mRNA_F-serratus_M_contig788.19136.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig788.19136.1 vs. uniprot
Match: D7FSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD6_ECTSI) HSP 1 Score: 233 bits (594), Expect = 6.640e-70 Identity = 154/381 (40.42%), Postives = 216/381 (56.69%), Query Frame = 1
Query: 1 MGAGASAASMSLEDRRALYQEVKSKYTRADLDALEDEARKAWLEVLTERERADLPRALGDGDGKAVPDNAGSFAS-KNSIFLSLPRLSLSFVGFYDRRFTGKISVELRQKKAPSKFAQSTALYRGRGSV-DISGGDGSTIRPQRRSTRMSYHLVSEQGEADASEG----------EDRGNVAGETATVGGLQGPSRRLSVDTPAWKRTAVQVESPVELSVGDVVKASRDTATSNGMWFEGVLTAIHDEFTFTVELTCNDQSED--MDCITVGINDLVRVMPWFCIEVDDIVEFQTNESMGWFRGVVVSIDSDKLVYDVELESDSTVREEWREKWRSDEGDG------KEEAAGRSGVIYRVVDDKIRKICSGRQAVAKRWK 1083
MGAGASAA M L++RR LY+++K+KYTR+DLD L +E ++AWLEVL ERE P A+ + AV + + A+ + + + + F + + + E+ ++A + A T GR S D+SGG + +RPQ + TR+SY LV DA E + +R S P W++ A +VE+P EL VGD+V+ RD NGMWFEGVLTAIHDE TF VEL+ +D+ E+ + ITVGI+D+VRVMPWFCIEV D+VE Q +M W RG VV+I ++ +YDV LES + + RE + ++ G K++ +YRV + IRK+ SGRQA AKRWK
Sbjct: 1 MGAGASAAGMPLQERRDLYEDLKNKYTRSDLDNLAEEEKQAWLEVLDEREAGTAPAAVTAAETTAVAEPVKNGATGEQGVEVEKREADAAACSFNEENLSVS-APEVTVREAAAAAAALTGASSGRKSGWDLSGGGDTGVRPQEKHTRLSY-LVGSDSSGDARENGXXXXXXXXXXXXXXXXXXXXXXXXXRHSGKRGSAVVPNWRKAAEEVETPNELCVGDIVRV-RDKEL-NGMWFEGVLTAIHDESTFEVELSGDDEDEEGCVQHITVGIDDVVRVMPWFCIEVGDMVECQLEGTMIWLRGTVVNIHLEQALYDVALESCEDGQADGRETYGENDVAGGGGDCEKKQGEASPNTMYRVPESSIRKVVSGRQAAAKRWK 377
BLAST of mRNA_F-serratus_M_contig788.19136.1 vs. uniprot
Match: A0A6H5JS13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS13_9PHAE) HSP 1 Score: 194 bits (494), Expect = 7.590e-55 Identity = 143/371 (38.54%), Postives = 202/371 (54.45%), Query Frame = 1
Query: 58 QEVKSKYTRADLDALEDEARKAWLEVLTERERADLPRALGDGDGKAVPDNAGSFASKN-SIFLSLPRLSLSFVGFYDRRFTGKISVELRQKKAPSKFAQSTALYRGRGSV-DISGGDGSTIRPQRRSTRMSYHLVSEQGEADASEGE--------DRGNVAGETATVGGLQGPSRRLS-----VDTPAWKRTAVQVESPVELSVGDVVKA--SRDTATSNGMWFEGVLTAIHDEFTFTVELTCNDQSED--MDCITVGINDLVRVMPWFCIE---VDDIVEFQTNESMGWFRGVVVSIDSDKLVYDVELESDSTVREE-----WREKWRSDEGDGKEEAAGRSG--VIYRVVDDKIRKICSGRQAVAKRWK 1083
Q++K+KYTR+DLD L +E ++AWLEVL ERE A+ + V + A++ + + + ++ + E+R ++A T GR S D+SG + +RPQ + TR+SY + E G D G +RGN A A GG G SRR S P W++ A +VE+P EL VGD+V+ +RD NGMWFEGVL AIHDE TF VEL +D+ E+ + ITVGI+D+VRVMPWFCIE V D+VE Q +M W RG VV++ ++ VYDV LE + ++ + E + G+ ++ G + +YRV + IRK+ SGRQA AKRWK
Sbjct: 34 QDLKNKYTRSDLDNLAEEEKQAWLEVLDEREAEAAAAAVTAAETTGVARGVENGATEERGVEVEKGEADAAACSSNEQINLSVSAPEVRVREAXXXXXALTGASSGRKSGWDLSGEGDTGVRPQAKHTRLSYLVEPESGGDDRESGRGGGSDLQAERGNRA--PADDGG--GDSRRHSGKRGSAVVPNWRKAAEEVETPNELCVGDIVRVRQARDKEL-NGMWFEGVLAAIHDESTFEVELGGDDEDEEGGVQYITVGIDDVVRVMPWFCIEASLVGDMVECQLEGTMMWLRGTVVNVHLEQAVYDVALEPECEDGQDDGLATFGENAVAGGGEDCDKKQGEASPNTMYRVPESSIRKVVSGRQAAAKRWK 399 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig788.19136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig788.19136.1 >prot_F-serratus_M_contig788.19136.1 ID=prot_F-serratus_M_contig788.19136.1|Name=mRNA_F-serratus_M_contig788.19136.1|organism=Fucus serratus male|type=polypeptide|length=361bp MGAGASAASMSLEDRRALYQEVKSKYTRADLDALEDEARKAWLEVLTEREback to top mRNA from alignment at F-serratus_M_contig788:187021..191687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig788.19136.1 ID=mRNA_F-serratus_M_contig788.19136.1|Name=mRNA_F-serratus_M_contig788.19136.1|organism=Fucus serratus male|type=mRNA|length=4667bp|location=Sequence derived from alignment at F-serratus_M_contig788:187021..191687- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig788:187021..191687- >mRNA_F-serratus_M_contig788.19136.1 ID=mRNA_F-serratus_M_contig788.19136.1|Name=mRNA_F-serratus_M_contig788.19136.1|organism=Fucus serratus male|type=CDS|length=2166bp|location=Sequence derived from alignment at F-serratus_M_contig788:187021..191687- (Fucus serratus male)back to top |