mRNA_F-serratus_M_contig786.19116.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: D8LCZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ2_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 2.460e-163 Identity = 313/586 (53.41%), Postives = 368/586 (62.80%), Query Frame = 2
Query: 335 MGDKAALFAGRTGDKSSTKRSAVSNTRANSSPRPPSTLEGHRETKRTPSGGRGSAARGVAASTQRRELQAKEAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAGDDEGTENRVIVASGAPSGTLGDARARLGALKEKYGGADSSSTES---------------------------------PITAPLSSSTSTLPAPPPPTALPSTPKQSESASVLGSGTPLLQAGDDDQGRNTLFFGA-RGRLPGRKTSTVGA-----------AAGAS------------TELVSRGGEDQEANEGDVDLGLSDLEASLRGVGEGEDDDLEALIEAARIEAEAFGL 1921
M DK +LFAGRTGDK++ SA N P G E K PS G+ +GVAA+ QRR++Q KEAE+Y KQANK L KT+TRWNPDFFSAAPLFEKAGACYRAAGED KAT+MFMQAG+CQ H+SVMAHASAAKDFREAALITERQGR++EAAA Y+RCAE W+HADE GRAA+Y GRSAKLV+D DE AA + ++ ASK+MVP GSD+++NF RV+G EVLVQ I FLASTNRL++ M+V+ RY IIL+AE +EHSL RMYLTYCILALA GDYVRAD AFR+ HLQSTAYL SEECRVEEELL A +D RPDLL +AQ +RTL RLE IVR+AKSLR+ GD++ + +I A PSGT+G A+AR ALKEKYG P A SS P P T +Q+ G+G QA D+D R LF G R P T++ AAG++ E + G D E VDLGL DLEASL G LEA+IEAAR EAE L
Sbjct: 1 MADKKSLFAGRTGDKTAKLSSAPKKRSGNVMP----AASGSGEEKAPPSFGKSGFGKGVAATQQRRDVQVKEAEEYLKQANKMLTKTLTRWNPDFFSAAPLFEKAGACYRAAGEDGKATAMFMQAGDCQCHDSVMAHASAAKDFREAALITERQGRREEAAAFYMRCAEAWMHADEPGRAAEYFGRSAKLVKDSDEDAAAERFVTASKVMVPNGSDSRSNFTRVVGSVEVLVQAIIFLASTNRLEQSMEVLSRYVIILEAEGMEHSLGRMYLTYCILALALGDYVRADMAFRNVHLQSTAYLRSEECRVEEELLIAFKDSRPDLLMEAQKDRTLHRLETAIVRIAKSLRVPGDEDDEDEDIIPARETPSGTIGAAQARAQALKEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVASPSSGA------PGPANSKGTSEQAWRTESDGAGKASPQASDEDSARGALFGGGPRKAKPSPPTASPAXXXXXXXXXXXXAAGSAWPSGAPKACPIIPETSADGPGDAE-----VDLGLGDLEASLGTGGXXXXXXLEAMIEAARREAEGLAL 571
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A836CBL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL3_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.630e-60 Identity = 136/350 (38.86%), Postives = 197/350 (56.29%), Query Frame = 2
Query: 551 AEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDT-KTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRV----------------------------------EEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAGDDEGTENRVIVASGAPS-----GTLGDARARLGAL 1480
A++ R A K + KT +W DFF+AAPLFE+A A YRA G++ A + QAGECQ + A AA+D+REAA + +A ++ A W++ E G+A +YLG++A+++E DE A + Y A+ M+P G + T+F++++G E L +RFL RLD+ + V+ RYCI L++E H+L R++LT ++ LA+GDYV ADAA+RD HLQ + YL + EC+V EE+LLTA ++Y DLL + Q +R L RL+ P VRLA++L I G + T N A+ A S G L DARAR+ AL
Sbjct: 79 ADEARAAAAKLITKTWKQWTCDFFAAAPLFERAAAAYRACGQEEAALMAYAQAGECQDENA--AWPLAARDYREAAQLALTCRADAKAVEMFKAAATSWMNGAEPGKAGEYLGKAAQVLEGIDEDRAAEEYKAAADAMIPEGVNPYTTDFIKIVGARETLDAALRFLLGARRLDDALHVLRRYCIFLESERATHTLHRLFLTEAVVLLARGDYVAADAAYRDAHLQDSEYLRAPECKVRHWRKLAAFEVGVVXXXXXXXXXXXXXXXXXXXXEEDLLTAFKNYDADLLAETQRSRALLRLDAPAVRLAQALTIDGMGDMTANVASAAAAAASKGPQLGNLSDARARIAAL 426
