mRNA_F-serratus_M_contig7701.18961.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7701.18961.1
Unique NamemRNA_F-serratus_M_contig7701.18961.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A0A6H5L9K3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9K3_9PHAE)

HSP 1 Score: 653 bits (1685), Expect = 1.880e-217
Identity = 323/385 (83.90%), Postives = 349/385 (90.65%), Query Frame = 2
Query: 1679 EAGSTPAGKERSERARAVLGRKPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLNALVS-HLRNHDGVVKISRPSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEATESVTAVTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLFC 2830
            EA  T     R+ERA+AVL RKP DWKAL+G GRNVDDMFTLG+SLSPGGGKGKPGEG+GV VRLYCDFYNSDII+ASPVALHRA VP + GE  G G VD+DFLSS+EVC++DRADVFLMQNW+YVP+IAEVLN+RP GERA+R DFSRVRPLFLHEQGR+FRQTLVFSAFQDPNLNA  S HLRNHDGVVKISRPSG+G IC+V LQ KQVFQRVPC+SLV+QDD+RFEYF GTVLPQVLRAKQSHTA+FIPSYFD+VRVRNHLMKNK S VNVHEYSR SE++RSRARFFRG+RDLLLYTGRAHFF RY IRGIHHLIFYSLPE PQFYPEMVNLLE  ESVTAVTCLSLFTRFERLSLERIVGEERA HMLASAKNTFLFC
Sbjct:  606 EADGTKRENARAERAKAVLERKPGDWKALLGEGRNVDDMFTLGISLSPGGGKGKPGEGRGVGVRLYCDFYNSDIIIASPVALHRASVPGDGGEGDGSGGVDSDFLSSVEVCILDRADVFLMQNWSYVPDIAEVLNSRPTGERASRADFSRVRPLFLHEQGRLFRQTLVFSAFQDPNLNAFASRHLRNHDGVVKISRPSGEGHICEVALQAKQVFQRVPCESLVTQDDSRFEYFVGTVLPQVLRAKQSHTAVFIPSYFDYVRVRNHLMKNKASVVNVHEYSRGSEVARSRARFFRGDRDLLLYTGRAHFFNRYCIRGIHHLIFYSLPEYPQFYPEMVNLLEEAESVTAVTCLSLFTRFERLSLERIVGEERAGHMLASAKNTFLFC 990          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: B8C934_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C934_THAPS)

HSP 1 Score: 317 bits (813), Expect = 8.290e-95
Identity = 177/400 (44.25%), Postives = 257/400 (64.25%), Query Frame = 2
Query: 1670 PWEEAGSTPAGKERSERAR--AVLGRKPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPN-LNALVSHLRNHDGVVKISRP--SGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLL--------EATESVTAVTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLFC 2830
            P +  GS     E  + AR  AVL +K ++W  L G+  + DD F +G+SL+P    G  G    V+V+L+ +FY+SD+ILASP+ L  A   +EDG+       D DFLSSI+VC++ R+DV LMQNW +V  + E LN +P   + A +DFSRVR  FL  +G  +RQ +V + F DP  L+    + +N +G +K+ R   + D  IC+VM++VKQVFQRV C ++     +R  YFA  VLP+++R KQ HT ++IPSYFDFV VRN L+K + + V+V EY+R SE+SR RARF +G +D++LYTGRAHFF R+ I+G  H+IF+ LPE  +FYP++VN+L        +   ++  ++CLSLFT+F+   LERIV     D M+   K++++FC
Sbjct:   99 PPDNEGSDKDEAETKKEARRLAVLKQKGQEWNELFGDDVSNDDDFKIGMSLTPNVTAGAAG----VSVKLFSEFYHSDVILASPIGLKLATTTNEDGDXXX-DRADVDFLSSIDVCIVARSDVLLMQNWDHVNGVLECLNQQPT--QIADIDFSRVRNYFLEGEGENWRQLIVVAKFADPYILSTFRRYGKNIEGQMKMRRKVAADDASICNVMVRVKQVFQRVVCQTVSDAGTSRLRYFADHVLPKLMRLKQKHTLIYIPSYFDFVAVRNLLLKREANFVSVTEYARISEVSRGRARFHQGRKDIMLYTGRAHFFLRHKIKGARHVIFFGLPEYAEFYPDIVNMLNDGISDLEDEDATLMPMSCLSLFTKFDAHQLERIVDSGYTDRMVKGEKSSYMFC 491          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: K0S4P7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4P7_THAOC)

HSP 1 Score: 316 bits (809), Expect = 1.240e-90
Identity = 176/394 (44.67%), Postives = 245/394 (62.18%), Query Frame = 2
