mRNA_F-serratus_M_contig784.19092.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig784.19092.1
Unique NamemRNA_F-serratus_M_contig784.19092.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: D7FVZ8_ECTSI (Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVZ8_ECTSI)

HSP 1 Score: 664 bits (1712), Expect = 1.340e-229
Identity = 353/459 (76.91%), Postives = 382/459 (83.22%), Query Frame = 3
Query:  702 GGQLQEQGEVLQLAGCDRLTIAPKFLEELQNCTDDVVKQLDPAASAAACTLDKLPNNESAFRLAMNDDAMATSSLPRGIRGFAADIVKLEVTVRERLGVSATPLTNGVSPVTNGSAAV------------------TEFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGGASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKIRTGS 2024
            G   + + EVLQLAGCDRLTIAPKFL ELQ    +VV+ L+ +ASAAACTLDKLP++ESAFRLAMNDD MATS L  GIRGF+AD+VKLE TVR+RLGV+ +                                  TEFDQLA +TTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQM  YQ FV+DAVK AL + G S KERVEAAMD+LSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGR IV LYKAAG+DKSRVLIKIASTWEGIRACEILQKEGISCNMTLLF +AQAVACAEAGATLISPFVGRITDWYKADTGRSGY  EEDPGCLSV+EI+GYYKK GH TIVMGASFRNK QILQLAGCDRLTIAPKFLE LK+GTE VERKL+P +A+ +YSGGR+PAD+KSFRLKLNE+AMATEKLAEGIASFSQAIVKVEKII DKI   S
Sbjct:  235 GASFRSKDEVLQLAGCDRLTIAPKFLAELQESNGEVVQHLEASASAAACTLDKLPSSESAFRLAMNDDPMATSKLAEGIRGFSADLVKLEATVRDRLGVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEFDQLAEVTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMPAYQGFVDDAVKHALGLQG-SPKERVEAAMDKLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRSIVALYKAAGIDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFCMAQAVACAEAGATLISPFVGRITDWYKADTGRSGYAAEEDPGCLSVSEIFGYYKKHGHGTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKSGTEKVERKLEPETASTAYSGGRYPADLKSFRLKLNENAMATEKLAEGIASFSQAIVKVEKIITDKIAAAS 692          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: A0A6H5KHP6_9PHAE (Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP6_9PHAE)

HSP 1 Score: 567 bits (1461), Expect = 7.360e-196
Identity = 308/414 (74.40%), Postives = 327/414 (78.99%), Query Frame = 3
Query:  894 MNDDAMATSSLPRGIRGFAADIVKLEVTVRERLGVSATPLTNGVSPVTNGSAAV-------------------TEFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGGASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEA------------------LKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKIRTGS 2024
            MNDD MATS L  GIRGF+AD+VKLE TVR+RLGV+ +                                   TEFDQLA +TTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQM  YQ  V+DAVK AL + G   KERVEAAMD+LSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGR IV LYKAAG+DKSRVLIKIASTWEGIRACEILQKEGISCNMTLLF +AQAVACAEAGATLISPFVGRITDWYKADTGRSGY  EEDPGCLSV+EIYGYYKK GH TIVMGASFRNK QILQLAGCDRLTIAPKFLE                   LK GTE VERKL+P +A+K+YSGGR+PAD KSFRLKLNE+AMATEKLAEGIASFSQAIVKVEKII D+I   S
Sbjct:    1 MNDDPMATSKLAEGIRGFSADLVKLEATVRDRLGVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEFDQLAEVTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMPAYQGLVDDAVKHALGLQGLP-KERVEAAMDKLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRSIVALYKAAGIDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFCMAQAVACAEAGATLISPFVGRITDWYKADTGRSGYAAEEDPGCLSVSEIYGYYKKHGHGTIVMGASFRNKGQILQLAGCDRLTIAPKFLEVGEDXXXXXXXXXXYGNGELKGGTEKVERKLEPETASKAYSGGRYPADSKSFRLKLNENAMATEKLAEGIASFSQAIVKVEKIITDRIAAAS 413          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: W7U1X5_9STRA (Transaldolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1X5_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 2.730e-145
Identity = 236/439 (53.76%), Postives = 312/439 (71.07%), Query Frame = 3
Query:  702 GGQLQEQGEVLQLAGCDRLTIAPKFLEELQNCTDDVVKQLDPAASAAACTLDKLPNNESAFRLAMNDDAMATSSLPRGIRGFAADIVKLEVTVRERLGVSATPLTNGVSPVTNGSAAVTEFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVK--KALAMGGASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKI 2012