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A7S1U2H6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2H6_9STRA) HSP 1 Score: 110 bits (275), Expect = 9.860e-23 Identity = 91/295 (30.85%), Postives = 152/295 (51.53%), Query Frame = 2
Query: 524 QRRELQAKEAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGR---AADYLGRSAKLVEDEDERAATDHYIKASKIMVPP---GSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
QR E +A+ ++Y K+ K LQ T+TRW PD FSA FE+A Y+AA E ++A + ++ A QS++ +A K F AA +TE G ++EAA LY A + D GR +YL ++A + A D +A ++ VP G+D + + + F +LDE M + R+ ++ + + + + L+ ++ LA + A + F ++HLQ + YL S++C VEE+LLT +++ P+ LE+A+ R L+ L +VR +L + G
Sbjct: 37 QRAEKKAEADKEY-KRGMKYLQTTLTRWKPDHFSAVTYFERAARFYKAADEHDEARNTYLTAA--QSYKESEDFGNAVKAFANAADLTEALGNEEEAAKLYREAA--FCAVDSGGRFDHPEEYLMKAALAMAGTSISKAVDIAKEAVEVAVPSSALGADGG-GYQPTTKALDCIRNAYAFFCEYGKLDEAMALGPRFEVVCSWAQQDLTWRQFKLSCTVITLATAGFESAWSLF-EKHLQDSDYLRSDQCAVEEKLLTTFKNFDPEALEEAKRARQLQALNPFVVRSLATLTLEG 324
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A8K1CI65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI65_PYTOL) HSP 1 Score: 110 bits (275), Expect = 3.670e-22 Identity = 88/298 (29.53%), Postives = 147/298 (49.33%), Query Frame = 2
Query: 533 ELQAKEAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAAL------------YLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
E + KEA+++ KQANK ++KTM RW PD+ +AAPL EKA YRAAG+ +A + + QA Q+ + AA++ A I +Q ++ AA Y + E G+AAD L + A + ED + Y++A +M G K +F ++ + +L E + +++R I + +++ + YLT +L L GD AD + + LQS ++L S+EC + E+L+ A ++ +LL++ + L+N I +LA+ L I G
Sbjct: 6 EKKRKEADEHMKQANKLMEKTMFRWQPDYLAAAPLIEKAADAYRAAGDYERAKAAYAQAALVQNKS--RSPFRAAQNCENGAKIVVQQIKETRAAGPQKDKYLAELKKNYEAACGYYSDMGELGKAADALVKGAVVCEDNGVADVKELYLRACSLMEAQG---KPHFA-----VDIFKKTFTYLVKKELYKESLSLLKRQVAIYTEIDQRNNIHKCYLTEIVLLLTLGDVAAADQQYMAQ-LQSDSFLSSDECALTEDLVRAFKNGNEELLQETIRKQGFSFLDNQIGKLARKLSIYG 292
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A668A007_9TELE (Gamma-soluble NSF attachment protein-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668A007_9TELE) HSP 1 Score: 84.7 bits (208), Expect = 3.270e-14 Identity = 73/281 (25.98%), Postives = 128/281 (45.55%), Query Frame = 2
Query: 548 EAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
EA ++ +A KCL+ ++T+W PD+ SAA + KA C++ A + ++A +++ E + + HA+ A + + R + EA + M++ AA L R+ KL+E + A D Y KA+ + N R+ E+L + R L RLDE +++ + + E + ++ L +GDYV AD R+ + Y SE+ E LL + D + + N+ L+ ++N +LA SLR+ G
Sbjct: 8 EAHEHITKAEKCLKTSLTKWKPDYDSAASEYAKAAVCFKNAKQFDQAKDAYLKEAEYHTENKALFHAAKAIEQAGMMMKVSRTPKMPEAIQYIEKACMMYMENGTPDTAAMALDRAGKLIEPINLDKAVDLYQKAAGVF--------ENEDRLRQAAELLGKASRLLVRLKRLDEAAVALQKEKNMYKEIENFPMCFKKTTAQVLIHLHRGDYVAADKCVRESY-SLPGYSGSEDSVAMETLLQGYDEQDEDQVYRVCNSPLLKYMDNDYAKLAISLRVPG 279
