mRNA_F-serratus_M_contig784.19093.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig784.19093.1
Unique NamemRNA_F-serratus_M_contig784.19093.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 4.140e-103
Identity = 205/393 (52.16%), Postives = 251/393 (63.87%), Query Frame = 1
Query:    1 CRILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAG-----ETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDGYMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAM-GVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVD--TLGIDDQRGVNDRGQTAKTCDSDSSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQHELGHGG 1155
            CRIL LGDGNFSFSLALA+A+L+P    +  S  Q R ++   E+VATSFDG++DL +KY EA GI+A LRS+G TVLHNVDATALDSR           R   + + ++H+IFNHPHTGTEDMRRHRSFLGHFFHAV N+ + +  P     +G     +     ++    G    +GG+    +ILAPGGAVHVTLA DQPERWGL EQAARHGF+L HRRRFPAE IDGYMTKRHQTGRSF++R   S TLSF W    ++           TLPPWL P V M G E+S         RAE ++ +P+   G+     AVD  T  +DD       G+    C +D +G    + + LPEVC LCGKRYK+AQA+RTHTRQ HELG  G
Sbjct:   13 CRILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRR-RAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQGGKG---AILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAARGDDGAAFGSTLPPWLWPEVVMCGDEASPA-------RAETATDEPVRAGGSD----AVDAPTPAVDDNVRTRGGGRKGGGC-TDRTGAAAAEAL-LPEVCELCGKRYKSAQALRTHTRQFHELGQEG 388          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: K3WT47_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT47_GLOUD)

HSP 1 Score: 127 bits (319), Expect = 3.860e-27
Identity = 119/397 (29.97%), Postives = 175/397 (44.08%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATAL-----DSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHR-RRFPAENIDG--YMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAMGVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVDTLGIDDQRGVNDRGQTAKTCDS-----------DSSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQH 1137
            R+LT+GDGNFS+SLA A+  L    F    S++QP       ELVATS+D   +L  KYPE+  I ++LR LGA VLH VDAT L     ++  E  + + A++R     + +D I+FNHPH G E+++RH+S L HFF + L                              NH     +N+ S       +H+TLA  QPERW    +A R    L    R   + N  G  Y  KRHQ G+SF R  L               + Q++T++            +    E+++    +  ++ + SS K    VG+S   +A D+  +  +       ++ KT                 G TG  P+ LP  C  C + +K   A R H   +H
Sbjct:   29 RVLTVGDGNFSYSLAFAKRFLGVSSF--ASSKEQP------IELVATSYDSYDELVEKYPESARICSQLRELGAQVLHRVDATNLAVSLANAVLESRDDDEASSRSVTTQKAFDLIVFNHPHCGEENVKRHQSLLSHFFSSALQIL---------------------------NHA----SNLQS------EIHLTLAVGQPERWEAVARAKRAELTLKQCVRDVDSHNDYGLVYERKRHQNGKSFHRVLLHG-----------EKVQQESTLFIFTQRREGEDDNLVSTSETAKPQQSSSNSQVQESSAKVPGTVGSSRKRKAQDSALMQHEFACEACEKSFKTAQGLKTHAHMVHELSKGGVTG--PVSLP--CGFCDRTFKNEDAQRQHRLAKH 365          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A5D6Y3S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3S2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.250e-26
