mRNA_F-serratus_M_contig772.18970.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig772.18970.1
Unique NamemRNA_F-serratus_M_contig772.18970.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: D8LT32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT32_ECTSI)

HSP 1 Score: 685 bits (1768), Expect = 1.100e-240
Identity = 324/495 (65.45%), Postives = 392/495 (79.19%), Query Frame = 3
Query:  435 MDAAEAELTATLKGGEYVEEHFYPDRQYTDRDTYTYAFPDSSDYTIGIIIDPCKGNSYDCCHRFFGSPEYPMVIDPDTSSYRAVDKFLFADPTEIISNTTVVDKEGVEVSEDYSRLADDEIVIDDSCTAAGVPGGQSCVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCPIYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNWKRFYTREAATVLYNNATSSYSSGDLDGKYHSTCEYFLQCALATGSFCSGDDREYTFKGQVGKITFVPDDPDIDQFGVTFNDGRTSYSFSQEHLQVEQDYNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVI 1919
            M+ AEA+LTA+LKGGEYVE+ F+P+RQY D D + Y +PDSSDYTIGII+DPCKGNSYDCC RF+G+PEYPM+ID D SSYR VDK+LFAD TEI++NT +VDKEGV V   YSR ADDEIVI+D+CTAAGVP G SCVGFR+K +RSTS+ARCTDNNQTVD  +SC +L GE SEHCLAVGYSQTAISV+CGG +A+D+HCGTFLE+H+GY N Y   E++LS+V LLT NV+GYTTTTIPTTWM+D+++++CA+EH SLL GTMVLI+E APVCCCPR FS KDQLGSL CP++ S+EGP+AA+L +VA+ + FEE+ QTYPFCP+L+++EDL++VSEY ++W                                                  +REYTFKGQVGKIT VPDDP+ +Q+ VTFN+GRTSY F+QEHLQVEQDYNYEIWWVQRTL+NFRVQARKP+TVTSPTCTFDS+NG YYPYA+LDDDG  I
Sbjct:    1 MEKAEADLTASLKGGEYVEDVFFPERQYADTDIFVYEYPDSSDYTIGIIVDPCKGNSYDCCDRFYGAPEYPMLIDLDQSSYRVVDKYLFADTTEILANTVIVDKEGVTVPTAYSRFADDEIVIEDNCTAAGVPDGLSCVGFRQKQQRSTSVARCTDNNQTVDAGSSCQNLAGEVSEHCLAVGYSQTAISVICGGDFAEDDHCGTFLELHVGYANYYADPEDVLSEVRLLTANVTGYTTTTIPTTWMNDTSKILCAFEHVSLLEGTMVLIAEEAPVCCCPRAFSQKDQLGSLFCPVHNSVEGPFAATLTSVADLLTFEEESQTYPFCPSLDENEDLMVVSEYSTSW--------------------------------------------------EREYTFKGQVGKITLVPDDPEDEQYEVTFNNGRTSYGFNQEHLQVEQDYNYEIWWVQRTLHNFRVQARKPITVTSPTCTFDSTNGQYYPYAILDDDGVAI 445          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A835YPT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT0_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.230e-113
Identity = 200/504 (39.68%), Postives = 274/504 (54.37%), Query Frame = 3
Query:  435 MDAAEAELTATLKGGEYVEEHFYPDRQYTDRDTYTYAFPDSSDYTIGIIIDPCKGNSYDCCHRFFGSPEYPMVIDPD-TSSYRAVDKFLFADPTEIISNTTVVDKEGVEVSEDYSRLADDEIVIDDSCTAAGVPGGQSCVGFRKKMKRSTSIARCTDNNQTVD---------GAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCPIYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNWKRFYTREAATVLYNNATSSYSSGDLDGKYHSTCEYFLQCALATGSFCSGDDREYTFKGQVGKITFVP--DDPDIDQFGVTFNDGRTSYSFSQEHLQVEQDYNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDG 1910
            M   EA L A L+ G+YVE   +PDR Y + D YT+ +P +SDY IGI++DPCKGN+++CC R +G+PEY M+   D  ++ RAV K + A PT+I+ + T++D++G E+    S L DDE  +DD+CTAA  P           +  S + AR T                G ASC D  G  S  C+AV  +QTA+SV CGG++A D  CGTFLE+H+   N Y   +  L++  +   N +GY TT + TTW  +++RV+CAYE      G  VLI  +AP CC PR +S   + G+  CP  G  +G +A    +VAE+ A EE    YP+CP   DD D++M                A +L        +  D  G                   C G D E++F+G+VG +   P   D     + VTFN GRT Y+F  +H+ +E DYNYE+WWVQRT     VQ RKP TVT+P CTFD+ N  Y+PYA LD DG
Sbjct:    1 MAEEEALLRAELESGDYVETTLHPDRSYFNPDVYTFDYPRASDYAIGILVDPCKGNAHNCCMRSYGAPEYRMLRAADGNATARAVAKLVHAAPTDILRDVTLIDEDGQEIDPAASCLPDDETAVDDACTAADAPDAARPHAL---LCTSATAARATKLXXXXXXXXXXLRPAGTASCTDGYGNTSPRCVAVAIAQTAMSVACGGAFARDPRCGTFLEVHVPAPNDYARVDAALAEARVPAANATGYVTTAVATTWRGNASRVLCAYELADAFPGASVLIGAAAPRCCAPRAYSQLTRTGAFFCPDAGKAQGAFAPRPASVAERAAAEEAAAAYPYCPRRADDVDVLM---------------GAGLL--------ADDDARG-------------------CGGGDAEFSFRGRVGTVVEAPTASDDGSGVYRVTFNGGRTDYAFEPQHVALELDYNYELWWVQRTRSALVVQKRKPFTVTAPRCTFDAVNNQYFPYAELDADG 459          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A7S2FKQ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKQ0_9STRA)

HSP 1 Score: 355 bits (912), Expect = 8.150e-109
Identity = 216/569 (37.96%), Postives = 307/569 (53.95%), Query Frame = 3