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A812VVG4_SYMMI (SnpC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VVG4_SYMMI) HSP 1 Score: 81.3 bits (199), Expect = 3.510e-13 Identity = 64/213 (30.05%), Postives = 105/213 (49.30%), Query Frame = 2
Query: 791 RQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVR--------VIGGCEVLVQGIRFLASTNRLD---------ECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSL 1378
+QG + +AA ++ R A +W + E + ++L ++AK +ED D A D+Y + ++P DT T+ + ++ + +R + N D E + R + + E E SL RM +T IL L GD V AD F D HL S+AYL S EC++ E+ L A + DLL++AQ + L L+ + ++A +L
Sbjct: 1 QQGDRRQAATIFHRSAMLWGVSGEVTKTGEFLIKAAKELEDVDPAQARDYYYEGLGHIIP--EDTPTDMMSSTPALAPDMLRAAFSFLLKLRASSPDNARDPSRYTVPTQEVLSFAARMLRVYEGLESEASLCRMMVTITILQLELGDVVAADRTFLD-HLGSSAYLKSVECKLAEDFLQAFKQMDVDLLDEAQRSHHLIHLDRDVQKIAATL 210
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: UPI001C09C627 (N-ethylmaleimide-sensitive factor attachment protein, gamma b isoform X1 n=2 Tax=Alosa TaxID=34772 RepID=UPI001C09C627) HSP 1 Score: 78.6 bits (192), Expect = 3.760e-12 Identity = 72/281 (25.62%), Postives = 124/281 (44.13%), Query Frame = 2
Query: 548 EAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
EA ++ +A KCL+ +MT+W PDF SAA + KA ++ A + ++A +++ E + + HA AK V AG A L R+ KL+E D A D Y KA+ + +T+ R+ E+L + R L +LD+ +++ + + E + + ++ L +GD+V AD R+ + Y +SE+C E LL + D + + N+ L+ ++N +LA SLR+ G
Sbjct: 8 EAHEHIAKAEKCLKTSMTKWKPDFDSAATEYSKAAVAFKHAKQFDQAKEAYLKEAEYHTENKALFHA--AKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENGTAGTAGIALDRAGKLMEPMDLEKAVDLYQKAAYVF-----ETED---RLTQAAEMLGKASRLLVRLRKLDDAAASLQKEKTMYKDLENYPTCFKKTTAQVLIHLHRGDFVAADKCVRESY-SFPGYNNSEDCVAMETLLQGYDEQDEDQVHRVCNSPLLKYMDNDYAKLAISLRVPG 277
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A8C4IUT1_DICLA (N-ethylmaleimide-sensitive factor attachment protein, gamma b n=2 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4IUT1_DICLA) HSP 1 Score: 76.6 bits (187), Expect = 1.220e-11 Identity = 67/270 (24.81%), Postives = 118/270 (43.70%), Query Frame = 2
Query: 548 EAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPI 1357
EA ++ +A KCL+ +MT+W PD+ SAA + KA C++ A + +A +++ E + +A ++ + Q + EA + M++ AA L R+ KL+E + A D Y KA+ + N R+ E+L + R L RLDE + + + + E + ++ L +GDYV AD R+ + Y SE+C E LL + D + + N+ L+ ++N +
Sbjct: 8 EAHEHIAKAEKCLKTSMTKWKPDYDSAASEYAKAAVCFKNAKQYEQAKDAYLKEAENHTENKTYPLVCVCVAIEQAGMMMKEQKKMPEAIQYIEKACMMYMENGTPDTAAMALDRAGKLIEPINLEKAVDLYQKAAGVF--------ENEDRLRQAVELLGKASRLLVRLRRLDEAAVALLKEKNMYKEIENFPMCFKKTTAQVLIHLHRGDYVAADKCVRESY-SLPGYSGSEDCIAMETLLQGYDEQDEDQVYRVCNSPLLKYMDNDV 268
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A3B3S6N1_9TELE (NSF attachment protein gamma n=4 Tax=Teleostei TaxID=32443 RepID=A0A3B3S6N1_9TELE) HSP 1 Score: 74.3 bits (181), Expect = 9.730e-11 Identity = 69/286 (24.13%), Postives = 129/286 (45.10%), Query Frame = 2