Identity = 126/409 (30.81%), Postives = 167/409 (40.83%), Query Frame = 1
Query:    7 ILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATAL-------DSRNEGTEREGAAAR-CGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAMGVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVDTLGIDDQRGVNDRGQTAKTCDSD----------SSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQHELGHGGA 1158
            +LT+GDGNFSFSLA AR      RF        PR      +L A+SFD   +L AKYPEA   + +LR+LGA VLH VDAT L       ++   G E  G A R        +D ++FNHPH G E++RRHRS L HF+                         AS R                 +LAP G + +TLA  QP RW    +A R G  L  +     +++D        Y  KRHQ GRSF R  L               L Q++T++           G   G   S+ TA+  G  A  +          S   +A D          N+  ++ KT              S G     P++LP  C LC + +K A A     +QQH L   G+
Sbjct:   16 VLTVGDGNFSFSLAFAR------RF--------PR-----AQLAASSFDSAQELAAKYPEAPRHVHQLRALGARVLHRVDATQLRASLAQAETAEVGDEEGGPAPRPASPLPARFDVVVFNHPHCGEENVRRHRSLLSHFY-------------------------ASAR----------------ELLAPRGEIRLTLAAGQPARWEALARARRAGLRLTQQ----VDDVDSDEAFGLAYERKRHQNGRSFHRVLLHG-----------ERLQQQSTLFIFEREEN---EGEDAGTTGSQETAEGEGAIAAATVATVTPPDAPSRKRKARDAAS--QPFACNECEKSFKTAQGLKTHVHMVHELSGGAAQAAPVLLP--CGLCDRTFKNADA-----QQQHRLAKHGS 337          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A225VJE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJE6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.180e-24
Identity = 93/273 (34.07%), Postives = 132/273 (48.35%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQR------RNLDSVTLSFVWMGQVRSLD 783
            R+LT+GDGNFS+SLALA+          T++  Q         L ATS+D   +L AKYPE++ I  +L+ LGA+VLH VDAT +        RE   A      + +D ++FNHPH G E++RRH+S L HF+ + L+                               LE  E N ++       + +TLA  QPERW   E+A + G  L HR+    +N+D        Y  KRHQ G+SF +      R   S TL F++  Q  ++D
Sbjct:   40 RVLTVGDGNFSYSLALAKQ---------TDTTLQ---------LTATSYDSYDELVAKYPESKRICTQLKELGASVLHRVDATNI--------RESLVAE-----QKFDSVVFNHPHCGEENVRRHQSLLSHFYASALDV------------------------------LEENEENEWN------GILLTLAEGQPERWQAVERAQKAGLRL-HRQ---VDNVDNDEVFGFAYERKRHQNGKSFHQVTLHGERKKQSSTL-FIFRRQKDAMD 240          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A329SAD3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SAD3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.150e-24
Identity = 86/247 (34.82%), Postives = 118/247 (47.77%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQRRNL 732