Query:  477 GEYVEEHFYPDRQYTDRDTYTYAFPDSSDYTIGIIIDPCKGNSYDCCHRFFGSPEYPMVIDPDTSSY------RAVDKFLFADPTEIISN-TTVVDKEGVEVSEDYSRLADDEIVIDDSCTAAGVPGGQSCVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDS--------TRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCP--------IYGSLEGPYAAS-LKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSE---------------------------------YESNWK----RFYTREAATVLYNNATSS----YSSGDLDGKYHSTCEYFLQCAL-ATGSFCS----GD--DREYTFKGQVGKITFVPDDPDIDQF----GVTFNDGRTSYSFSQEHLQVE-QDYNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVI--M*STEESPT 1946
            G  +E  F P   + D D Y+   P S DY +G+++DPC+  SYDCC   +G+ EY   +  DTS+       R V K   A    I+ N  +V+  +   V  + SR ADD  ++DD C     P    C G+R + +       CTDNNQTV   ++C D+NG+ S+HC+ +GYSQTA++V+CGG ++D+EHCGTF E+HM   +PY     ++++V L   N SG+ TTT+P  +  D         TRV+C YE   L  G+MV +  SAP CCCP+++S KD  G   CP        + G   GP+A S L T+AE++  +  + TYP+CP  E+ ED++M S+                                 Y  N K    RFYT     +   N + +    Y+S  L G Y  TC YF  CA  A G  C+    GD  D E+TF G VGK+T+VP DP  D+F     V+FNDGRT Y F++  L +E +D+NYE+WWV+RT YN+ V+ +KP  V +P CTFD  N  Y P+A++D++G  +  + S+E SPT
Sbjct:  108 GVLLEAEFKP---FADIDQYSVEEPRSEDYQVGLLLDPCQQLSYDCCVNTYGTAEYG-ALPADTSTETLYNTKRRVPKRPLAGSDGILENFDSVIKYDHTVVELEASRRADDAKLVDDECIGVEDPYPY-CQGYRLRNQMFPIFPNCTDNNQTVYANSTCQDVNGKYSDHCVQLGYSQTALAVMCGGEFSDNEHCGTFFEVHMPNGSPYNDETYVINEVRLEQTNASGFNTTTLPLFYGVDGNVPDSDGYTRVLCNYEENRLREGSMVFVKASAPKCCCPQIYSDKDYQGHFFCPRNAEQSFVVDGYEGGPFANSVLGTLAEQMENDIDVDTYPYCPVTEEHEDVMMCSKVTNLQTEVATTDEVEPWSSARLISEDVYTSSGVYAGNSKMRGNRFYTEPCPNIYLRNGSDAKSNMYTSDALRGSYKKTCPYFDSCATPAVGVECNSSAAGDAFDTEFTFAGFVGKVTYVPKDPADDEFVVQYKVSFNDGRTEYDFAEADLVLEKEDFNYEVWWVERTRYNYIVRKKKPFRVVAPECTFDRVNDQYLPFALIDENGEALDSVSSSEYSPT 671          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A812VMA3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VMA3_SYMMI)

HSP 1 Score: 281 bits (718), Expect = 1.100e-84
Identity = 141/329 (42.86%), Postives = 193/329 (58.66%), Query Frame = 3
Query:  846 CVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCPIYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNWKRFYTREAATVLYNNATSSYSSGDLDGK-YHSTCEYFLQCALATGSFCSGDDREYTFKGQVGKITFVPDDPDIDQFGVTFNDGRTSYSFSQEHLQVEQDYN-YEIWWVQRTLYNFRVQARK 1826
            C+G R   K+ST I  C DNN +++    C D+ G  S +C  VGY+Q A   +CG  + DD+HCGTFLEIH G   PY    +++ DV + T +VSGY TTT+P TWM D  RV+CAY  + + VG+ V I+  APVCCCP  ++ + + GS LCP+     GPYAA L    + +  +    +YPFC +  DD D +M S Y+S  K ++TRE + V YN   + ++S DL G  Y   C YF  CAL+    CS DD  +TF G+VG++      P      VTFN+GRTSY   ++ L +E   + YEIWWV+RT   F V+ RK
Sbjct:    6 CLGKRYAKKKSTYIPACVDNNSSLNTLQGCYDIYGNYSSYCAQVGYTQNAFIALCGSEFEDDDHCGTFLEIHQGGGTPYSSETDIIGDVKITTRDVSGYYTTTLPMTWMGDPNRVLCAYTESYVRVGSTVYINHEAPVCCCPPAYASQSRTGSFLCPLGTGGSGPYAAYLNKTKDLLQNDIDSTSYPFCRSGVDDVDRVMCSTYDSKSKMYFTRECSPV-YNRTETLFTSDDLHGDDYVGVCPYFDNCALSQSGTCSSDDLRFTFMGRVGRVVGYDPSPITPVVTVTFNNGRTSYDIEEDDLNLEYTKSMYEIWWVKRTRSEFIVEKRK 333          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: K0R3B9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3B9_THAOC)

HSP 1 Score: 258 bits (659), Expect = 2.730e-69
Identity = 168/524 (32.06%), Postives = 250/524 (47.71%), Query Frame = 3
Query:  522 DRDTYTYAFPDSSDYTIGIIIDPCKGNS-----------YDCCHRFFGSPEYPMV---------------IDPDTSSYRAVDKFLF---------ADPTEIISNTTVVDKEGVEVSEDYSRLADDEIVIDDSCTAAGVPGGQSCVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSY--KDQLGSLLCPIYGSLEG-PYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVS-------EYESNWKRFYTREAATVLYNNATSSYSSGDLDGKYHSTCE----YFLQCALATGSF-CSGDDREYTFKGQVGKITFVPDDPD------IDQ-FGVTFNDGRTSYSFSQEHLQ-VEQDYNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVI 1919
            + + Y   FP   ++ + ++++PC  N            YDCC   +G  E                   +      ++A  +  F         AD    + +  +V++ G  +   +SR  DD + IDD C +   P   +CV  R    +S     C D+N TVD   +C    G    +C+   YS  A+ V CGG +AD + CGTFLE+H    +PY      LS   ++T   +G TTTTIP T+  DS+RV+C+YE   + V +MV + ++A  CCCP   S     ++G+ LCP   S EG P+A SLK++ E+   +   Q +P+CP  E+  D++M +       E   N    Y       +        +S DL GKY   C     +   CA    S  C G D  ++F+ ++G++  V D PD      + Q F VTFND RTSY FS + L  +  + NYE+W+VQR  Y   V+ RK   VT P CTFD+ N  ++P+AMLD +GN I
