mRNA_F-serratus_M_contig785.19110.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig785.19110.1
Unique NamemRNA_F-serratus_M_contig785.19110.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 2.890e-118
Identity = 192/262 (73.28%), Postives = 208/262 (79.39%), Query Frame = 1 
Query:    1 MRAVSSLVSFSALATSSAFVVPGVTISHAFRGRTGWAGALRYVSRAHRSSTSRV-LALRRPAPGAGGXXXXXXXXXXXXXXEHGVEAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 783
            MRAVSSLVS SALATSSAFV PG     A  G+T  A ALR +SRA  +S+ R   ALRRP                    E    AAP GELTELARLEIR+GKI+EI+RHPDADSLYVEKVD+G GEEEGPRTIVSGLVNFC+ESDLLGRDVVVLCNLKPV+MKGV SAGMLLCSSNEDH+KVEPLCPP GVPLGELVTF+GH  SPV+AGNRAGKAWK+ASKTL VDD++ AKFTGE LPA FMTSKGPITSPLPG IS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAMALRCLSRARLTSSVRPQAALRRPTA----VRTMMMMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.760e-80
Identity = 127/176 (72.16%), Postives = 146/176 (82.95%), Query Frame = 1 
Query:  256 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 783
            AAP G+LTELARLE+RVG+I+EI RHPDAD LYVEK+DIG  E  GPRTIVSGLV +C E+DLL RDVV+L NLKPV+M+GV SAGM+LCSSN DHT+V PL PP G PLGELVTFEGH ++PVEAGNRA KAWKK +KT+ V +  VA+FT E LPA F TSKG +TSPLPG IS
Sbjct:   71 AAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIG--EPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.500e-64
Identity = 110/178 (61.80%), Postives = 137/178 (76.97%), Query Frame = 1 
Query:  250 VEAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 783
            V  AP+GELTEL+RLEIR GKILEISRHP+AD LYVEK+D+G  E +GPRTIVSGLV +  E +LLGR+VVVL NLKP ++KG+ S GMLLC+SNEDHT V+PL PP GV LGEL+TFEGH ++P   GNRAGKA+ + ++ L   +  +A + G     PFMTSKGP+T+ + G IS
Sbjct:  189 VVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLG--EADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKG----IPFMTSKGPVTTGMAGSIS 360
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.310e-60
Identity = 114/177 (64.41%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:  256 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP-LPGPIS 783
            A P G+  E   LEIRVGKILEI +HP+ADSLYVEKVD+G  E  GPRTIVSGLV FC    LL RDVVVLCNLKP + KG+ S GMLLCSSN+   KVEPL PPAGVP GELV+FEGH   P E GNRA KA+ K S    V D+ +A + G     PFMTSKGPITS  L GPIS
Sbjct:   67 AKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLG--ESSGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKG----IPFMTSKGPITSTILKGPIS 235
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.540e-58
Identity = 99/171 (57.89%), Postives = 125/171 (73.10%), Query Frame = 1 
Query:  271 ELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 783