            R+LT+GDGNFS+SLALA+             Q   +      +L ATS+D   +L AKYPE + I A+L+ LGA+VLH VDAT +        RE   A  G     +D ++FNHPH G E++RRH+S L HF+ + L                                L+G E +  S       + +TLA  QPERW   E+  + G  L HR+    +N +     Y  KRHQ G+SF +  L
Sbjct:   51 RVLTVGDGNFSYSLALAK-------------QHNRQDNDTILQLTATSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNI--------RESLVA-AGAEQLKFDAVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LQGNEEDEES------GILLTLAEGQPERWQAVERGLKAGLRL-HRQIDDVDNDEVFGLVYERKRHQNGKSFHQVTL 238          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A8K1C3C0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C0_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 4.780e-24
Identity = 86/249 (34.54%), Postives = 117/249 (46.99%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPG-GAVHVTLAGDQPERWGLREQAARHGFAL--------AHRRRFPAENIDGYMTKRHQTGRSFQR 723
            ++LT+GDGNFSFSLA  +             QQ  RRE+++  LVA+S+D   +L  KYPE+  I  +L+ LGA +LH +DAT L +  E    E    +       +D IIFNHPH G E++RRH+S L HF+                                          +   +L P  G +H+TLA  QPERW  RE+  + G  L        AH    P  ++D Y  KRHQ G+SF R
Sbjct:   28 QVLTVGDGNFSFSLAYLK-------------QQLQRREQLR--LVASSYDEYQELLEKYPESIRICTQLQELGADLLHRIDATNLRATLEACASENGEVQLPTT---FDVIIFNHPHCGEENVRRHQSLLSHFY-----------------------------------------ASAKELLHPTRGELHLTLADGQPERWEARERGTKAGLVLVEEIEDVDAH----PVYSVD-YERKRHQNGKSFHR 212          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI)

HSP 1 Score: 117 bits (292), Expect = 5.130e-24
Identity = 86/247 (34.82%), Postives = 120/247 (48.58%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQRRNL 732
            R+LT+GDGNF++SLALA+             Q + +      +L A+S+D   +L AKYPE + I A+L+ LGA+VLH VDAT L        RE   A  G     +D +IFNHPH G E++RRH+S L HF+ + L+                               +E  E +  S       + +TLA  QPERW   E+A + G  L HR+    +N +     Y  KRHQ G+SF +  L
Sbjct:   36 RVLTVGDGNFTYSLALAK-------------QHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNL--------RESLVA-AGAEQLKFDAVIFNHPHCGEENVRRHQSLLSHFYASALDV------------------------------IEDNEEDEES------GILLTLAEGQPERWQAVERALKAGLRL-HRQVDEVDNDEVFGLVYDRKRHQNGKSFHQVTL 223          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: G5AE26_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AE26_PHYSP)

HSP 1 Score: 117 bits (292), Expect = 5.580e-24
Identity = 87/251 (34.66%), Postives = 123/251 (49.00%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVK-CELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQRRNL 732
            R+LT+GDGNFS+SLALA+             Q + + +  +  +L ATS+D   +L AKYPE++ I A+L+ LGA+VLH VDAT +        RE   A  G  +  +  ++FNHPH G E++RRH+S L HF+ + L                                LE GE +        G + +TLA  QPERW   ++A   G  L HR+    +N+D        Y  KRHQ G+SF +  L