Query: 1718 RARAVLGRKPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGK---------GVAVRLYCDFYNSDIILASPVALHRACVP-DEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPN-LNALVSHLRNHDGVVKISRPSG--DGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEATESVTA----------VTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLFC 2830
            R   VL +K  +W  L G+  N DD F +GL+L+P   K    + K         GV V+L+ DF++SDIILASP+ L  A    DE          +ADFLSSIE+C +  +DV LMQNW +V  + E LN +PK    A +DFSRVR  FL  +G  +RQ +V S F DP+ L+    H  + +G +K+ R +   D  +CDVM++VKQVFQRVPC S+      R  YF+ ++LP++ R KQ HT ++IPSYFDFV VRN ++K ++  V+V EY+R SE+SR RARF +G +  +LYTGRAH+F R+SI+GI HL+F+ LPE+  FYP +VN+L    S T+          ++CLSL+T+F+   LERIVG    + M+   K++FLFC
Sbjct:  431 RRNVVLRQKGPEWNELFGDDANSDDDFKIGLALTPHVAKSADKKKKKVDSGSGASGVKVKLFADFFHSDIILASPIGLKMAISGGDEXXXXXXXADTNADFLSSIEICFVSSSDVMLMQNWDHVNGVLESLNQQPKN--IADIDFSRVRNYFLEGKGANWRQLIVTSQFSDPHILSTFRRHALSIEGQLKMRRKTSVEDASVCDVMVRVKQVFQRVPCISVSEAGSNRLRYFSESILPKLTRLKQKHTLIYIPSYFDFVAVRNMMLKREMDFVSVTEYARVSEVSRGRARFLQGRKQFMLYTGRAHYFMRHSIKGIRHLVFFGLPEHAAFYPSVVNMLNDGMSETSTEDDDATRLPLSCLSLYTKFDAHQLERIVGASHTERMIKGDKSSFLFC 822          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A0A835YMJ8_9STRA (Digestive organ expansion factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ8_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.790e-90
Identity = 158/302 (52.32%), Postives = 209/302 (69.21%), Query Frame = 2
Query: 1979 DADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLNALV-SHLRNHDGVVKISRPSGDGRICDVMLQVKQVFQRVPC---DSLVSQDDARFEYFAGTVLPQVLRAKQS---HTALFIPSYFDFVRVRNHLMKNK------------VSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEATESVTAVTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLF 2827
            D+DFLSSIEVC++D ADV LMQNW +V    + LN +PK +R    DFSRV P   H QGR++RQT+V SA  DP + AL     RN  G V+++R  GDG IC+V+ +V+QVFQR+PC   +   +QDDARF +F GTVLP +L A+ +   HTA+F+PSY+D+VRVRN L++ +             SAV V EYSR SEI+RSRA FF+G + LL+YTGRAH+F R+ +RGI HL+ Y LP  PQFYPE+VNL++  +     +CL+LFT  E+L+L+R+VG ERA  ML+  K TFLF
Sbjct:    2 DSDFLSSIEVCIVDGADVMLMQNWEHVVTTLDKLNAQPKRDRGT--DFSRVWPHLTHGQGRLWRQTVVLSAVADPAIAALTRDQCRNRAGAVRLTRVPGDGSICEVVTRVRQVFQRIPCGLREDPAAQDDARFNHFVGTVLPALLSAQHTYTPHTAVFVPSYYDYVRVRNELLRREQQSTGGALAVGAASAVFVCEYSRPSEIARSRAWFFQGRKPLLVYTGRAHYFNRFRVRGIRHLVLYGLPVQPQFYPELVNLIDEGDGDAPPSCLALFTPLEKLALQRVVGAERAKRMLSGEKQTFLF 301          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A0A7S3Q3B7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3B7_9STRA)

HSP 1 Score: 300 bits (767), Expect = 2.290e-89
Identity = 168/388 (43.30%), Postives = 244/388 (62.89%), Query Frame = 2
Query: 1715 ERARAVLGRKPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLNALVS-HLRNHDGVVKISR--PSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKN---KVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEAT----------ESVTAVTCLSLFTRFERLSLERIVGEERADHMLASA-KNTFLF 2827
            +R +AV   K +DW  L G+  N DD F +G++      K K        ++ Y ++Y+SDII+ASP+ L  A   ++D E  G    D DFLSS+E+ +  +ADV +MQNW ++  +   LN +PK  +   +DF+RVR   L  Q   +RQT+  S F DP++ A  + H ++  G VKI R  PS +  ICDVM++++Q+FQR+ CDS+ +Q D+R +YF   +LP++L +KQ HT ++IPSYFDFV +RN LMKN   +   V+V EY+R SE+SR RARF +G + ++LYTGRAHFF R+ I+G  HLI Y LPE+ +FYP ++N+L             ES + VTCL+LFT++E   LERIVG + ++ ML +  K  FLF
