mRNA_F-serratus_M_contig786.19124.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig786.19124.1
Unique NamemRNA_F-serratus_M_contig786.19124.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig786.19124.1 vs. uniprot
Match: A0A6H5JK22_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK22_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.570e-8
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 3 
Query:  495 ADTDEETSRSWPDTEMGLPEQPPESPPLATRRTFSHYTQVRHNGYLTKRFKL 650
            ++ D   S SW DT       PP+SPPL  R+TFSHYTQVRHNGYLTKRFKL
Sbjct:    8 SEDDTAVSHSWADTI------PPDSPPLQRRKTFSHYTQVRHNGYLTKRFKL 53
[Close]
BLAST of mRNA_F-serratus_M_contig786.19124.1 vs. uniprot
Match: D8LCX9_ECTSI (Villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX9_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.700e-8
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 3 
Query:  495 ADTDEETSRSWPDTEMGLPEQPPESPPLATRRTFSHYTQVRHNGYLTKRFKL 650
            ++ D   S SW DT       PP+SPPL  R+TFSHYTQVRHNGYLTKRFKL
Sbjct:    8 SEDDTAVSHSWADTI------PPDSPPLQRRKTFSHYTQVRHNGYLTKRFKL 53
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig786.19124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK22_9PHAE1.570e-863.46PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCX9_ECTSI1.700e-863.46Villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig786contigF-serratus_M_contig786:216690..231169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score66.2
Seed ortholog evalue5.6e-09
Seed eggNOG ortholog2880.D8LCX9
Preferred nameFLII
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0001703,GO:0003674,GO:0003779,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005903,GO:0005912,GO:0005924,GO:0005925,GO:0006996,GO:0007010,GO:0007275,GO:0007369,GO:0007525,GO:0007527,GO:0008092,GO:0008150,GO:0009653,GO:0009790,GO:0009987,GO:0010004,GO:0010927,GO:0015630,GO:0016043,GO:0022607,GO:0030029,GO:0030036,GO:0030054,GO:0030055,GO:0030154,GO:0030239,GO:0031032,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032989,GO:0042692,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0048468,GO:0048598,GO:0048646,GO:0048856,GO:0048869,GO:0051014,GO:0051146,GO:0055001,GO:0055002,GO:0061061,GO:0070013,GO:0070161,GO:0070925,GO:0071840,GO:0097435,GO:0098862
EggNOG free text desc.actin filament severing
EggNOG OGsCOG4886@1,KOG0443@1,KOG0443@2759,KOG0444@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size651
Cds size174