            G   + +GE+  LAGCDRLTI+P  L+EL++C D + + L+P   ++    +++  +E +FRLAMN DAMAT+ L  GIRGFAADI KLE  + + L          V P         +F QLA  TT+V D+G++EAI++ KPTDATTNPSLI+ AA + +Y+  V+ A+   KA+A  G S KER++  +DRL+VNFG EI KIVPGYVSTEVDARLS+DT+ T+A+ RRI+ +YK  G+ K R+LIKIASTWEGI+A E L++EG+  N+TLLFSLAQAVA AEAGATL+SPFVGRI DW+K +TG++  + EEDPG  SV +IYGYYKK+G+ETIVMGASFRNK +I  LAGCDRLTI+P  L+ LK   + + R L+   AA  Y G +   + K+FR  +N  AMAT+KLAEGI  F+  I K+E +IA ++
Sbjct:  234 GASFRNKGEITALAGCDRLTISPGLLDELKDCHDPLPRVLEPENGSSFYDGERIRVDEKSFRLAMNADAMATAKLAEGIRGFAADIEKLEAMIAKML----------VPPSD-------QFSQLAVFTTLVCDTGDVEAIKRLKPTDATTNPSLIFKAASLPQYKPLVDSAIAAGKAVADAGMSLKERLDLILDRLAVNFGAEITKIVPGYVSTEVDARLSFDTDQTLARARRIIGMYKELGISKERILIKIASTWEGIKAAEALEQEGVKTNLTLLFSLAQAVAAAEAGATLVSPFVGRILDWWKKETGKTFADAEEDPGVQSVRQIYGYYKKYGYETIVMGASFRNKGEITALAGCDRLTISPGLLDELKDCHDPLPRVLEASKAAAVYGGPKLHMNEKAFRFAMNADAMATDKLAEGIRGFAADIEKLEAMIAKRL 655          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: A0A8K1CJ33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ33_PYTOL)

HSP 1 Score: 416 bits (1070), Expect = 4.700e-138
Identity = 211/319 (66.14%), Postives = 254/319 (79.62%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGGA-SEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKI 2012
            + DQL   TT+VAD+G+I +I KYKP DATTNPSL++ AA ME+Y+  V+DAV+   A+  + SE++R+   +D+LSVNFGLEILKIVPGYVSTEVDARLS+DTEAT+ +  RI++LY+ AG+ K R+LIKIASTWEGI+AC+ LQ+EGISCNMTLLF  AQAVACAEA ATLISPFVGRI DWYKA TG++GYE  EDPG LSVT+IY YYKK+GH+TIVMGASFRN  +I +LAGCDRLTI+P  L+ L   T  V RKLDP SAA +Y G     D KSFRL LNE AMATEKLAEGI  FS  IVK+E+I+  K+
Sbjct:   13 QLDQLKEFTTVVADTGDIASIAKYKPQDATTNPSLLFKAATMEQYKHLVDDAVQYGKALDASLSEEDRLAHIIDKLSVNFGLEILKIVPGYVSTEVDARLSFDTEATIERAHRIIKLYEDAGISKDRILIKIASTWEGIQACKHLQQEGISCNMTLLFGFAQAVACAEANATLISPFVGRILDWYKAKTGKAGYESHEDPGVLSVTKIYQYYKKYGHKTIVMGASFRNTGEITELAGCDRLTISPNLLDELSESTTPVIRKLDPESAAMNYVGDSVSFDEKSFRLSLNEDAMATEKLAEGIRGFSADIVKLEEILKAKL 331          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: A0A662XW57_9STRA (Transaldolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XW57_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 4.400e-136
Identity = 207/319 (64.89%), Postives = 250/319 (78.37%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAM-GGASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKI 2012
            + DQL   TT+VAD+G+ E I KYKP DATTNPSL++ AAQME+Y S V+DAV     +    SEK+R+   +D+LSVNFGLEILKIVPGYVSTEVDARLS+DTEAT+A+  RI+ELY+ AG+ K R+LIKIASTWEGI+AC+ LQKEGISCNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA TG+S YE  EDPG +SVT+IY YYKK+G++TIVMGASFRN  +I +L GCDRLTI+P  LE L   T+ +E+KLD   +AK+Y G +     K FRL +NE AMATEKLAEGI  FS  IVK+E+I+  K+
Sbjct:   14 QLDQLKQFTTVVADTGDFEQINKYKPQDATTNPSLLFKAAQMEQYSSLVDDAVAYGKGLPADVSEKDRLGYIIDKLSVNFGLEILKIVPGYVSTEVDARLSFDTEATIARAHRILELYEKAGITKDRILIKIASTWEGIQACKQLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYEAHEDPGVVSVTKIYQYYKKYGYKTIVMGASFRNTGEITELTGCDRLTISPNLLEDLTKSTDKLEKKLDEEESAKAYVGEKISYAEKDFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKL 332          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: A0A484E7C0_BRELC (Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C0_BRELC)

HSP 1 Score: 409 bits (1051), Expect = 3.520e-135
Identity = 202/315 (64.13%), Postives = 250/315 (79.37%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGG-ASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKII 2000
            + DQL   TT+VAD+G+ + I+KYKP DATTNPSL++ AAQM++Y + V+DAV     +    SEKER+   +D+L+VNFGLEILK+VPGYVSTEVDAR+S+DTEAT+A+  RI+ELY+ AG+ K R+LIKIASTWEGI+AC  LQKEGISCNMTLLF  AQAV+CAEAGATLISPFVGRI DW+KA TG++ YEP EDPG +SVT+IY YYKK+ +ETIVMGASFRN  +I +LAGCDRLTI+P  LE L   T  + +KLDP +A K+Y+G +     K FRL +NE AMATEKLAEGI  FS  IVK+E+I+
