mRNA_F-serratus_M_contig775.19009.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI) HSP 1 Score: 229 bits (585), Expect = 6.530e-74 Identity = 109/183 (59.56%), Postives = 134/183 (73.22%), Query Frame = 1
Query: 1 DRSNATTTRHLCCPRCRRLLIVPRAETFRCQCSMIF-RVTGSSDNQLHLCFSLRDQEANGQGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKV-KEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHLDICEALTGTSGVAFLSTVGGNPTPVIERSR 543
D+ T+HL CPRCRRLLIVP +TFRC CS++F +V + + LCFSL +QE +GQG GLPRELVER+P VT++M + + GE+ K E +D D+M CRICL DY+ GD VR+LPCFHRFHV EIDDWLNRN CPLCHLDI +ALTG+SGVAF+S + GNP PVIER+R
Sbjct: 15 DQDRVVNTKHLSCPRCRRLLIVPNVDTFRCHCSLVFSKVRDAVGGTMQLCFSLSEQELHGQGCGLPRELVERLPVTVVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERTR 197
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.930e-17 Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 1
Query: 10 NATTTRHLCCPRCRRLLIVPRAET---FRCQCSMIFRVTGSSDNQLHLCFS----LRDQEANGQGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHLDICEALTGTSGVAFLST 504
N+T+ + + C C R+ ++P T F C C V ++ QL + L E G +ELV +P ++ + AA+A E E D D ++CR+CL +Y+DG+ +RVLPCFH+FH ID+WL R+ CPLC+ + +AL G +T
Sbjct: 39 NSTSVQVVMCTNCGRVGMLPHQSTTAVFLCPCGT--PVLAATPGQLLTLITRGGGLGALEGVHHHQGASKELVALLPTVT------HRGDCKAAATAQEAFGE---DDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQHGGADLGAT 199
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A4D9D6F5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.590e-13 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 259 SAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLC 447
+A+ + +K+ D+++CRICL DY +GD +RVLPCFHRFH + DWL R +CPLC
Sbjct: 108 AAEVPGSTPPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRKKTCPLC 170
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: W7U3U3_9STRA (Ring u-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3U3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-12 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 259 SAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLC 447
+A+ + +K+ D+++CRICL DY +GD +RVLPCFHRFH + DWL R +CPLC
Sbjct: 260 AAEVPGSTPPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRRKTCPLC 322
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A813F595_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F595_POLGL) HSP 1 Score: 69.7 bits (169), Expect = 1.640e-12 Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 265 KAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHLDICE 465
+A S GE + D D+ C +CL ++ GDS+R+LPC HR+H D + WL+ N CP+C DI +
Sbjct: 21 EAQSTGEDDSRGAADDDSRKCMVCLEQFQAGDSLRILPCLHRYHRDCVVRWLSENRRCPICKHDITQ 87
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.910e-12 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 178 QGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHLDI 459
Q G +LVER+P T Q + A GE+ D ++CR+CL DY+ GD++R+LPC H+FH ID+WL R+ CPLC+ +
Sbjct: 889 QHTGASPQLVERLP----TMQYQESSRKVLVAEHGEE--------DKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSV 970
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A2L2Y4S9_PARTP (RING finger protein 38 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y4S9_PARTP) HSP 1 Score: 68.6 bits (166), Expect = 7.220e-12 Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 316 NMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHL 453
N C++CL DY++GD++R+LPCFH FH ID WL N +CP+C +
Sbjct: 54 NKECQVCLSDYENGDTLRILPCFHEFHTPCIDPWLKINHTCPVCRV 99
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A812TRC9_9DINO (ZNRF3 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TRC9_9DINO) HSP 1 Score: 70.9 bits (172), Expect = 1.040e-11 Identity = 30/70 (42.86%), Postives = 37/70 (52.86%), Query Frame = 1
Query: 325 CRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLNRNSSCPLCHLDICEALTGTSGVAFLSTVGGNPTPVIE 534
C +CL D++DGD VRVL CFH FH D +D WL RN CP+C D+ TG + PV
Sbjct: 79 CAVCLEDFRDGDLVRVLRCFHTFHRDCVDTWLARNHLCPICKQDVAGQPTGKERKYIACCLASEVQPVTS 148
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A8H7V3W4_9FUNG (RING-type domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V3W4_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 1.250e-11 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 292 KEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLN-RNSSCPLCHLDIC 462
+E+ +DT++ C ICL DYK+G+S+R LPC H FH ID WL R CP+C DIC
Sbjct: 212 REKIVDTEHTECAICLEDYKEGESIRTLPCKHEFHKGCIDIWLTTRKKFCPICKFDIC 269
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Match: A0A1Y2J352_PYCCO (RING-type domain-containing protein n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2J352_PYCCO) HSP 1 Score: 72.0 bits (175), Expect = 1.780e-11 Identity = 39/104 (37.50%), Postives = 51/104 (49.04%), Query Frame = 1
Query: 250 GWESAK--------AASAGEKVKEESLDTDN----------------MACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWL-NRNSSCPLCHLDICEALTGTSG 486
GWE K A++A + E LDT N M C ICL + GD VRVLPC+H FH+DEID+WL N+ CP+C D+ + +G
Sbjct: 281 GWEKHKPSCASAEGASAAASQDLERGLDTPNASTSHDVALPAWVEQQMECAICLEMFGKGDRVRVLPCYHLFHIDEIDEWLINKKKLCPICKADVTQPQRSPAG 384 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig775.19009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig775.19009.1 >prot_F-serratus_M_contig775.19009.1 ID=prot_F-serratus_M_contig775.19009.1|Name=mRNA_F-serratus_M_contig775.19009.1|organism=Fucus serratus male|type=polypeptide|length=184bp DRSNATTTRHLCCPRCRRLLIVPRAETFRCQCSMIFRVTGSSDNQLHLCFback to top mRNA from alignment at F-serratus_M_contig775:363471..370135+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig775.19009.1 ID=mRNA_F-serratus_M_contig775.19009.1|Name=mRNA_F-serratus_M_contig775.19009.1|organism=Fucus serratus male|type=mRNA|length=6665bp|location=Sequence derived from alignment at F-serratus_M_contig775:363471..370135+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig775:363471..370135+ >mRNA_F-serratus_M_contig775.19009.1 ID=mRNA_F-serratus_M_contig775.19009.1|Name=mRNA_F-serratus_M_contig775.19009.1|organism=Fucus serratus male|type=CDS|length=1104bp|location=Sequence derived from alignment at F-serratus_M_contig775:363471..370135+ (Fucus serratus male)back to top |