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig786.19124.1prot_F-serratus_M_contig786.19124.1Fucus serratus malepolypeptideF-serratus_M_contig786 216690..230693 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932338.1869776-CDS-F-serratus_M_contig786:216689..2167281622932338.1869776-CDS-F-serratus_M_contig786:216689..216728Fucus serratus maleCDSF-serratus_M_contig786 216690..216728 -
1690964260.4514909-CDS-F-serratus_M_contig786:216689..2167281690964260.4514909-CDS-F-serratus_M_contig786:216689..216728Fucus serratus maleCDSF-serratus_M_contig786 216690..216728 -
1622932338.2053275-CDS-F-serratus_M_contig786:230558..2306931622932338.2053275-CDS-F-serratus_M_contig786:230558..230693Fucus serratus maleCDSF-serratus_M_contig786 230559..230693 -
1690964260.4635339-CDS-F-serratus_M_contig786:230558..2306931690964260.4635339-CDS-F-serratus_M_contig786:230558..230693Fucus serratus maleCDSF-serratus_M_contig786 230559..230693 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932338.2301848-UTR-F-serratus_M_contig786:230693..2311691622932338.2301848-UTR-F-serratus_M_contig786:230693..231169Fucus serratus maleUTRF-serratus_M_contig786 230694..231169 -
1690964260.4740844-UTR-F-serratus_M_contig786:230693..2311691690964260.4740844-UTR-F-serratus_M_contig786:230693..231169Fucus serratus maleUTRF-serratus_M_contig786 230694..231169 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig786.19124.1

>prot_F-serratus_M_contig786.19124.1 ID=prot_F-serratus_M_contig786.19124.1|Name=mRNA_F-serratus_M_contig786.19124.1|organism=Fucus serratus male|type=polypeptide|length=58bp
MTSGSEADTDEETSRSWPDTEMGLPEQPPESPPLATRRTFSHYTQVRHNG
YLTKRFKL
back to top

mRNA from alignment at F-serratus_M_contig786:216690..231169-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig786.19124.1 ID=mRNA_F-serratus_M_contig786.19124.1|Name=mRNA_F-serratus_M_contig786.19124.1|organism=Fucus serratus male|type=mRNA|length=14480bp|location=Sequence derived from alignment at F-serratus_M_contig786:216690..231169- (Fucus serratus male)
CTTATCTCCCATGATTTATATAAAACCTGTGGGAAATGAGTTTTCATAGT
TCCCAACAAATCTTGGAAGCGGGCGAGACGACTCTGGGATAGGAGTCTTT
CGTAAGACAGGAGCCCTTTCCACGGAGGCTTGAGAGGAGAGAAAAGGTTT
CGTTCAAGGTGACGAGCTGAAGTTGGCTTGTATCGGAAAAAAACTCCAGG
ACATTCGCTCAGCCAACGCTTTGGACATACTTGTTCTGAGTTGGTTCCCA
AACGAAAACAAAAAACAGCACAGGAGTAGGAGGCCATCAACATCATCCCA
GCGCTGCCCTGGTCCCCGAAGTAGTCATCTGAAGACATTGGCGATCACCT
GGTGTTTTGGCTTTTCTAGCTGGAGAGGAAAACGAGGGTCGGGTGGACTA
GCTGTCAAACGGCTCCAATTCGCTCCCCAAAGAGAGATCACCCGCCTTTG
GACGGACAAGTCCACGAATACCCATCATGACCTCGGGGAGCGAGGCAGAC