Sbjct:  114 EHEGYLEEFPAPDEWVVSLLVNPCGANGTRGREDHPALGYDCCDGQYGQGELSWAQKMLGAVISSSKLFCLGTGEYEFKAGTRNRFSNGFSTGIPADDDAPLHDVELVNEFGEPLLHVHSRRPDDVLYIDDECQSFRNPNS-NCVADRFAASKSKQFPACWDHNGTVDATLNCFTPEGRRQPNCMQFSYSVNALVVTCGGEFADVDSCGTFLEVHKTNGSPYDDESVTLSTTKVVTPVTNGMTTTTIPLTYSGDSSRVLCSYEEGKIGVNSMVRVKDNAAECCCPPWLSAIRASKVGAYLCPKRRSGEGGPFAPSLKSLEEEFVDDLHQQDFPWCPRGENGTDVLMCTQERPLSDELPENVAGKYLMRQCLDIGPTEDGKLTSRDLSGKYDRACPLGDVFNASCAAPNSSGQCMGKDHRFSFRNEIGRVVKVVDVPDRTGGDIVHQAFEVTFNDNRTSYVFSSDELHHLAPEANYEVWFVQRNRYEKIVRKRKSFRVTWPRCTFDTINERFFPWAMLDSNGNPI 636          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: F0YQ04_AURAN (SRCR domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQ04_AURAN)

HSP 1 Score: 236 bits (602), Expect = 2.660e-65
Identity = 148/418 (35.41%), Postives = 216/418 (51.67%), Query Frame = 3
Query:  846 CVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCG--GS-----YADDEHCGTFLEIHMGYDNPYVGTEE-MLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCP--IYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNW--KRFYTREAATVLYNNATSSYSSGDLDGK-YHSTCEYFLQCAL---ATGSFCSGD------------------------------DREYTFKGQVGKITFVPDDPD------IDQFG-------VTFNDGRTSYSFSQEHLQVEQD-YNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVI 1919
            C G R  M+       C+DNN TV+ +ASC D++G E  +C+ V ++QTA+ + CG  GS     ++   HCGTF+E+H    +PY   E  ++++  + T   +GYTTTTI             AY    + VG+MV I ES+P CCCP  ++ + + G+  CP  +     GPY+  L T+   +A +E    YP+CP LE+D+D +  S +   W  +R+Y  E   +  NN T  Y S  L GK Y   C Y+  C+     TGS+  G                               D  ++F+G +GKIT +P D +      +DQ+        VTFND RT+Y+F    L++ Q  +NY++WWVQRT YNF VQ +K + VT PTCTFDS N  Y+PY ++  DG+ I
Sbjct:   19 CQGTRLGMRPFPIQPYCSDNNATVNASASCFDVDGTERPNCVQVAFTQTAMIINCGEPGSPNNEDFSQHPHCGTFIELHRENGSPYNPDESFVINEKRIDTALTTGYTTTTID-----------LAY---GIQVGSMVYIKESSPECCCPPGYNNELKTGTFFCPKNMLEDTAGPYSNRLSTLNHYLAKDEAAAEYPYCPTLEEDQDTLQCSNFTDAWGGRRYYNTECPKIGGNNETGYYDSPYLVGKTYGGKCFYWPGCSAHPHRTGSYGEGGTVAGDLAYENDGCAHRCEVNDIANCPTNDMDTHFSFQGLLGKITCMPTDKEDCVNMALDQYDEDSIYYLVTFNDNRTNYAFRSTDLELHQPRHNYQLWWVQRTRYNFIVQKKKAIRVTEPTCTFDSINDRYFPYTIIRPDGSYI 422          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A7S4A5W8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5W8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 8.690e-59
Identity = 136/408 (33.33%), Postives = 209/408 (51.23%), Query Frame = 3
Query:  396 AQYTADTLIFREKMDAAEAELTATLKGGEYVEEHFYPDRQYTDRDTYTYAFPDSSDYTIGIIIDPCKGNSY------DCCHRFFGSPEYPMVIDPDTSSYRAV-----DKFLFADPTEIISNTTVVDKEGVEVSEDYSRLADDEIVIDDSCTAAGVPGGQ------------------SCVGFRKKMKRSTSIARCTDNNQTVDGAASCLDLN-GEESEHCLAVGYSQTAISVVCGGS-------YADDEHCGTFLEIHMGYDNPYVGTEE-MLSDVHLLTENVSGYTTTTIPTTWMHDST-RVMCAYEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCP--IYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNW--KRFYTRE 1490
            AQ+   +  ++E M+ +EA L   ++  +  ++HFYP R + DRD Y +  P    Y IG+I+DPC           DCC   FGS  YP V       Y  V     D  L A P EI++N  +VD  G E+ E   R ADDE+ +D+ C       G+                   C G R   +       C+DNN TVD    C D+  G    +C+ VG +QTA+ + CG S       +++ +HCGTFLEIH    +PY   EE ++++  + + N+SGYTT TI  T+    T +++C Y  +++ VG+MV + E +P CCCP  F+ +D+ G   CP   Y +  GP+AA L ++      +  + +YP+CP ++++ED IM ++Y  +W  +R Y +E
Sbjct:   19 AQFVETSEQYKEAMELSEATLQDEIRNTKDTQDHFYPARLFFDRDQYVFRPPHPQLYAIGMIVDPCGCMDAPDTCVPDCCVHRFGSAVYPWVKRELVDYYPRVPTSKFDHMLLAPPGEILANVNLVDVYGGEIEEGELRRADDEVFLDEGCDGIASEQGEYLYRLGEDGLLRPLSDKTHCQGMRLGNRPFPIKPNCSDNNATVDARQPCTDIETGITRPNCVQVGIAQTAVVINCGTSPNPDDPDFSEHQHCGTFLEIHRENGSPYHPDEEFIINEQRITSTNISGYTTQTINMTYGIGVTDKILCNYAESTMRVGSMVFVKEQSPWCCCPPAFNNEDKTGYSYCPKNAYENTVGPWAAKLTSLDHFKQNDVAVNSYPYCPVMDENEDKIMCADYTYDWGQRRNYNQE 426          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A7S2DUE1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUE1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 7.440e-32
