mRNA_F-serratus_M_contig7713.18967.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 330 bits (845), Expect = 8.180e-104 Identity = 196/415 (47.23%), Postives = 256/415 (61.69%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRAGLDVERKALQQPNH-GASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAXXXXXXXXXXXXSACPASKRFCGGFMAASQAQAASASTVTAAPSLPA--EHFLNEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAAL 1298
G+DLA+ I +MI+ HGLTG V C TDCEPSMVKAGR+L + L H+GC+ HR+E T+ VF+G + ++A ARAVV RY +SSQ +GRL GI+ + PL V+QDVETRWWS+ +M+ERL+YL +A++LHES DN+AP+L DW VL L+EP+L PFM QK LE + VTGS+ VP I +LR GL+ L+ + G SA A +LP EAL +DF NR+GDGS IL +REG RRQPQGF+ QV ATA+DPR K LYG+ EH VW+AVA A DIA +S TA S GS PA + F AA+ A A +A++ +L E + EV ++ G+++ GK +Y DPLDWWR ++FP LAAL
Sbjct: 122 GEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDN-TATS--GSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAAL 532
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.990e-96 Identity = 189/424 (44.58%), Postives = 255/424 (60.14%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRAGLDV---ERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRMTALSAAGSTPAXXXXXXXXXXXXSACPASKRFCGGFMAASQAQAASASTVTA------APSLPAEHFLNEAGREVTRYRVASGLAMEEAQESG---KILYPDPLDWWRINAVKFPLLAAL 1298
G+DLA + M++ H LTG V+ C TDCEPSM+KAGR+L D + + H+GC+ HR+E T+ VF+G + ++ LAR +V RY KSSQ A RL +LCGI+ + PL V+QDVETRWWST +MV RL+YL +A++LHES+D V PLL DW VL L+EP+L PFM QK LE + VTGS+ + + +LR GL+ + KA+ Q G A + P EAL DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+ EH GVW+AVA AA DIA A + A + PA ASKR M+A +A AA + E + EV+ ++ A G+ + + Q++ K ++ +PLD WR +++PLLAAL
Sbjct: 86 GEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQ--QGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPA---SAEKPASDPVQTQPAPLGGGQGASKR---PRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAAL 500
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 280 bits (715), Expect = 2.110e-86 Identity = 145/291 (49.83%), Postives = 188/291 (64.60%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 938
G+DL +++K MI +GLTG V TDCEP MVKAGR+L ++ + H+GC CHR E +T+ F GPGV K++AL R VVTRYT SSQA+ RL+++C IV + KV+QDVETRWWST +D++ PLL DW VL+L+EP+L PFM QK LE S VT SLV I DLR LD + LQ + A ++V A+ +L C AL D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A
Sbjct: 39 GEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA 313
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 290 bits (742), Expect = 6.600e-85 Identity = 148/291 (50.86%), Postives = 196/291 (67.35%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 938
G+DL +++K MI +GLTG V TDCE SMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRYT SSQA+ RL+++C IV + V+QDVETRWWST + RL+ LRR + HE +D+ PLL DW VL+L+E +L PFM QK LE S VT LV P I DL+ GLD + LQ + A ++V A+ ++ C +AL D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+ EH VW A A A +A
Sbjct: 51 GEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVA 341
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 246 bits (628), Expect = 2.890e-72 Identity = 135/293 (46.08%), Postives = 185/293 (63.14%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 938
G+DL +++K MI +GLT V TDCEPSMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRY SSQA+ RL+++ IV + KV+QDVETRWWST + + RL+ LRR + HE +D++ PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I DLR LD + LQ A ++V A+ KD F + + ++ +P+GF+K QV+ATALDPR K LYG+ EH VW+AVA A +A
Sbjct: 95 GEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA 369
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.620e-45 Identity = 117/296 (39.53%), Postives = 151/296 (51.01%), Query Frame = 3
Query: 69 GDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDA-VLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNNVTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQ 950