Sbjct:   14 QLDQLKQYTTVVADTGDFDQIKKYKPQDATTNPSLLFKAAQMDQYSALVDDAVAYGKGLSADLSEKERLGFVVDKLAVNFGLEILKVVPGYVSTEVDARMSFDTEATIARAHRIIELYEKAGIKKDRILIKIASTWEGIQACRHLQKEGISCNMTLLFGFAQAVSCAEAGATLISPFVGRILDWHKAKTGKTSYEPHEDPGVVSVTKIYQYYKKYEYETIVMGASFRNTGEITELAGCDRLTISPALLEELNTATAKLVKKLDPETAIKAYTGEKISYAEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQIL 328          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: H3G883_PHYRM (Transaldolase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G883_PHYRM)

HSP 1 Score: 408 bits (1048), Expect = 9.940e-135
Identity = 203/319 (63.64%), Postives = 251/319 (78.68%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGG-ASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKI 2012
            + DQL   TT+VAD+G+ E I K+KP DATTNPSL++ AAQME+Y S V+DAV     +    SEKER+   +D+LSVNFGLEILK+VPGYVSTEVDARLS+DTE+T+A+  RI++LY+ AG+ K R+LIKIASTWEGI+AC+ LQ+EGISCNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA TG+S YE  EDPG +SVT+IY YYKK+ ++TIVMGASFRN  +I +LAGCDRLTI+P  LE L   T  +E+KLD  +A K+Y+G +   D K FR+ +NE AMATEKLAEGI  FS  IVK+E+I+  K+
Sbjct:   14 QLDQLKQFTTVVADTGDFEQINKFKPQDATTNPSLLFKAAQMEQYSSLVDDAVAYGKGLSADLSEKERLGYVIDKLSVNFGLEILKVVPGYVSTEVDARLSFDTESTIARAHRIIDLYEKAGIKKDRILIKIASTWEGIQACKKLQEEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVTKIYQYYKKYDYKTIVMGASFRNTGEITELAGCDRLTISPNLLEELTKTTTKLEKKLDSETAGKAYTGEKLSYDEKDFRVSMNEDAMATEKLAEGIRGFSADIVKLEQILKAKL 332          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: K3WK76_GLOUD (Transaldolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK76_GLOUD)

HSP 1 Score: 407 bits (1046), Expect = 1.920e-134
Identity = 205/321 (63.86%), Postives = 247/321 (76.95%), Query Frame = 3
Query: 1056 TEFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGGA-SEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKIR 2015
            T+ DQL   TT+VAD+G+ ++I KYKP DATTNPSL+Y AA ME+Y   V+DAV     +  + SE ER+   +D+LSVNFGLEILKIVPGYVSTEVDARLS+D EAT+A+  RI+E+YK AG+ K R+L+KIASTWEGI+AC+ LQ EGISCNMTLLF  AQAV CAEA ATLISPFVGRI DW+KA TG+S YE  EDPG +SV++IY YYKKFG++TIVMGASFRN  +I +LAGCDRLTI+P  L+ L   TE + RKLD  SAA  Y+G +     K FRL LNE AMATEKLAEGI  FS  IVK+E I+  K++
Sbjct:   12 TQLDQLKEFTTVVADTGDFDSIAKYKPQDATTNPSLLYKAATMEQYAHLVDDAVAYGKGLDASISESERLGYIIDKLSVNFGLEILKIVPGYVSTEVDARLSFDKEATIARAHRIIEMYKKAGISKDRILVKIASTWEGIQACKELQAEGISCNMTLLFGFAQAVGCAEANATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVSKIYQYYKKFGYKTIVMGASFRNVGEITELAGCDRLTISPNLLDELSKSTEPISRKLDEESAAAKYTGEKLSLSEKGFRLSLNEDAMATEKLAEGIRGFSADIVKLEDILKAKLK 332          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: A0A0P1AH91_PLAHL (Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH91_PLAHL)

HSP 1 Score: 406 bits (1044), Expect = 3.970e-134
Identity = 204/320 (63.75%), Postives = 249/320 (77.81%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGG-ASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKIR 2015
            + D+L   TT+VAD+G+   I K+KP DATTNPSL+Y AAQME+Y + V+DAV     +    +EKER+   +D+LSVNFGLEILK+VPGYVSTEVDARLS+DT+ T+A+  RI+ELY+ AG+ K R+LIKIASTWEGI+AC+ LQKEGISCNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA  G+S YEP EDPG +SVT IY YYKK+ ++TIVMGASFRN  +I +LAGCDRLTI+P  LE L   TE + +KLDP +AAK+ S  +   D K FRL +NE AMATEKLAEGI  FS  IVK+E+I+  K+R
Sbjct:   14 QLDRLKQFTTVVADTGDFGQINKFKPQDATTNPSLLYKAAQMEQYSALVDDAVAYGKGLSADLTEKERLGYVIDKLSVNFGLEILKVVPGYVSTEVDARLSFDTKNTIARAHRIIELYEKAGIQKDRILIKIASTWEGIQACKHLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKIGKSSYEPHEDPGVVSVTSIYQYYKKYNYQTIVMGASFRNTGEITELAGCDRLTISPALLEELAESTEALTKKLDPETAAKACSIEKLSFDEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKLR 333          
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Match: F0W139_9STRA (Transaldolase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W139_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 8.350e-131
Identity = 199/319 (62.38%), Postives = 243/319 (76.18%), Query Frame = 3