Sbjct:   24 QRRKAVQKEKGKDWLELFGDDVNPDDDFKIGIAFQNTKNKRK--------LKFYSNYYHSDIIIASPLGLKVATTNEDDEEDVG----DVDFLSSVEIVLAHQADVMIMQNWDHMASVMSCLNQQPK--KGTGIDFARVRNYLLSGQAAKWRQTIFVSRFSDPHIIAAFNRHTQSIAGRVKIRRKVPSDEASICDVMIKMRQIFQRISCDSIATQGDSRLKYFKDKILPELLSSKQKHTLIYIPSYFDFVALRNLLMKNDRAQYHFVSVTEYARVSEVSRGRARFLQGRKRIMLYTGRAHFFMRHHIKGAKHLINYGLPEHAEFYPGLLNMLTQNVGGDSEDALLESESPVTCLNLFTKYEAQCLERIVGSKHSERMLKNENKKVFLF 397          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: W7TJK6_9STRA (Digestive organ expansion factor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJK6_9STRA)

HSP 1 Score: 313 bits (803), Expect = 8.240e-88
Identity = 187/393 (47.58%), Postives = 238/393 (60.56%), Query Frame = 2
Query: 1742 KPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLNALV-------------------------SHLRNHDGVVKISRPSGDGR-ICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLE-ATES--VTAVT-CLSLFTRFERLSLERIVGEERADHMLASAKNTFLFC 2830
            +P DW  L     N DD F +G++L+PG GK       GVAV+L+ DF+ SD+I+ASP+ L R  +  +DGE        ADFLSS+E+  +  ADV LMQNW +V E+   LN  P+       DFSRVR   L  Q   FRQ+L +S F DP L A V                         S   N  G+V++ R    G  IC V L +KQVFQR+PC     Q D+R ++    ++P++ R +Q  T +FIPSY+DFVR+RN+ +K ++S V + EY R SE SRSRARFF G+RD +LYTGRAH+F+R+ IRG  HLI YSLPEN QFYPE+VNLLE  T S  V  VT C SLFT++E L+LERIVG  RA HML S K TFLFC
Sbjct:  714 RPMDWLELFDG--NCDDDFRVGIALTPGAGKXXXXX-XGVAVKLFSDFFQSDMIVASPLGL-RLAIEAQDGE--------ADFLSSVEILCVGHADVMLMQNWDHVSEVLRHLNHAPRQNH--NTDFSRVRDFVLEGQAGRFRQSLFWSRFVDPMLMAAVKGRPTSSGHKDQSSQTPIGVGNGRTSRQTNFRGLVRLKRVVEHGASICRVALPIKQVFQRIPCAQPRLQGDSRLDFMVRKIIPELRRLQQGRTLVFIPSYYDFVRLRNYAVKEELSHVCISEYERTSETSRSRARFFHGQRDFMLYTGRAHYFKRFMIRGARHLILYSLPENAQFYPELVNLLEEGTRSGEVGGVTSCFSLFTKYEALALERIVGSTRARHMLGSEKETFLFC 1092          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: B5Y4I3_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4I3_PHATC)

HSP 1 Score: 293 bits (749), Expect = 1.580e-85
Identity = 166/373 (44.50%), Postives = 226/373 (60.59%), Query Frame = 2
Query: 1742 KPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPN-LNALVSHLRNHDGVVKISR--PSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLL-EATESVTAV-------TCLSLFTRFERLSLERIVGEERADHMLASAKNTFLF 2827
            K  DW  L G   N DD F LGLSL P     K        ++LY DFY SDII+ASP+ L  +  P+   E+      DADFLSSIE+C++ R+DV LMQNW +V ++  +LN +PK  +    DFSRVRP  L  Q   +RQ ++ S F DP  L+       N  G V+I R  P+ +  +  V+L V+QVFQRV C ++ +Q   R  YF  +VLPQ+ R KQ HT +FIPSYFDF+ +RN L+K +V  V+V EY+R SE+SR RARF +G + ++LYTGRAH+F R+ I+GI HLIF  +PE   FY + VNLL E  E    +       +CL L+T+++  +LERIVG      M+   K++F+F
Sbjct:  127 KGSDWHELFGETANDDDDFKLGLSLHPKRRNKKSVTESTCDIKLYSDFYKSDIIVASPLGLKISVTPESISETSDN---DADFLSSIEMCIVHRSDVLLMQNWDHVMDLLPLLNQQPK--KTNDTDFSRVRPYLLAGQAAQWRQLIMTSQFLDPLILSTFKRFSENRQGQVRIRRKTPAEEANVTSVLLPVRQVFQRVSCSTIANQGADRVRYFVDSVLPQIQRHKQHHTMIFIPSYFDFISLRNILLKKEVEFVSVTEYARTSEVSRGRARFLQGRKPIMLYTGRAHYFLRHQIKGIRHLIFLGVPEEASFYADHVNLLNEGLEKRDDIIMDDGLASCLVLYTKYDSYALERIVGTANCSRMVRGEKSSFIF 494          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A0A7S2A0D8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0D8_TRICV)

