mRNA_F-serratus_M_contig785.19097.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A6H5L2A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A9_9PHAE) HSP 1 Score: 573 bits (1478), Expect = 9.170e-197 Identity = 282/386 (73.06%), Postives = 316/386 (81.87%), Query Frame = 1
Query: 535 VALTLDRALEEGINRAMRGDAGVLRQVLAADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGGLELEWIASGTWPLPWLPRFIVKGKSIVDIGSDGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRNPEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPPPAKGREKGGGQRSRHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNSRGCFNKAGQLSMSILYHRPKYIGIGNEVFVELDDEEAVTGACVWGDEG 1692
+ LTLD+ALEEG+NRAMRGD GVLRQVLA V+WRGPLG GL V ELRGLG LLS P++S+FA ++ G LEWIASGTWPLPWLPRFIVKG S + G DGKVV ++DTWEGN + L LKHLVPGFWD+WHQLGSPPAE+ PY+V+K+ GY IREYAPRL QPSLID SNSRE+R ALILPGF H GE++TSGR P+EY+VTGP+EVAIQP I G F NGTWFNGT REAS SRR+NRITWTVP+PTAMGLD + LP P RE+G QRSRHVRQG RRIA NFNG+PQDPEA+EVR+KLL LAADGV P+KG DGRVRSGILMHNS CF KAG+L+MSILYHRPKYIGIGNEVFVELD EEAVT V G G
Sbjct: 158 LPLTLDKALEEGVNRAMRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLSAPRMSVFA-SKDGAKRLEWIASGTWPLPWLPRFIVKGASKLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRLATQPSLIDYSNSREIRKALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTRREASQSRRANRITWTVPIPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPSKGADGRVRSGILMHNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVG 542
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: D7FR29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR29_ECTSI) HSP 1 Score: 546 bits (1406), Expect = 1.570e-188 Identity = 267/370 (72.16%), Postives = 300/370 (81.08%), Query Frame = 1
Query: 583 MRGDAGVLRQVLAADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGGLELEWIASGTWPLPWLPRFIVKGKSIVDIGSDGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRNPEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPPPAKGREKGGGQRSRHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNSRGCFNKAGQLSMSILYHRPKYIGIGNEVFVELDDEEAVTGACVWGDEG 1692
MRGD GVLRQVLA V+WRGPLG GL V ELRGLG LL+ P++S+FA ++ G LEW+ASGTWPLPWLPRFIVKG S + G DGKVV ++DTWEGN + L LKHLVPGFWD+WHQLGSPPAE+ PY+V+K+ GY IREYAPR+ QPSLID SNSRE+R ALILPGF H GE++TSGR P+EY+VTGP+EVAIQP I G F NGTWFNGT REAS SRR+NRITWTVPVPTAMGLD + LP P RE+G QRSRHVRQG RRIA NFNG+PQDPEA+EVR+KLL LAADGV P KG DGRVRSGILM+NS CF KAG+L+MSILYHRPKYIGIGNEVFVELD EEAVT V G G
Sbjct: 1 MRGDPGVLRQVLAPGVEWRGPLGNNAGLAKVEEELRGLGSLLNAPRLSVFA-SKDGAKRLEWVASGTWPLPWLPRFIVKGASTLQTGPDGKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQPSLIDYSNSREIRKALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTTREASQSRRANRITWTVPVPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPAKGADGRVRSGILMYNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVG 369