Query: 1059 EFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEYQSFVEDAVKKALAMGG-ASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEVDARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEPEEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPKFLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEKLAEGIASFSQAIVKVEKIIADKI 2012
            + +QL   TT+V D+G+  AI KYKP DATTNPSL+  AA ME+Y+  +EDA+     +G   S+++R+   +D+LSVNFGLEILKIVPGYVSTEVDARLS+DTE T+ +  RI+ LY+  G+ K R+LIKIASTWEGI+AC+ L+KEGI CNMTLLF  AQA ACAEAGATLISPFVGRI DWYKA TG S Y+ EEDPG +SVT +Y Y+KKFG++TIVMGASFRN E+IL+LAGCDRLTI+P  LE L      + RKLD  SAAKSY G +     K FRL +N+ AMATEKLAEGI  FS  IVK+E I++ K+
Sbjct:    4 QLEQLKSFTTVVIDTGDFGAIAKYKPQDATTNPSLLLKAASMEQYKHLIEDAIAYGKTLGSEVSDRDRLAHVVDKLSVNFGLEILKIVPGYVSTEVDARLSFDTEETMERAHRIITLYQEKGIGKDRILIKIASTWEGIQACKQLEKEGIHCNMTLLFGFAQAAACAEAGATLISPFVGRIMDWYKAKTGVSSYKSEEDPGVVSVTNVYRYFKKFGYKTIVMGASFRNTEEILELAGCDRLTISPALLEELSTKQTPITRKLDEESAAKSYQGEKLSLPEKDFRLMMNDDAMATEKLAEGIRGFSADIVKLEAILSGKM 322          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig784.19092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ8_ECTSI1.340e-22976.91Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KHP6_9PHAE7.360e-19674.40Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
W7U1X5_9STRA2.730e-14553.76Transaldolase n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A8K1CJ33_PYTOL4.700e-13866.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XW57_9STRA4.400e-13664.89Transaldolase n=2 Tax=Nothophytophthora sp. Chile5... [more]
A0A484E7C0_BRELC3.520e-13564.13Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 R... [more]
H3G883_PHYRM9.940e-13563.64Transaldolase n=20 Tax=Peronosporaceae TaxID=4777 ... [more]
K3WK76_GLOUD1.920e-13463.86Transaldolase n=1 Tax=Globisporangium ultimum (str... [more]
A0A0P1AH91_PLAHL3.970e-13463.75Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4... [more]
F0W139_9STRA8.350e-13162.38Transaldolase n=1 Tax=Albugo laibachii Nc14 TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig784contigF-serratus_M_contig784:310432..318041 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score582.0
Seed ortholog evalue2e-163
Seed eggNOG ortholog2880.D7FVZ8
Preferred nameTALDO1
KEGG rclassRC00439,RC00604
KEGG koko:K00616
KEGG ReactionR01827
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007
Hectar predicted targeting categoryother localisation
GOsGO:0001300,GO:0003674,GO:0003824,GO:0004801,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0005997,GO:0005999,GO:0006002,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009052,GO:0009058,GO:0009117,GO:0009987,GO:0010033,GO:0016051,GO:0016740,GO:0016744,GO:0019221,GO:0019321,GO:0019322,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0023052,GO:0030246,GO:0031974,GO:0031981,GO:0032502,GO:0033554,GO:0034097,GO:0034599,GO:0034641,GO:0035722,GO:0036094,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046483,GO:0046496,GO:0048029,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051186,GO:0051716,GO:0055086,GO:0065007,GO:0070013,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901576
EggNOG free text desc.sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
EggNOG OGsCOG0176@1,KOG2772@2759
EC2.2.1.2
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons11
Model size2030
Cds size1137
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig784.19092.1prot_F-serratus_M_contig784.19092.1Fucus serratus malepolypeptideF-serratus_M_contig784 315655..318041 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932331.9729044-UTR-F-serratus_M_contig784:310431..3106541622932331.9729044-UTR-F-serratus_M_contig784:310431..310654Fucus serratus maleUTRF-serratus_M_contig784 310432..310654 +
1690964257.3900478-UTR-F-serratus_M_contig784:310431..3106541690964257.3900478-UTR-F-serratus_M_contig784:310431..310654Fucus serratus maleUTRF-serratus_M_contig784 310432..310654 +