HSP 1 Score: 275 bits (704), Expect = 3.980e-81
Identity = 153/336 (45.54%), Postives = 211/336 (62.80%), Query Frame = 2
Query: 1826 GGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTV----DADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPN-LNALVSHLRNHDGVVKISR--PSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLE------------ATESVTAVTCLSLFTRFERLSLERIVG 2776
            G KG  G G G ++RLY DFY SD++LASP+ L  A     D + GGG       D D+LSS+E+C++ RADV LMQNW +V  +  VLN +P        DFSRVR   L  Q   +RQ +V S F DP  LN+   H  +  G  ++ R  PS D  ICDV+++ +QVF+RVPC+S+ SQ +    YF   VLP++L  +Q  T +F+PSYFDFV VRN L++ + S V+V EY+R SE+SR RARF +G + ++LYTGRAH+F R+ I+G+ HLI + LPE P+FYP+++N L               ++  + +CL+LFTR+E   LERIVG
Sbjct:    3 GKKGAAGRG-GASMRLYSDFYRSDVVLASPLGLKMAA----DNDGGGGXXXXXGGDFDYLSSVEICLVGRADVLLMQNWDHVNSVLNVLNRQPSKNNDT--DFSRVRNYLLAGQASHWRQLIVCSKFADPYVLNSFKRHGTSLGGQTRVRRRVPSDDASICDVLVKARQVFKRVPCESVASQGETVLRYFKDQVLPRILTNRQDRTMIFLPSYFDFVAVRNLLLEKEASFVSVTEYARVSEVSRGRARFLQGRKRIMLYTGRAHYFLRHRIKGVRHLILFGLPECPEFYPDLMNALGDGLGPKGGGGGGVLDAEASASCLALFTRYEARCLERIVG 331          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A5ALV2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5ALV2_VITVI)

HSP 1 Score: 274 bits (701), Expect = 7.650e-80
Identity = 153/364 (42.03%), Postives = 222/364 (60.99%), Query Frame = 2
Query: 1742 KPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLNALVSH-LRNHDGVVKISRPSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEATESVTAVTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLFC 2830
            KP D++AL G   N +D F +G+  +               ++LY DFY+SD+I+ASP+ L         GE+      D D+LSSIEV V+D ADV  MQNW++V  + E LN  P  +     D  R+R  +L    + +RQT++  ++ +P++NA  +H   N+ G VK+      G +  V+LQV+Q+++R   DS+V  DDARFEYF   V P++  + Q    LF+ SYF++VR+RN L     S   + EY+++S+ISR+R  FF G+R ++LYT RAHF+ RY IRGI +LI YSLPE  +FYPE+VN+LE + ++T   C  LF+RF++  LERIVG   A  M+AS KN F+FC
Sbjct:   63 KPSDFQALFG--ANNNDHFMIGIKFTRR------------TIKLYSDFYSSDMIIASPLGLITKI-----GEAEVEKEKDVDYLSSIEVLVIDHADVISMQNWSHVNSVVEQLNRIPSKQHGT--DIMRIRQWYLDGHAQFYRQTIILGSYLNPDMNASFNHHCVNYQGKVKLVCEY-KGALAKVLLQVRQIYERFDADSVVDSDDARFEYFTTKVFPKIKDSIQGGIMLFVSSYFEYVRIRNFLKSQNASFCLLGEYTKQSDISRARVWFFEGKRKIMLYTERAHFYHRYKIRGIQNLIIYSLPERKEFYPEIVNMLEGSHNMT---CTVLFSRFDQFRLERIVGSGPAKRMVASEKNVFVFC 401          
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Match: A0A0S7HYA3_9TELE (U3 small nucleolar RNA-associated protein 25 homolog n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HYA3_9TELE)

HSP 1 Score: 279 bits (713), Expect = 1.530e-79
Identity = 162/366 (44.26%), Postives = 224/366 (61.20%), Query Frame = 2
Query: 1739 RKPEDWKALMGNGRNVDDMFTLGLSLSPGGGKGKPGEGKGVAVRLYCDFYNSDIILASPVALHRACVPDEDGESGGGGTVDADFLSSIEVCVMDRADVFLMQNWAYVPEIAEVLNTRPKGERAARVDFSRVRPLFLHEQGRIFRQTLVFSAFQDPNLN-ALVSHLRNHDGVVKISRPSGDGRICDVMLQVKQVFQRVPCDSLVSQDDARFEYFAGTVLPQVLRAKQSHTALFIPSYFDFVRVRNHLMKNKVSAVNVHEYSRKSEISRSRARFFRGERDLLLYTGRAHFFRRYSIRGIHHLIFYSLPENPQFYPEMVNLLEA--TESVTAVTCLSLFTRFERLSLERIVGEERADHMLASAKNTFLF 2827