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A835YSS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS2_9STRA) HSP 1 Score: 325 bits (832), Expect = 7.930e-102 Identity = 163/380 (42.89%), Postives = 242/380 (63.68%), Query Frame = 1
Query: 523 EEGAVALTLDRALEEGINRAMRGDAGVLRQVLAADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGGL--ELEWIASGTWPLPWLPRFIVKGKSIVDIGS-DGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRNPEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPPP-AKGREKGGGQRSRHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNSRGCFNKAGQLSMSILYHRPKYIGIGNEVFVELDD 1650
E L L AL G+NRA+RGD+ VLRQVL+ + W+GP+ + + +LR +G LSDP+ ++ + G LEW+AS TWPLPW PR +++G+++V + S G++++M DTWE + ++HL+PGFWD+W+Q SP AE+ P+KVL++ GYE+ ++APRLV +P+L+DR+NSR+ RMA +LP FS T + T GR PE+YF T PIE I P+IE SN NG++ S+ R+NRITW V VP + GL+ +P P +G G RQ R +A N+NG QD EA E+R+KLL L+ D G +GR ++G + + + FNK G++S+++ +RPK +G GN+V+VEL++
Sbjct: 18 EAAETPLELGPALTLGLNRAIRGDSSVLRQVLSDNCSWKGPVASYDSRNKIEEDLRNVGSFLSDPRFTVASTTPTGDATYSLEWLASATWPLPWTPRIVIQGRTLVRLDSAGGRIISMEDTWEEAPVQALIRHLLPGFWDIWNQFCSPIAERYPHKVLRRGRGYEVWQFAPRLVLRPTLVDRTNSRQARMAYVLPDFSFTSSVNTRGRVPEKYFTTSPIEAEITPLIETNTVSNE---NGSL--GSVQTRANRITWAVQVPASFGLEAGAMPDPRGEGYNPLNGDAIEFERQDRRVVAVANYNGSVQDKEAVELRAKLLEQLSMDKAKVALGPEGRPKAGFMSFDGKVGFNKQGRVSIAVYEYRPKILGKGNKVYVELEE 392
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A6V1P7S5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7S5_HETAK) HSP 1 Score: 195 bits (496), Expect = 4.060e-52 Identity = 121/372 (32.53%), Postives = 188/372 (50.54%), Query Frame = 1
Query: 562 EEGINRAMRGDAGVLRQVLAADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGG-------LELEWIASGTWPLPWLPRFIVKGKSIVDIGSDGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRNPEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTV-REASMSRRSNRITWTVPVPTAMGLDVSTLPPPAKGREKGG---GQRSRHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNSRGCFNKAGQLSMSILYHRPKYIGIGNEVFVEL 1644
E IN+A++ + LR+ + W P+ + L +G L DP++++ A RGG +E++W+ + TWPLPW P V G++++ + +G++ +DTWE + +AL P FWD +H PPAE Y+V + GYE+R+YAPRLV +DR N+RE R A LP + + G+ PE ++VT PIEV+ F G + +E ++ N I W V +P A GL++ LP P GRE R H G RR+A FNG QD S+ R++LL+ DG G GR + L ++++ F + G L ++ + P++ GNE+ +EL
Sbjct: 71 ENAINQALKTNLDPLRKFAVSGATWDNPVEAQKDRAGMEKLLLDVGNFLEDPRLTVHAARARGGDGGGGALVEVDWLKTATWPLPWRPPVQVFGRTVLRLDGEGRLAAAADTWEQSPYQVALGQCRPRFWDFYHFKAFPPAEFPAYRVAARGEGYEVRDYAPRLVVVGRTLDRVNTRETRAARTLPESMFSCTISMIGKIPERFYVTSPIEVS---------------FRGKMLKEGDAQKKVNAIQWKVGLPKAFGLELGGLPDP-DGRETAQEMQDDRVWHQVDGPRRVAVARFNGQNQDVGVSKARAELLAKAQEDGHELLLGNSGRPQFSFLQNDAKVGFKRTGGLGVA--GYEPRW-DTGNEIALEL 423
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A8J2SS52_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS52_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.370e-33 Identity = 106/378 (28.04%), Postives = 179/378 (47.35%), Query Frame = 1