Sbjct:   37 RVLTVGDGNFSYSLALAK-------------QHKSKGDDTRPLQLTATSYDSYDELVAKYPESKRICAQLKELGASVLHRVDATNI--------RESLVA-AGATSDKFHSVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LEKGEGDEVEQSEESGIL-LTLAEGQPERWQAVQRALSAGLKL-HRQ---VDNVDSDAKFGLEYERKRHQNGKSFHQVTL 230          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A3M6VPR7_9STRA (C2H2-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPR7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.820e-24
Identity = 87/272 (31.99%), Postives = 127/272 (46.69%), Query Frame = 1
Query:    4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQR-----RNLDSVTLSFVWMGQVRSLDQKT 792
            RILTLGDGNFS+SLALA+ +            +    E V  +L+ATS+D   +L  KYPE++ I A+L  LGAT+ H VDAT +   +E     GA  +       +D ++FNHPH G E++RRH+S L HF+ + L                                LE  +         G  + +TLA  QPERW   ++A   G  L +R+    +N D     Y  KRHQ G+SF +       +   +  F++  Q   +D ++
Sbjct:   11 RILTLGDGNFSYSLALAKQL------------KNQGNESVNIQLIATSYDTYEELIGKYPESKRICAQLTQLGATICHRVDATNI---HESLVAAGAEPKL-----RFDAVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LEKKKXXXXXKELRG--ILLTLAERQPERWQAVQRALSAGLTL-YRQVDDVDNDDQFGLVYERKRHQNGKSFHQVTLYGEKMKQTSTLFIFRRQEDDMDTRS 229          
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: D0NMF8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMF8_PHYIT)

HSP 1 Score: 116 bits (291), Expect = 7.910e-24
Identity = 87/246 (35.37%), Postives = 119/246 (48.37%), Query Frame = 1
Query:    7 ILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAEN--IDG--YMTKRHQTGRSFQRRNL 732
            +LT+GDGNFS+SLALA+             Q + +      +L ATS+D   +L AKYPE++ I  +L+ LGA+V+H VDAT L        RE   A  G     +D ++FNHPH G E++RRH+S L HF+ + L                                LE  E +       G  + +TLA  QPERW   E+A + G  L HRR    +N  + G  Y  KRHQ G+SF +  L
Sbjct:   37 VLTVGDGNFSYSLALAK-------------QHKNQGNDTPVQLTATSYDSYNELVAKYPESKRICGQLKELGASVMHRVDATNL--------RESLVA-AGAEQLTFDAVVFNHPHCGEENVRRHQSLLSHFYTSALEI------------------------------LEDSEEDE------GNGILLTLAEGQPERWQAVERALQAGLRL-HRRVDDVDNDAVFGLKYERKRHQNGKSFHQVTL 223          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ6_ECTSI4.140e-10352.16C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=... [more]
K3WT47_GLOUD3.860e-2729.97C2H2-type domain-containing protein n=1 Tax=Globis... [more]
A0A5D6Y3S2_9STRA7.250e-2630.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225VJE6_9STRA2.180e-2434.07Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A329SAD3_9STRA4.150e-2434.82Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A8K1C3C0_PYTOL4.780e-2434.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8CDT8_PHYNI5.130e-2434.82Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