            R+P+D+ A+     NVDD F +G+S+  G             +RLY  FY+SDII+ASP+ L    V   +GES      D DFLSSIE+ V+D+ DVFLMQNW +V  + + +N +P       VDFSRVR   L+   R +RQTLVFS+ QDP +N  L  H  N+ G + I      G IC V++Q+  VFQ    DS ++QD  RF++F   VLPQ   +  SHT ++IPSYFD+VR+RNH+ K +++  +V EYS KSE+SR+R  F +GE+  LL+T R HF++RY+I+GI +LIFY LP  P FY E+ N+L A       + TC +L++R++   L  I G +RA  ML S KN  LF
Sbjct:  219 RRPDDYHAVFSG--NVDDHFRIGVSIVRGN------------MRLYAPFYSSDIIIASPLGLRT--VLGAEGESKR----DYDFLSSIELLVLDQTDVFLMQNWEHVLHVMKHMNLQPLDSHG--VDFSRVRMWNLNNWARHYRQTLVFSSIQDPQINNILTKHCANYRGQITIKNMPKTGSICQVLVQLPHVFQMFSSDSFMNQD-TRFQFFIDKVLPQYKDSVMSHTLIYIPSYFDYVRLRNHMKKEEINFTSVCEYSSKSEVSRARHFFLKGEKQFLLFTERFHFYKRYAIKGIKNLIFYGLPTFPHFYSEVCNMLAAGGQGEEASWTCTALYSRYDAHKLAAITGAQRAGQMLHSNKNVHLF 561          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7701.18961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9K3_9PHAE1.880e-21783.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
B8C934_THAPS8.290e-9544.25Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
K0S4P7_THAOC1.240e-9044.67Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YMJ8_9STRA2.790e-9052.32Digestive organ expansion factor (Fragment) n=1 Ta... [more]
A0A7S3Q3B7_9STRA2.290e-8943.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7TJK6_9STRA8.240e-8847.58Digestive organ expansion factor n=2 Tax=Monodopsi... [more]
B5Y4I3_PHATC1.580e-8544.50Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7S2A0D8_TRICV3.980e-8145.54Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A5ALV2_VITVI7.650e-8042.03Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A0S7HYA3_9TELE1.530e-7944.26U3 small nucleolar RNA-associated protein 25 homol... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7701contigF-serratus_M_contig7701:745..7736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue5.5e-96
Seed eggNOG ortholog2880.D8LQM2
Preferred nameDIEXF
KEGG koko:K14774
Hectar predicted targeting categoryother localisation
GOsGO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009611,GO:0009653,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022613,GO:0030163,GO:0030490,GO:0030515,GO:0030684,GO:0031016,GO:0031017,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034511,GO:0034641,GO:0034660,GO:0035239,GO:0035265,GO:0035272,GO:0035295,GO:0040007,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048483,GO:0048485,GO:0048513,GO:0048546,GO:0048565,GO:0048589,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055123,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090594,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1990904
EggNOG free text desc.U3 snoRNA binding
EggNOG OGsKOG2340@1,KOG2340@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons6
Model size2830
Cds size1749
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932304.3498533-CDS-F-serratus_M_contig7701:744..9031622932304.3498533-CDS-F-serratus_M_contig7701:744..903Fucus serratus maleCDSF-serratus_M_contig7701 745..903 +
1690964243.8309183-CDS-F-serratus_M_contig7701:744..9031690964243.8309183-CDS-F-serratus_M_contig7701:744..903Fucus serratus maleCDSF-serratus_M_contig7701 745..903 +
1622932304.3755765-CDS-F-serratus_M_contig7701:3554..51441622932304.3755765-CDS-F-serratus_M_contig7701:3554..5144Fucus serratus maleCDSF-serratus_M_contig7701 3555..5144 +