ACTGATGAAGAGACTTCGAGATCATGGCCCGATACGGAGATGGGACTGCC
GGAGCAGCCCCCGGAATCCCCCCCGCTGGCGACGCGAAGAACTTTCTCAC
ATTACACTCAGGTGGGTACGTACGGCTGTAACGGGGCGCGAAAATCGGTT
TGCCTCTTATCAAGGAAGCGGCCTCCTAGTATGTGGGAACGTAAACAGTT
TTTTCTATTTTATTTCCTTAATACTTACTGTATTACTACTGTCTGTCTGG
AAGCTCTATACCATTGATACGTCGGTGAAGAGCACCAGACGCACCTGACA
CGCGCTTGCTTTGATGATTGATGAAGCAAGCGCAGGTAGGCAACTAACTC
ACCGCAAGAGGTGTATCTGTTTCGTTCATGGGAGGATAATCGAACAAGCT
TGCTTGTTGACTTGTGATCTCGAGGTTAGTTCCCTTCTCCTCGTGGACAA
CCACAAAGTTGAAAAGAAAGTCGCACCCTCAAGGAACCCTGTTTTGCTCT
TTCTTCAATTATTATTATTGATAGACAGAACACTCTGTGGTTCATCCATC
CATCGACTACAGCTTCATTCTGAGAGCTTCACAACTTTGTACTGCTTCAT
TCTGAGAGCTGTACTAACTTTTTACTAATTATTAACTATTCAACTGCTGT
AGTCCTTGAGCAGTGACAAGTAACTCTGACTCTTTTACGGGAATGTATGT
AAATGCCTTATGGTCGTACATATAGCAAGAGTATGGATCAACCGGGTAAG
GTTGCCAGGCCTGCACGTGGTCAGCTGAACAGGAAAAATGAAGGGCAAAA
TGAATCAATGTTTCCCTGTCCGCGTTCGTGCCTGAAAATTTGTATGTAGG
TGCTGTAGCACACTAACCCAACCCTCAGATTAGTTTAAAAGAAAATCTGA
ACGCATCTAAACCTTCTGATCAGTCAAAAGGTTTAGGTGGGAACATTGGC
TGTAGGGACAGAAACCTCTACCAGGGTACATGGTATTAAAAGGGTTCAAC
AGTATATTATCGGGGAGACGCCTACCGTTATACTCTGTACACTGACATTA
GTTTAAAGAAAAACCAGAACGCACCTAGACCTTCTGATCCGCCCCCGGTA
GGGGGAAAAAAATCAAAACGTTTAGGTGGTATCATATCAGAGGCTGCAAA
TACAAAACCTCTTCATGGCATTTAAACGGGTTCCTCAATGCAGATAACAT
TGGGTCAACAGTATAATGTCAACCCACCGTTAAACTGTACCTGGTACACT
TACAATAATCGCCATGCAGGGACACCAGAAAAACAACAATACCAGAAAAA
CAGAAAACAAACAAAATAATGTAGTGACTCATCAGACATGGTGATAATAT
ACTTGTTACCTAGGTTATGGTGGTAATATATTTGTTACCCAGGTTATAAG
GGCAACAACATTACATATTATTTTAAACGGGTTCCCTAATGGTAGTAAAC
ATGTTGTTCAAGCCTGAGTCAAACGTTTGTAGGGCCTGGGCAAACCTAGG
TCAACCTAGTTGACAACGTGTGGCCTCGTTCTCTCTATTAATAAGAGCAC
CGAAGTCAAAATAATGATTAATCGCGGTAATCCATAATAATAACTTATAG
GTAGATACATTAATTATATTGATAGGGCAGGCAATAATATTGGAACAGTT
CGTTCGGCGAACCGCGAACCAACGGTGCGTTTTGTTTTTCTCTCTTGCAC
ACAGACAGCAGTACCCGAGGCCTTGCTATTATATGTTCTATTACTTGTGG
CCATGATACTGTAGCTTCAAGGGGGCCATAATATTTCGCTTTGATTGATT
GATTGATTGAATTCTCACATAAGCTGATGTCAAAAAACCCAGCCCGTGGT
CACAAGGTAGAAAACACCATTCGGAAGGAAAGAACGTACGACGTACTCTC
CATACAAAGAGAAAGCGGAAATGGTACAAGAAATACTCGAAAAAAGCGAC
ATCTCCAAAAATAGAAACACGTGGGGCTACCGGGGCGCCTGCATTCGAAG
GACGATTGAACGAAGGGCTGCGGCTTCAACGAAAGCATAGAGACAAAAAC
GAAGCAAAACAGAGCAAAACAAAGCAAAACAAAGCAAAACGAACGTAACA
CCAGAGAAAAAACGTCATGGCATCTACAAACAGAACGTCCGGAGGATACC
AGTTCGCGCCACTTGGGGCTAGTCAACAAGGGCGAGCGAACCAGCACGAG
CCCGCTTACTTTGGGCTATCCTCTTCTTGGTCCTTCCCGTCACGTTCGGG
CATACCACTGCGTGCCGTAGTCCAGCCTTGACTTTCTCGGCAGCGATCCA
TTTTGCCATGAAACGTTCCGCCCCTTGTTCTGCCGTTCTGCGCCACTTCC
CCTCGTCCTGGGCTGCAGTTGTCCACTGGTCGGCGTTGATGCCGAAAGCT
CTGAGATCGTCCAGGAAACACCCCATCCACTCTTTTTCCTGCCCCCACAC