1622932332.013016-UTR-F-serratus_M_contig784:314073..3142571622932332.013016-UTR-F-serratus_M_contig784:314073..314257Fucus serratus maleUTRF-serratus_M_contig784 314074..314257 +
1690964257.4016254-UTR-F-serratus_M_contig784:314073..3142571690964257.4016254-UTR-F-serratus_M_contig784:314073..314257Fucus serratus maleUTRF-serratus_M_contig784 314074..314257 +
1622932332.0275455-UTR-F-serratus_M_contig784:314481..3146021622932332.0275455-UTR-F-serratus_M_contig784:314481..314602Fucus serratus maleUTRF-serratus_M_contig784 314482..314602 +
1690964257.4101615-UTR-F-serratus_M_contig784:314481..3146021690964257.4101615-UTR-F-serratus_M_contig784:314481..314602Fucus serratus maleUTRF-serratus_M_contig784 314482..314602 +
1622932332.0417926-UTR-F-serratus_M_contig784:314808..3150621622932332.0417926-UTR-F-serratus_M_contig784:314808..315062Fucus serratus maleUTRF-serratus_M_contig784 314809..315062 +
1690964257.4189463-UTR-F-serratus_M_contig784:314808..3150621690964257.4189463-UTR-F-serratus_M_contig784:314808..315062Fucus serratus maleUTRF-serratus_M_contig784 314809..315062 +
1622932332.0545175-UTR-F-serratus_M_contig784:315275..3153531622932332.0545175-UTR-F-serratus_M_contig784:315275..315353Fucus serratus maleUTRF-serratus_M_contig784 315276..315353 +
1690964257.4278789-UTR-F-serratus_M_contig784:315275..3153531690964257.4278789-UTR-F-serratus_M_contig784:315275..315353Fucus serratus maleUTRF-serratus_M_contig784 315276..315353 +
1622932332.0715094-UTR-F-serratus_M_contig784:315621..3156541622932332.0715094-UTR-F-serratus_M_contig784:315621..315654Fucus serratus maleUTRF-serratus_M_contig784 315622..315654 +
1690964257.4369125-UTR-F-serratus_M_contig784:315621..3156541690964257.4369125-UTR-F-serratus_M_contig784:315621..315654Fucus serratus maleUTRF-serratus_M_contig784 315622..315654 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932332.0867734-CDS-F-serratus_M_contig784:315654..3160001622932332.0867734-CDS-F-serratus_M_contig784:315654..316000Fucus serratus maleCDSF-serratus_M_contig784 315655..316000 +
1690964257.4510796-CDS-F-serratus_M_contig784:315654..3160001690964257.4510796-CDS-F-serratus_M_contig784:315654..316000Fucus serratus maleCDSF-serratus_M_contig784 315655..316000 +
1622932332.1002336-CDS-F-serratus_M_contig784:316161..3163411622932332.1002336-CDS-F-serratus_M_contig784:316161..316341Fucus serratus maleCDSF-serratus_M_contig784 316162..316341 +
1690964257.4613404-CDS-F-serratus_M_contig784:316161..3163411690964257.4613404-CDS-F-serratus_M_contig784:316161..316341Fucus serratus maleCDSF-serratus_M_contig784 316162..316341 +
1622932332.1145988-CDS-F-serratus_M_contig784:316701..3168231622932332.1145988-CDS-F-serratus_M_contig784:316701..316823Fucus serratus maleCDSF-serratus_M_contig784 316702..316823 +
1690964257.4714942-CDS-F-serratus_M_contig784:316701..3168231690964257.4714942-CDS-F-serratus_M_contig784:316701..316823Fucus serratus maleCDSF-serratus_M_contig784 316702..316823 +
1622932332.1301517-CDS-F-serratus_M_contig784:316982..3172431622932332.1301517-CDS-F-serratus_M_contig784:316982..317243Fucus serratus maleCDSF-serratus_M_contig784 316983..317243 +
1690964257.4803216-CDS-F-serratus_M_contig784:316982..3172431690964257.4803216-CDS-F-serratus_M_contig784:316982..317243Fucus serratus maleCDSF-serratus_M_contig784 316983..317243 +
1622932332.147959-CDS-F-serratus_M_contig784:317454..3175491622932332.147959-CDS-F-serratus_M_contig784:317454..317549Fucus serratus maleCDSF-serratus_M_contig784 317455..317549 +
1690964257.496709-CDS-F-serratus_M_contig784:317454..3175491690964257.496709-CDS-F-serratus_M_contig784:317454..317549Fucus serratus maleCDSF-serratus_M_contig784 317455..317549 +
1622932332.160374-CDS-F-serratus_M_contig784:317908..3180411622932332.160374-CDS-F-serratus_M_contig784:317908..318041Fucus serratus maleCDSF-serratus_M_contig784 317909..318041 +