            ELTEL+RLEIRVGKI+E+ RHP+AD LYVEK+D+G  E  GPRTIVSGLV FC    LL  +V+VLCNLKP ++KG+ S GM+LC++++D TKV+PL PP   P+G+L+TFEGH S PVE GNRA KA+ K +    V++  VA + G     PF T  GP+TS L G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLG--EPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNG----IPFSTPNGPVTSTLIGKIS 215
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.250e-56
Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 1 
Query:  253 EAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPL 768
            E AP GE+TEL+RLEIRVGKILE++ HP  + ++VEK+D+G   E+ PRTI SGL ++ +E DLL +D +VLCNLKP  + GV S GM+LC+S+ +HT V+ + PPAGV  GELVTF+GH ++PV+AGNRA KA+KK +   + DD+  A FTGE   + F TS GP TSP+
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPASS-FQTSSGPCTSPI 233
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 188 bits (477), Expect = 7.140e-56
Identity = 98/172 (56.98%), Postives = 123/172 (71.51%), Query Frame = 1 
Query:  274 LTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP--LPGPIS 783
            LTEL+RLEIRVGK++E  RHPDAD+LYVEKVD+G   E+ PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDHTKV+PL  P    +G L+TFEGH ++P++AGNRA KA+ K +     D   +A+F       PFMT  G   SP  L G +S
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNA----TPFMTEAGACYSPAKLQGSVS 232
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 188 bits (477), Expect = 1.520e-55
Identity = 100/172 (58.14%), Postives = 125/172 (72.67%), Query Frame = 1 
Query:  274 LTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP--LPGPIS 783
            LTEL+RLEIRVGKI++  +HP+ADSLYVE+VD+G  +E G R IVSGLV+F    +++ R V+VLCNLKP +M+G+ S GMLLC+SNEDH++V+PL  P GVP+G LVTFEGH S P  AGNRA KA+ K +K+L  D T VA F       PF T  GP  SP  L GP+S
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMFEQ----VPFATPSGPCFSPKKLVGPVS 257
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 2.050e-55
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 1 
Query:  253 EAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITS 762
            ++AP   LTEL+RLEIRVGKI+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR VVVLCNLKP +M+GV S GMLLC+SNEDHT V+PLC P   P+GELVTFEGH S+P++  NRA KA+ + +  L  ++  VA F       PF TS GP  S
Sbjct:  108 DSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMFED----VPFSTSAGPCFS 270
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BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.390e-54
Identity = 101/176 (57.39%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:  256 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 783
            AAP GEL E +RLEIRVGKI+++S HPDAD LYVEK+D G   E+ PRTIVSGLV + +  DLL R VVVL NLKP +M+G+ S GMLLC+SNEDH++V PL PP     GEL+T EG  S P+E  NRA KA+ K +K L V+D   A F G+    PF+T  GP TS + G IS
