mRNA_F-serratus_M_contig771.18966.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 137 bits (346), Expect = 4.250e-34 Identity = 75/188 (39.89%), Postives = 114/188 (60.64%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPHT 564
FT+ +WFTV FL E +AC AVL+D SVVQLF FCG+H +F+LL +FRPFAN +++ M + + LI++ SMA+LA + + T R + + A LQL+ L L++P+Y+D V++ A+ +K S S + + +E E+ F+R I+ W TWC +LG +LA + D RR +T
Sbjct: 399 FTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRRVNT 586
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 135 bits (340), Expect = 5.990e-33 Identity = 75/197 (38.07%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPHTGLRQEMPST 591
FT+SG WF L EWA L C+ L+D SV+QL FC +H +F+LL +FRPFAN V++ M + + I++V MALLA + + T + LQL LC L++PIY+D ++I A+ + + ++T + + E E E FVR+ I +W +TWC++LG + A D RE IR P T + ++ +T
Sbjct: 1180 FTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEK--EEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPGTSMAEDRLAT 1374
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 127 bits (320), Expect = 3.030e-30 Identity = 67/187 (35.83%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPH 561
+T+ GTWF V+ L EWA +A V V++D+S VQL FCG+ F++L +PFAN V++ + + + I++VS LLA ++ + T R + A LQ++ LC LV+P+Y+D V +V+ A+ + T ++Q K + ++R W TWC++L H + A RD RE +R+PH
Sbjct: 1713 YTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKT--GQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPH 1897
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.660e-28 Identity = 64/187 (34.22%), Postives = 105/187 (56.15%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPH 561
+T+ GTWF V+ L EWA +A V V++D+S VQL FCG+ F++L +PFAN V++ + + + I++V LLA ++ + T R + A LQ++ LC LV+P+Y+D V +V+ A+ ++ T E + ++R W TWC++L H + A RD R+ +R+PH
Sbjct: 1754 YTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARD---YIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPH 1937
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.930e-22 Identity = 72/226 (31.86%), Postives = 107/226 (47.35%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFE------------------WAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANK--------------------VMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPHT 564
FT+SG WF L E WA L C+ L+D SV+QL FC +H +F+LL +FRPFAN+ V++ M + + I++V MALLA + + T + A LQL C L++PIY+D ++I A+ + ++ + + E E E FVR+ I +W +TWC++LG + A D E IR P T
Sbjct: 295 FTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKV--EDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPPGT 518
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.060e-9 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANK 168
FTQ+G+WF V L EWA+LAC+AVL+D++ VQ FC IH F+LL +PFAN+
Sbjct: 332 FTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.170e-9 Identity = 55/179 (30.73%), Postives = 83/179 (46.37%), Query Frame = 1
Query: 37 LFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDTPRTQGIQGAAAFLQLLVLCVLVVPIYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPHTGLR 573
L +WA A V VL+D+S VQL FC +H F+LL +F+PFAN+ V+ +N LL A+ A T LVVP+Y+D ++ + + ++ +++ E+E F+ W TW ++G+ L A +RD RE IR P TG R
Sbjct: 538 LMKWAFFAIVGVLVDNSAVQLGLFCAMHSSTFILLVVFKPFANRQRH-----VSPVN-FGFGLLTALIRAAPSLAFTA----------------LVVPLYLDTCVSLLGVVRSRRGRVKARENEDERAERE-------FIIRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDP-TGSR 686
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 4.180e-5 Identity = 53/181 (29.28%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 46 WAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFRPFANKVMDFMASMVALINSVSMALLAAISMARKDT--PRTQGIQGAAAFLQLLVLCVLVVP---IYVDVVAVVIAALNQKCSSTRSSTRPNKKQEKENCLNEQTFVRNIIWHTWVKTWCSLLGHLLLAYMRDIRESIRRPHTGLR 573
WA A V VL+D+S VQL FC +H F+LL +F+PFAN+ + S +L +S+SM D P T G + + L++ + +P ++ ++ ++ L + R+ E+ F+ W TW ++G+ L A +RD RE IR P TG R
Sbjct: 700 WAFFAIVGVLVDNSAVQLGLFCAMHSSTFILLVVFKPFANRGLVSATSTESLDHSMSMHW-------EPDNLVPFTNGEKSE--MMTLVMSRMSTMPNETLFFCILGILGTVLPELMVGRRA---------------EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDP-TGSR 855 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig771.18966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig771.18966.1 >prot_F-serratus_M_contig771.18966.1 ID=prot_F-serratus_M_contig771.18966.1|Name=mRNA_F-serratus_M_contig771.18966.1|organism=Fucus serratus male|type=polypeptide|length=218bp FTQSGTWFTVLFLFEWAMLACVAVLLDSSVVQLFAFCGIHLGAFVLLAMFback to top mRNA from alignment at F-serratus_M_contig771:214768..216652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig771.18966.1 ID=mRNA_F-serratus_M_contig771.18966.1|Name=mRNA_F-serratus_M_contig771.18966.1|organism=Fucus serratus male|type=mRNA|length=1885bp|location=Sequence derived from alignment at F-serratus_M_contig771:214768..216652- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig771:214768..216652- >mRNA_F-serratus_M_contig771.18966.1 ID=mRNA_F-serratus_M_contig771.18966.1|Name=mRNA_F-serratus_M_contig771.18966.1|organism=Fucus serratus male|type=CDS|length=1308bp|location=Sequence derived from alignment at F-serratus_M_contig771:214768..216652- (Fucus serratus male)back to top |