AACCCGCGCCCCCACCATTTCGCCGAACATCACGCACTTCGGCAGTCTCG
TATCCTCCATGCGCGCCACAAATCCCGCAAACAAGATCCGCCTCCTGCGT
AACGTCGCCTCGATGCTCTCACTTCCCGTCTTGAGGAGCGTGTCCAGGTA
GGAAATCGGGTGGTCGGCGCGATTGTGCTTTCGCCAACCGATGCAGCGAG
TCAAGAACCTGTGGTGGGCTCGGCGCAGCGTGTCGTAGTGGCACGCGCGC
GGGCTCCACGTGACGCATCCGTACAGCATTGTCTCGAGTACCTCGGCTCT
TAGCATCCGGATTTTGAGCTCCAGGGGAGCGCTCGGTCGGTCGTACAGTT
CGAGGGTGTACTTCCGGAAGCTGCACCATGCGTTGCGTACGCGCCGGTCG
ACCTCGATGGACAGGTCGGCATTTCCGTTGATGTTTCCTCCGAGGTATAC
AAATTCGTTCGTCTGATTGTACACCTGGCCCGCTGCCTCTACGCTGAATG
TGGCGGTGGACTCCGGCATCCCCTTCGCGCGTAAACACATGATCTCAGTC
TTGGCCTCCGATACGGTGAGGCCAAACGCCGCGCACACGACCACGATCAC
CCCCATCATCTTCCTCAACTGCTCGGGTGATTGCGAGACGATTACAGCAG
CATCATTATTATATTAATGGTACAACACCGCGTCGCTCTGTAGCCGCGAT
GTTACGCGTCTCCAGCTTTACTGTTTTGCTGTATGTTATTCATCCAGCTG
GACCAAGACATAAAGAAGTGAACGTGTAGTCAAGTGCAGTCGTTTCTGTG
GTTCGAGTTGTCCTCTTTTTAAGGTTCTCTGTAAATAGGACAAGTATTCG
TTCCCGGTATGTTTTGGTGTAACTTCCTCTATCTTGTGACCACATCTGGA
CTCATAGCAGACCAGTTAATAATGTGAGATAAACAGTACCAGGTACATAG
TAGTACAACGGTGGGCTTCTCCCCGATATTATACTGTTGACCCAGTGGTA
CTACCATAGGGGAACCCGTTTGAATGCCATGAAGAGGTTTTGTATTTGCA
GCCTTGGAGCCGACCTGAACATTTTGACATTTTTTCCCCCTGACTGAGGG
ATGCTCAGAAGGTCTAGGTGCGTTCTGTATTTTCTTCAAACAAGGTGTTC
GATTGTGTGTTATTTGTTATTTTGGTGTTTTGCTTTTCATTTGTCTTCTA
TCTGTGATATAGGTGAGCCCGGTATGGATTCTGCTCCTCTTTCATTTTTG
GGTAGGTAACCCATCGCGATGCAAGCTGTATACCTCATCATTTTATTTCA
ATTGTTGTCTCCTCTTCCTCCATCTTTGTCTCTATTTCGCCGCGTGTCGC
ATTCGTTGCCCTTGCCTTTTGATGCCCGGGTTGTATTCCGCCGCTTATAG
GGCTGTTTTTCTTGCGTATGATAGCCTGTTGAGAAGCCTTTATGCTGTTG
CCCCTAGTTTGTTCCTACCGTCTGTGATTTTGTTTGTGTTTCCTATCTTC
TTATTTATAGCGACGATGTCCTTTGCTGACTACTTTCTTGTCCGTTGTCT
TCTACGTATATGCCTTTCCCTGCTTATCTCGGAAGGTATTGGCGGTTTTG
ATTTGGTTTGGTTCCGCCTATCTTGTGACCACGGCTGGATTCGTAGCGGA
TCAGTTAATGTGAGATAAACAACAAGCAACGCCTGTTGAGCGTCCAGGAA
CAAACCGACTCTAACCCCTCGACAAGAAGAGAAATGCTTTTGCGCCCTTA
AGACGTTGGAACAGAGTGCACAAAGTACTTGCTGTAAGTGCTGCTTGTTC
AAGAACACATCGGCTGTACCAGTATACGGTACGGTAGTATAGTACCCGTG
GTACCTGGCAGCAGAAGAACTGATGGTGTGTGCTCCCAAGACTTTGCCGC
AGAGTACACAATTACAGTAATACCAGTACAGTATACTTTACTATACCCTC
CGATCAGATCGGGGGGGGCTTTCTCGTCTGTTATTTTTTTTCTCCTCTCT
TTCTCTTCTTTTTTTTTTTTTTTTTTTTTGGTATGTAGCGATGGTATGGA
AAGGGAAGCCTGCATCTGTGACCACGGGCTCGAGAGATCGGACTTATGTG
CGGAAATAATAATAATAATAATAACCTACTGTTCTCATCTCATCTACAGT
ATTAATCTGTATCTCTACCGCTCTGTCCATGACAGTATGTATTTCAAGAA
AATTCTGAATGCATCTATCTACCTCTGAGCATCCCCCAGTCGGGGAAAAA
ATATCAAAACGTTTTTGTACGATTTCTCCGGAGTATATGGTACCGTATGT
GGGTCAGGAAAGAACCGTCTGTGGTGCCCTCCTGTATACCACTGTACTGT
ACTGTAAACACAAGTACGCTTGGCGAGCGCTGCAAGTATGCTACGGAGTA
CTGTTGTTGTTGTTGTTGTTTCTCATATTCAGCGCATTGGTTGCCAACCC
GAAGAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGTCTGCTGAAC
AGGGGAAAAAAAGTCTGGCAGGCAGCGCCCCCCCCCGTGCGCGCTGCTCG
TTCGGAGAAAAAAAATAAAAATCACGTGACGCATCCACGTGTCTAGGCGC
TACGCAAGTCCGTGTTACGCAGGTGGTCTCGGTCCGTCTCGCATCCGTGC
AAGGATTCCTACGACTCGTCAGCTAGGCCAATGGGTGTCGCTTCGCAAAA
CTCTACGCTTCCGTGTGCGCATCTATTGCAACTTTCCCAGTCTCGTTGCC
TCTCTCTTCTCCTGGGGATGTCTGGCCGCGTCTTCCTCTTCTTGCCTCCA
TGCGGCCATGAACCTCCGCCCACCCTCCGTTACCGCCTCAACCCAAGCCT
CAGCTTTTACCGCCATCGTTTCCCAACCCCCCGTTATGCCAAACGCCCAG
ATGTCGCTCTGTACACAGTCGGTCCATTCTTTCTCCTTCCCACCCCGTCC
TCTACGCACTGCGCCCTCAAGGTTTCCGAACATGATTCGCTTTGGTAACC
GCCCGCCGCTCATTCGGAGGAGCGTTCCCGCCCACAGAAGTCTTCTCGTG
CGCAACGTTGTCTCAATGCTCTCGCACCTGGTTATCGCAAGGGCGCGGTT
GTACGAGGTCATCCGGTGGTCTGGTCTCTTGCGCTGCGCTCCTATGATGC
GAAGCAAGACCCGGTGGTGTACGGTACGAAGTTTGGCGTAGTGTTCCTGT
CGGAGGCTCCACGTACTGCATCCATACAGAAAGGCTTCGATTGCTTCGGC
CTTTACCATCCGGGTCTTGAGAGAGAGCGCGACTTTCGGTTGGCCGTAGA
GCCCCCGTGAGTACCGTCTGATGCGCATCCAGCATGCGCGGGTCCGCCTG
GCGATTTCAACGGACATATCAGGGGTTTCGGTCACTGCGCCCCCTAGGTA
GGTGAAGGATTGTACCTGTTTGTAGATTTGCCCGGTTGCTTCGATTCGCA
CCATCGTCCGCGGTGTACGCGGTGGGGGCATACACATGGTCTCCGTCTTT
TTCGCCGACACGGTTAGCGCAAATGCTCGGCAAACTTCTACGATAACTTC
CATCATGTTGCGAGCCCCTGTGATGATCGCGAGACTATGCAGGCGTCATC
CGCGTACAACATGCCCCACACCGCACGGCGGGCGTAGTCCATAGCCGACT
CTGGCCCCATTGACGTCGAGGGCTCCTTCAGGTGCACCAGCTCGGCGAGG
ATGGCCGGTTCCTCATTGAATCTCTGGAGGACAGCGTTCAGCACGGCTGC
GAAGAAGATGTTGAACAGCAGCGGGGACAACACGCATCCTTGCCGTAGTC
CTTGCCCCACCTCAAACCAATCCGAACAGACGCCGTCATCAGGTCGCACA
CAAGCTCTCATGCCATCGTGAAATTGTCGGATGACTGCTATCATCTGCGG
TGGTACTCCGATGCGAGTGAGTACCTGCCACAGGAGGGTGCGGTCAACGG
TGTCGTAAGCTTTCTGGAGATCTACAAAACACATATGGAGGGACACTCCT
GCCTTTCTCCCAACTTCCTGCAGCCTGCGAACCACAAACATCATGTCCGT
GGTGGAGCGATTCGGTCGAAACCCGCACTGCTCCTCCGGTAACAGTCCCT
TCGCCTCACAGTAAGCGCCGAGTCTCCTGGCAACCACTTTAAGAAGAACC
TTACCCGCGTGTGACACGAGCGAAATACTGTATACTATTATAAAGTATAA
GTACTCGTATCAGCAGAGTAGAGAACTGTAGTCGAGCTTCTTTGCCAAAC
GTCGGGGAGAAGCCCATCGTTGTACAGGTACAGTAGGTGCATTAATAGGA
TTAGGTCTAGGTGTAGTACGGTGCATCTGTTCACGTAAACCAGTCGCCTT
GGAGGGACACCCAGAGTCAAATTTCTTGAAATCATATTTGAACCAGGCGT
GTACCTGATTTATTAAGAAGCCTCTCTCTCGATCTAGATACAACAGGAAT
AGTTAGCCTTTGATGCCACCTATACCTTTGATTTTTTTCCCCCTGCGGGG
GGCGGATCAGAATTGATGCCACCTGCCAGGTATACCTTTGTGCATTCAGA
TCATTCTTCAAATAGTTATTGGGCAATTTTCCATCATTTCTATATGCATG
CCTTGTAGATTTCCTTCATCGACACCCATCCTACAGTATCCTAGACCTAT
TAACCTATTAATAATGTAACAAATTGAGCTGTAATCCAAGTTCATCGTGA
CTTTTGTCTTTGTTTTGTTTGGTTTCCCTGCATTTTATATGGCGATTAAT
GTAAGTGTATAGTACGGTCGCCCCGGTAGCTCAGAGGTAACCTGGTAACC
TTCAGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTC
ACCAAAAAAACTACTAAAAAACAAGACAAAACAAAATAAAAATACCCAAC
