mRNA_F-serratus_M_contig7723.18984.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7723.18984.1
Unique NamemRNA_F-serratus_M_contig7723.18984.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 269 bits (687), Expect = 2.510e-79
Identity = 128/229 (55.90%), Postives = 168/229 (73.36%), Query Frame = 1
Query:    1 MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            +E  F   TV A I++ NPQ + GPSGLR+S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG  LA++F+P GQYGVAV GG E++A  A L  ++G  +L+YD  NAF S+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCN+GPLCYSAG LK+L++FRANPPV G
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVG 1381          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 4.870e-69
Identity = 121/227 (53.30%), Postives = 149/227 (65.64%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 346          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 5.090e-66
Identity = 120/227 (52.86%), Postives = 148/227 (65.20%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 346          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 2.950e-65
Identity = 121/227 (53.30%), Postives = 149/227 (65.64%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 346          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 6.380e-65
Identity = 121/227 (53.30%), Postives = 149/227 (65.64%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 346          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 5.640e-54
Identity = 100/194 (51.55%), Postives = 124/194 (63.92%), Query Frame = 1
Query:  109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 194          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 6.850e-51
Identity = 99/194 (51.03%), Postives = 124/194 (63.92%), Query Frame = 1
Query:  109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRANPPVPG 687
            + D   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VLRR+I   F R+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ S+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCN+G   +  G L I+KEF   PPVPG
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPG 194          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.290e-42
Identity = 83/166 (50.00%), Postives = 106/166 (63.86%), Query Frame = 1
Query:  109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQ 603
            + D+  E LA F+  VF     LP +FW   TSA+LSALG+K RP+A G VLRR+I   FCR+Y + +AD F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+ SI R   L A+A   P +V Y  NLYAR   KLLF ++ G  E+V S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A836CHA2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.710e-29
Identity = 86/228 (37.72%), Postives = 116/228 (50.88%), Query Frame = 1
Query:   25 TVKAVIKKANPQSAAGPSGLRYSHLQAALC-----DELVEDLAAFATLVFSSRV-LPQVFWTLHTSANLSALGQ-------KARPVACGDVLRR--VIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEF 663
            TV   I++A+P   AGPSGLRYSHLQ AL       ++   L  +  LV      +P  FW LH +A L+ L +       K RP+ACG+VL+R  V  +V+       LA+  QP GQYGVAVS G E  AL   L +E G    + D  NAF ++        +A  +P ++ Y    Y R  P+LLF    G    + S RGV+QG  +GP+ +  G    LK F
Sbjct: 2480 TVAKCIQRASPYRRAGPSGLRYSHLQDALRTTWGKQQMSLTLVRWIELVMRDAARIPDDFWQLHAAARLTPLTERQADGTPKLRPIACGEVLQRLPVCTSVYVGERKGFLAELLQPDGQYGVAVSAGAEKAALAGKLAYELGHWQFNVDLRNAFNALKVTAAAKWVAAQLPDLLNYFLATYMRNRPQLLFQHADGSVRTIASQRGVKQGGPLGPVLFCGGIADCLKRF 2707          
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.780e-29
Identity = 75/228 (32.89%), Postives = 118/228 (51.75%), Query Frame = 1
Query:    4 ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFAT------LVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNVGPLCYSAGSLKILKEFRA 669
            E  F+   +  VI + +  S AG  G R+SHL++ + +++  +  + A       L+      P  FWTL   ++L ALG+K RPV  G   RR+I A   R +  KL + F+   Q+GVAV+GGVE +A+ A L  + G  ++  D +NAF +  R   +   A+ VP +V Y +  Y   P K ++ +D G    +E   GVQQG  +GP  +    + I+ + RA
Sbjct:   87 ETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7723.18984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.510e-7955.90Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE4.870e-6953.30Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE5.090e-6652.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE2.950e-6553.30Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE6.380e-6553.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE5.640e-5451.55Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE6.850e-5151.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE1.290e-4250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CHA2_9STRA3.710e-2937.72Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE4.780e-2932.89Reverse transcriptase domain-containing protein (F... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7723contigF-serratus_M_contig7723:10388..11074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score88.6
Seed ortholog evalue4.2e-15
Seed eggNOG ortholog400682.PAC_15702057
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size689
Cds size687
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932309.054511-CDS-F-serratus_M_contig7723:10387..110741622932309.054511-CDS-F-serratus_M_contig7723:10387..11074Fucus serratus maleCDSF-serratus_M_contig7723 10388..11074 +
1690964245.8230283-CDS-F-serratus_M_contig7723:10387..110741690964245.8230283-CDS-F-serratus_M_contig7723:10387..11074Fucus serratus maleCDSF-serratus_M_contig7723 10388..11074 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7723.18984.1prot_F-serratus_M_contig7723.18984.1Fucus serratus malepolypeptideF-serratus_M_contig7723 10388..11074 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7723.18984.1

