mRNA_F-serratus_M_contig78.19056.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: D7FT94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT94_ECTSI) HSP 1 Score: 386 bits (992), Expect = 8.520e-125 Identity = 198/320 (61.88%), Postives = 243/320 (75.94%), Query Frame = 3
Query: 240 GRKIVLIGAGVAVGVSAYLVTQKIRRNQLVRSAKAAAAAAEDAKSVYTRSTGVRNGFPP-RKAGAVSEESKQACEGCDCGLMEPGPIEGTMHAYERHVIICSGQEDWPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNR-VKVTACSEPSRGPVGTTDVIVYPEGLIYSLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNMSNPGVKAE 1193
G +V +GAG + AY + ++ S+ AA + + + S ++ V+ RKAG K+ C GCDCGLMEPGPIEGTMHAYERH+IICSG ++WPKV+E E+ SLAES+FN+CLGAGLI+TKKVA A GV PK R VK++ACSEPSRG GTTDVIVYPEGLIYSL D+ S+LE+F+ QL+NG+VA+ L+P PV Y+KMVLVCTHMSRDKRCGRAGPQV+ EM K L+ RGV D +A+RGSSHFGGH++AGVLIIYPQGDW+GLV+KKNA AI+DKCVLGTE +K NWRGNM++PG K E
Sbjct: 11 GASLVALGAGALLCARAYGSSSTATGSRSRGSSSAAGSEGDVSTSPGRKTAEVKETSEKMRKAGDGPAAPKEPCGGCDCGLMEPGPIEGTMHAYERHIIICSGHQNWPKVVEAEESSLAESLFNLCLGAGLIFTKKVALAAKKAGV--PKTRQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDTSSLEQFLNVQLINGEVATQLKPVPVSYKKMVLVCTHMSRDKRCGRAGPQVIGEMEKALQERGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNAPAIVDKCVLGTEGMKTNWRGNMADPGTKKE 328
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A2P6NW20_9EUKA (Altered inheritance of mitochondria protein 32 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NW20_9EUKA) HSP 1 Score: 150 bits (380), Expect = 1.640e-37 Identity = 92/258 (35.66%), Postives = 138/258 (53.49%), Query Frame = 3
Query: 435 SEESKQACEGCDCGLMEPGPIEGTMHA-YERHVIICSGQEDWPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRVKVTACSEPSRGPVGTTDVIVYPEGLIYSLRPDNLSA------------LERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNM 1169
SE + Q E C + GT+ Y+RH+I+CSGQ DW E+E + S+ KE + + + T CSEP+R G D+IVYPEG +YS + LS L FV ++ + ++ + V ++ +VLVCTH +RDKRCGR GPQV++++ L R +S+D VA+ GSSH GGH++A V+++YP+GDWYG +T KNA+ ++D + + P +RG M
Sbjct: 4 SESTPQEEESCAANQPYNPKLVGTVKKDYKRHLILCSGQMDWTGKPEKESGTFINSLT---------------KELKSRNLPDGEPGTLFTLCSEPNRSDKGV-DIIVYPEG-VYS-NEEVLSEKGVRYFQVTEADLPSFVD-HILKDEAPPNIHKEKVTWEHVVLVCTHGTRDKRCGRIGPQVVDQLTGMLSERNISSDKVAILGSSHLGGHKYAAVVVVYPEGDWYGQMTAKNASDLMDAYLQCKSLYPPGFRGKM 242
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: UPI0001FE36D4 (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE36D4) HSP 1 Score: 148 bits (373), Expect = 2.730e-35 Identity = 72/158 (45.57%), Postives = 111/158 (70.25%), Query Frame = 3
Query: 699 VTACSEPSRGPVGTTDVIVYPEGLIYSLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGT-EVVKPNWRGNM 1169
VTACSE ++G GT DVIVYPEG+ Y + + FV+ Q++ G VA ++ +PV + +VLVCTH +RD RCGR+GPQV++++ + + R + DT+A+RGSSH GGH++AGV+++YP GDWYG+++ +NA +ID + E++ N+RG +
Sbjct: 213 VTACSELTKGDFGT-DVIVYPEGIRYL--GVTIEQIPEFVEYQVVRGVVAQNIPHEPVDKRYLVLVCTHGTRDARCGRSGPQVMDKLAELMAERSIGDDTIAVRGSSHLGGHKYAGVVVVYPPGDWYGMLSGRNADKLIDAYLEHQPELISKNFRGRI 367
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: L8H8Q7_ACACA (Ferredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8Q7_ACACA) HSP 1 Score: 140 bits (354), Expect = 1.070e-33 Identity = 88/268 (32.84%), Postives = 139/268 (51.87%), Query Frame = 3
Query: 432 VSEESKQACEGCDCGL----------------MEPGPIEGTMHAYERHVIICSGQE--DWPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRV----KVTACSEPSRGPVGTTDVIVYPEGLIYSLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNM 1169