GGGTGGAGAACGATTAATTAAACCGTTAGTACACAAAATTCGACTTCAAG
GTTGACGAGGGAAAGGAATGGTGGCTGAATCCTTCTCGCGATAAAAAGTA
AGGCGCTCACCGCAGAAACCGCAGAAGGAAGGTGGATGAAAAATCCTGTG
TGACCTTCCTCCTGTGTGACCCCGGCTGCTACGTCCAACGAACTTGATGC
CCAGAAAAGAAGGGAAGAAAACACACACAAACACACACACATAGTACTCC
GTATAACGGTGAATTTCTCCCCGATATCACCGTAAGTAATACTTTCCAGG
CTCGATTGCTCCACAACCAAGATGATGTGAACATCGAACGATACGCCTAA
AGAAAGCTCTTGACGAGATCTTTTGAAAACCGTCCTTTTCGGCATTGTCA
CCTTATAACCCTCTTGGTTGTGGAGCAATCGAGCCTGGAAAGTCAGTCTA
GGGGGTGTGCCAAGACTCCGATACTTGCGTACTGTTGACCCAACGTTACT
ACCACCGGGGAGCCTGATTAAATGCCATTAGACCATCTTTTATGGGCATC
GTATTTGGGGTATATGATATCGGAATTGGATCTGGGAATTTGGGGACCTC
AAATCCGATAGTCCTATTTTATGGAGTAGTACTTGGCCAAGTACGATAAT
CTCAAATCCCAGATATATATTTTTCCCCTCGACTCCATCGTATTTGGAAC
CCATCGAGGACAATCGTATTTGCTGTTTTCGATTTGACTTGTAGGCGTGT
GCATTTGAGAGTACGGAGTTACCATCAAGCATAGCTGTAAACCCAGCACA
CCTCCCATCAAGGCAGAGAGGGCTGTCCTCGGCACACAGCACTTTGAGCA
TCTACACAACGCGTCGGTTGCTCTCATGGCGTCGGACGACCGCGATGAAC
GCCTCTGGGGAGCGCTCGCTGTAGCTATGGTTGTGTTCTTAACCTACAAG
AAACGGCGATGAGCCAGGACCTTGGCCGAGTATGGAGACGACGGAGGGAG
AAGAGAGCGAGGATGGCTATGGTTCCCGAGTCAAACGTACTCGGCGAGTC
CACCCACGATCAGATTTCTCGAGATGGTCTAATGCTCAGAAAACTAGAGC
TGGAACAACGCAACTCCCAGAGTACATAAAGTTTCGCAGACGTTTTCGCT
TCCCGTACGAGTTCTTGGAGCTTGTTCTAATTGGCTGGCAAAGCACCGAA
AGTGGTTCTCATTGGCTGCGAGGGACGTGGCATGGAGGCAGCGTCTACCT
GTAGCGCTGAAGGACGGTCAAAGTTGTTGCTATTTCTGCTAAAAATGCGA
TGCGTATGGTTTGGGTTTGAGACGACTCCCAAGTATAGACAGAAGACCGT
ACTGTACTACAAACGGTATACTGTACTATACTGTAATACAGTATATAGAC
CGTACTGGCCTGTGCAGACATTCCGGTACAACGTGTATTTGGTTTAAATC
TGAAGGACGAGTTTTGTGTTGTTGTAACCCATCGTTCTTCGCGAAAAACA
GAGACTCGAGCACGATGGCGATGGTACCTCTTTTGTATGATGATCCACTC
TCAAGTTGCCGTGCTGCTACCTGTTGGCGAGGCGCGTGCGACGCATTTAT
GTATTTTGAAAGCAGGCGGCTAGAAAAATGCACACACGCCGTTCAAATCG
TTGCATATCTCCCATGTCCCATAAAATAGACAGATTGGATTTGGGCTCCG
CATTTGTACGATCCGCGAGAAAAGCACCAGATCCAAAAATATTCCAGATT
CCAATTCCGATGCCCATAAAATATGGTCTTAAGAAGTTTTCACGTATTTG
CGGCCTATGATCCCACCTAAACGTTTTGAAATTTTTCTCCCCTAAATGAG
AAGTGTTCAGAAGGTCTACATTTGTAGTAGCGTTCATATTTTTCTTTAAA
CGATCCTAAACGTTTTGACACTTTTCCACCTGATTTGGGTATAGGATGCT
CAGTAGGTCTAGATGCGTTCAGATTTTTCTTGAACCAGTATTCGTACAGA
GTACTTTACTGTTTTTGTACTTCCAGTACATGAAAGACAAGACTACTGAC
TACTTTTTGACATCGGTGGTTTTTGTGTCTTCGCGTGCAGGTTAGGTACC
TGGTGAGATTTTAGTTTGGTACGAACAAGCGCTCAACACCAACGGTTAGA
GACGAAGTAGGCGTATACTACTTGGGGGGATGTAAACAGTATACTGTAAA
ATGACTGATCATGGTGGCTGGCCCATGTAAAGTAGCGCGAGCAGCACAGG
ACTGTCAAGAAAAAAATGAAAAAAAACTTTGTCAGACCGATAGTACCAAA
AGGGTTTATACTTGTAGACCAATGAAAAAATACCTGATACTCCGGTATAC
GATGGTATTTCCATAGGTACTGCACGTGATACGTACAAGGCAGGATGTAC
TCTATGTAATGGGAGCTTGTACAGCACGCCATGCCAGCCGAAACTTTTTC