Identity = 75/214 (35.05%), Postives = 122/214 (57.01%), Query Frame = 3
Query: 1365 AEKIAFEE-QLQTYPFCPALE-DDEDLIMVSE-------------------------YESNWKRFYTREAATVLYNNATSSYSSGDLDGKYHSTCEYFLQC-ALATGSFCSGDDREYTFKGQVGKITFVPDDPDIDQFGVTFNDGRTSYSFSQEHLQVEQDYNY-EIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVI 1919
            AE+I  E+ ++  YP+CP  E D++DL+M S+                         Y++  KRF+T   A + Y N +  + S DL   Y   C+YF  C +L  G    G+DR ++F G++G++++VPDD     + V+FNDGRT Y F    + + +  +Y ++WWVQRT + F V+ +K   V +P CT+D++N  YYPYA+++DDG+++
Sbjct:    1 AERITQEKREMNNYPYCPHFEKDNKDLMMCSKLTKKVNMMEGEPYRHAGTAGVDSAGYKAG-KRFFTEPCANMSYTNHSKLFESEDLANGYAGKCDYFDCCGSLKDGQQGCGEDRLFSFIGKIGRVSYVPDDL-TKPYLVSFNDGRTQYEFYDFEIDLRKPPSYYQVWWVQRTRFEFIVRRKKNFKVVAPMCTYDTTNDRYYPYAVVNDDGSIL 212          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: F0YFL4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFL4_AURAN)

HSP 1 Score: 138 bits (348), Expect = 1.010e-29
Identity = 98/314 (31.21%), Postives = 148/314 (47.13%), Query Frame = 3
Query: 1200 YEHTSLLVGTMVLISESAPVCCCPRVFSYKDQLGSLLCP--IYGSLEGPYAASLKTVAEKIAFEEQLQTYPFCPALEDDEDLIMVSEYESNW--KRFYTREAATVLYNNATSSYSSGDLDGK-YHSTCEYFLQCAL---ATGSFCSGD------------------------------DREYTFKGQVGKITFVPDDPD------IDQFG-------VTFNDGRTSYSFSQEHLQVEQD-YNYEIWWVQRTLYNFRVQARKPMTVTSPTCTFDSSNGLYYPYAMLDDDGNVIM*STEESPTIAYFGPRYALSAG 1985
            ++ +   VG+MV I ES+P CCCP  ++ + + G+  CP  +     GPY+  L T+   +A +E    YP+CP LE+D+D +  S +   W  +R+Y  E   +  NN T  Y S  L GK Y   C Y+  C+     TGS+  G                               D  ++F+G +GKIT +P D +      +DQ+        VTFND RT+Y+F    L++ Q  +NY++WWVQRT YNF VQ +K +   S   T  +    +Y   + DD  +++          AY G  YA  +G
Sbjct:  337 FDRSRRSVGSMVYIKESSPECCCPPGYNNELKTGTFFCPKNMLEDTAGPYSNRLSTLNHYLAKDEAAAEYPYCPTLEEDQDTLQCSNFTDAWGGRRYYNTECPKIGGNNETGYYDSPYLVGKTYGGKCFYWPGCSAHPHRTGSYGEGGTVAGDLAYENDGCAHRCEVNDIANCPTNDMDTHFSFQGLLGKITCMPTDKEDCVNMALDQYDEDSIYYLVTFNDNRTNYAFRSTDLELHQPRHNYQLWWVQRTRYNFIVQKKKAIRDGSTCGTVVTYTSGWYN--VCDDGWDIV--DAHVFCRDAYGGVGYASPSG 646          
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Match: A0A0P1A5Q1_PLAHL (RxLR-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5Q1_PLAHL)

HSP 1 Score: 122 bits (305), Expect = 1.680e-26
Identity = 75/248 (30.24%), Postives = 121/248 (48.79%), Query Frame = 3
Query:  531 TYTYAFPDSSDYTIGIIIDPCKGNSYDCCHRFFGSPEYPMVIDPDTSSYRAVDKFLFADPTEIISNTTVVDKEGVEVSEDYSRLADDEIVIDDSC---------------TAAGVPGGQS-----CVGFRKKMKRSTSIAR--CTDNNQTVDGAASCLDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYVGTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEH 1208
            T TY+F + + Y+IG+++DPC+G++++CC   FG P Y                    DPT I    ++VD+ G  +    SR+ D     D SC               +++GV   ++     C+G  + +     + R  C D N +V+   SC  ++G +   C+AVGY QT+  V CGG++    HCGTFLE+H   DN     E +LS   L+ +  +G+ TTT+P  +  D  R +C  ++
Sbjct:   77 TDTYSFVEPTAYSIGLLLDPCRGHAFNCCIDRFGEPAY-------------------MDPTHIAEKISLVDESGATLDMQVSRIGDRPSTFDQSCYLDDDLIPFRLQKTLSSSGVSVSRNYTNSGCIGRLQGLVSMEKVVRPACWDYNDSVNALDSCHHVDGRKGNTCVAVGYMQTSYIVQCGGAFELSNHCGTFLELHEP-DN-----EVILSQTRLMRQYPNGFRTTTLPLFFRGDRARTVCMGDY 299          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig772.18970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LT32_ECTSI1.100e-24065.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPT0_9STRA1.230e-11339.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FKQ0_9STRA8.150e-10937.96Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812VMA3_SYMMI1.100e-8442.86Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
K0R3B9_THAOC2.730e-6932.06Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