+ S A E C+CGL + + GT+ YE+H IICSG E +W I++++ S A+ +AK+A +TA K + K+T E S+G GT D+IV+PE + Y + V+ L+NG V+ ++ +P + +VLVC H +RD RCG GP ++ + L ARG+ D V +R SSH GGH++AGV+++YP+GDW+G +T++ ++D + +V +WRG M
Sbjct: 14 AATSSSAAAETCECGLTVAQGGCAPASSSSASLYNSQLLGTVKKYEKHFIICSGTEPDEWGAKIDKDEGSFAQ----------------LAKQA----ITARKAELTFKFKLTNSDERSKGSEGT-DLIVFPERIRYL--GVTAETMPFIVEDHLVNGHVSERVKHEPFESE-LVLVCCHNNRDTRCGAEGPIIVSAFDRLLAARGLGEDKVMVRSSSHLGGHKYAGVVVVYPRGDWFGFITEQQVEKLLDNYIEHGSMVPEHWRGRM 257
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A0M8KAU1_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8KAU1_9CHLR) HSP 1 Score: 125 bits (315), Expect = 5.680e-29 Identity = 78/227 (34.36%), Postives = 122/227 (53.74%), Query Frame = 3
Query: 501 GTMHAYERHVIICSGQEDWPKVIEEED---QSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRVKVTACSEPSRGPVGTTDVIVYPEGLIY-SLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNM 1169
G++ Y+RH I+C+G W +E+ Q+LA++ TK + +++VTA EPS G DV+V+P+G+ Y LR +++ L ++ L+ G+ + L +PV VLVC H RD+RCGRAGP +++ + L+ G+S D + SSH GGH+FAG +I+YP GDWYGLVT + I+ + + +V WRG +
Sbjct: 14 GSVKRYDRHFIVCTGVRHWAPKVEQGGGFLQALADA------------TKPLEPHLG--------QKIRVTASDEPSEG--DGYDVLVFPDGVRYLGLREEDIPTL---IEDHLLGGRPSPRLAHRPVEVG-YVLVCVHAERDERCGRAGPPLVDRFWEVLDREGLS-DRYRVVASSHLGGHKFAGNIIVYPSGDWYGLVTPADVERIVREHLREGRIVAALWRGRI 213
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A7S1TUK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUK0_9STRA) HSP 1 Score: 126 bits (316), Expect = 6.240e-28 Identity = 96/318 (30.19%), Postives = 141/318 (44.34%), Query Frame = 3
Query: 417 RKAGAVSEESKQACEGCDCGLMEPGPIEGTMHAYERHVIICSGQED---WPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANG-----------------------VTAPKNRVKVTACSEPSRGPVGTTDVIVY----PEGLIYSLRPDNLSALERFVKCQLM-----NGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADT----------------------------------VALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRG 1163
R+ + E C+GCD I GT AY HV++ +G W + IE+ + S A+ + G+I KK + A A VKVTA +E + G +V++Y P G+ +R + +A + + C+ + G + QP+P+P+ K++LVCTH SRDKRCGRAGPQ+L M + L RG+ A V LRG SH GGH+ AGV I+YP+ DWYG ++K NAA ++ + +L E + P RG
Sbjct: 34 RQDAELRAEVDGGCDGCDAADECASDILGTATAYHCHVLVATGVASDGLWNEKIEKVEGSFAQVLVGALKDLGMIAEKKKKDQEKAXXXXXXXXXXXXXXXXXXXXXLSPDAPAVPFAVKVTAVAEDA---TGGRNVLLYTNRYPRGV--RIRVEQTAAGAQGL-CEALLRSRDEGDALAPFQPEPLPWDKLILVCTHASRDKRCGRAGPQMLTHMSEALVKRGLGAGLPPDHPRHTHDPRGFLGAVASEISHRLAYGAPRPRVVLRGCSHIGGHKHAGVCIVYPEADWYGRISKANAAKLLAR-ILSEEKLLPQLRG 344
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A2E0UXF4_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0UXF4_9CHLR) HSP 1 Score: 122 bits (307), Expect = 9.110e-28 Identity = 77/229 (33.62%), Postives = 123/229 (53.71%), Query Frame = 3
Query: 495 IEGTMHAYERHVIICSGQEDWPKVIEEED---QSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRVKVTACSEPSRGPVGTTDVIVYPEGL-IYSLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNM 1169
+ GT+ Y RH+I+CSG +WP I++E ++L+ SI N +T N +K+TAC P+ G T ++V+P+ + I L DNL L +++ + G L+ + P + ++LVC H +RD RCG A P V+++M +E ++ + R SSH GGH+FAGV ++YP G+WYG +T+++AA +I L + WRG M
Sbjct: 17 LPGTVKYYNRHIIVCSGHSEWPAKIQDEGGFIKALSSSI---------------------NKIT-ELNAIKLTACDLPAVGDGET--ILVFPDRVRISGLTEDNLENLINYLRDGIERG-----LKIESFP-KFLILVCGHQNRDNRCGLAAPGVMQKMMNVIEQFDLTEQVLVSR-SSHLGGHKFAGVAVVYPSGNWYGRLTEQDAANVIKAECLDRQPYPALWRGRM 214
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A835YVK0_9STRA (Sucrase/ferredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVK0_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.050e-25 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 3