G5AE26_PHYSP5.580e-2434.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A3M6VPR7_9STRA5.820e-2431.99C2H2-type domain-containing protein n=2 Tax=Perono... [more]
D0NMF8_PHYIT7.910e-2435.37Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig784contigF-serratus_M_contig784:364587..368538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.5
Seed ortholog evalue1.1e-81
Seed eggNOG ortholog2880.D7FVZ6
KEGG koko:K19307
Hectar predicted targeting categoryother localisation
EggNOG free text desc.rRNA (uridine-N3-)-methyltransferase activity
EggNOG OGsKOG4174@1,KOG4174@2759
EC2.1.1.313
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons4
Model size3269
Cds size1146
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig784.19093.1prot_F-serratus_M_contig784.19093.1Fucus serratus malepolypeptideF-serratus_M_contig784 364647..366475 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932332.2029376-UTR-F-serratus_M_contig784:364586..3646461622932332.2029376-UTR-F-serratus_M_contig784:364586..364646Fucus serratus maleUTRF-serratus_M_contig784 364587..364646 +
1690964257.523808-UTR-F-serratus_M_contig784:364586..3646461690964257.523808-UTR-F-serratus_M_contig784:364586..364646Fucus serratus maleUTRF-serratus_M_contig784 364587..364646 +
1622932332.278619-UTR-F-serratus_M_contig784:366475..3685381622932332.278619-UTR-F-serratus_M_contig784:366475..368538Fucus serratus maleUTRF-serratus_M_contig784 366476..368538 +
1690964257.582953-UTR-F-serratus_M_contig784:366475..3685381690964257.582953-UTR-F-serratus_M_contig784:366475..368538Fucus serratus maleUTRF-serratus_M_contig784 366476..368538 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932332.2180748-CDS-F-serratus_M_contig784:364646..3646821622932332.2180748-CDS-F-serratus_M_contig784:364646..364682Fucus serratus maleCDSF-serratus_M_contig784 364647..364682 +
1690964257.5371628-CDS-F-serratus_M_contig784:364646..3646821690964257.5371628-CDS-F-serratus_M_contig784:364646..364682Fucus serratus maleCDSF-serratus_M_contig784 364647..364682 +
1622932332.2308512-CDS-F-serratus_M_contig784:365050..3652211622932332.2308512-CDS-F-serratus_M_contig784:365050..365221Fucus serratus maleCDSF-serratus_M_contig784 365051..365221 +
1690964257.5482583-CDS-F-serratus_M_contig784:365050..3652211690964257.5482583-CDS-F-serratus_M_contig784:365050..365221Fucus serratus maleCDSF-serratus_M_contig784 365051..365221 +
1622932332.2477143-CDS-F-serratus_M_contig784:365344..3658621622932332.2477143-CDS-F-serratus_M_contig784:365344..365862Fucus serratus maleCDSF-serratus_M_contig784 365345..365862 +
1690964257.5597353-CDS-F-serratus_M_contig784:365344..3658621690964257.5597353-CDS-F-serratus_M_contig784:365344..365862Fucus serratus maleCDSF-serratus_M_contig784 365345..365862 +