1690964257.5099013-CDS-F-serratus_M_contig784:317908..3180411690964257.5099013-CDS-F-serratus_M_contig784:317908..318041Fucus serratus maleCDSF-serratus_M_contig784 317909..318041 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig784.19092.1

>prot_F-serratus_M_contig784.19092.1 ID=prot_F-serratus_M_contig784.19092.1|Name=mRNA_F-serratus_M_contig784.19092.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MNDDAMATSSLPRGIRGFAADIVKLEVTVRERLGVSATPLTNGVSPVTNG
SAAVTEFDQLAGMTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMEEY
QSFVEDAVKKALAMGGASEKERVEAAMDRLSVNFGLEILKIVPGYVSTEV
DARLSYDTEATVAKGRRIVELYKAAGVDKSRVLIKIASTWEGIRACEILQ
KEGISCNMTLLFSLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYEP
EEDPGCLSVTEIYGYYKKFGHETIVMGASFRNKEQILQLAGCDRLTIAPK
FLEALKAGTEHVERKLDPYSAAKSYSGGRFPADIKSFRLKLNESAMATEK
LAEGIASFSQAIVKVEKIIADKIRTGSE*
back to top

mRNA from alignment at F-serratus_M_contig784:310432..318041+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig784.19092.1 ID=mRNA_F-serratus_M_contig784.19092.1|Name=mRNA_F-serratus_M_contig784.19092.1|organism=Fucus serratus male|type=mRNA|length=7610bp|location=Sequence derived from alignment at F-serratus_M_contig784:310432..318041+ (Fucus serratus male)
ATGGTGTCACCAACAGTTAAGAAGATGAAGATGGGCGAGACGCAGTTCGA CAAGCTTGCCGAGCTAACTACGATCGTGGCAGACACGGGTGAAATCGCCC AGATTAAGAAGTACAAGCCCACCGATGCGACGACTAACCCGTCGCTGCTG TACAAAGCCGCGTCTGCACCCGAGCACCAAGACCTCGTGAACGAAGCTAT CGCTTACGGAAAGGGTCTTAAAGGTGCGAGAGTTATGATTTGGGATGACG GGTCTTGCTGCATCTATGATTCAGAGGATGCAGAATCTGCATGTTTGATG CGTCGGCCCAAGTCGGTTCAACATAATAGGGTGGCCCGCACAAAGCAAAT GTTCGAGGTAGCCCACCTGTAGGCTCCTTCGAGTGTCGGCAACCGTTAGC CTATGGAAATGATTAGATGTTCGAATCACGCCAGTCGCGTAGCGGTCATT TAGTTTTCTCCCGACCCACATTTTCACTTAGCTGCCTAGACCACCCAGTT TCGTACCAGCTAGGGCTTGTATCGATGCTTCAAATACAGGGGTACAGTCC TGCTGTAAGAGCTGTTGACAAGGTTTTCATCATACGGAAAATCTGAACGT ATCCACTAATAATACTGTAGACCTTCTGAGCATCCCCCAGTCAGGGGGAA GAATGTCAAAACGTTTAGGTGGGATCATCGGCTGCAAAGACCAAACCTCT CGTAACCTCTCGTACTCTTTGCAATTCGACACATTTGAGAAGCTAAACGT AAGGCCATAGGTCTAGTCTATATTTCTGCAAGCACAGTCCTGTACCTGGT ACGTTCTTGCATCACGTTACGATTCAGCGATACAAGCAGAGGATTAGCAA GCCATGTCCGGGGTTGATGCCCAATTTGCTCAACAAGATGACCACACCTG ACAGACACACACTGCTGTGATGTACAGGTTTTCAAGTGCGAAATACGCAA AGTATAGTATTGAGAGTCATAAATATAGTACAAATAGAGCTACAGCTACA GTAAACACAGTATGTTGACAGCAGTACCTGTGATGTCGGGATAACGTTGA GCCTCTTTCTCTCCGAGATTTTGTCTTGAACGAAATATGTAGCGACGACA GCAGCGACAGCAGTAGCAAACAGCATGTCTAGTACTTCGCACTCTGTACC CATCTACTGTTTACTATTTACCCATTAATTTAATTGCTCTATTTTATGTA TCTGTGCTGACAGCAAATCTGCATCTAACCAAGTATTAATACGATATCAT ACCAGGCTAATGTATCATCGTCACTTTTAGCAGACGGGGCATATCCTGAA CCGGGGATGTTTTATCAATCCTTCTCAGCTATCATAGGCAGAGACCATGA AATATCCACTCGAACAAATGCCATCGAGGTTTCTCGGATTTTTGTTTTTG CCACGAATTGTAAAGAAAATTCCGATCACGATGAATTAATCCTTCGACAT TTTTTCCCCCTGATTGGGTGGATGGATGGTCAGAAGGTTCAGACGCGTTC AGATTTTTCTTTAAATCTTCCTACCGGTATACTTTAGCCATCGCACATTA ACATATCCACTTCATACTAATACTAATAATAGTATAGTGGGTGTGGGAAA AAAGAGGCGCGTATTGATTGGTCATAGTCCATAATGACATGACACCTGAA AAGGCAGCACCCGTTACTGAAAGTACCTTGAGGACTACTGGCACTGTCTG TGCCGGCCGACTTTCGGCAGTAAACGCCATCGGTACGCAATTGCGTGACC TGATAAAACTCTTACCAGTAGTGATTTGGCGGTGTAAATGGATAAATGGA CGCCGCCGCAGAAGCGGGAAAAATCCCGTGGTAAGCACCAGATTCAGCCT TGAGTGTGGAGAATTGAGCAGTCTGACGCGGGACGGGACGGCCGAACCTG TCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGAAATATTTATT TACCCTGTTCAGCTGACCACGAGCAGGATACGATGCATACATACATACCA GGTACTCCATACATACGTGCCGTACTGGGAGCTTCAGCTGACTTGGCGAA AGCTACTCGTTGCGATGATCTCCTCCCAGGACCACCTGAACAAACAAACA AAAACAAAACATAATTGTTGAAGAAAGTTATCAGAAGAGTCGAAAAACAG GTCTAGGTGCATTCAGATTTTTTCTTCAAAACAGTTGTCATTTACTGTGT AGCAGTTTGCCAACGGAAAAAGAAAAGAGAGGAAGTTGTAATGTTTAAAG AAAATCAGAACAGCACCTAGACCTTTTGAGCATCCCCCGGTTAGGGGGGG GGAAATGTCAAAACGTTCTGGTGGGATCAAAGGTTGTTCATAATAGTGGC TGACGGTTATGGGAGGGTTACCGGGGTAATCTATTAATAATAAACAAGGG TGCGGGTAGATGGGGGATGGTTTACTAGAGCTGTCCTCGTGCGCATTTTG TGGCCGCCGACCCTCGAGTTCGAGACTGCTGTGGTCGTACTGCGACGGAG GATCACCTTGCCTTGGTGTTTCAGGAAGCACGAAAACACTCGAGCTCGTT CCTTCGTTGTTTTTGTGCCGGGCCGCTTGGCGGCCGTTCGACACGAACCA TATACCAGTGTACACGTAGGCAGTGTCATTGCAACAGTGCAAACAGTGGT