Query: 571 INRAMRGDAGVLRQVLAADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGGLELEWIASGTWPLPWLPRFIVKGKSIVDIGSDGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQP-------SLIDRSNSRELRMALILPGFSHTGELRTSGRNPEEYFV--TGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPP-PAKGREKGGGQRS--------RHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMH-NSRGCFNKAGQLSMSILYHRPKYIGI-GNEVFVEL 1644
++ A+RGD+ LR+ LA+DV W+ LG+ G +A + G DP++ + + + E W+ASGT P+ W PR +V G + + DGKV + D W+ + + L+ + P FWD++ +P AE +VL + ++ RLV P SL D SNSR+ R+A LP F + R+ P + T P+ V+I+ + R R+TW +P+PTA+GLD ++LP P K GG + Q + +++G PQD A+ +R L + A G++ G +G +L ++ ++ G L+ ++ + P ++ + GNE+ VE+
Sbjct: 82 LDEALRGDSTHLREELASDVVWQHGLGEAKGAKAALKLVEEAGDFYDDPRLDVLSSSDN---EFRWLASGTQPVQWSPRVLVHGTTTIT-RQDGKVTRVIDRWDSSPTDIGLQQVAPKFWDVFDLWATPVAETPCEEVLNE---FKFSMGQARLVRSPERLCLVCSLDDVSNSRKQRVASALPDFVFLADTRS----PTDVIAATTTPLSVSIEAL----------------PRVDGEPRKRRVTWALPLPTALGLDFASLPELPRKAELNDGGLELGVAENPSLTYALQPAKLYVCASYSGDPQDAAAAPLRKALAEAAVAQGLSLVPGANGGAAPAVLRKWRAKLGYSDVGALAYAMESNAPSWVSVDGNELCVEV 432
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A7S2BLZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLZ7_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.380e-28 Identity = 119/420 (28.33%), Postives = 185/420 (44.05%), Query Frame = 1
Query: 475 PMTEETGMTGRHDKDEEEGAVALTLDRALEEGINRAMR----GDAGVLRQVLAAD---VQWRGPLGQFI-GLEAVNAELRGLGQLLSDPKISIFA-------CNRRGGLELEWIASGTWPLPWLPRFIVKGKSIVDIGSDG-----------KVVNMSDTW--EGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRN-PEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPP--PAKGREKGG--GQRSRHVRQGF-----RRIAAINFN-GLPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNS-RGCFNKAGQLSMSILYHRPKYI 1614
P+++ + M + A ++ + AL + + A R G + +L D V+WRG G+ G AV A L +GQ DP +I A + G +EW SGTWP PW PR + G+S V + S G +V + D W ++ L L L P +D + +P AE + KV ++ GY+IR LV + + E+ LP F+ TG ++ G+ E+ T P+ V+I+ + + F+G ++ + TWT+PVP+ GLD++ LPP P RE+G G + F RRIA + F G EAS+VR KLL++L DG L N+ + C+ + G M++ RP Y+
Sbjct: 55 PISDHSNMESETSDTPSKSAPPISFEAALGQRLQSAWRAGLEGSEQTVLDILDLDDGSVEWRGATGETSKGAAAVAARLAEMGQFYGDPCFTITAIAPEKGSASGSGLWRVEWQFSGTWPFPWRPRIRLSGRSSV-VTSRGATSSSSSVDLLRVRRIDDEWLAPSSLPDLVLSQLNPRLFDALNIFNTPHAEFVEGKVEERCQGYQIRWVPKHLVLKIRTEIDPGNEEMNQGFFLPNFAFTGPIKQRGKFIAEDLVATSPLSVSIEAV-------DSAVFDG--------KKIKQATWTIPVPSEHGLDMTNLPPVPPLDEREEGELIGPCAPTAYAAFELVPARRIAVVPFGMGDTVSQEASDVRRKLLNALERDGRRFRLSASSNKPLFTLHENTVKLCWTRGGAHGMAVYSPRPSYL 458
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A8J5XYQ7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYQ7_DIALT) HSP 1 Score: 117 bits (292), Expect = 1.700e-24 Identity = 97/362 (26.80%), Postives = 163/362 (45.03%), Query Frame = 1
Query: 619 AADVQWRGPLGQFIGLEAVNAELRGLGQLLSDPKISIFACNRRGG--LELEWIASGTWPLPWLPRFIVKGKSIVDIGS----DGKVVNMSDTWEGNVLGLALKHLVPGFWDLWHQLGSPPAEQMPYKVLKKTWGYEIREYAPRLVYQPSLIDR---SNSRELRMALILPGFSHTGELRTSGRNPEEYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSN---RITWTVPVPTAMGLDVSTLPPPAKGREKGGGQRSRHVRQGFRRIAAINFNG-LPQDPEASEVRSKLLSSLAADGVTPNKGEDGRVRSGILMHNSRGCFNKAGQLSMSILYHRPKYIGIG-----NEVFVELDD 1650