Sbjct:   77 AAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGK----PFLTPNGPCTSTMKGAIS 245
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI2.890e-11873.28Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA6.760e-8072.16Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA2.500e-6461.80Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S3M138_9STRA3.310e-6064.41Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S0XDL6_9STRA6.540e-5857.89Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2R5F0_9STRA6.250e-5655.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0ZE83_9RHOD7.140e-5656.98Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A5J4Z2W6_PORPP1.520e-5558.14Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A2V3IUX7_9FLOR2.050e-5558.24Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S2V4I0_9STRA3.390e-5457.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig785contigF-serratus_M_contig785:359213..365057 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.6
Seed ortholog evalue7.9e-95
Seed eggNOG ortholog2880.D7FMW6
Preferred nameYARS
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorychloroplast
GOsGO:0000049,GO:0001664,GO:0002682,GO:0002685,GO:0002688,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005102,GO:0005126,GO:0005153,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006915,GO:0006935,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009605,GO:0009966,GO:0009987,GO:0010467,GO:0010469,GO:0010646,GO:0010758,GO:0012501,GO:0016070,GO:0016604,GO:0016874,GO:0016875,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0023051,GO:0030334,GO:0030545,GO:0031974,GO:0031981,GO:0032101,GO:0032879,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034660,GO:0040011,GO:0040012,GO:0042056,GO:0042221,GO:0042330,GO:0042379,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045236,GO:0046483,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0050920,GO:0051270,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905521,GO:2000145
EggNOG free text desc.tRNA binding
EggNOG OGsCOG0143@1,KOG2241@2759
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons6
Model size786
Cds size786
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig785.19110.1prot_F-serratus_M_contig785.19110.1Fucus serratus malepolypeptideF-serratus_M_contig785 359213..365057 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932335.9601355-CDS-F-serratus_M_contig785:359212..3593021622932335.9601355-CDS-F-serratus_M_contig785:359212..359302Fucus serratus maleCDSF-serratus_M_contig785 359213..359302 -
1690964259.386386-CDS-F-serratus_M_contig785:359212..3593021690964259.386386-CDS-F-serratus_M_contig785:359212..359302Fucus serratus maleCDSF-serratus_M_contig785 359213..359302 -