ATAGTGATTGATATCTTACCTTAGGGCCTGTATTAACGATGTTCGGAAAA
TCAAAATCGGAACATCAAAAAGCAAAAAGCAAAGATTGATTTGCAGAAAA
ACACTGCGAGTCACATTAACGGAAAATAGTCGAACGGGCTATTAACGCCG
CCAGTATGTAAAACCTCTCGGCGTTGGAAAAACAATTTTACACCACACAG
CAAGTAGTAGCAGTACTACTGCTGTACTGCTGTCTCTCTCGCCAATCGTG
CATCCTCCTCGTAGCCCAAGGACCAAGCGTCTTTGTCGTTTGCTTAGAGT
GACGACTGCGAGGTCGTCGCTGTTGATGGACTTTCTCAACGTAATGGACA
GTTCACAGCGTGTGTGGCGGGCTTCGACCTCGTTGTAGTTTACCTTTTGT
GCTTTCGACGTGCGGGCGGACAGTACTCGCTTCTAATGTAATAAAAGAGA
GGAACAGCAGCAGTAGAACTACTGGTACATAGTACACATACGAAGTCTAT
CTGTGCTAAGGTATTAGACGATGCAGTGCGTATGTGTGGAGGCTACAACC
ATCATCGCATGCGTTATTTCACAAGCCGGTCTACAGCAGTACCGTACATG
ACAGACAGCAACACACGAGTTGTATAAAACAGATGTGTTATGTGTGCTGT
GACGCGGCCCCCGTGTTTCAAGTCTACCTCGAGCCTGATTTTTTCCAAAG
TTCAGAACCCGTCGCCTTTCGGGTTGTATCGGCGTCTCCAAAGTTCAACA
CCACTCGTTGCACCTGTCCCCACCACCAGCTGGGAGAGGTAACAATTCCT
TCTCGCCGTGAGACCGTTGGCGTGGGCCATGCCAGCAGAAGTTGTGTGTA
TGGTATGGCGGACGGTGCAGTCTCTCTACGTGCTGCTGTTGTTGTAAAAA
TTGCTGTGCTCTGTTGGCGTGTAGCATTCGGAAAGCCTTCGATCAGGTGA
ACACCTCCAATGTTTATTTTCCTAAAAATAAACATTAAGTCCCTGGGGAC
TTCTTTGGTTTGGCAGCGATTTCCAAAAAATAAACTGGCGTAGTCGGGAG
GTTTTAAGACCTCGACCAATCAGAGCCCAATTTTGATTTTGTTTTTTTCC
GATTTTGATTTTCCGAACATCGTTAATACAGGCCCTTACCTTACCTTGTA
CAGTGCAGAAAACAAACCCGACTTCGTCGCATCCTTATTGATATGTAGTG
TGCGCCATTGGTACGCAATTGTGACCCGATAAACTCGGGACTGACCCAAT
GGCGTGTGGTGATTCAAATAAATAAATGGACTCCGCCGCGGAAATCGGGA
GGAATCCCGTGAGTAAGCACCAGATTCAGCCTGAGTATGGGGATGAGGAG
GCTAACGCGGGACGAAAAGGCTGAACCCGTCTCGTGAGACCAAATTCTCA
GGCACGTACGGGGACAGGGGAATATTCATTTTCCCTGTTCAACTGACCGC
GAGCAGGATTGGCAACCTATGCGATCGGTTCATACTCTACTATATGTGAT
AACAATACATACATATATACATAAATACATACATACACATAGTCGCCCCG
GTAGCTTAGAGGTACCTCGTAACCTTCCTGACACGTTGGGACGTGAGTTC
GATCCCGGCAAACGGGATTTTTCTCACTAAAAACTAAAAACCAAAATAAA
AATGCCCAACGGGTGAAGAACGATTAATTCGTTAGTACACAAAATTCGAC
GTCACGATCGACGAGGGAAAGGAAAGGCCGAATCCTTCTCGCTATAAAAA
TTAAGGCACGCACCTCAGAAAGAAGATGGATGAGAAATCCTGTGTGACCT
TCCTCCTGTGTGACCCCGGCTGGTACGTCCATTGTTGTCCAGAATGGATG
GGAAGAAAACACACACAAACACACACACATACATAAGGTCCAGTCAGAAT
GCTTATCCTACTCCACGGCAGTAGGCATCGCAATTGTTCAGGTCGAGTCA
CGGCACTTGAAATCTGCTACCCGACGTCTATGTAACCCCAAAAACCTTCT
GTAACAATTCACAGCAACACTCGGTAATAATTACAGTACAGGATTCTAGG
ATCTTGTCTACCAGTACAACTGTAGCTCCTCCCCTCTCTTGTTGATAGGT
CAGTCACCTTCACCTTCACCTTCGCCTTTCCTTTTCTCAATTCTATTTTA
TATTACTATTAAAATTACGATCTGTTTTCTTCTGTTGTTTGTTCTCTCTC
GATACCATCACTGCGGTCACGAAGGACGAAGGAAACGACCGATTGCCGTT
CGACTCTATACATACAAAAACATACATGTTTTCGTAATTGATTGATTGAT
TGAATTCTCACATAAGCTGATGTAAAAAAACCCAGCCCGTGGTCACAAGG
TAGAAAACACCATTCGGAAGGAAAGAACGTACGACGTACTCTCCATACAA
AGAGAAAGCGGAAATGGTACAAGAAATACTCGAAAAAAGCGACATCTCCA