1622932332.262417-CDS-F-serratus_M_contig784:366054..3664751622932332.262417-CDS-F-serratus_M_contig784:366054..366475Fucus serratus maleCDSF-serratus_M_contig784 366055..366475 +
1690964257.570525-CDS-F-serratus_M_contig784:366054..3664751690964257.570525-CDS-F-serratus_M_contig784:366054..366475Fucus serratus maleCDSF-serratus_M_contig784 366055..366475 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig784.19093.1

>prot_F-serratus_M_contig784.19093.1 ID=prot_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=polypeptide|length=382bp
MLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKL
RSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTG
TEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHN
HLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRF
PAENIDGYMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIR
TLPPWLLPGVAMGVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVDT
LGIDDQRGVNDRGQTAKTCDSDSSGRTGIDPIVLPEVCALCGKRYKTAQA
VRTHTRQQHELGHGGARRPRPTGGAAALPAL*
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mRNA from alignment at F-serratus_M_contig784:364587..368538+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig784.19093.1 ID=mRNA_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=mRNA|length=3952bp|location=Sequence derived from alignment at F-serratus_M_contig784:364587..368538+ (Fucus serratus male)
TGCAGGATCCTCACGCTAGGCGATGGAAACTTCTCCTTCTCCCTGGCGCT CGCGCGGGCGATGCTGGTACCGGTAAGATTTATGATAACTGAGAGTGTAC AGGTGTACACAGAGTTTAAGTTAATTGTAGAGTTTTACTAGACCGCTCTT GTGAACATACCGGTACCGCTTTTTTTTGCAAGTTAAAATAAATAAATAAT AATAATAATAATAATGAAAATAGGTTAAAAAAAAAAGACCCTAATATTAA GAGGAAATGGAAGTCGTACGAAAGCGTTGTGTAGAGGGTTGGCAGGAAAG AGCTAGCCCCCACGCAAAGCGCGCTTTTTGAACCGTGGACATCTATCCTC TCGCGTCGCCCGCCGTTGCCTCGAACGTGTTCGTTCCTCGATGTGAACAC ATCCTGGTGACAGCAGCAGAAGGGTCGGCATCAGAAGATGGAGCAGCAGC GGCAGTCGCAAAAGCAGCAGCAACCTCGGCGGGAGCGCGTGAAGTGCGAA CTAGTGGCTACTTCTTTCGACGGGCAGATAGACCTCTTCGCGAAGTACCC GGAGGCGAGGGGCATCTTGGCCAAGCTGCGTTCCTTGGGTGCGACGGTGC TCCATAACGTGGACGCGACGGCGCTCGACTCGAGGGTGATCCTTGAGCCC GAGACGAAGACCCTTAGACACGGGAGAACGAGGCAGCGAAAACCGGGGGA AGAACGAGATATGTCCCCTGGAGAAGACTCTGGAGGGTTTGCCTTGCGAG ACGGCGAGAACGAAGGGACGGAAAGAGAAGGCGCAGCAGCTCGTTGCGGG TATCGCACGCGACACTACGACCACATTATATTCAATCATCCACACACGGG AACAGAGGACATGCGCCGACATCGATCGTTCCTCGGACACTTTTTCCACG CCGTCTTGAACGCCAACGTCCCAGCTATAAATCCCGCCGTCACCACCAAC GCCGGCGAAACCGCAAGCGATGCCAGTTTGAGAACTAACGGTGGGCACAA TCATTTGGAGGGAGGGGAGACCAATGTTTTTTCGATCCTTGCGCCAGGGG GGGCCGTTCACGTGACGCTGGCGGGCGACCAACCGGAGCGCTGGGGGCTC CGTGAGCAGGCCGCGCGGCACGGCTTTGCGCTGGCCCATCGGCGGCGGTT TCCTGCTGAAAATATCGACGGTTACATGACAAAGCGACACCAGACGGGCC GCTCGTTTCAGCGCCGTAACCTCGACAGCGTTACGCTGTCGTTCGTTTGG ATGGGACAGGTTCGTAGTCTTGACCAGTGTATGCTAGTTAACGGTCTGCA