1622932335.9731987-CDS-F-serratus_M_contig785:359668..3598691622932335.9731987-CDS-F-serratus_M_contig785:359668..359869Fucus serratus maleCDSF-serratus_M_contig785 359669..359869 -
1690964259.4026678-CDS-F-serratus_M_contig785:359668..3598691690964259.4026678-CDS-F-serratus_M_contig785:359668..359869Fucus serratus maleCDSF-serratus_M_contig785 359669..359869 -
1622932335.9889436-CDS-F-serratus_M_contig785:360244..3604181622932335.9889436-CDS-F-serratus_M_contig785:360244..360418Fucus serratus maleCDSF-serratus_M_contig785 360245..360418 -
1690964259.4136105-CDS-F-serratus_M_contig785:360244..3604181690964259.4136105-CDS-F-serratus_M_contig785:360244..360418Fucus serratus maleCDSF-serratus_M_contig785 360245..360418 -
1622932336.004883-CDS-F-serratus_M_contig785:360763..3608841622932336.004883-CDS-F-serratus_M_contig785:360763..360884Fucus serratus maleCDSF-serratus_M_contig785 360764..360884 -
1690964259.4253082-CDS-F-serratus_M_contig785:360763..3608841690964259.4253082-CDS-F-serratus_M_contig785:360763..360884Fucus serratus maleCDSF-serratus_M_contig785 360764..360884 -
1622932336.0179229-CDS-F-serratus_M_contig785:361286..3614071622932336.0179229-CDS-F-serratus_M_contig785:361286..361407Fucus serratus maleCDSF-serratus_M_contig785 361287..361407 -
1690964259.4356456-CDS-F-serratus_M_contig785:361286..3614071690964259.4356456-CDS-F-serratus_M_contig785:361286..361407Fucus serratus maleCDSF-serratus_M_contig785 361287..361407 -
1622932336.0348275-CDS-F-serratus_M_contig785:364978..3650571622932336.0348275-CDS-F-serratus_M_contig785:364978..365057Fucus serratus maleCDSF-serratus_M_contig785 364979..365057 -
1690964259.4501433-CDS-F-serratus_M_contig785:364978..3650571690964259.4501433-CDS-F-serratus_M_contig785:364978..365057Fucus serratus maleCDSF-serratus_M_contig785 364979..365057 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig785.19110.1

>prot_F-serratus_M_contig785.19110.1 ID=prot_F-serratus_M_contig785.19110.1|Name=mRNA_F-serratus_M_contig785.19110.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MRAVSSLVSFSALATSSAFVVPGVTISHAFRGRTGWAGALRYVSRAHRSS
TSRVLALRRPAPGAGGMMMSETTTTTTTDDEHGVEAAPRGELTELARLEI
RVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLG
RDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVT
FEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKG
PITSPLPGPIS*
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mRNA from alignment at F-serratus_M_contig785:359213..365057-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig785.19110.1 ID=mRNA_F-serratus_M_contig785.19110.1|Name=mRNA_F-serratus_M_contig785.19110.1|organism=Fucus serratus male|type=mRNA|length=5845bp|location=Sequence derived from alignment at F-serratus_M_contig785:359213..365057- (Fucus serratus male)