>prot_F-serratus_M_contig7723.18984.1 ID=prot_F-serratus_M_contig7723.18984.1|Name=mRNA_F-serratus_M_contig7723.18984.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFAT
LVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYG
RKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFKSI
YRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQ
QGCNVGPLCYSAGSLKILKEFRANPPVPG
back to top

mRNA from alignment at F-serratus_M_contig7723:10388..11074+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7723.18984.1 ID=mRNA_F-serratus_M_contig7723.18984.1|Name=mRNA_F-serratus_M_contig7723.18984.1|organism=Fucus serratus male|type=mRNA|length=687bp|location=Sequence derived from alignment at F-serratus_M_contig7723:10388..11074+ (Fucus serratus male)
ATGGAGAACCTCTTCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGC CAACCCACAAAGCGCGGCAGGTCCGTCTGGATTACGCTACAGTCATCTGC AGGCTGCGCTGTGCGATGAACTGGTTGAGGATCTCGCGGCGTTCGCGACG CTTGTTTTTTCCAGCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACAC GAGCGCTAACCTTTCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCG GCGATGTATTGCGGAGAGTAATTGGCGCTGTTTTCTGCCGCCGATACGGC AGGAAGCTGGCAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGT TTCAGGCGGAGTAGAGATAATGGCGCTCACTGCAACACTGGGTTTCGAAG AGGGTTGTACCATTCTCTCATACGACGGAGCAAACGCCTTCAAGAGTATA TACCGCCACAGGTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGTGGT CCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTG CACTAGACGGCGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAG CAAGGATGCAATGTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGAT CCTAAAAGAATTCAGGGCCAACCCACCGGTGCCAGGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7723:10388..11074+

>mRNA_F-serratus_M_contig7723.18984.1 ID=mRNA_F-serratus_M_contig7723.18984.1|Name=mRNA_F-serratus_M_contig7723.18984.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig7723:10388..11074+ (Fucus serratus male)
ATGGAGAACCTCTTCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGC
CAACCCACAAAGCGCGGCAGGTCCGTCTGGATTACGCTACAGTCATCTGC
AGGCTGCGCTGTGCGATGAACTGGTTGAGGATCTCGCGGCGTTCGCGACG
CTTGTTTTTTCCAGCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACAC
GAGCGCTAACCTTTCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCG
GCGATGTATTGCGGAGAGTAATTGGCGCTGTTTTCTGCCGCCGATACGGC
AGGAAGCTGGCAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGT
TTCAGGCGGAGTAGAGATAATGGCGCTCACTGCAACACTGGGTTTCGAAG
AGGGTTGTACCATTCTCTCATACGACGGAGCAAACGCCTTCAAGAGTATA
TACCGCCACAGGTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGTGGT
CCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTG
CACTAGACGGCGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAG
CAAGGATGCAATGTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGAT
CCTAAAAGAATTCAGGGCCAACCCACCGGTGCCAGGAATGGAGAACCTCT
TCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGCCAACCCACAAAGC
GCGGCAGGTCCGTCTGGATTACGCTACAGTCATCTGCAGGCTGCGCTGTG
CGATGAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCTTGTTTTTTCCA
GCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACACGAGCGCTAACCTT
TCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGCGATGTATTGCG
GAGAGTAATTGGCGCTGTTTTCTGCCGCCGATACGGCAGGAAGCTGGCAG
ACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTTCAGGCGGAGTA
GAGATAATGGCGCTCACTGCAACACTGGGTTTCGAAGAGGGTTGTACCAT
TCTCTCATACGACGGAGCAAACGCCTTCAAGAGTATATACCGCCACAGGT
TCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGTGGTCCCCTACGCATCA
AACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCACTAGACGGCGG
AGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGCAATG
TAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAATTC
AGGGCCAACCCACCGGTGCCAGGA
back to top