GGACCACAGTCCTGAGGACTCTTGCATTTCTCTTCCTGGGGAGGGTACGG GGGATGGGGGTCATCTTAATAGGTCCGTGGAAGAGATCGAAAATGGTTGG TCTCTAGATGGTCATGATTTATTACGTAAACAAGGACACAGCCAAGGGGT TAATGTTGTGAACACAAGGAAAACAACGGTCTACGGTATTCGTACGCTAC CACCATGGCTTTTGCCCGGGGTAGCCATGGGCGTCGAGAGTTCAGAGCGG ACAGCCAAGGCGCTCGGCAACAGGGCAGAGCTCTCTAGCGGCAAGCCTAT CGCGGGCGTGGGCGCAAGTCTTCCAACAAGAGCGGTGGATACCTTAGGGA TCGATGACCAGCGCGGGGTCAACGACAGGGGTCAAACTGCCAAAACCTGC GACAGTGATAGCAGCGGCAGGACGGGAATCGATCCGATTGTGTTACCCGA GGTCTGCGCGCTTTGTGGCAAGAGGTATAAGACAGCCCAAGCGGTGAGAA CGCACACGCGCCAGCAACACGAGCTCGGCCACGGAGGGGCACGGCGTCCT CGGCCGACGGGAGGAGCCGCGGCGTTGCCCGCACTGTGACCGCATGTTTA CTAGCGGCGCAGCCCTGGACCAGCATCTCTTCGCCAAGCACCGCGGCCAA AACGTTGACATCAAGCCTGACTGGAACGTGGGCAGCATCTATCACCTCGA CCCGCCTCGAGTTTCGAGCGGGGACGGCGTTGTGGAGGCGAGCGCGTGCC GTACATGGGCCGCCGATGAGGTATCTCGGGATGAACGGCAAAGGGTCACG ACACGCGGGAGAACGATAGATCAAAACTGCCAGAAAGCAAGCTGTGCCTC CAGCTCAGATTGGACGCAAGCCACCCGTGGCAGCAGTAACGATGACCAAA TTTCTGAGTGCAGCGTTTGCGGGTTCTGGTTCATGACCCCCGAAGATGCT CAGCAGCACCTCGATAACCTGCGCCCGCCGATTGAAGGAGGTGTTGCCAA GTTTGGGTGCGTCCACTGCGCCAGGGAGTTCGGGTCGAGGCGGGCGCTGC TTCAGCACTCGAACTTCTGCGGCCGTACTACTTATGAAGCGGCTTCGTCG AAATCTGCTTCCTCTCGAAAACCGGCGTGAGGCGCGCTCTTGGCGGAGGT GGCAACCTCACGAACCCGTATTTGAGGAGCTATGACAACATTTCACTCGC GTGGTACAAGAGGGATTTTAATTCGAGGGGGAAGCATGCAAGGTTCGTTA CTCCGTCTGCCTGAACCCCACGCGGAGGAGTTCCGCTCTACCACCTGCAT GGACCACGAGGGCTCTTCCTGAGCCATTTCGCTCGAGCAGTCGATTGCGT ATTTTCTCTTATAAAAGCTCTCTATCTTTCGTACGCAGTATTAACTTCTC GTGACGTAGGCCATTCGTGTCTTCTCCCATCAACGGTGACACGTAGGTGT TGTGGACTTTTCTAACCATACCACAACACAAAACGTCACCAGGGATGAAA GTAAAAGCAAAACATTTTCGGACACCGCCTCGATTTTCGTCAACGTGGTG GGGGAACGCACGCGGCACTGACAGCGCGCGGAGCCGTAGCAAAAGCGCCG AAACGAAAAGCGAAACACAGCTTTGGATCGCATGTGATGGAGAAAAAAAA AACGCGCAACACCCCTTCCTCGCCTGACCCTCGAGTAGCCCACGTCTCTT CTACCTTCTATCGTTCAGTAAAATTCCACGCGTATCTTTCACTTCTATCG TAAGCAGCCTCGGCACGGAGCGCGAATCGATAAACAAGCCTGTCGCAATG CTGAGGTGTATATACAATTGAGAACAACATAGGCAGTTGCGGTTGCAGAA CCGCAAGTGCCTACAGCATATTATCAACCCTCCCTGTCGACCCTTACTGG CAAGGGCCACACCCTCGGAGATCTAACCAAGCAAGCTACCGTGTTTTGAC ACTGGCAGTTGCGGTACCCGCAAGTGCCTACACAGCATATTATCAACCCT CCTTGCCGACCCTTATCGGGAAGGGCCACACACCCTCGAAGATCTAACCA AGCAAGCTATCTGTGTGTTTTCTATATAGAAAAACCGCAACAATAGTTTG CCGACGGCCGATCACGTCAACACTCGCCGCGAGAATCACTCCTTTCTCCG AGGCAATGTGTCCCATCTTAATAACAGTGTACATCAGATGATAAGGTACG CCAGTCCTCGAGATGACGTTCAGCAAAGATTTTTAAAATAGATTAAACAC AAGCACGAAAGCCTGGGGCGCCAAATCACCTCCCGCTTCAGTCGTTTGGC CTTCGGTTGCGATTTAACCTGTAGTCGATCGGTCGGGTTACGGCGCGCTC AAATACCCCATGGGGAACCTCAAAACACAGTCCACGATGAAAAACGCTGG AATTTGATACATACTCGAGACCGCTTCCGCCTGACGTGTCGCATAGTATG CGCCCCTTCGACGACAAAGAAATGGGGGGGAGGGGGGGGGGAGCGTGACA AGAACGTTCTACGATCACCTTACACATCGCGCGTTTTTTTTAGCACGCGC GGACGCAATGCCACGCGTGGAGGCGTTTTATCAACGCACCGCTTCCAAAA GACGTATGGACTAGTTACCATAATGCGAAAGCTCCGCCCAGGGGGGAGGG GG