GTTTGCTACTATTAATAAGAACATAATGGGAGAACATAGACTATATCTAT AAACATGAATACTGTAGCATAAAGGCAGTCTGTTACAATACTTGTGTAGA GtTTTTGAGCAAGGAAATACTGCTGGGCACACGAAAACATTGACGAAAAT CTGCGCCCTAAATTGCAACATCCCATGACGAGTAAGCTGTAGACTTGCAA CCAACTATCTGTCTTGCGCGATTCAGCCGGTCGGTTGAGACGCGGCGGCG GTTTAGTTGGTTGGGGAAGGTGTTCACCAGGCGCGCCTCTTCCGACCTCT AATTTGGTGCCCTTCGGGAGGTGGTGACACGCGAGAGTCAACAACAATAA ACAACATATCCCCGCTTTGTCTAAGCCACAGCGCTTCGAGGTTGCTCGGG TCGTTCCTACTCTCTCTCTCGCATTTACCCGCCTCAACTGTTGTCAACTG TCGTCAACCAACTGTCCCAATTGCAGCACTACCCATGATACAACGGCAAC GGTCGGCGTCCTCGTTTTCGCACCGCTTGACCTTTAGTAACATTAGAGCT GTAAATAATACAACAGTAATAATGTCTGGTACCTCATTTTCCCCACCCCC GTCCCCGTGCTTGTAGAGCCTCTTTTGGGTGATATGCCTATTTTCAATCT TTTTTAACAGTCCTGTGGTGTGGTCGTGCAGTGCCACACCGCGGAATGAG ACAAACGGCCGTCGTTTCCCACGCGGAAGGCCCACGTCTTTTTCTTCCCC CTCATTCAACGATCTAGGCCATATTCCCTATTTATTTCGTAAACAGTACA GTACCTACTAATACTGAATCGTCAAAAACACCGACTTTCTCCCCCCCCCC TGCATGAAAGCCTCCTCTTGCACGCGGTAGTTTTGATACTTTGTCAGGAT TTGTTTTTTTATCTATCAAGCCTTCACAGTCCGAGTGCTGTATCGTTCCC CCCTGATACTCTATACTCTATTGCGTACCTTAATATGGACAGGAGTGAGC GATGACGAGCGCGTCGCCATGACCATGGACAAACTGTCGGTAAACTTCGG CGTGGAGATTCTCTCGCTGGTGGAGGGGTACGTATCGACGGAGGTTGACG CAAGGCTCAGCTTCGACACGGAGGCAACGCTCGAGCGTGCGCGCAACATC ATCGCGCTCTACAAAGCGGCTGGTGAGTGAGGTGGAATGGCGTCAAAGGC GTGTAAGGTGTTGAGGCTTCGTAACAGAAAGAGCCTCGGGCTGTGGAGTG GCATTGCGGAGAAGGGGATAGGGGGAGGCTGGTTCTGTTCTGGCACCTTC GTCTTGTTTCATAGGGGAAGATGGCAATTTTCCCTGTATCGTGTAATTTC GGAAGAATCTAGTGACCGACGCTGGACACCCCTCCCCCGCATGCGAACAG GCGTGGACAAGTCTCGAATCTGATCAAGATCGCGAGCACCTGGGAGGGCA TCCGCGCTTGCGAGATCCTTCAGAAGGAGGGCATCTCGTGCAACATGACC CTGCTCTTCGCCCTGCCTCAGGTGAGGGTTTTCACTTAGTCTCACGAGAG GGGAAAACGAGAGGCTTTCGACAGAATTGGACTGTTTTATACGGAATCGG GGTGAAGGAAATGCGCCTTCCGTACGATAAGGACTCCTCGTTCGATCTTT CTAGTCTGTTTTCGTGCCATCCTTCAACTCAATGTCGACACTTTTGGGAA ACCTCTTCTTCCGCGTTGAAATCTCAGGCAGCGGCTTGCGCCGATGCTGG AGCCACCTTGATCTCGCCCTTCGTGGGACGCATCCTAGACTTCTACAAAA AGACGGGGAAGACTTACCCGGCGTCGGAAGACCCTGGTTGCGTCAGCGTG GCCGAGATCTACGGCTACTACAAGAAGCACGGGTACGAGACCATCGTCAT GGGGGCCAGCTTCAGGAGCAAGGAGAGGTGCTCCAGCTGGCGGGCTGCGA CAGGCTCACCATTGCGCCCAAGTTCCTCGAGGTACCCCGGAAGCATCCGT CGCTCGTGCTGCCCTACTATATGTACACGCCAGACAGCCCTCTCCCACAA GTCTCAACAGTGCAGCAGAGTAGCGGGGCCAAAGCGTAGGTAGAGTGCTA CTCGCCTTTCCTTCACTTGAGGAGTACAGTCAGAAACAGCGTCGCACGAA GAACAAATCACGACGCCGTTTCCGCCTTGGCCCCTCTATCCCAGGAACTG CAAAACTGCACCGACGACGTGGTGAAGCAGCTTGACCCTGCTGCTTCCGC GGCAGCCTGCACCCTGGACAAGGTAAATAAATCTCCCTTCTCTTGAATAG TACCTATTAATAGTAGAAAAGATCATGTTGAAACGTAATCTGGTGTCAAT GGTGCAACGGTGCGCCTTCTGCGTCCGAGGAACTCGTAATTTTTTTACAT GATTCTCTGCGTTGGGTCGAGACGAGAAACTACAAAGGCCTGGGACCAGG TTTTGAGGGTGTACCGTATATATACCACACCCCCCACTAATAATAGTCTC AAACCCTGCGCTTGGTCCGTTGTCCCCGCCACGCGTTCAGCTCCCCAACA ACGAGTCAGCCTTCCGCTTGGCAATGAACGACGATGCCATGGCCACCTCA AGCTTGCCGAGGGGAATCCGTGGCTTCGCCGCAGATATCGTTAAGCTCGA GGTCACTGTCCGCGAGCGTCTGGGTGTGTCTGCTACCCCGTTAACGAACG GGGTCAGCCCCGTTACCAACGGGAGCGCGGCAGTGACGGAGTTCGACCAG CTGGCGGGCATGACGACGATCGTGGCGGACTCCGGAGAGATCGAGGCCAT CCGGAAGTACAAGCCGACGGACGCGACGACCAACCCGTCGCTCATCTACG CGGCCGCGCAGATGGAGGAGTACCAGAGCTTCGTCGAGGACGCGGTGAAG AAGGCGCTTGCGATGGGAGGTGGGTGGTGGAGTACTCATATTAAAGGGCA GACCACCAAGGTATATGAAGCTTGGATGTGCCGATGGCCACGAGCGCTCT CTTTGAAACCTTCCATGCCATATTGTCTCGTCACATGTTCTCCGTAAAGA TGACCAAACCACCTTGATTCGATACAACAGGGGCTTCGGAGAAGGAACGG GTGGAGGCCGCGATGGACCGGCTCTCGGTCAACTTCGGCCTCGAGATCCT TAAGATCGTGCCCGGGTATGTCTCCACCGAGGTGGACGCCAGGCTCAGCT ACGACACTGAAGCCACGGTTGCAAAGGGGAGGCGTATCGTGGAACTCTAC AAGGCTGCCGGTGAGTATGCGCTTACCATGTACTGGTGTGTTATCTTGGG AGGAACTATACCACGCCCCCGGGGATGGTTTAATGAGTGTCCCCATTCAA ATTGCGTGTGTATGGGGGGGGGGGGGCACCTACATCGATTGCAATAGCAA ACGCTGTGGACTTGAATGTATGGTTTTACACATGACTCGTAAATTTCCGT TGCTAAAATATTAAAGGGAAGGAGTTTTCAATCACATCCCCGGGTTTTAC AGAACATGCTATTAATAGCCGTCCGCTCTTTTCTACAAACAAATACAAGT GCTCGTTCACTTGACCGTTTCCTGCGGCTTGTCTTGATTGTTACCCCTCG TGTTCTGCTCACCGTAACAGGCGTGGACAAGTCTCGCGTCCTGATCAAGA TTGCGAGCACCTGGGAGGGTATCCGCGCGTGCGAGATCCTTCAGAAGGAG GGCATCTCGTGCAACATGACCCTGCTCTTCTCCTTGGCACAGGTACCGAA ACCTCATCTAATGGAAGTGGCCATTGAGCTCCGTCTGTGATGTGATCAAA