Query: 687 NRVKVTACSEPSR--GPVGTTDVIVYPEGLIYSLRPDNLSALERFVKCQLMNGQVAS-DLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQV---------LEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCV 1127
+RV++TAC+ P+ P GT D+++YPE L+ + + + LE+ + +A + PVPY+ +VLVCTH SR +RCGR GPQV +E M + +S +++ SH GGH+ AGV I++PQG WYG +TK+NAA I+D CV
Sbjct: 40 SRVRITACALPTGPLAPAGTVDMMLYPEALLCTRSTEQRATLEQSREAAAAAAALARVGIPTMPVPYEHLVLVCTHNSRSRRCGRTGPQVQPLQINMKVIEAMQERKAQLRMSDTQLSIVACSHIGGHKHAGVCIVWPQGHWYGRLTKENAADIVDTCV 198
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A8H7BX22_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BX22_9FUNG) HSP 1 Score: 117 bits (292), Expect = 2.430e-25 Identity = 77/239 (32.22%), Postives = 116/239 (48.54%), Query Frame = 3
Query: 492 PIEGTMHAYERHVIICSGQEDWPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRVKVTACSEPSRGPVGTTDVIVYPEGLIYS-LRPDNLSALERFVKCQLMN----GQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEAR--GVSADTVALRGSSHFGGHRFAGVLIIYP----QGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNMSN 1175
P+ G++ +Y RH++I +GQ DWPK IE+++ ++A +I EA N T KN + T+ G D+IV P+ +I S + P N R Q G+V D+ PY ++L+C+H RDKRCG P + E L + G A+ SH GGH+FAG +I Y +G WYG V + A I+++ VL V+K +RG+M +
Sbjct: 53 PLLGSVKSYRRHILISTGQADWPKKIEKDEGTVAAAIC----------------EAEVNSPTKWKNLITNTSMVSTYSTVEGGHDIIVLPDNIIVSNVTPRNAHQFYRLFVAQSNQQETYGEVEEDMCVHKNPYDSLLLICSHKRRDKRCGITAPLLAREFDHVLREKEIGEGEGGTAVLMVSHIGGHKFAGNVICYTHQGKRGIWYGRVNPCHCAPIVEETVLKGNVIKELYRGSMEH 275
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Match: A0A7W1C6G9_9BACT (Sucrase ferredoxin n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1C6G9_9BACT) HSP 1 Score: 111 bits (277), Expect = 4.270e-24 Identity = 73/226 (32.30%), Postives = 115/226 (50.88%), Query Frame = 3
Query: 492 PIEGTMHAYERHVIICSGQEDWPKVIEEEDQSLAESIFNMCLGAGLIWTKKVAKEAAANGVTAPKNRVKVTACSEPSRGPVGTTDVIVYPEGLIYSLRPDNLSALERFVKCQLMNGQVASDLQPKPVPYQKMVLVCTHMSRDKRCGRAGPQVLEEMGKELEARGVSADTVALRGSSHFGGHRFAGVLIIYPQGDWYGLVTKKNAAAIIDKCVLGTEVVKPNWRGNM 1169
P+ GT+ Y RHV++C+G WP IEE + L ++ + +E +A T PK +TA E S GP D++V+PE + Y + + + ++ G+V++ P+ V VC H +RD+RCGR GP V+ + + A G++ TV R +SH GGH++AG ++IYP G WYG V +A I+ + +V+ RG M
Sbjct: 9 PLSGTVKPYGRHVLVCTGARSWPARIEEAEGLLGRMARDV----------RALRETSA---TPPK----LTASDESSMGP--GADLLVFPESVRYHGVDE--ATWPGVLADHVIGGEVSTAAPSTPLTGVH-VFVCVHAARDERCGRCGPPVIAALREACAAEGMADATV--RATSHVGGHKYAGNVLIYPSGAWYGYVRPADARRIVRDHIREGRIVEELCRGRM 210 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig78.19056.1 >prot_F-serratus_M_contig78.19056.1 ID=prot_F-serratus_M_contig78.19056.1|Name=mRNA_F-serratus_M_contig78.19056.1|organism=Fucus serratus male|type=polypeptide|length=376bp MMNLRTLLPSVISRYTVGRKIVLIGAGVAVGVSAYLVTQKIRRNQLVRSAback to top mRNA from alignment at F-serratus_M_contig78:861195..871543- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig78.19056.1 ID=mRNA_F-serratus_M_contig78.19056.1|Name=mRNA_F-serratus_M_contig78.19056.1|organism=Fucus serratus male|type=mRNA|length=10349bp|location=Sequence derived from alignment at F-serratus_M_contig78:861195..871543- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig78:861195..871543- >mRNA_F-serratus_M_contig78.19056.1 ID=mRNA_F-serratus_M_contig78.19056.1|Name=mRNA_F-serratus_M_contig78.19056.1|organism=Fucus serratus male|type=CDS|length=2256bp|location=Sequence derived from alignment at F-serratus_M_contig78:861195..871543- (Fucus serratus male)back to top |