ATGCGAGCTGTTTCGTCTCTCGTGTCATTTTCAGCTCTAGCTACTTCTTC
GGCCTTCGTTGTCCCAGGTGTGACCATAAGTCGGCTACTGAAACCCTTCG
CATGTAGTTGGTGTACTCGCCGAAACACGTTCCTACACCCCCGCATCCCG
ACTTCATACACCAATGGGAAAGAGAGGCGCATATTAATTGGTCCATGGGG
ATGCAGCAAGACAGCACCCGTTTGGTACTACTATGAGGTTTACTGGCCCT
GTACCGGCGAACTCTCGGCAGTGAACGCCATCGGTACGTAATTGCATGAC
CCGATAAACTCCGGGACTGACCCGATGGCGTATGGCGGTTTAAATATATA
AATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTTAGTAATTACCAGA
TTTAGCCTGAGTATTGAGATAAGCAGGCTGACGCGGGACGGGACTGCCGA
ACCCGTCTCGCGAGACCAATTTCTCAGGCCCGAACGGGGACACGCAAATA
TTAATTTTCCCCGTTCAGCTGACCACGAGCAGGATTGGCAGCCTTACCCG
GTTGATCCTTACCCTTGCCATATGTGATGACCATACATGCATACGGTACA
TACGTATGAAACCGTCTCTGCGAAGGCAGCGCGCAGCGCCTTTGCACGGA
CAACATCTCGCATTCTTCTAGTGAGGTAATAGCTCGGGCTTCAACTCTCT
CTCAGCCGCATATGTGATCAGCAGTCTTTGACTGACGCCTGCGCGTGCGC
GGCTGTGTCATGATAGTCGTGTACTGTAGGTGTCTTGCTCTACACGAGTA
TGGAATGTTTTTGTGGGCCCCAGTGATACAGGTAGCGAGAGGACCACCCC
CGACATTGCATTATACTACCCCCTCCAATACTTTATGTATCACCAATGTC
CACTACATGCCGCGGTTATTATCAAAAGTGGTCTGGAAAAAGAGAGGCGT
GCAAATATTGGTCCATGGCATGGGCGATACCTTCAAAGGCAGCACCCGTT
ACTCGAACTATGATACATTAACGGGGCCCCTTTTTCCTATAGGAATAGAA
CGCCTCATGTATATGATTTTTTCCTGTTACGGTTCGTCAAATGGTTATTA
AGGGCATAAAAATATCGACAGCTCCGCCCCTGATTGGCCAGGAACGGTCC
AGAAACATTCCGGCACCTCTACAACATAAAAAAAATAGGTTGATCTAATA
GGTTGATCGGTACAAGAAAGGCGTGACTACGGGCGTTTTTGCCACAAAGT
ACAATTTTGGTATCAGCAATATGAGGTGCGAGCCCGCTGCTGTCCCTATC
ACCACATCTTCCAAACGTAAGAGTGTATAGTCATGTATCTTTGTCCAGTA
GGAAGGTTTGGGCTTCGAAGGTCATGTACCGAGGTTCGGCGACCGACTTT
TGGTGATTTTGTGTAAACCCGGGGATCCCACCACAAGTGCCACAGAAAGG
TGACCACACACATTTAGACAACTTTCTTCGGCTTAGTAGCACGTAGAAGA
TTGTCCTCTTCGGAGGTTGCTCCGGCAGCGGTTGGGGAGGTCTGCCGAGC
AAAACCGCGGTCTCGGAGGCGATATCAGGCTCAAGAGCGGTCCATACCTG
TTGCCGTTTCTACTGCTGCATGGCGGGCGACCTCGCTCGGGCCGACCAAG
CACAACTCCCGAAAATATATTGCCACAAGAGAGATATCAACTAGTCTCGA
ACCTCTATCTGCAGTGTTTACCATGTGCTACGCAAATGCATACGCGGAAA
TAGGGCAGCCTACCTGCATCGAGCCCCGGGGGGGGGCATAGGTGACAGGA
GGTATTTGAAGGGTTATGACTGTGGTCCAAAAAGTATAGTGAGAAACAGC
GAGGAACAGTCCTGGGCTCCGAGACGATTTCCTTTGTATCGTGCCACATG
ACCTACAAGCCCCCCCAGGCCGATAGTCCTGAGTCATAGGATCACGTATG
TACCTTGCAGAGCTGCCATGGCGCCGTGGTTGCTCCGTTACCCGAGGTGC
CCCACAAGGACTCTTCAGTTTTCTCTCTGTTTTCTTTAATAAAGCTCCAT
TTGCCCTCCCTCCCATTGGCTAGTAGCTACGGTCGTGTGGCTGTTTCATC
TGTATTTTGTGCCCAAAATATTATATATTTTTTCGGCCCAAACGCGTGGG
GCCCCGTTAAGAACTACTGGCCCGGTGCCGATGGACTCTTGGCAGTGAAC
ACCATCGGCATGCAATCGCGTGACCCGACGAACTCGGGAGTGACCCGATG
GCGGTTGAGGGTATAATTGAATGAGCGCCGTTGCGTAAAACGGGAGGAAT
CCCGCGAGGAAGCACCAGATTCAGCCTGAGTGTTGAGCGGGACGGGACGG
CCTATTCCGTCTCGTAAGACCAAATTCTCAGGCGCGAACTTGGCAAGGGC
AAAAATATGTTTCCCTGTTTAGCTGACCACGAGCAGCATGGGCAACCATT
TCCGGCTGACCCTAATGCTACAGTACTACCAGTGGGGAACCCAGTTAAAT
CCAATGACGAATTTTGTCCTTGCAGGGTATGTTCCCACAAAAACGTTTTG