ACATGGAATGCGCGTCTATTCACCCCTCCCTCCACCTTATCCAAGTCTCA GCGTCTCCACCCTTGTCCTTCGCAAACCTTGAACCTCTGCCTAACCGGAA GGCGGTGGCGTGCGCCGAGGCAGGAGCTACCCTGATCTCGCCCTTCGTCG GGCGCATCACGGACTGGTACAAGGCGGACACGGGGCGATCGGGGTACGAG CCGGAGGAAGACCCCGGCTGCCTCAGCGTGACCGAAATTTACGGTTACTA CAAGAAATTCGGGCACGAGACCATCGTCATGGGGGCCAGCTTCCGCAACA AGGAGCAGATTCTGCAGCTGGCGGGCTGCGACAGACTCACCATCGCGCCC AAGTTCCTCGAGGTGAGGAGAAGCGGCGTGCTTTTGCGGCGGTAGAGACG TGTCCCCGGGAATTCCCTGCACCCTACCACACCACAGTTGCGGTGGTCTT GCCGCGGAGAGTTTAAGCGGATGACATACGGTACTAATATATCTCAAAAA TACAAATATCTTGTCTAAACCCTTTTGAGAGTCTCCGCATTGCGCCAACC TGATTCGGTTCAACGTCGCCCAGGCGCTCAAGGCCGGGACGGAGCACGTG GAGAGAAAGCTCGACCCATACAGCGCTGCGAAGAGCTACAGCGGTGGCCG CTTCCCCGCGGATATCAAGTGAGCAGCGGGAGTGGTGCCGAGTCTACAGT AGCTGTAGCAGTAGTAGCTGTAGCCACAGCTGTGGGAAGCACATGAATGC TCGAGCACGGTGCTCCAAGGTAGAACAGACTCTGATGCGGCAAAAAACAA AACAAAAAAACAGCAGCTAGGAACTGTCGTATATATATATATATATATAT ATTATATTATAAAAATATATTGTGTTTGACATGAAGAGTAAACCATCAAA GCAGCGGCCTTGAACGATGCTGTCTTGCGTAGCCATCTGAACGAGGTTGG TCAGGATGTTCCACAATTCACGAAGCATTCCATTTACATCGACTGTTGTG TATGTGCAATCGTTGGCTGAACGCTAGGTCCTTCCGGCTGAAGCTGAACG AGAGCGCGATGGCGACAGAAAAGTTGGCCGAGGGTATCGCGTCATTCTCC CAGGCTATCGTCAAGGTGGAGAAGATTATCGCCGACAAGATTCGCACGGG ATCAGAGTAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig784:310432..318041+

>mRNA_F-serratus_M_contig784.19092.1 ID=mRNA_F-serratus_M_contig784.19092.1|Name=mRNA_F-serratus_M_contig784.19092.1|organism=Fucus serratus male|type=CDS|length=2274bp|location=Sequence derived from alignment at F-serratus_M_contig784:310432..318041+ (Fucus serratus male)
ATGAACGACGATGCCATGGCCACCTCAAGCTTGCCGAGGGGAATCCGTGG
CTTCGCCGCAGATATCGTTAAGCTCGAGGTCACTGTCCGCGAGCGTCTGG
GTGTGTCTGCTACCCCGTTAACGAACGGGGTCAGCCCCGTTACCAACGGG
AGCGCGGCAGTGACGGAGTTCGACCAGCTGGCGGGCATGACGACGATCGT
GGCGGACTCCGGAGAGATCGAGGCCATCCGGAAGTACAAGCCGACGGACG
CGACGACCAACCCGTCGCTCATCTACGCGGCCGCGCAGATGGAGGAGTAC
CAGAGCTTCGTCGAGGACGCGGTGAAGAAGGCGCTTGCGATGGGAGATGA
ACGACGATGCCATGGCCACCTCAAGCTTGCCGAGGGGAATCCGTGGCTTC
GCCGCAGATATCGTTAAGCTCGAGGTCACTGTCCGCGAGCGTCTGGGTGT
GTCTGCTACCCCGTTAACGAACGGGGTCAGCCCCGTTACCAACGGGAGCG
CGGCAGTGACGGAGTTCGACCAGCTGGCGGGCATGACGACGATCGTGGCG
GACTCCGGAGAGATCGAGGCCATCCGGAAGTACAAGCCGACGGACGCGAC
GACCAACCCGTCGCTCATCTACGCGGCCGCGCAGATGGAGGAGTACCAGA
GCTTCGTCGAGGACGCGGTGAAGAAGGCGCTTGCGATGGGAGGGGCTTCG
GAGAAGGAACGGGTGGAGGCCGCGATGGACCGGCTCTCGGTCAACTTCGG
CCTCGAGATCCTTAAGATCGTGCCCGGGTATGTCTCCACCGAGGTGGACG
CCAGGCTCAGCTACGACACTGAAGCCACGGTTGCAAAGGGGAGGCGTATC
GTGGAACTCTACAAGGCTGCCGGGGCTTCGGAGAAGGAACGGGTGGAGGC
CGCGATGGACCGGCTCTCGGTCAACTTCGGCCTCGAGATCCTTAAGATCG
TGCCCGGGTATGTCTCCACCGAGGTGGACGCCAGGCTCAGCTACGACACT
GAAGCCACGGTTGCAAAGGGGAGGCGTATCGTGGAACTCTACAAGGCTGC
CGGCGTGGACAAGTCTCGCGTCCTGATCAAGATTGCGAGCACCTGGGAGG
GTATCCGCGCGTGCGAGATCCTTCAGAAGGAGGGCATCTCGTGCAACATG
ACCCTGCTCTTCTCCTTGGCACAGGCGTGGACAAGTCTCGCGTCCTGATC
AAGATTGCGAGCACCTGGGAGGGTATCCGCGCGTGCGAGATCCTTCAGAA
GGAGGGCATCTCGTGCAACATGACCCTGCTCTTCTCCTTGGCACAGGCGG
TGGCGTGCGCCGAGGCAGGAGCTACCCTGATCTCGCCCTTCGTCGGGCGC
ATCACGGACTGGTACAAGGCGGACACGGGGCGATCGGGGTACGAGCCGGA
GGAAGACCCCGGCTGCCTCAGCGTGACCGAAATTTACGGTTACTACAAGA
AATTCGGGCACGAGACCATCGTCATGGGGGCCAGCTTCCGCAACAAGGAG
CAGATTCTGCAGCTGGCGGGCTGCGACAGACTCACCATCGCGCCCAAGTT
CCTCGAGGCGGTGGCGTGCGCCGAGGCAGGAGCTACCCTGATCTCGCCCT
TCGTCGGGCGCATCACGGACTGGTACAAGGCGGACACGGGGCGATCGGGG
TACGAGCCGGAGGAAGACCCCGGCTGCCTCAGCGTGACCGAAATTTACGG
TTACTACAAGAAATTCGGGCACGAGACCATCGTCATGGGGGCCAGCTTCC
GCAACAAGGAGCAGATTCTGCAGCTGGCGGGCTGCGACAGACTCACCATC
GCGCCCAAGTTCCTCGAGGCGCTCAAGGCCGGGACGGAGCACGTGGAGAG
AAAGCTCGACCCATACAGCGCTGCGAAGAGCTACAGCGGTGGCCGCTTCC
CCGCGGATATCAAGCGCTCAAGGCCGGGACGGAGCACGTGGAGAGAAAGC
TCGACCCATACAGCGCTGCGAAGAGCTACAGCGGTGGCCGCTTCCCCGCG
GATATCAAGTCCTTCCGGCTGAAGCTGAACGAGAGCGCGATGGCGACAGA
AAAGTTGGCCGAGGGTATCGCGTCATTCTCCCAGGCTATCGTCAAGGTGG
AGAAGATTATCGCCGACAAGATTCGCACGGGATCAGAGTAGGTCCTTCCG
GCTGAAGCTGAACGAGAGCGCGATGGCGACAGAAAAGTTGGCCGAGGGTA
TCGCGTCATTCTCCCAGGCTATCGTCAAGGTGGAGAAGATTATCGCCGAC
AAGATTCGCACGGGATCAGAGTAG
back to top