F0YQ04_AURAN2.660e-6535.41SRCR domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S4A5W8_9STRA8.690e-5933.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2DUE1_9STRA7.440e-3235.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YFL4_AURAN1.010e-2931.21Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0P1A5Q1_PLAHL1.680e-2630.24RxLR-like protein n=1 Tax=Plasmopara halstedii Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig772contigF-serratus_M_contig772:73627..78735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score691.4
Seed ortholog evalue3.9e-196
Seed eggNOG ortholog2880.D8LT32
Hectar predicted targeting categoryother localisation
EggNOG OGs2CM7C@1,2QPIH@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2268
Cds size1890
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig772.18970.1prot_F-serratus_M_contig772.18970.1Fucus serratus malepolypeptideF-serratus_M_contig772 73970..78700 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932306.3953426-UTR-F-serratus_M_contig772:73626..739691622932306.3953426-UTR-F-serratus_M_contig772:73626..73969Fucus serratus maleUTRF-serratus_M_contig772 73627..73969 -
1690964244.7236707-UTR-F-serratus_M_contig772:73626..739691690964244.7236707-UTR-F-serratus_M_contig772:73626..73969Fucus serratus maleUTRF-serratus_M_contig772 73627..73969 -
1622932306.6073763-UTR-F-serratus_M_contig772:78700..787351622932306.6073763-UTR-F-serratus_M_contig772:78700..78735Fucus serratus maleUTRF-serratus_M_contig772 78701..78735 -
1690964244.8493714-UTR-F-serratus_M_contig772:78700..787351690964244.8493714-UTR-F-serratus_M_contig772:78700..78735Fucus serratus maleUTRF-serratus_M_contig772 78701..78735 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932306.4162428-CDS-F-serratus_M_contig772:73969..741191622932306.4162428-CDS-F-serratus_M_contig772:73969..74119Fucus serratus maleCDSF-serratus_M_contig772 73970..74119 -
1690964244.7339175-CDS-F-serratus_M_contig772:73969..741191690964244.7339175-CDS-F-serratus_M_contig772:73969..74119Fucus serratus maleCDSF-serratus_M_contig772 73970..74119 -
1622932306.4324405-CDS-F-serratus_M_contig772:74483..746341622932306.4324405-CDS-F-serratus_M_contig772:74483..74634Fucus serratus maleCDSF-serratus_M_contig772 74484..74634 -
1690964244.7453928-CDS-F-serratus_M_contig772:74483..746341690964244.7453928-CDS-F-serratus_M_contig772:74483..74634Fucus serratus maleCDSF-serratus_M_contig772 74484..74634 -
1622932306.453593-CDS-F-serratus_M_contig772:74865..750151622932306.453593-CDS-F-serratus_M_contig772:74865..75015Fucus serratus maleCDSF-serratus_M_contig772 74866..75015 -
1690964244.7613506-CDS-F-serratus_M_contig772:74865..750151690964244.7613506-CDS-F-serratus_M_contig772:74865..75015Fucus serratus maleCDSF-serratus_M_contig772 74866..75015 -
1622932306.468674-CDS-F-serratus_M_contig772:75165..753401622932306.468674-CDS-F-serratus_M_contig772:75165..75340Fucus serratus maleCDSF-serratus_M_contig772 75166..75340 -
1690964244.7734306-CDS-F-serratus_M_contig772:75165..753401690964244.7734306-CDS-F-serratus_M_contig772:75165..75340Fucus serratus maleCDSF-serratus_M_contig772 75166..75340 -
1622932306.4864058-CDS-F-serratus_M_contig772:75663..758261622932306.4864058-CDS-F-serratus_M_contig772:75663..75826Fucus serratus maleCDSF-serratus_M_contig772 75664..75826 -
1690964244.7840364-CDS-F-serratus_M_contig772:75663..758261690964244.7840364-CDS-F-serratus_M_contig772:75663..75826Fucus serratus maleCDSF-serratus_M_contig772 75664..75826 -
1622932306.5107384-CDS-F-serratus_M_contig772:76261..764831622932306.5107384-CDS-F-serratus_M_contig772:76261..76483Fucus serratus maleCDSF-serratus_M_contig772 76262..76483 -
1690964244.798131-CDS-F-serratus_M_contig772:76261..764831690964244.798131-CDS-F-serratus_M_contig772:76261..76483Fucus serratus maleCDSF-serratus_M_contig772 76262..76483 -
1622932306.5466297-CDS-F-serratus_M_contig772:76848..771661622932306.5466297-CDS-F-serratus_M_contig772:76848..77166Fucus serratus maleCDSF-serratus_M_contig772 76849..77166 -
1690964244.807936-CDS-F-serratus_M_contig772:76848..771661690964244.807936-CDS-F-serratus_M_contig772:76848..77166Fucus serratus maleCDSF-serratus_M_contig772 76849..77166 -