GD LA IK + HGLTG V TDCEPSMVK GR+L DA V +GC +R+E +++VF+GP VKK M LAR +VTRY SSQAA RL++ +G+ +VIQDV VTGSLVVP I DLR L+ L + + A V A ++PC++AL D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV +E VW+ V A IA T+
Sbjct: 86 GDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV---------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 8.900e-18 Identity = 81/191 (42.41%), Postives = 102/191 (53.40%), Query Frame = 3
Query: 741 DFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVR-MTALSAAGSTPAXXXXXXXXXXXXSACPASKRFCGGFMAASQAQAASASTVT----AAPSLPAEHFLNEAGREVTRYRVASGLAMEEAQESGKILYPDPLDWWRINAVKFPLLAAL 1298
DF NR+GDG +IL ++EG RRQP GF+ VQV+ATALDPR K+LYGV +E VW+ V A IA T+ S A S G XXXXXXXXXXXX AQA + A S + E+T ++V++G+ M E + G +Y DPLDWWR+ FP LA L
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANL 240
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 9.760e-18 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query: 690 VLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAV 914
V AR ++PC++AL DF NR+GDG +IL ++EGPRRQP GF+ VQV+ATALDPR K+L+GV +E VW+ V
Sbjct: 155 VNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO) HSP 1 Score: 84.3 bits (207), Expect = 1.150e-14 Identity = 79/269 (29.37%), Postives = 128/269 (47.58%), Query Frame = 3
Query: 72 DDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSM-ALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVELH-ESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNN-VTGSLVVPLICDLRAGLDVERKALQQPNHGASAVVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKML 869
D++ +++ +I + GLTG V TD +MV A + L L H+ C H I + + V + + AR VV+ + S++A +L +G PLK++Q+V+TRW ST M++RL+ LR V SL N L D++++ VLAPF Y ++L V+ S ++P+I ++ + E+ AL + N AS++ +A L + N R + I +V +AT LDPR K L
Sbjct: 18 DNIKEALLELISDWGLTGSVAAMVTDNAANMVSAIQKLG----LRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEELSGEKRVSASKIIPIIRMIQHKV-AEKTALAR-NASASSLGIA-----------LQQYINKRCSNVESI---------------RVLALATLLDPRFKTL 254
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Match: A0A669B7A9_ORENI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669B7A9_ORENI) HSP 1 Score: 83.2 bits (204), Expect = 1.840e-13 Identity = 58/190 (30.53%), Postives = 100/190 (52.63%), Query Frame = 3
Query: 72 DDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDG-PGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMVERLVYLRRAVE--LHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNN-VTGSLVVPLICDLR 629
+++A+ K +++ G+ V TD P+M+ + +IL + H C H + + D PG+++ AR +V+ + S+ A +L ++ +G LK++Q+V+TRW ST +M++RL R V L ++AP+ +V E LE VL+PF +L V+GS V+PL+C LR
Sbjct: 69 ENIAEVKKVLMEEWGIQNKVRCLVTDAAPNMISSSKILK----VRHTKCIAHTLNLIVRKSIDNTPGLEEIRGKARKMVSYFRSSATAKEKLCQMQQQMGRSHLKLLQEVDTRWNSTYTMLQRLYEEREPVSAALVSMRTDLAPVTAEEYHSVKECLE-VLSPFYTATTELSGEQRVSGSKVIPLVCMLR 253 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7713.18967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7713.18967.1 >prot_F-serratus_M_contig7713.18967.1 ID=prot_F-serratus_M_contig7713.18967.1|Name=mRNA_F-serratus_M_contig7713.18967.1|organism=Fucus serratus male|type=polypeptide|length=444bp MIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTAback to top mRNA from alignment at F-serratus_M_contig7713:12874..14341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7713.18967.1 ID=mRNA_F-serratus_M_contig7713.18967.1|Name=mRNA_F-serratus_M_contig7713.18967.1|organism=Fucus serratus male|type=mRNA|length=1468bp|location=Sequence derived from alignment at F-serratus_M_contig7713:12874..14341+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7713:12874..14341+ >mRNA_F-serratus_M_contig7713.18967.1 ID=mRNA_F-serratus_M_contig7713.18967.1|Name=mRNA_F-serratus_M_contig7713.18967.1|organism=Fucus serratus male|type=CDS|length=2664bp|location=Sequence derived from alignment at F-serratus_M_contig7713:12874..14341+ (Fucus serratus male)back to top |