GCAGTTTCCCCCACCTGTCTGGGTGGATGCTGTTATTATATTGAATTTGA
TGTGCTCAGGTTTTTCTTTAAACATTCAGTAGAAGTCAAGGAAAATGTAA
TGGGATCAGTAAAATTCTTGGGACAGAGGAGAAAAATTCTGAAGAACGAG
CAGGCACTCGTCCGGAAAAGACACCGGGGATGCTCAGAAGATCTAGATGT
AGATGCGTTCAGCTTGTTTTTTTTAACAGAACAGTGCACTCGTACACATA
CCAGGTACAGTACTTGAACTTCTTTACTTGGAGACTATATTTACAGCTGA
GCCGTAGTACTAGAGATCCCAAGCTTCCATCTTTCATTTTCCTATCTCCG
AACATGCATTCCACTCGCCTCTCGCTTGCGGTCTCACGATTTTGTGAAGG
CCTACGGCTCACAACCTTTGTGACACGCGCCAAAATGGGTTCCAAACGGA
TACATCAACCTTCTCGGGTAGCAGGTAGAACCGCCCTATAACAGCTACAG
CACAGGCCTACCTTTATCACGGTAAAGCTGGACACGAAAAACTCGCTACC
GTACCTTAAAAATAAATAAATATATACTGGTATATATATATATATACCAG
GTAGAGGGCATCTAAGTCTTAGGAGGTCTACATGTAGATGCGTTCAGTTT
GGTTTTAAACAGAACACACAGTAGTGCACTCGTACACATATCAGGTACAA
CAGTACTTGAACAACTTTATCTGGAGACCATATTTACACCTGAGGCAGCC
GTAGTACTAAAGATTCCAAGCTCGTTCATCTTTCATTTTCCTATCTCCAA
ATATGCATTCCACTCGCCTCTCGCTTGCGGTCTCACGATTTTGTGAAGGT
CTACGGCTCGCAACTTCGTGACACGCGCCAAAATGGGTTCCAAAGCGGAT
ACACACCAACCTTTTCAGGTGGAACGGCCCGATAACAGCTAACAGCTACA
GCATAGGCCTACCTTTATCGTGGTAAAGTTGAACATGAAAAATTCCAGTT
CGCTACCGTACCTTAATAAATACGGTATATATCGAGGACATCTGAGTCTT
CTCTTTCCTCGCCCTCTACTTTTGTGGATCTCCTCCCTCACACCTCGAAG
GCCATGCTTTTCGTGGAAGGACCGGTTGGGCCGGAGCCCTGCGGTATGTT
TCCCGAGCTCATCGATCGTCTACATCACGGGTGTTGGCGCTCAGGCGACC
TGCACCAGGGGCGGGAGGCATGTGTCGTACGGTGAGGTGCTCGCTGATCC
AAGGTCGGCGGGAGAGGGTCTAAGTATCATACACCGCAGCATACCAACCA
CCACCGTACGTGCAGGCTTTGAAAGCACACGTTCGGATGGATGCGCACCT
GCTCGGTTTTCCCCAATGTCGTAATTGTTTTCGTCTGAAGGCAGCGAGAT
CGAACGCCGTGGACTTGGCGGAGCTCTTGTGCGTGTCTGTTTTCCACGAA
AGTTTAGATCGCCGGACTGCGCAATATTATTTCGGTCCTAGCTTCAGAGC
GTGTGTCATATTCAGCAGCTGTAACGCACCGGACTGCGCCCAATGTTATT
GTGGCCCTGACTTATGTGCGAGTGGCATGTACAGTTTTTAACTTCTCACA
GCGATTCTACCGTAACAGGCGAGGATGATGTCGGAAACGACGACGACCAC
GACGACGGATGATGAGCACGGGGTTGAGGCAGCTCCGAGAGGAGAATTGA
CAGAGCTAGCTCGCCTCGAAATTCGCGTGGGAAAGATCTTAGAGGTAATA
AACAGCCCCTCCTCATCGAGTGCCAACCGGTGGCCTTTGTAGATACATTC
AGGGGCTGGTACTCCTTAAGAACGGCCCCTCCATAAGTTATGCCATACCA
TGATCCTGCTATCAGCGAGTGGAGCGAAGTGTTTTTTTTTTTAGGAAAAA
CTTCGCCGCAAGCGTGGGGGAAAATGATGATTTCTCGTTTGTCCCTTTTC
GCTGCTCGATTACTGATGACGTCGAACACCGTAAAGCACCTGTGTCGACG
CGTGCGGTGGAGCTTCCTGCCGCCAACACTGAGGAGACGCTTTTTCCTTC
TCGACTCTGCGCTCACGCACCATCTTAATTGCTGCGCAGATTTCTCGGCA
TCCTGACGCCGACAGTCTATACGTAGAAAAAGTAGACATCGGGGCTGGTG
AGGAAGAAGGGCCGCGAACCATCGTTTCGGGCCTGGTGAACTTTTGCCAA
GAATCTGACCTGTTGGGGAGGGACGTGGTTGTTCTCTGCAACCTTAAGCC
CGTCAGCATGAAGGTGTGCTCCGACCAATCAACTACATAAGTGCGCCTCA
AAAAGTTGAAGGCGTGTCCTCGCTCAAGTTCTTCGCTGTTTTACATTCTG
TAGCTTGACATTTAACACTGAAGCCGGTCTGGGCTTGATTGACTCCCTTT
GTCATCCTCGAGGGATCACGTGCTCCAAGGAATTTTTATTCCGTCTCCAA
AACTGTCAAATACGTTGGGCAAGAACGCCTCCCTCTCCCGGAGGCGTGAC
CAGATCATGTTCCAGGATCGAAAGAAATTTCTGAAGCAACCAAGAAACAT
AATGCGTCTCCAGTGTACATGAATGAGGCAGTGCGCACCCGCCCGCATAC
