mRNA_F-serratus_M_contig7856.19115.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7856.19115.1
Unique NamemRNA_F-serratus_M_contig7856.19115.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D7G6M6_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M6_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 6.290e-45
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGDP S TFGR ENTFTSGFEGQWT+EP VWDNAYF+DLLEYDW + +SPAD  QWFPVLK+  TETEDEIPDI MLT+DIALL
Sbjct:  284 PEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALL 375
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D7G523_ECTSI (PEROXIDASE_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G523_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.280e-43
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGDP S TFGR ENTFTSGFEGQWT+EP VWDNAYF+DLLEYDW + +SPAD  QWFPVLK+  TETEDEIPDI MLT+DIALL
Sbjct:  284 PEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALL 375
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.450e-43
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGDP S TFGR ENTFTSGFEGQWT+EP VWDNAYF+DLLEYDW + +SPAD  QWFPVLK+  TET+DEIPDI MLT+DIALL
Sbjct:  284 PEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETKDEIPDIIMLTSDIALL 375
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D7FTZ8_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ8_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 5.890e-43
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGD +S+TFGR ENTFTSGFEGQWT+EP VWDN YF+DLLEYDW + +SPAD  QWFPVLK+  TETEDEIPDI MLT+DIALL
Sbjct:  240 PEAPWPGTCGDANSTTFGRAENTFTSGFEGQWTVEPLVWDNEYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDIALL 331
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: A0A6H5JAJ7_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ7_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.430e-42
Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGD  S+TFGR ENTFTSGFEGQWT+EP VWDN YF+DLLEYDW + +SPAD  QWFPVLK+  TETEDEIPDI MLT+D+ALL
Sbjct:   47 PEAPWPGTCGDVDSATFGRAENTFTSGFEGQWTVEPLVWDNQYFKDLLEYDWVMTESPADLVQWFPVLKEGATETEDEIPDIIMLTSDVALL 138
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.230e-39
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PEDPW GTCGDP S TFG+G+NTFTSGFEG WT EPTVWDN YF DLLEYDW  ++SPA N QW PVLK+D TET+  +PDI MLT+D+ALL
Sbjct:  282 PEDPWPGTCGDPDSDTFGKGDNTFTSGFEGAWTEEPTVWDNHYFIDLLEYDWIQDESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALL 371
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.740e-38
Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGDP S+TFGR ENTFTSGFEG WT EPTVWDN+YF DLLEYDW   +SPA N QW PVLK+D TET+  +PDI MLT+D+ALL
Sbjct:  343 PEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEEPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALL 432
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: A0A6H5JP97_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP97_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.390e-37
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            PE PW GTCGDP S+TFGR ENTFTSGFEG WT  PTVWDN+YF DLLEYDW   +SPA N QW PVLK+  TET+  +PDI MLT+D+ALL
Sbjct:   17 PEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEAPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEGATETD--VPDIIMLTSDVALL 106
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: A0A8J4G544_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G544_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 2.600e-27
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL 276
            P +PW GTCG+   +  G+G NTFTSGFEG WT  P  WDN YFQ+LL+YDWE+   P  + QW PV +K G + EDE+PDI MLTTD+ALL
Sbjct:  281 PWNPWPGTCGN--GTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVYIGPGGHHQWEPV-RKPGADPEDELPDIIMLTTDVALL 369
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BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Match: D8UCP0_VOLCA (Catalase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCP0_VOLCA)