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Coding sequence (CDS) from alignment at F-serratus_M_contig784:364587..368538+

>mRNA_F-serratus_M_contig784.19093.1 ID=mRNA_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=CDS|length=2292bp|location=Sequence derived from alignment at F-serratus_M_contig784:364587..368538+ (Fucus serratus male)
ATGCTGGTACCGGTAAGATTTATGATAACTGAGAGTATGCTGGTACCGGT
AAGATTTATGATAACTGAGAGTCAGCAGCAACCTCGGCGGGAGCGCGTGA
AGTGCGAACTAGTGGCTACTTCTTTCGACGGGCAGATAGACCTCTTCGCG
AAGTACCCGGAGGCGAGGGGCATCTTGGCCAAGCTGCGTTCCTTGGGTGC
GACGGTGCTCCATAACGTGGACGCGACGGCGCTCGACTCGAGGCAGCAGC
AACCTCGGCGGGAGCGCGTGAAGTGCGAACTAGTGGCTACTTCTTTCGAC
GGGCAGATAGACCTCTTCGCGAAGTACCCGGAGGCGAGGGGCATCTTGGC
CAAGCTGCGTTCCTTGGGTGCGACGGTGCTCCATAACGTGGACGCGACGG
CGCTCGACTCGAGGAACGAAGGGACGGAAAGAGAAGGCGCAGCAGCTCGT
TGCGGGTATCGCACGCGACACTACGACCACATTATATTCAATCATCCACA
CACGGGAACAGAGGACATGCGCCGACATCGATCGTTCCTCGGACACTTTT
TCCACGCCGTCTTGAACGCCAACGTCCCAGCTATAAATCCCGCCGTCACC
ACCAACGCCGGCGAAACCGCAAGCGATGCCAGTTTGAGAACTAACGGTGG
GCACAATCATTTGGAGGGAGGGGAGACCAATGTTTTTTCGATCCTTGCGC
CAGGGGGGGCCGTTCACGTGACGCTGGCGGGCGACCAACCGGAGCGCTGG
GGGCTCCGTGAGCAGGCCGCGCGGCACGGCTTTGCGCTGGCCCATCGGCG
GCGGTTTCCTGCTGAAAATATCGACGGTTACATGACAAAGCGACACCAGA
CGGGCCGCTCGTTTCAGCGCCGTAACCTCGACAGCGTTACGCTGTCGTTC
GTTTGGATGGGACAGGTTCGTAGTCTTGACCAAACGAAGGGACGGAAAGA
GAAGGCGCAGCAGCTCGTTGCGGGTATCGCACGCGACACTACGACCACAT
TATATTCAATCATCCACACACGGGAACAGAGGACATGCGCCGACATCGAT
CGTTCCTCGGACACTTTTTCCACGCCGTCTTGAACGCCAACGTCCCAGCT
ATAAATCCCGCCGTCACCACCAACGCCGGCGAAACCGCAAGCGATGCCAG
TTTGAGAACTAACGGTGGGCACAATCATTTGGAGGGAGGGGAGACCAATG
TTTTTTCGATCCTTGCGCCAGGGGGGGCCGTTCACGTGACGCTGGCGGGC
GACCAACCGGAGCGCTGGGGGCTCCGTGAGCAGGCCGCGCGGCACGGCTT
TGCGCTGGCCCATCGGCGGCGGTTTCCTGCTGAAAATATCGACGGTTACA
TGACAAAGCGACACCAGACGGGCCGCTCGTTTCAGCGCCGTAACCTCGAC
AGCGTTACGCTGTCGTTCGTTTGGATGGGACAGGTTCGTAGTCTTGACCA
GAAAACAACGGTCTACGGTATTCGTACGCTACCACCATGGCTTTTGCCCG
GGGTAGCCATGGGCGTCGAGAGTTCAGAGCGGACAGCCAAGGCGCTCGGC
AACAGGGCAGAGCTCTCTAGCGGCAAGCCTATCGCGGGCGTGGGCGCAAG
TCTTCCAACAAGAGCGGTGGATACCTTAGGGATCGATGACCAGCGCGGGG
TCAACGACAGGGGTCAAACTGCCAAAACCTGCGACAGTGATAGCAGCGGC
AGGACGGGAATCGATCCGATTGTGTTACCCGAGGTCTGCGCGCTTTGTGG
CAAGAGGTATAAGACAGCCCAAGCGGTGAGAACGCACACGCGCCAGCAAC
ACGAGCTCGGCCACGGAGGGGCACGGCGTCCTCGGCCGACGGGAGGAGCC
GCGGCGTTGCCCGCACTGTGAGAAAACAACGGTCTACGGTATTCGTACGC
TACCACCATGGCTTTTGCCCGGGGTAGCCATGGGCGTCGAGAGTTCAGAG
CGGACAGCCAAGGCGCTCGGCAACAGGGCAGAGCTCTCTAGCGGCAAGCC
TATCGCGGGCGTGGGCGCAAGTCTTCCAACAAGAGCGGTGGATACCTTAG
GGATCGATGACCAGCGCGGGGTCAACGACAGGGGTCAAACTGCCAAAACC
TGCGACAGTGATAGCAGCGGCAGGACGGGAATCGATCCGATTGTGTTACC
CGAGGTCTGCGCGCTTTGTGGCAAGAGGTATAAGACAGCCCAAGCGGTGA
GAACGCACACGCGCCAGCAACACGAGCTCGGCCACGGAGGGGCACGGCGT
CCTCGGCCGACGGGAGGAGCCGCGGCGTTGCCCGCACTGTGA
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