CTTTTTGATTCCGCTTACGTATCCTCGACGCTCGTTAGGGAGTGCTGTCG
GCGGGTATGTTGCTGTGCTCCAGTAACGAGGACCACACGAAAGTGGAGCC
CCTCTGTCCCCCAGCGGGCGTGCCTCTTGGAGAACTGGTGACCTTCGAGG
GGCATTCATCGTCGCCGGTCGAGGCTGGCAACCGCGCGGGAAAGGCGTGG
AAAAAGGCGTCCAAGACGCTGGAGGTTGACGACACCAAGGTATGGGCGCT
CACTTGGCCGGACATAGAGAGTTCATTTGAACTACGCAATACACACTTTG
AGATGCCGTGGAGCCTTGAAATTGAGCCATTGGGTTGAGAGGTGCTAGCA
CACGGGGAGAATCGCTCCCTGGCGATCGCGATTGGTGTCGTCTCTCGGTA
CAGCAGAGATACGGTTACATCACATGCGGAGGACCGCTCTCTGGAAATTG
GGGTTCTTTCCCCTCGTTTCAGCGAAAACATGTGTTTTCATTCAAGCGAA
GATAGGATAATCCTAACAAAAGGTCTGATGGTCGCTTGGTTGTGGGCCGT
TCATGAGTGTTTTAACTCGCACGTCGATCGCGTGCCATCTACGCTCTTTT
GCCAGGTGGCGAAGTTCACGGGGGAAACGCTTCCCGCTCCTTTTATGACG
TCCAAGGGTCCCATCACCTCCCCGCTGCCGGGACCCATATCATGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig785:359213..365057-

>mRNA_F-serratus_M_contig785.19110.1 ID=mRNA_F-serratus_M_contig785.19110.1|Name=mRNA_F-serratus_M_contig785.19110.1|organism=Fucus serratus male|type=CDS|length=1572bp|location=Sequence derived from alignment at F-serratus_M_contig785:359213..365057- (Fucus serratus male)
ATGCGAGCTGTTTCGTCTCTCGTGTCATTTTCAGCTCTAGCTACTTCTTC
GGCCTTCGTTGTCCCAGGTGTGACCATAAATGCGAGCTGTTTCGTCTCTC
GTGTCATTTTCAGCTCTAGCTACTTCTTCGGCCTTCGTTGTCCCAGGTGT
GACCATAAGCCATGCTTTTCGTGGAAGGACCGGTTGGGCCGGAGCCCTGC
GGTATGTTTCCCGAGCTCATCGATCGTCTACATCACGGGTGTTGGCGCTC
AGGCGACCTGCACCAGGGGCGGGAGGCATGCCATGCTTTTCGTGGAAGGA
CCGGTTGGGCCGGAGCCCTGCGGTATGTTTCCCGAGCTCATCGATCGTCT
ACATCACGGGTGTTGGCGCTCAGGCGACCTGCACCAGGGGCGGGAGGCAT
GATGATGTCGGAAACGACGACGACCACGACGACGGATGATGAGCACGGGG
TTGAGGCAGCTCCGAGAGGAGAATTGACAGAGCTAGCTCGCCTCGAAATT
CGCGTGGGAAAGATCTTAGAGGATGATGTCGGAAACGACGACGACCACGA
CGACGGATGATGAGCACGGGGTTGAGGCAGCTCCGAGAGGAGAATTGACA
GAGCTAGCTCGCCTCGAAATTCGCGTGGGAAAGATCTTAGAGATTTCTCG
GCATCCTGACGCCGACAGTCTATACGTAGAAAAAGTAGACATCGGGGCTG
GTGAGGAAGAAGGGCCGCGAACCATCGTTTCGGGCCTGGTGAACTTTTGC
CAAGAATCTGACCTGTTGGGGAGGGACGTGGTTGTTCTCTGCAACCTTAA
GCCCGTCAGCATGAAGATTTCTCGGCATCCTGACGCCGACAGTCTATACG
TAGAAAAAGTAGACATCGGGGCTGGTGAGGAAGAAGGGCCGCGAACCATC
GTTTCGGGCCTGGTGAACTTTTGCCAAGAATCTGACCTGTTGGGGAGGGA
CGTGGTTGTTCTCTGCAACCTTAAGCCCGTCAGCATGAAGGGAGTGCTGT
CGGCGGGTATGTTGCTGTGCTCCAGTAACGAGGACCACACGAAAGTGGAG
CCCCTCTGTCCCCCAGCGGGCGTGCCTCTTGGAGAACTGGTGACCTTCGA
GGGGCATTCATCGTCGCCGGTCGAGGCTGGCAACCGCGCGGGAAAGGCGT
GGAAAAAGGCGTCCAAGACGCTGGAGGTTGACGACACCAAGGGAGTGCTG
TCGGCGGGTATGTTGCTGTGCTCCAGTAACGAGGACCACACGAAAGTGGA
GCCCCTCTGTCCCCCAGCGGGCGTGCCTCTTGGAGAACTGGTGACCTTCG
AGGGGCATTCATCGTCGCCGGTCGAGGCTGGCAACCGCGCGGGAAAGGCG
TGGAAAAAGGCGTCCAAGACGCTGGAGGTTGACGACACCAAGGTGGCGAA
GTTCACGGGGGAAACGCTTCCCGCTCCTTTTATGACGTCCAAGGGTCCCA
TCACCTCCCCGCTGCCGGGACCCATATCATGAGTGGCGAAGTTCACGGGG
GAAACGCTTCCCGCTCCTTTTATGACGTCCAAGGGTCCCATCACCTCCCC
GCTGCCGGGACCCATATCATGA
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