+ADV+ G L + G+ L DP + + + + G +EW+ASGTWPLPW PR + G S +++ + VV ++DT + + + + + L+P + D++ SPPAE PY+V++ YE+R P + + +L S++ +A +LPGF+ TG+ + + A++PI TV R++ WTVP+P+ +G D S LPP + G + ++ R +AA G L D +L + L ADGV G R +N + FN AGQL+++ +Y G NE+ V++++
Sbjct: 80 SADVRVSGLLWSASSRREWQRAVSDSGKFLVDPMLEVLSVSVTGASSARVEWLASGTWPLPWRPRALALGSSALELETLPTGAVHVVRVTDTLQTSPVDVLVSQLLPNWEDVYSLYNSPPAELRPYRVVRAARTYELRWMPPGIALRCALRSATYPSSATHKLVAPLLPGFAFTGKPLNNRA----------VWSAVRPI--------------TVEYDQSDRKAGGPCAYRWTVPLPSRLGTDRSALPPLPP--VESGVEEMEYIALPARYVAARRLAGALESDGAVLAEAEQLAAQLRADGVRTVDGTPSRAAFQFCQYNFKAGFNLAGQLAIA------QYQGTAQPLRRNEILVDIEE 409
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Match: A0A061QPT3_9CHLO (Soul heme-binding protein n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QPT3_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 6.840e-5 Identity = 61/245 (24.90%), Postives = 93/245 (37.96%), Query Frame = 1
Query: 790 LPWLPRFIVKGKSIVDIGSDG-KVVNMSDTWEGNVLGLALKHLVPGFWDLWHQ---LGSPPAEQMP-YKVLKKTWGYEIREYAPRLVYQPSLIDRSNSRELRMALILPGFSHTGELRTSGRNPE-EYFVTGPIEVAIQPIIEKGYFSNGTWFNGTVREASMSRRSNRITWTVPVPTAMGLDVSTLPPPAKGREKGGGQRSRHVRQGFRRIAAINFNGLPQDPEASEVRSKLLSSLAADGVTPNKG 1506
LPW P+ ++ GKSI I D K+ + D W+ + DL+ Q L PA + P Y+VLK+T GYE+REY+P +V + + S GF+ G + +T P+ ++ + G+ + S VP P + + T P +AAI F G P D E + +L S+L DG+ P G
Sbjct: 174 LPWKPKVVLTGKSIYHIDIDARKIRSQVDEWDSASHNRFFS--IEAAADLYRQATRLAVTPALESPEYRVLKRTAGYEVREYSPFVVAETEMDSGSGPAGGS------GFAELARFLFGGNSKRLSMDMTTPVITSV---------AGGSRMQFVMGSQFASPEE------VPAPESPSVACKTADPGV--------------------VAAIEFPGWPLDSEVVDAERRLRSALQRDGLEPLPG 375 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig785.19097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig785.19097.1 >prot_F-serratus_M_contig785.19097.1 ID=prot_F-serratus_M_contig785.19097.1|Name=mRNA_F-serratus_M_contig785.19097.1|organism=Fucus serratus male|type=polypeptide|length=552bp MCHSWRCRVLLGALIFVSCSCRLSLSFMMPTTTLRPSAAACRTADPTRVRback to top mRNA from alignment at F-serratus_M_contig785:112730..118305+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig785.19097.1 ID=mRNA_F-serratus_M_contig785.19097.1|Name=mRNA_F-serratus_M_contig785.19097.1|organism=Fucus serratus male|type=mRNA|length=5576bp|location=Sequence derived from alignment at F-serratus_M_contig785:112730..118305+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig785:112730..118305+ >mRNA_F-serratus_M_contig785.19097.1 ID=mRNA_F-serratus_M_contig785.19097.1|Name=mRNA_F-serratus_M_contig785.19097.1|organism=Fucus serratus male|type=CDS|length=3312bp|location=Sequence derived from alignment at F-serratus_M_contig785:112730..118305+ (Fucus serratus male)back to top |