HSP 1 Score: 109 bits (273), Expect = 5.740e-26
Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 1 
Query:    1 PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEYDWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIAL 273
            P DPW GTCG+   +  G+GENTFTSGF+G WT +PT WDN Y+Q+LL+YDWE+   P  + QW PV KKD ++ E E+PDI MLT D+AL
Sbjct:  283 PWDPWPGTCGN--GTMKGKGENTFTSGFDGPWTTQPTKWDNEYYQNLLKYDWEVYMGPGGHHQWRPV-KKDPSDPE-ELPDIIMLTADVAL 369
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7856.19115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M6_ECTSI6.290e-4579.35Catalase decomposes hydrogen peroxide to molecular... [more]
D7G523_ECTSI1.280e-4379.35PEROXIDASE_4 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JXZ4_9PHAE2.450e-4378.26KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FTZ8_ECTSI5.890e-4377.17Catalase decomposes hydrogen peroxide to molecular... [more]
A0A6H5JAJ7_9PHAE1.430e-4276.09KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7J0_ECTSI1.230e-3972.83Catalase is an enzyme, present in all aerobic cell... [more]
D8LN39_ECTSI2.740e-3872.83Catalase is an enzyme, present in all aerobic cell... [more]
A0A6H5JP97_9PHAE2.390e-3770.65KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A8J4G544_9CHLO2.600e-2758.70PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
D8UCP0_VOLCA5.740e-2658.24Catalase n=1 Tax=Volvox carteri f. nagariensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7856contigF-serratus_M_contig7856:12519..12932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue1.6e-37
Seed eggNOG ortholog2880.D7G523
Preferred namekatG
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.catalase activity
EggNOG OGs2QTDY@2759,COG0685@1
EC1.11.1.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size278
Cds size276
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932336.3535035-CDS-F-serratus_M_contig7856:12520..126081622932336.3535035-CDS-F-serratus_M_contig7856:12520..12608Fucus serratus maleCDSF-serratus_M_contig7856 12521..12608 -
1690964259.5633063-CDS-F-serratus_M_contig7856:12520..126081690964259.5633063-CDS-F-serratus_M_contig7856:12520..12608Fucus serratus maleCDSF-serratus_M_contig7856 12521..12608 -
1622932336.3726883-CDS-F-serratus_M_contig7856:12744..129321622932336.3726883-CDS-F-serratus_M_contig7856:12744..12932Fucus serratus maleCDSF-serratus_M_contig7856 12745..12932 -
1690964259.577485-CDS-F-serratus_M_contig7856:12744..129321690964259.577485-CDS-F-serratus_M_contig7856:12744..12932Fucus serratus maleCDSF-serratus_M_contig7856 12745..12932 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7856.19115.1prot_F-serratus_M_contig7856.19115.1Fucus serratus malepolypeptideF-serratus_M_contig7856 12521..12932 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7856.19115.1

>prot_F-serratus_M_contig7856.19115.1 ID=prot_F-serratus_M_contig7856.19115.1|Name=mRNA_F-serratus_M_contig7856.19115.1|organism=Fucus serratus male|type=polypeptide|length=92bp
PEDPWAGTCGDPSSSTFGRGENTFTSGFEGQWTLEPTVWDNAYFQDLLEY
DWEIEDSPADNPQWFPVLKKDGTETEDEIPDIRMLTTDIALL
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mRNA from alignment at F-serratus_M_contig7856:12519..12932-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7856.19115.1 ID=mRNA_F-serratus_M_contig7856.19115.1|Name=mRNA_F-serratus_M_contig7856.19115.1|organism=Fucus serratus male|type=mRNA|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig7856:12519..12932- (Fucus serratus male)
CCAGAAGATCCATGGGCAGGAACATGCGGCGACCCTAGCTCCAGCACCTT
CGGCCGTGGCGAAAACACCTTTACCAGCGGTTTCGAAGGCCAGTGGACGT
TGGAGCCGACTGTATGGGATAACGCATACTTCCAAGACCTGCTCGAATAC
GACTGGGAAATCGAAGACTCTCCCGCCGACAATCCTCAGTGAGCCACGAA
GTTTGCAACCGTTGCGGCAATGAACACACCACAGAATAAGCTCGCGTGCC
TCTTCGTACGGGTTGAGATTTGTGGAGTTTTTGTAACACGGAGTTGTCGA
CGCAATAATTCGGCAATTCGGCAGGTGGTTCCCGGTCCTCAAGAAAGACG
GCACGGAGACGGAAGACGAGATCCCCGACATCCGCATGCTCACGACAGAC
ATCGCCCTACTCAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig7856:12519..12932-

>mRNA_F-serratus_M_contig7856.19115.1 ID=mRNA_F-serratus_M_contig7856.19115.1|Name=mRNA_F-serratus_M_contig7856.19115.1|organism=Fucus serratus male|type=CDS|length=552bp|location=Sequence derived from alignment at F-serratus_M_contig7856:12519..12932- (Fucus serratus male)
CCAGAAGATCCATGGGCAGGAACATGCGGCGACCCTAGCTCCAGCACCTT
CGGCCGTGGCGAAAACACCTTTACCAGCGGTTTCGAAGGCCAGTGGACGT
TGGAGCCGACTGTATGGGATAACGCATACTTCCAAGACCTGCTCGAATAC
GACTGGGAAATCGAAGACTCTCCCGCCGACAATCCTCACCAGAAGATCCA
TGGGCAGGAACATGCGGCGACCCTAGCTCCAGCACCTTCGGCCGTGGCGA
AAACACCTTTACCAGCGGTTTCGAAGGCCAGTGGACGTTGGAGCCGACTG
TATGGGATAACGCATACTTCCAAGACCTGCTCGAATACGACTGGGAAATC
GAAGACTCTCCCGCCGACAATCCTCAGTGGTTCCCGGTCCTCAAGAAAGA
CGGCACGGAGACGGAAGACGAGATCCCCGACATCCGCATGCTCACGACAG
ACATCGCCCTACTCGTGGTTCCCGGTCCTCAAGAAAGACGGCACGGAGAC
GGAAGACGAGATCCCCGACATCCGCATGCTCACGACAGACATCGCCCTAC
TC
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