6_9ARCH) HSP 1 Score: 77.0 bits (188), Expect = 2.330e-13 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 106 GAFSKIGSLVFALNCAPVTLHSYSAMGKRTES--EWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNL 414
G GS++FAL+CA +Y +++ W + ++V +G MC + G+AGY +F TEG ILDNF FFKI+V+ HLILYIP + V++R+++
Sbjct: 245 GMIKSTGSIIFALSCASANFQAYITTEPSSQNMPAWAKITGSAVFSGSLMCAMMGVAGYLSFGKDTEGVILDNFHSHGFDFFKIMVVTHLILYIPVNFVIMRYSI 349
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Match: A0A7S3HJ43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ43_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.590e-13 Identity = 38/105 (36.19%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 106 GAFSKIGSLVFALNCAPVTLHSYSAMGKRTES--EWKAVMSASVLAGGAMCYVTGLAGYHAFRGATEGDILDNFFGPLAAFFKILVIVHLILYIPNDAVVLRHNL 414
G + +GS+VF++ C ++ + +++ + W++V +V AG MC GL GY +F TEG+ILDNF FK++V++HLILYIP + V++R+++
Sbjct: 251 GMLTSVGSIVFSMECCSANFQAFVSTERKSRNMNTWRSVTGVAVFAGAIMCASMGLVGYLSFGSDTEGEILDNFTQHGYDVFKLMVVIHLILYIPVNFVIMRYSI 355 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig788.19140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig788.19140.1 >prot_F-serratus_M_contig788.19140.1 ID=prot_F-serratus_M_contig788.19140.1|Name=mRNA_F-serratus_M_contig788.19140.1|organism=Fucus serratus male|type=polypeptide|length=175bp MLLVVFGSPSFAAAERAMTDGESKLDEPLVWWNWTGAFSKIGSLVFALNCback to top mRNA from alignment at F-serratus_M_contig788:341746..343251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig788.19140.1 ID=mRNA_F-serratus_M_contig788.19140.1|Name=mRNA_F-serratus_M_contig788.19140.1|organism=Fucus serratus male|type=mRNA|length=1506bp|location=Sequence derived from alignment at F-serratus_M_contig788:341746..343251- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig788:341746..343251- >mRNA_F-serratus_M_contig788.19140.1 ID=mRNA_F-serratus_M_contig788.19140.1|Name=mRNA_F-serratus_M_contig788.19140.1|organism=Fucus serratus male|type=CDS|length=1050bp|location=Sequence derived from alignment at F-serratus_M_contig788:341746..343251- (Fucus serratus male)back to top |