Query: 548 EAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESV-----MAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
EA ++ +A KCL+ ++T+W PD+ SAA + KA ++ A + +A +++ E + + A + ALI + R EA + + M+V AA L R+ KL+E + A D Y KA+ + N R+ E+L + R L RLDE + + + + E + + + ++ L + D+V AD R+ + + SE+C E+LL + D++ + ++ L+ ++N +LA +L++ G
Sbjct: 8 EAHEHIAKAEKCLKTSLTKWKPDYDSAASEYSKAAVAFKNAKQFEQAKDAYVKEAEYHTENKAFFFRALEQAGMMMKVSKMALIDMK--RMPEAIQYIEKASMMYVENGTPDTAAMALDRAGKLIEPVNVEKAIDLYKKAASVF--------ENEDRLRQAAELLGKSSRLLVRLRRLDEAAASIHKEKNMYKEIENYPTCFKKTIAQVLVHLHRNDFVAADKCVRESY-SIPGFSGSEDCVAMEQLLQGYDEQDEDVVNRVCSSPLLKYMDNDYAKLAVTLKVPG 282
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Match: A0A672G6Y6_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672G6Y6_SALFA) HSP 1 Score: 73.6 bits (179), Expect = 1.590e-10 Identity = 73/281 (25.98%), Postives = 122/281 (43.42%), Query Frame = 2
Query: 548 EAEDYRKQANKCLQKTMTRWNPDFFSAAPLFEKAGACYRAAGEDNKATSMFMQAGECQSHESVMAHASAAKDFREAALITERQGRKDEAAALYLRCAEMWVHADEAGRAADYLGRSAKLVEDEDERAATDHYIKASKIMVPPGSDTKTNFVRVIGGCEVLVQGIRFLASTNRLDECMQVVERYCIILQAEEIEHSLARMYLTYCILALAKGDYVRADAAFRDEHLQSTAYLHSEECRVEEELLTAVRDYRPDLLEQAQNNRTLRRLENPIVRLAKSLRIAG 1390
EA ++ +A KCL+ ++T+W PDF SAA + KAG G + S+ S + ++A ++ + Q + EA + M++ AA L R+ KL+E + A D Y KA+ + N R+ E+L + R L RLDE +++ + + E + ++ L +GDYV AD R+ + Y SE+C E LL + D + + N+ L+ ++N +LA SLR+ G
Sbjct: 8 EAHEHIAKAEKCLKTSLTKWKPDFDSAASEYAKAGESRPVRGRGDLWESL--------SSDLLLAVFQLCAGLTAGFVLLQEQKKMPEAIQYIEKACMMYMENGTPDTAAMALDRAGKLIEPINLEKAVDLYQKAAGVF--------ENEDRLRQAVELLGKASRLLVRLKRLDEAAVALQKEKNMYKEIENFPMCFKKTTAQVLVHLHRGDYVAADKCVRESY-SLPGYSGSEDCVAMETLLQGYDEQDEDQVYRVCNSPLLKYMDNDYAKLAISLRVPG 271 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig786.19116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig786.19116.1 >prot_F-serratus_M_contig786.19116.1 ID=prot_F-serratus_M_contig786.19116.1|Name=mRNA_F-serratus_M_contig786.19116.1|organism=Fucus serratus male|type=polypeptide|length=550bp MGDKAALFAGRTGDKSSTKRSAVSNTRANSSPRPPSTLEGHRETKRTPSGback to top mRNA from alignment at F-serratus_M_contig786:26314..34276- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig786.19116.1 ID=mRNA_F-serratus_M_contig786.19116.1|Name=mRNA_F-serratus_M_contig786.19116.1|organism=Fucus serratus male|type=mRNA|length=7963bp|location=Sequence derived from alignment at F-serratus_M_contig786:26314..34276- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig786:26314..34276- >mRNA_F-serratus_M_contig786.19116.1 ID=mRNA_F-serratus_M_contig786.19116.1|Name=mRNA_F-serratus_M_contig786.19116.1|organism=Fucus serratus male|type=CDS|length=3300bp|location=Sequence derived from alignment at F-serratus_M_contig786:26314..34276- (Fucus serratus male)back to top |