mRNA_F-serratus_M_contig786.19131.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: D7FMI3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI3_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 1.670e-21 Identity = 52/75 (69.33%), Postives = 56/75 (74.67%), Query Frame = -2
Query: 183 IAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLRW 407
I AVGDSL HDILGALR + SVF+AGGVHFDEL V QG VPSDEAYSAAF+KHL G PT+VMP RW
Sbjct: 301 IVAVGDSLPHDILGALRAQLASVFVAGGVHFDELRVEQGGAGVPSDEAYSAAFSKHLEG---EGTPTHVMPAFRW 372
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 3.980e-13 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = -2
Query: 183 IAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLRW 407
+ AVGDSLDHDILGA R G+ S+FI GG+H +ELG+ +G + PS +A +A+H GG VPT+ MP W
Sbjct: 292 VCAVGDSLDHDILGASRAGIESIFIIGGIHSEELGIKEGGRECPSQKALEKLYARHGGG-----VPTHSMPAFVW 361
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A9V6S2_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6S2_MONBE) HSP 1 Score: 63.5 bits (153), Expect = 7.320e-9 Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = -2
Query: 186 STIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLR 413
S I AVGDSL HDI GAL+ G+ VF+ GGVH ELG+A G G P FA+ LG PT+V+P +
Sbjct: 233 SRIVAVGDSLHHDIEGALKAGLDCVFVTGGVHAPELGIAAGVGQAPDPARCEKLFAQVLGADRR---PTHVIPAFK 305
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: R1FGE1_EMIHU (Tentative p-Nitrophenyl phosphatase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FGE1_EMIHU) HSP 1 Score: 63.2 bits (152), Expect = 1.060e-8 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = -2
Query: 186 IAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDE---AYSAAFAKHLGGASMSSVPTYVMPGLR 407
+AAVGDSL HD+LGA +NG+ SVFI GGVH+ EL V Q A P+ + A A FA GG + PT+ + G R
Sbjct: 244 VAAVGDSLHHDVLGASQNGVDSVFICGGVHYRELEVPQAAAVPPAADKLAALLATFASEHGGCT----PTHALAGFR 316
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A8K1CP86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP86_PYTOL) HSP 1 Score: 62.0 bits (149), Expect = 2.670e-8 Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = -2
Query: 183 TLGPSTIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLRW 425
T S + +GDS+ HDI GA+ + SVFIAGG+H +EL V G G+ D ++ A G PTYV+PG RW
Sbjct: 238 TTDRSRVVHIGDSMHHDIQGAVNTEIDSVFIAGGIHGEELAVKLGPGEPEMDASHLTAIFTRYG-----IEPTYVVPGFRW 313
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: UPI0009F3B9B8 (uncharacterized protein LOC110093466 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3B9B8) HSP 1 Score: 61.2 bits (147), Expect = 5.140e-8 Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = -2
Query: 183 LGPSTIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLRW 422
L PS A+GDSL HDI GA G+ SVFI GG+H ELG+A +G P EA A +K+ + P+YV+P W
Sbjct: 248 LDPSDCVAIGDSLHHDIKGANNAGIESVFITGGIHAAELGLADLSGS-PETEALQALASKY------DAYPSYVLPSFSW 320
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A7S0J5S4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5S4_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 7.200e-8 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = -2
Query: 294 STIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQ 413
+ +AAVGDSL HD+LGA RNG+ SVF+ GGVH+ ELG+ Q
Sbjct: 149 AAVAAVGDSLHHDVLGAARNGVDSVFVCGGVHYQELGIPQ 188
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A0G4EGR2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EGR2_VITBC) HSP 1 Score: 60.8 bits (146), Expect = 8.310e-8 Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = -2
Query: 183 STIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVA-QGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLRW 413
S + AVGDSL HDILGA R G SVFIAGGVH+ ELG+ QG ++P +E A ++ A TY +P W
Sbjct: 327 SRVLAVGDSLPHDILGANREGYPSVFIAGGVHYCELGLGRQGGSEMPDEERLRAVLDEYDVSA------TYCLPSFVW 398
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A8J5XKT1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT1_DIALT) HSP 1 Score: 60.5 bits (145), Expect = 1.110e-7 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = -2
Query: 192 PSTIAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPG 416
P+ + AVGDS++HD+LGA R G+ ++ I GGVH ELGV QG + PS E +A ++ PT+V G
Sbjct: 312 PARVVAVGDSMEHDVLGARRAGLDAILITGGVHAAELGVRQGVAETPSAERLAAFLERY----PADEWPTHVCAG 382
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Match: A0A0M0JUP2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUP2_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 1.450e-7 Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = -2
Query: 186 IAAVGDSLDHDILGALRNGMGSVFIAGGVHFDELGVAQGAGDVPSDEAYSAAFAKHLGGASMSSVPTYVMPGLR 407
+AAVGDSL HD+LGA RNG+ S+ GVH ELGV Q AG +P A +H G PT+V+ R
Sbjct: 287 VAAVGDSLHHDVLGAARNGVDSILCCSGVHSTELGVPQ-AGALPPKPERLQALLEHFGREHEGVAPTHVLAAFR 359 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig786.19131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig786.19131.1 >prot_F-serratus_M_contig786.19131.1 ID=prot_F-serratus_M_contig786.19131.1|Name=mRNA_F-serratus_M_contig786.19131.1|organism=Fucus serratus male|type=polypeptide|length=102bp MTYVGTLDMLAPPKCFAKAAEYASSLGTSPAPCATPSSSKCTPPAMNTEPback to top mRNA from alignment at F-serratus_M_contig786:374002..374505+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig786.19131.1 ID=mRNA_F-serratus_M_contig786.19131.1|Name=mRNA_F-serratus_M_contig786.19131.1|organism=Fucus serratus male|type=mRNA|length=504bp|location=Sequence derived from alignment at F-serratus_M_contig786:374002..374505+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig786:374002..374505+ >mRNA_F-serratus_M_contig786.19131.1 ID=mRNA_F-serratus_M_contig786.19131.1|Name=mRNA_F-serratus_M_contig786.19131.1|organism=Fucus serratus male|type=CDS|length=612bp|location=Sequence derived from alignment at F-serratus_M_contig786:374002..374505+ (Fucus serratus male)back to top |