1622932306.561771-CDS-F-serratus_M_contig772:77610..776911622932306.561771-CDS-F-serratus_M_contig772:77610..77691Fucus serratus maleCDSF-serratus_M_contig772 77611..77691 -
1690964244.8177004-CDS-F-serratus_M_contig772:77610..776911690964244.8177004-CDS-F-serratus_M_contig772:77610..77691Fucus serratus maleCDSF-serratus_M_contig772 77611..77691 -
1622932306.5769682-CDS-F-serratus_M_contig772:77990..783451622932306.5769682-CDS-F-serratus_M_contig772:77990..78345Fucus serratus maleCDSF-serratus_M_contig772 77991..78345 -
1690964244.8287053-CDS-F-serratus_M_contig772:77990..783451690964244.8287053-CDS-F-serratus_M_contig772:77990..78345Fucus serratus maleCDSF-serratus_M_contig772 77991..78345 -
1622932306.591564-CDS-F-serratus_M_contig772:78575..787001622932306.591564-CDS-F-serratus_M_contig772:78575..78700Fucus serratus maleCDSF-serratus_M_contig772 78576..78700 -
1690964244.8389087-CDS-F-serratus_M_contig772:78575..787001690964244.8389087-CDS-F-serratus_M_contig772:78575..78700Fucus serratus maleCDSF-serratus_M_contig772 78576..78700 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig772.18970.1

>prot_F-serratus_M_contig772.18970.1 ID=prot_F-serratus_M_contig772.18970.1|Name=mRNA_F-serratus_M_contig772.18970.1|organism=Fucus serratus male|type=polypeptide|length=630bp
MDSSCCVVSAHLSTPSSVRGDMSRSWKLSSLTHMKERHDSSSSCGKQKRL
ATHMFRDAILRGRYQFYRGQDKLDSPYGVKAYVPSAARMSRRFWRHRRVS
FVGATAIAVFVMMGRAKFAEAQYTADTLIFREKMDAAEAELTATLKGGEY
VEEHFYPDRQYTDRDTYTYAFPDSSDYTIGIIIDPCKGNSYDCCHRFFGS
PEYPMVIDPDTSSYRAVDKFLFADPTEIISNTTVVDKEGVEVSEDYSRLA
DDEIVIDDSCTAAGVPGGQSCVGFRKKMKRSTSIARCTDNNQTVDGAASC
LDLNGEESEHCLAVGYSQTAISVVCGGSYADDEHCGTFLEIHMGYDNPYV
GTEEMLSDVHLLTENVSGYTTTTIPTTWMHDSTRVMCAYEHTSLLVGTMV
LISESAPVCCCPRVFSYKDQLGSLLCPIYGSLEGPYAASLKTVAEKIAFE
EQLQTYPFCPALEDDEDLIMVSEYESNWKRFYTREAATVLYNNATSSYSS
GDLDGKYHSTCEYFLQCALATGSFCSGDDREYTFKGQVGKITFVPDDPDI
DQFGVTFNDGRTSYSFSQEHLQVEQDYNYEIWWVQRTLYNFRVQARKPMT
VTSPTCTFDSSNGLYYPYAMLDDDGNVIM*
back to top

mRNA from alignment at F-serratus_M_contig772:73627..78735-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig772.18970.1 ID=mRNA_F-serratus_M_contig772.18970.1|Name=mRNA_F-serratus_M_contig772.18970.1|organism=Fucus serratus male|type=mRNA|length=5109bp|location=Sequence derived from alignment at F-serratus_M_contig772:73627..78735- (Fucus serratus male)
CGAGGATCTGCACGCAAGGGCTTTTCTCATACATCATGGATTCTTCTTGT TGTGTTGTATCCGCACACCTCTCTACACCAAGCAGTGTGCGTGGAGACAT GTCTCGTAGTTGGAAACTTTCTTCGCTTACCCACATGAAGGAGAGACACG ACAGCAGCAGGTACGTCGTCTGCGGTGGTGAGTTGGGGATACATCTCACT CCAAAGAGGGAATGGCAAAGACTTTAATACCAAGCACGTTGCCGTACCTT TAGGACGGGAAATCGAACTCGAGTCGTCACTCAATACGGTCGACCCCCTT CAGAAACATGGAATTGCAATAGGATCATTTGTTGCCAAGGGAAGCACGTT TTCTGTTCATTCGATTATGTCCCTGGTCGAACGCGAGCAGCAGCTGTGGA AAACAAAAGAGGCTGGCTACCCATATGTTCCGAGACGCGATCCTACGAGG ACGTTATCAGTTCTATCGTGGACAAGACAAACTCGACTCGCCGTATGGCG TAAAGGCATATGTGCCTTCTGCAGCTCGAATGTCTCGGCGATTCTGGAGG CACCGCCGGGTGTCTTTTGTCGGAGCCACTGCAATAGCGGTATTCGTTAT GATGGGTAGAGCTAAATTTGCCGAAGCTCAGTACACGGCAGATACATTAA TTTTCCGAGAGAAAATGGACGCGGCCGAAGCCGAGCTCACGGCGACACTA AAGGGAGGAGAATACGTGGAAGAGCATTTTTACCCTGACCGCCAGGTAGA AGAGTGCCGACGTATGTTTGAGAATGCTCCGACATATTTGCGAGACGTGC TATTGCAAGCTGTACCTTAAAATGGATCTACGTAACGAGATTTTCGTCGA GCCAGCGTCGCCACTATTCGTTCCGGTTGCGAGAGCGATATGGAAGGCAA GATGATAACGATGACACCTTAGACTTACACAAAAACTTGGTGCCTACACC TTCCTAGCGAATAAAGTCACTACCGCGCCGTTTTGTGGCCCTTGGTAACG ACAACTCTCCCATCGGCACTACGGGGAAATGGCATGCGGAGAAGTACACC GACCGAGATACCTACACCTACGCGTTCCCGGATTCATCCGACTACACCAT CGGAATTATTATTGATCCCTGTAAGGTAATTTCGTCGTTTCGTAGCTAGC GGCATGCTCCCCATTTTTGTGCTTCACGCGGCCTTGTGTTAGCCTTCAGC TTACACTTTGGGATTGCGGGTGGTAGCTGATGCTCTAAATAATAATTTAA GACCAGTTGGCCAAATGTTCCCGGTTGATGTGTAGCCTTGAAGATCATAT GATAGTAGCAGTATTAGTGGGATTTCGAACGCTATCTCCGCTGGTGGGAG GAACTATTATAGTCGTTTGATCTCAACGAAACAAAGTGCACGGCCATCCC TCGGTAATAACGAAACCCGACACCCACGAAGACGTAGTCTTTCTTCTGCC CGTCCCATATACATATACATATGTATTCACATGAATAGTTTACTAGCCTT