1690964243.8456545-CDS-F-serratus_M_contig7701:3554..51441690964243.8456545-CDS-F-serratus_M_contig7701:3554..5144Fucus serratus maleCDSF-serratus_M_contig7701 3555..5144 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932304.3973467-UTR-F-serratus_M_contig7701:5144..55921622932304.3973467-UTR-F-serratus_M_contig7701:5144..5592Fucus serratus maleUTRF-serratus_M_contig7701 5145..5592 +
1690964243.8572931-UTR-F-serratus_M_contig7701:5144..55921690964243.8572931-UTR-F-serratus_M_contig7701:5144..5592Fucus serratus maleUTRF-serratus_M_contig7701 5145..5592 +
1622932304.420046-UTR-F-serratus_M_contig7701:5951..60651622932304.420046-UTR-F-serratus_M_contig7701:5951..6065Fucus serratus maleUTRF-serratus_M_contig7701 5952..6065 +
1690964243.8685641-UTR-F-serratus_M_contig7701:5951..60651690964243.8685641-UTR-F-serratus_M_contig7701:5951..6065Fucus serratus maleUTRF-serratus_M_contig7701 5952..6065 +
1622932304.4419525-UTR-F-serratus_M_contig7701:6373..65891622932304.4419525-UTR-F-serratus_M_contig7701:6373..6589Fucus serratus maleUTRF-serratus_M_contig7701 6374..6589 +
1690964243.878895-UTR-F-serratus_M_contig7701:6373..65891690964243.878895-UTR-F-serratus_M_contig7701:6373..6589Fucus serratus maleUTRF-serratus_M_contig7701 6374..6589 +
1622932304.4681873-UTR-F-serratus_M_contig7701:6964..71361622932304.4681873-UTR-F-serratus_M_contig7701:6964..7136Fucus serratus maleUTRF-serratus_M_contig7701 6965..7136 +
1690964243.8964384-UTR-F-serratus_M_contig7701:6964..71361690964243.8964384-UTR-F-serratus_M_contig7701:6964..7136Fucus serratus maleUTRF-serratus_M_contig7701 6965..7136 +
1622932304.4916139-UTR-F-serratus_M_contig7701:7605..77361622932304.4916139-UTR-F-serratus_M_contig7701:7605..7736Fucus serratus maleUTRF-serratus_M_contig7701 7606..7736 +
1690964243.9093673-UTR-F-serratus_M_contig7701:7605..77361690964243.9093673-UTR-F-serratus_M_contig7701:7605..7736Fucus serratus maleUTRF-serratus_M_contig7701 7606..7736 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7701.18961.1prot_F-serratus_M_contig7701.18961.1Fucus serratus malepolypeptideF-serratus_M_contig7701 745..5144 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7701.18961.1

>prot_F-serratus_M_contig7701.18961.1 ID=prot_F-serratus_M_contig7701.18961.1|Name=mRNA_F-serratus_M_contig7701.18961.1|organism=Fucus serratus male|type=polypeptide|length=583bp
MGNRGKKSKGKSGKKGKGKKGSRSSGASKWGDEGIAQRDDDGQPIKKRRR
VTQEAQDRGRRMKMMELTLTKQREQVNRLSQPNRELVVAVPAKPKPRRRK
RPRNNSKDPVRTRSSSDMAHYSSSDDDDGNRDGGGFATGLASYKELLSSL
EHANAAEISAAGEGDEDLASAVASRRMQREGLEGYGSESQTEEEEDGEED
RDNGVGRADDLEEEAGEELGGEDLIANGDDGVQAEGDGGDPGASSVGSGS
EDDTETDDVDRHQDLAGHDDSSGDESKAVVRSKDEFGRHFVATPVFTAEQ
ATEKLSASGRPSFKPLSGSHKGKYGAVGLSAAVSRNAEVPSPLPPGGSVA
GDLGVLPSLAVVWDECIGGETTALQSLLLPSLTGYRDMLYCGWRDEDALD
IRRCYALHALNHALTSRRRVVRHNARLRKAAEVAKVAEAIARGAGEKETI
NGESGHGFRQKHGDTRAAKVTVAEGSAKKSPGVSVEGAATVPAVDTESDE
WQRDQGFTRPKVLILLPFRDVAHELLEIMIELLGPKTVVINKDRFDEEYG
PENEDDALGGSRQYAGGEGEVRACKGGLGAKA*
back to top

mRNA from alignment at F-serratus_M_contig7701:745..7736+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7701.18961.1 ID=mRNA_F-serratus_M_contig7701.18961.1|Name=mRNA_F-serratus_M_contig7701.18961.1|organism=Fucus serratus male|type=mRNA|length=6992bp|location=Sequence derived from alignment at F-serratus_M_contig7701:745..7736+ (Fucus serratus male)
