mRNA_F-serratus_M_contig774.18999.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE) HSP 1 Score: 274 bits (700), Expect = 6.160e-73 Identity = 166/351 (47.29%), Postives = 222/351 (63.25%), Query Frame = 1
Query: 1 GEWVGCKQGPQERRKTFARLREYIESLDTLRDHLARHDLWVLAELWKTCEAEERKTSQQSCGRPLSSRIYQSKLDLHRRVAGV---------HTAKKPAYEATRSLAHALEMVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEP-LKLSVARTTAKLGMLLVKHGSIKKALSCSRKSLVFM----GTEGMADPNSSARGGDSKTHTHHVVVASLYSVAEALTRSTNVEEAQGLYEATATILRNMYGNDASLCMEARGKEKLASMMVASGRADQAIA---LNEQSLLDVTKAFGEVHPVMARVMHQRGVLLQSQAKLGGARECFRKALQIREAFFGSGHAL 1002
G WVGCK Q R F RL ++++S DTLRDHLA+ DLW L +LW+ CE E +KTS S +S RIY+S+LDL R+ A + T + A EAT LA AL+MVAD+QA+ C A LYRES+ + ++SL +QGA +G LE +K ++ R T KLG LL+K G AL+ +SL + GT P S+ G S H VV SL S+AEAL + +V+EA+G+YE A ILR +YG+D SLC+E RG E+LASMM+ +GRAD+A LN++ L TKAFG+VHPV+ARV+ Q+G +L ++ L GA F +A +IREAF+G GHAL
Sbjct: 349 GAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHS---HVSCRIYESRLDLLRQEADIVAGPASRHHSTTARVASEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVRIQGAGSGPLESRIKRALERITGKLGALLLKQGKHMDALNPCAESLTLIRARQGTN--LGPEGSSNLGRSHLP-HQDVVDSLCSMAEALMKGNSVDEAEGMYEEAAIILRRLYGDDESLCLETRGIEQLASMMLEAGRADKAGGKSHLNDRCLSKATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARKIREAFYGKGHAL 693
BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Match: D7G1G8_ECTSI (Kinesin light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G8_ECTSI) HSP 1 Score: 210 bits (534), Expect = 2.990e-54 Identity = 137/345 (39.71%), Postives = 184/345 (53.33%), Query Frame = 1
Query: 1 GEWVGCKQGPQERRKTFARLREYIESLDTLRDHLARHDLWVLAELWKTCEAEERKTSQQSCGRPLSSRIYQSKLDLHRRVAGV---------HTAKKPAYEATRSLAHALEMVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEP-LKLSVARTTAKLGMLLVKHGSIKKALSCSRKSLVFMGTEGMADPNSSARGGDSKTHT-HHVVVASLYSVAEALTRSTNVEEAQGLYEATATILRNMYGNDASLCMEARGKEKLASMMVASGRADQAIALNEQSLLDVTKAFGEVHPVMARVMHQRGVLLQSQAKLGGARECFRKALQIREAFFGSGHAL 1002
G WVGCK Q R F RL ++++S DTLRDHLA+ DLW L +LW+ CE E +KTS S +S RIY+S+LDL R+ A + + K A EAT LA AL+MVAD+QA+ C A LYRES+ + ++SL +QG +G LE +K ++ R T KLG LL+K G + AL +SL + D ++H H VV SL S+AEAL R +V+EA+ LNE+ L + TKAFG+VHPV+ARV+ Q+G +L ++ L GA F +A QIREAF+G GHAL
Sbjct: 276 GAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHS---HVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGTGSGALESRIKRALERITGKLGALLLKQGKHRDALHPCAESLTLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAE--------------------------------------------ELNERCLSEATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARQIREAFYGKGHAL 573 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig774.18999.1 >prot_F-serratus_M_contig774.18999.1 ID=prot_F-serratus_M_contig774.18999.1|Name=mRNA_F-serratus_M_contig774.18999.1|organism=Fucus serratus male|type=polypeptide|length=424bp MVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEPLKLSVAback to top mRNA from alignment at F-serratus_M_contig774:299141..311220+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig774.18999.1 ID=mRNA_F-serratus_M_contig774.18999.1|Name=mRNA_F-serratus_M_contig774.18999.1|organism=Fucus serratus male|type=mRNA|length=12080bp|location=Sequence derived from alignment at F-serratus_M_contig774:299141..311220+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig774:299141..311220+ >mRNA_F-serratus_M_contig774.18999.1 ID=mRNA_F-serratus_M_contig774.18999.1|Name=mRNA_F-serratus_M_contig774.18999.1|organism=Fucus serratus male|type=CDS|length=2544bp|location=Sequence derived from alignment at F-serratus_M_contig774:299141..311220+ (Fucus serratus male)back to top |