CCCACCTCACATTTAACTGATGGGCATAATACGTGCGTGTGTTTGGCCGA TAACGCGTTTTATCTCAAGGGAAATTCCTATGACTGTTGTCACCGGTTCT TCGGCTCTCCGGAATACCCGATGGTAATCGATCCCGACACTTCGTCGTAC CGCGCAGTCGATAAGTTCCTCTTCGCCGATCCGACTGAGATTATTTCAAA CACCACCGTCGTTGACAAGGAAGGCGTCGAGGTATCTGAAGATTATAGTC GATTGGCAGACGACGAGATCGTGATCGACGACAGCTGTACGGCAGCAGGG GTGCCGGGGGGCCAGTCTTGCGTCGGATTCCGCAAGAAGATGAAGCGATC GACCAGCATCGCGCGTTGCACCGACAACAACCAGACGGTAGATACTTTTT CGCCAGGTTACCCTTTCTGCGCTTTCCTCTCACCCCCAACTCGTACTCTT CATAAGATAGGAATATTAATGTTGTATGGTGGGCGGACCAGGCCTCTCCT GCGTTCGCGGAAGATGTTCGCCACTAAAGCAGGAGAAATTCTCTTTTTCT GCCTTTGGGAGGATACTCCGCCACTCGTCAGTATACTCGCACCCATTCTG ATCTTAAATTTTGTTGGGTTCCACCGAGAGTTAACCGATGCTTGTAGCAA AACTCGACAATAGCTCGACAGTCGTTCCAAGAGTGGAAATTTTACATGTC CACGAGAGTGGCTATTGGTTTCAAATTCGAGCTCTCAATTTTCCAAAATC AGGTCGATGGTGCGGCCTCGTGTCTGGATCTGAACGGCGAGGAGTCGGAG CATTGCCTCGCCGTGGGCTACTCTCAGACGGCGATCAGCGTCGTGTGCGG GGGATCTTACGCGGACGACGAACATTGCGGGACGTTTTTGGAGATACACA TGGGTTACGACAACCCCTACGTGGGGACCGAAGAGATGCTGTCCGATGTC CATCTTCTCACGGAAAACGTTTCGGTAGGTGCGCGAGCTTGCACTCATGC CCGAAAGATTCGCCCATGCTTGAATGGGCCTAATCTTCTATATCTCATGT GATCACCATTGTTGGTAAATGTCGAGCAACCTCTTCGCTGTCATGCTGTA CGCGTTGTCTCGTTGCCCCTTATAACAATAATGTTGTTCGTGCAATTTGA TCGAAATGGCAACTATGCACGTAAAACAAGGCGAAACTCTTCGTCGACAT CATGCTCTAGTGTTTTGATCTCTGTAATGTAGAACACGTCTAGAATAACC ATCGAACGTACAATCTGACACTGTAAAGAAGCGATTGGGATTTCCCTTTC GGCGGCGCGTTTTTACTAAGCTCTTCTTCTGAACACAAGTTGTGTTCTCT GCTTGTATTACCCCACCGCCTCGACGACCGAGCAATCGAAGTAACATTTT CGTGAACAGGGCTATACGACCACCACAATACCCACCACGTGGATGCACGA TTCCACTCGAGTCATGTGCGCGTACGAACACACCTCGCTTCTCGTGGGAA CTATGGTCCTTATCTCTGAGAGCGCGCCCGTCTGCTGCTGCCCTCGAGTC TTCTCCTATAAGGATCAGTTGGGTGGGCAAAAATACCCTAGAGCTGTTGG TTGTGTTTTCTTGGTCCGTACCCAACAACTCTTGCTAGGCAGAATCCGAC CAACCAATGCGTCGAGCTTGGAACAATATCGATGGACAATATATTATAAT TAAAAAGGATATCCAATCAAACGGATTTGTGTGCCGTTCCTAGGGCTGGT GTTTTTTTGTGTTCTCAAACAAGGACAATGGAATGATGATCCTGAGATAG ATATCAACCCGAGCATCATTCAAGAAGCTGTCGTGCTTCATAATCACCCG CCTCTTAGCCGGCCAATATTATCGCCGATTGCTTTTGGTTGTTAGGATCT CTTCTGTGCCCCATTTATGGCTCTCTGGAGGGTCCGTATGCAGCTTCGCT TAAAACAGTAGCAGAGAAAATTGCGTTTGAGGAGCAATTACAGACGTACC CATTCTGCCCGGCGCTCGAGGATGATGAGGATCTCATTATGGTATCCGAG TATGAATCCAACTGGAAGCGGTGAGAAAATCTAGCGTGACTGTGTTCGGC TGTGAAATCCGATACGCCAGCAAGTGCCTCTCCGTCAAAAAAAATCAGAG ACTCCCCACGGAATCTGAGCAAGTACATTCACGCGTCACACGGATCACAC CTCATGCCCTCATCGATAAGTTTCTACACAAGAGAGGCGGCGACGGTGCT GTATAATAATGCGACCTCGTCTTACTCCAGCGGAGACCTAGACGGGAAAT ACCACTCGACCTGCGAATATTTTCTCCAGTGTGCGCTGGCTACCGGAAGC TTCTGCAGTGGAGACGACAGGTTTGAAGTAGTAGTGTGCGGGATCAACGA AGCGTAGGTTATGTACTGCTGAGTTTCGTCGAATGAGGAAATGGAAAGTG CGAGTAAAGAGAACAGGAGTGGTGACTGTTTTTGCTTTCATGGGCATCGA GTTGAAGAAAATTCGGCGTCGGATCTCTTATCAGATCCCCGACCAAGAAG GAAACCCACACAGGATCCGTCCATCAACGTGCCCGCTGTCCACGCCGCCA GGGAGTACACGTTCAAGGGACAAGTGGGGAAGATCACGTTTGTGCCTGAC GATCCCGACATAGATCAATTTGGAGTGACGTTTAATGATGGGCGCACAAG CTACTCTTTCAGCCAAGAACACCTGCAGGTGGAGCAGGACTACAACTATG AGGTGAAAGCTGGCGATCCAAATTGACTGATTGATAGTTTCAGCTCCAGA TATCGATGCATACGCGAGTCACATCACTTACCCGGTCAATGCGTGTGTAA TAAACCCCGCTGAACGTTTTATTACGAGCAGACGTCTACAAGGACGACGG CATAGTACGAGCGCCCACGGATTCGGTTTTCAAGCGCCGCGCCAATATTC GGGGATGAGATATGCTCCTTCGACCAAATGTCAACGTCGTTCATTCTTGT GAAAAAGTTGCAACAGCCTCGCAATCAATCCACCAGCTATGCATTTATCT GTATTTATCTGTATTTTGATCCTACCCGCACTATACCCGTGCTCGTCGTC TTTTCGTCGGACGTAGATATGGTGGGTCCAACGAACACTCTACAATTTCC GAGTTCAAGCACGAAAGCCAATGACAGTGACGAGTCCGACGTGCACGTTC GACAGTAGCAATGGCCTGTACTACCCCTACGCAATGCTTGACGATGACGG CAATGTGATCATGTGATCCACTGAAGAAAGCCCTACGATTGCATATTTTG GACCCAGATACGCCCTCTCCGCTGGTGTAGCTTTTGAGCGCATAGTCAAT TGTAGATATGCCGAATGCCTACGCTGGTATCAGGAATGCGTTATAATATA CTTTATACGAATTATACGAATGAAGGAGTATATTGGAACCAGCATAAACT ACTGTCCTGTGCAAGTAGTACCCTCTCGAACAAAATTAGGAGGGCATCTG CAAGGCGGCGAAGGTGTAAAACGACACGCAGCTGCTGCTATTATTTCTAC ATTTATCTTGAGAGCGAAGAATGTTGAAAGCATGATGAAGCAAAACTCGC GTGACGGCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig772:73627..78735-

>mRNA_F-serratus_M_contig772.18970.1 ID=mRNA_F-serratus_M_contig772.18970.1|Name=mRNA_F-serratus_M_contig772.18970.1|organism=Fucus serratus male|type=CDS|length=3780bp|location=Sequence derived from alignment at F-serratus_M_contig772:73627..78735- (Fucus serratus male)