ATGGGTAATCGCGGGAAAAAGTCCAAGGGTAAATCAGGGAAAAAAGGAAA GGGCAAGAAGGGCAGCCGCAGTAGTGGTGCTTCTAAGTGGGGTGACGAGG GAATCGCCCAGCGAGACGATGACGGTCAGCCGATCAAGAAGAGGCGACGC GTCACACAGGTCAGCGAGTCTTCTGCTATAGCAGCCGTCGGCTAGGTATA GACTCGAAGGAGTCGAAACAAATCAGTTAAAGTCGCTTCATAGGTGTGCG TGCGTCTTGTCCGCCAGCAGCATTGCGTATCCTAAACAGTATTATAGTAT AGTTACAGGCCTCGAAGATGTGCGGCTATGGGGTTCTCTTAGATTATTAC TGCTGTATTTAATTTTCTACTTTACAGTAGTGAATATCCACTCCAACCGT CAAATATCAACACAGCTACAGCACGGTAGACACAGCTcCAACCATCAATA GGTACAGACAACACTCTTTCTAGTTGCAGAACCTCTCCACGAACATGCGC ACTAAACGTTATTCCTCCTGCATACTGCAGTACGTCAACTGCTTCACAAT TTGTGCTTGACTATACTCGCGTCCTATTACGTACCTGGTACCGTACTGGG TATCATCTGGCGCGAGACCGCTGACTGTTTTTTCACAGACTTATGTATGG TCATCGCATATTATATATAGCAGGGTATGAACCAACCGGGTAAGATTACC AATCCTGCTCTACTCGTGGTCACCTGAACATGGAAAATGTATTTCCCTGT CCCTGTTCGCGCCAGAGAATTTGCTCTCGCGAGACGGGCAGGGCCGTCCC GTCCCGCGTCAGCCTCCTCGTTCTCTATAATCAGGTTAAATCTGGTGCTA GTGCTTTGAAAAAAGCAAAATAAAACTTTTTTTTTTTTTGAAGAAAAACC AGAACGCGCCTATACCTTCTGGGCTTGTTGTTTCTTACATACAGCGTATT GGTTGCCAACCCGAAAAAGCTATACTGGTACTATACTCTACACAGTGACC AAAGAGATCAAGAAGAGAAGGTCTATTAATAGCAACGCCTCCCCCCTCCA GGCTGCCATGATATCAATATAATAGTACTGTACGGCAGAAATCATCTGTA ATAATTAAAAATAAACACAGGGCACGTACAACAAAGCTCGTGCTGGTTCG CTCGCCCTTGTTGACTAGCCCCAAGTGGCGCGAACTGGTATCCTCCAGAC GTTCTGTTTGTAGATGCCATGACGTTTTTTCTCTGGTGTTACGTTCGTTT TGCTTTGTTTTGCTTTGTTTTGCTTCGTTTTTGTCTCTATACTTTCGTTG AAGCCGCAGCCCTTCGTTCAATCGTCCTTCGAATGCAGGCGCCCCGGTAG CCACACGTGTTTCTATTTTTGGAGATGTCGCTTTTTTCGAGTATTTCTTG TACCATTTCCGCTTCTCTTTGTATGGAGAGTACGTCGTACGTTCTTTCCT TCCGAATGGTGTTTTCTACCTTGTGACCACGGGCTGGGTTTTTTGACATC AGCTTATGTGAGAATTCAATCAATCAATCAACAAAGATAGGTTAGCTATC GCTATACGCTCGCTAAAGGATAGTTGTGTAACTATCGTCAGCTCAATACA GGTGTTGGTGTAATGTATGGTTGGTGTTTGGCGTGTTGTACTGGCGTCGT CCTCAACACTGTACGGGAAAGTACCACGCCTGATTCTTAATAAAAGAAGC CGGCTAACGCAGCAGGTAGTCGTCTTTTCTCGAAGGGATTTTCTATGCGG CGCATTGTTGTGTAATTGTTCATCGGCGGAGCGTGAAGGTCTATCTACAC ATGTACAGCGGGAATGTTCAGCATAACCCTATGCGCAGCATCCTGTCACT AAGAATCTTCACATCTCTCCCCGATTTATCGCGATGCAAATTCATCTACC TGCGTTTGGATCAACATCCAACACTATAATATGGTGTGGTATCAAACACC AGTAGTGCAACATCAAGAACGTCGCTGCTTGATCCATAGAGCGCGTGGGC GATGCGTCTGTGCTTCGTGTACACAACAGTCAAACCCAGAAACTGCATTG GATCAACAGTCAATTATATTTTGATGCGGGACGGGACTGCCGAATTCGTC TCGCGAGACGAAATTCTCAGGCGCGAACGGGGACAGAGAAATTTTCACTT TCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCC ATACTCTTGCTATACGTGATGACCATACATACATACATACTAACTGTACA CTTATGTATAGCAGTAGGTCTGCGTACCTTGCCCGTTTTGCACACAAGTC GCCAAAATTTCTAAAGAACTTCCGCATGTAAGCAGAATGTTTATTGGTCA GCACGAAAGCGAGATCCCGAACTCGCATTTTGATTGGTCAATGTGCACAG TCTTTGATACACCCGAGCCCCAAATTGATGCACCTTCCAGATTAGAAGCT CACTACGCTCGCAAAAATAACATATGACCAGAAAGGGCATCACGTGACGC ATCTACGAACCTAGGCGTCATTGGAGCCATATCCCTAATAAAATACAAAA TACGAGTATATCCCGACGAACGTGTGGGAGCCACCTTGGGAAAAAACAAA AGATTAAAGAGAAAAAAAGAATTACAAAAGATTTAGCTCTTCCTCGTAGG ATACGCTGATGAACTTTAATGTTTCGCTTGACTTTCAAGGAATTATGGAG CGATTGACTACGTATGGAATCCCGCTAGCCACGTGTTAATAATTACCTGG TACTTCAGTAAAAGCACAAATTTCAACTTCGATATATTGGTGTTGATTTT GTGCCATCAGGAGGCCCAGGACCGCGGACGACGAATGAAGATGATGGAAC TCACCCTGACGAAGCAGCGAGAGCAGGTCAATCGCCTCAGCCAGCCCAAC CGTGAGCTGGTCGTGGCTGTTCCGGCAAAACCCAAGCCCAGGAGACGGAA