AAAAATAGAAACACGTGTGGCTACCGGGGCGCCTGCATTCGAAGGACGAT
TGAACGAAGGGCTGCGGCTTCAACGAAAGCATAGAGACAAAAACGAAGCA
AAACAAAGCAAAACGAACGTAACACCAGAGAAAAAACGTCATGGCATCTA
CAAACAGAACGTCCGGAGGATACCAGTTCGCGCCACTTGGGGCTAGTCAA
CAAGGGCGAGCGAACCAGCACGAGCCCGCTTACTTTGGGCTATCCTGTTC
TTGGTCCTTCCCGTCACGTTCGGGCATACCACTGCGTGCCGTAGTCCAGC
CTTGACTTTCTCGGCAGCGATCCATTTTGCCATGAAACGTTCCGCCCCTT
GTTCTGCCGTTCTGCGCCATTTCCCCTCGTCCTGGGCTGCAGTTGTCCAC
TGATAAATTTCATTGATCCCCCCTTGGGAGGATCAATACGAGTGGCATAG
AATGACTAGGATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAA
ATATACATACATACATACATACATACATACATACATATGTACGAGTGGCA
TAGAATGACTAGGATGACAGGGCCGGATTGCGCGGTTATGTGCAATTCAA
TAAATATACATACATACATACATACATACATACATACATACATACATACA
TAGATTGCGCGGTTATGTGCAATTTAATAAATATACATACATACATACAT
ACATACATACATACATATATACATGGTTTTCGTAATAAGTTTCATTGATC
CCCCCTTGGGAGGATCAATACGAGTGGCATAGAATGACTAGAATGACAGG
GCCGGATTGCGCGGTTATGTGCAATTTAATAAATATACATACATATATAC
ATACATACATACATACATACATACATACATACATACGAGTCTATGGCTGC
GCGCAAGGGTTGCTGTTGCGTCACGCTATGAATCTGGTTGCTATTTACGG
CGACTTATAATGGCGGACCCTGTCTGTCGTTTTTGTTTCCACTTTTAAGG
TCGTACCCACAGCGTGCTTTGCGTTCGCCCTATCCTGTGGCGTTGGGTCA
TCCGACCTGTTCCTTGATACTGTAGAAGTTGTGGGCATTGATCACCTTAT
GGGACTGAGCGCCTCTGGATACCTTGCCTTGCATCCGACGCTATGGAGAA
GGAAAGCTCACCACCCGACGGCGTTTTACAAGGCCCAAGCGTTGAGAATG
TCGCTGCGAGTGCTTCAAAAAGCCCGTCCGTAACCGAAAACGCACTTGTC
TTGCAGTATTGTGTCGATTTATTTGTAGAAGGCTTACGGCTCCATACGAC
GCGTGGGTCTCCTGCAGTGCCCCCCCCTCCCCAAGGGTACCAGTTAGCCC
GTAGTTTCGGTAAGAAAGTCAAATCAGTTGATAATCGACTCCATCGCTCG
CTACCTGATTGGTTGAGGCTTTTTTTTTGTCGCTGAAACCGACTGCTGGA
GGAGAGCACATGCACCGTTTCAAGCAAGCTGGAACCGTTCGCATTTTCAG
CGAGGCGCGGGTGTATCTCCAAGAGGCACCTCGCGGTTTTAATTTGCTTT
ACGACGGCGACGTGAACATGGTACATATTTTGAAACCGTACTAAAATAAT
CGAGTTGCGTACGAGTACAAAAAATGTGGCAAAAGCTGTCGCGTTTATAC
TCCATTCCCGCACGTTTCTGTCGCCGCTTGTGCACCCCCAGGTCCGGCAT
AACGGATACCTGACGAAGCGCTTCAAGCTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig786:216690..231169-

>mRNA_F-serratus_M_contig786.19124.1 ID=mRNA_F-serratus_M_contig786.19124.1|Name=mRNA_F-serratus_M_contig786.19124.1|organism=Fucus serratus male|type=CDS|length=348bp|location=Sequence derived from alignment at F-serratus_M_contig786:216690..231169- (Fucus serratus male)
ATGACCTCGGGGAGCGAGGCAGACACTGATGAAGAGACTTCGAGATCATG
GCCCGATACGGAGATGGGACTGCCGGAGCAGCCCCCGGAATCCCCCCCGC
TGGCGACGCGAAGAACTTTCTCACATTACACTCAGATGACCTCGGGGAGC
GAGGCAGACACTGATGAAGAGACTTCGAGATCATGGCCCGATACGGAGAT
GGGACTGCCGGAGCAGCCCCCGGAATCCCCCCCGCTGGCGACGCGAAGAA
CTTTCTCACATTACACTCAGGTCCGGCATAACGGATACCTGACGAAGCGC
TTCAAGCTGGTCCGGCATAACGGATACCTGACGAAGCGCTTCAAGCTG
back to top