ATGGATTCTTCTTGTTGTGTTGTATCCGCACACCTCTCTACACCAAGCAG
TGTGCGTGGAGACATGTCTCGTAGTTGGAAACTTTCTTCGCTTACCCACA
TGAAGGAGAGACACGACAGCAGCAGATGGATTCTTCTTGTTGTGTTGTAT
CCGCACACCTCTCTACACCAAGCAGTGTGCGTGGAGACATGTCTCGTAGT
TGGAAACTTTCTTCGCTTACCCACATGAAGGAGAGACACGACAGCAGCAG
CAGCTGTGGAAAACAAAAGAGGCTGGCTACCCATATGTTCCGAGACGCGA
TCCTACGAGGACGTTATCAGTTCTATCGTGGACAAGACAAACTCGACTCG
CCGTATGGCGTAAAGGCATATGTGCCTTCTGCAGCTCGAATGTCTCGGCG
ATTCTGGAGGCACCGCCGGGTGTCTTTTGTCGGAGCCACTGCAATAGCGG
TATTCGTTATGATGGGTAGAGCTAAATTTGCCGAAGCTCAGTACACGGCA
GATACATTAATTTTCCGAGAGAAAATGGACGCGGCCGAAGCCGAGCTCAC
GGCGACACTAAAGGGAGGAGAATACGTGGAAGAGCATTTTTACCCTGACC
GCCAGCAGCTGTGGAAAACAAAAGAGGCTGGCTACCCATATGTTCCGAGA
CGCGATCCTACGAGGACGTTATCAGTTCTATCGTGGACAAGACAAACTCG
ACTCGCCGTATGGCGTAAAGGCATATGTGCCTTCTGCAGCTCGAATGTCT
CGGCGATTCTGGAGGCACCGCCGGGTGTCTTTTGTCGGAGCCACTGCAAT
AGCGGTATTCGTTATGATGGGTAGAGCTAAATTTGCCGAAGCTCAGTACA
CGGCAGATACATTAATTTTCCGAGAGAAAATGGACGCGGCCGAAGCCGAG
CTCACGGCGACACTAAAGGGAGGAGAATACGTGGAAGAGCATTTTTACCC
TGACCGCCAGTACACCGACCGAGATACCTACACCTACGCGTTCCCGGATT
CATCCGACTACACCATCGGAATTATTATTGATCCCTGTAAGTACACCGAC
CGAGATACCTACACCTACGCGTTCCCGGATTCATCCGACTACACCATCGG
AATTATTATTGATCCCTGTAAGGGAAATTCCTATGACTGTTGTCACCGGT
TCTTCGGCTCTCCGGAATACCCGATGGTAATCGATCCCGACACTTCGTCG
TACCGCGCAGTCGATAAGTTCCTCTTCGCCGATCCGACTGAGATTATTTC
AAACACCACCGTCGTTGACAAGGAAGGCGTCGAGGTATCTGAAGATTATA
GTCGATTGGCAGACGACGAGATCGTGATCGACGACAGCTGTACGGCAGCA
GGGGTGCCGGGGGGCCAGTCTTGCGTCGGATTCCGCAAGAAGATGAAGCG
ATCGACCAGCATCGCGCGTTGCACCGACAACAACCAGACGGGAAATTCCT
ATGACTGTTGTCACCGGTTCTTCGGCTCTCCGGAATACCCGATGGTAATC
GATCCCGACACTTCGTCGTACCGCGCAGTCGATAAGTTCCTCTTCGCCGA
TCCGACTGAGATTATTTCAAACACCACCGTCGTTGACAAGGAAGGCGTCG
AGGTATCTGAAGATTATAGTCGATTGGCAGACGACGAGATCGTGATCGAC
GACAGCTGTACGGCAGCAGGGGTGCCGGGGGGCCAGTCTTGCGTCGGATT
CCGCAAGAAGATGAAGCGATCGACCAGCATCGCGCGTTGCACCGACAACA
ACCAGACGGTCGATGGTGCGGCCTCGTGTCTGGATCTGAACGGCGAGGAG
TCGGAGCATTGCCTCGCCGTGGGCTACTCTCAGACGGCGATCAGCGTCGT
GTGCGGGGGATCTTACGCGGACGACGAACATTGCGGGACGTTTTTGGAGA
TACACATGGGTTACGACAACCCCTACGTGGGGACCGAAGAGATGCTGTCC
GATGTCCATCTTCTCACGGAAAACGTTTCGGTCGATGGTGCGGCCTCGTG
TCTGGATCTGAACGGCGAGGAGTCGGAGCATTGCCTCGCCGTGGGCTACT
CTCAGACGGCGATCAGCGTCGTGTGCGGGGGATCTTACGCGGACGACGAA
CATTGCGGGACGTTTTTGGAGATACACATGGGTTACGACAACCCCTACGT
GGGGACCGAAGAGATGCTGTCCGATGTCCATCTTCTCACGGAAAACGTTT
CGGGCTATACGACCACCACAATACCCACCACGTGGATGCACGATTCCACT
CGAGTCATGTGCGCGTACGAACACACCTCGCTTCTCGTGGGAACTATGGT
CCTTATCTCTGAGAGCGCGCCCGTCTGCTGCTGCCCTCGAGTCTTCTCCT
ATAAGGATCAGTTGGGGCTATACGACCACCACAATACCCACCACGTGGAT
GCACGATTCCACTCGAGTCATGTGCGCGTACGAACACACCTCGCTTCTCG
TGGGAACTATGGTCCTTATCTCTGAGAGCGCGCCCGTCTGCTGCTGCCCT
CGAGTCTTCTCCTATAAGGATCAGTTGGGATCTCTTCTGTGCCCCATTTA
TGGCTCTCTGGAGGGTCCGTATGCAGCTTCGCTTAAAACAGTAGCAGAGA
AAATTGCGTTTGAGGAGCAATTACAGACGTACCCATTCTGCCCGGCGCTC
GAGGATGATGAGGATCTCATTATGGTATCCGAGTATGAATCCAACTGGAA
GCGGATCTCTTCTGTGCCCCATTTATGGCTCTCTGGAGGGTCCGTATGCA
GCTTCGCTTAAAACAGTAGCAGAGAAAATTGCGTTTGAGGAGCAATTACA
GACGTACCCATTCTGCCCGGCGCTCGAGGATGATGAGGATCTCATTATGG
TATCCGAGTATGAATCCAACTGGAAGCGTTTCTACACAAGAGAGGCGGCG
ACGGTGCTGTATAATAATGCGACCTCGTCTTACTCCAGCGGAGACCTAGA
CGGGAAATACCACTCGACCTGCGAATATTTTCTCCAGTGTGCGCTGGCTA
CCGGAAGCTTCTGCAGTGGAGACGACAGTTTCTACACAAGAGAGGCGGCG
ACGGTGCTGTATAATAATGCGACCTCGTCTTACTCCAGCGGAGACCTAGA
CGGGAAATACCACTCGACCTGCGAATATTTTCTCCAGTGTGCGCTGGCTA
CCGGAAGCTTCTGCAGTGGAGACGACAGGGAGTACACGTTCAAGGGACAA
GTGGGGAAGATCACGTTTGTGCCTGACGATCCCGACATAGATCAATTTGG
AGTGACGTTTAATGATGGGCGCACAAGCTACTCTTTCAGCCAAGAACACC
TGCAGGTGGAGCAGGACTACAACTATGAGGGAGTACACGTTCAAGGGACA
AGTGGGGAAGATCACGTTTGTGCCTGACGATCCCGACATAGATCAATTTG
GAGTGACGTTTAATGATGGGCGCACAAGCTACTCTTTCAGCCAAGAACAC
CTGCAGGTGGAGCAGGACTACAACTATGAGATATGGTGGGTCCAACGAAC
ACTCTACAATTTCCGAGTTCAAGCACGAAAGCCAATGACAGTGACGAGTC
CGACGTGCACGTTCGACAGTAGCAATGGCCTGTACTACCCCTACGCAATG
CTTGACGATGACGGCAATGTGATCATGTGAATATGGTGGGTCCAACGAAC
ACTCTACAATTTCCGAGTTCAAGCACGAAAGCCAATGACAGTGACGAGTC
CGACGTGCACGTTCGACAGTAGCAATGGCCTGTACTACCCCTACGCAATG
CTTGACGATGACGGCAATGTGATCATGTGA
back to top