GAGGCCTCGCAACAACAGCAAGGACCCCGTGCGAACCCGTAGCAGCAGTG ATATGGCGCACTACAGCAGCAGCGACGATGATGATGGAAACCGAGACGGT GGGGGCTTCGCCACGGGCCTCGCGAGCTACAAAGAGCTGCTTTCGTCTCT GGAGCACGCGAACGCGGCGGAGATCTCCGCGGCAGGAGAAGGCGACGAGG ATCTCGCCTCCGCCGTTGCCTCCAGGCGCATGCAGAGGGAGGGCCTCGAG GGCTACGGGAGTGAGAGTCAAACTGAAGAGGAAGAGGATGGCGAGGAGGA CCGTGATAATGGAGTCGGAAGAGCAGACGATCTGGAGGAAGAAGCGGGTG AAGAGCTAGGCGGGGAGGACCTCATAGCCAACGGCGATGACGGCGTTCAA GCAGAGGGAGATGGTGGTGATCCCGGAGCATCCAGCGTGGGTTCAGGAAG CGAAGACGACACCGAGACGGACGACGTAGACCGCCATCAAGACTTAGCGG GTCATGACGATAGCTCGGGCGATGAGAGCAAGGCAGTCGTCCGAAGCAAA GACGAGTTTGGCCGTCACTTCGTGGCCACCCCTGTGTTCACCGCAGAACA GGCGACAGAAAAGCTTTCTGCTTCCGGGCGCCCTTCCTTCAAGCCCTTGT CCGGGTCCCACAAGGGCAAATATGGTGCCGTAGGTCTTTCTGCCGCGGTA TCTAGAAACGCCGAGGTTCCTTCTCCATTGCCTCCGGGAGGGAGCGTTGC CGGAGATCTCGGGGTTTTGCCGAGTCTCGCGGTGGTATGGGACGAGTGCA TAGGTGGTGAGACGACGGCGCTACAGTCTCTCCTCCTACCGTCGCTGACA GGCTACCGAGACATGCTTTACTGCGGCTGGCGCGACGAGGACGCGTTGGA CATCAGGCGGTGCTACGCGCTCCACGCGCTGAACCACGCACTGACATCGC GGCGCAGAGTCGTGCGGCACAACGCGCGTCTGCGTAAGGCGGCCGAAGTA GCCAAGGTGGCCGAGGCGATCGCTCGGGGGGCAGGGGAGAAAGAGACCAT AAACGGCGAGAGCGGACATGGGTTTCGACAAAAACATGGCGATACCCGGG CAGCAAAGGTAACTGTGGCGGAAGGGAGCGCGAAAAAATCGCCAGGTGTA AGTGTGGAAGGTGCCGCGACAGTTCCAGCTGTCGACACAGAGTCGGACGA GTGGCAGCGCGATCAGGGCTTCACCCGCCCTAAGGTTCTCATCCTGCTGC CGTTCCGAGACGTGGCGCACGAGCTGCTGGAGATCATGATCGAGCTGCTG GGACCAAAAACAGTCGTCATCAACAAGGACCGCTTCGACGAGGAATACGG TCCAGAGAATGAGGATGATGCCTTGGGAGGAAGCCGGCAGTACGCCGGCG GGGAAGGAGAGGTCAGAGCGTGCAAGGGCGGTCTTGGGGCGAAAGCCTGA GGACTGGAAGGCATTAATGGGGAATGGACGGAACGTGGACGACATGTTTA CCCTCGGGCTGTCGCTCTCGCCCGGAGGCGGCAAGGGAAAGCCCGGCGAG GGCAAGGGCGTCGCTGTTCGCCTCTACTGTGACTTCTACAACAGTGACAT CATCCTCGCTTCCCCGGTGGCGCTGCACCGCGCTTGCGTGCCCGATGAAG ACGGAGAGAGCGGGGGTGGCGGTACGGTCGATGCCGACTTCTTGTCGAGC ATAGAAGTCTGCGTCATGGACAGGGCGGACGTGTTCCTCATGCAAAATTG GGCCTACGTGCCGGAAATCGCGGAGGTCCTCAACACGCGTCCAAAGGGAG AGCGGGCCGCCAGGGTAGACTTCTCGCGGGTGCGGCCGTTGTTCCTGCAC GAGCAGGGGAGGATTTTCCGGCAGACCCTGGTCTTCAGCGCGTTCCAGGT GGGGTGTGTTGTGTGTGTGTGTGTTGTCATCCCATTTTTTCTGGACGTCA GACTTGTGGACGCACCACCGGGATCACACAGGAGAAAGGTCTCAAGTGAT TTCTCCTTCCTTTTGCGGTGCTTGTCGCATTTCTCGTCTTTCTTCGAGCT TAACGATGTACCGGTACAACTTTTGTTTGTTTTTTCCTGTTGCTCGCCGG TTGTGTTTCGTCCAGGACCCTGGTTTCCAGAAATACAGCGACTGCGGGTG ACGATACCGCATCAAACAATTGCTATCAATACATTAGTACATAAAGTTAC CATTGTGCAGTAAAGCCGATACCTTATATCCATTGTCGATCGTCTTGGAA CATGCAGGACCCCAACCTGAACGCCTTGGTGTCGCACTTGCGGAATCATG ACGGCGTCGTGAAGATATCTCGTCCCAGCGGAGACGGACGAATCTGTGAC GTGATGCTGCAAGTCAAGCAGGTTCGTCTTGCTCCCTTGCTTGGCCAATA AGACGCTCCCGACTCGTGAGCACAGTTTTCAGCGACGTTCGTCATAAAAC CCATGTTGGCCAGGCCTTTAGGCGGCCGCGATTGACAATCTGGGGAGCTT TGTATTGCGAGGGCGGGGGGCGGCCTCAGCGAGGCATCTTATCTCATCAT CTCTCTCGCCGTCTCCACCCGTTTCAGTGGCCGGAACATTCCTCAGAGGT TAAACTCCCCTCGGATTGCTTCCGCCCTCGACACGTCGAGCTCAATGTTC AATGTCTTATCTTTCTCTACGCCTGCCAGGTGTTTCAACGAGTCCCGTGC GACTCTCTGGTGTCCCAGGATGACGCGCGCTTCGAGTACTTCGCTGGGAC GGTGTTGCCCCAGGTGCTGAGGGCGAAACAGTCCCACACGGCCTTGTTCA TCCCGTCATACTTCGACTTTGTCCGAGTGAGGAATCATCTCATGAAGAAC AAGGTTAGCGCGGTGAACGTGCACGAGTACTCTCGGAAATCAGAGGTGAG CGACACGGACCGCTCGGAGCTTTATTATTTAAGGAGGCGGTACTCTGCCG GCACTTGGAAGGAGAATGGTAGGGGTTGACCACGAAACGCCGCACTCCGT TCGCTCAAGACACGGATCGCGCGTTTGTTCTGATAAATTACCTCCGGGTC TCCGAGTGATTGATAGCCTGAAACGGAGATAAAATGCAGGAATCGCTAGG CCTGGTTATAATAACACACACACATGAACAATCCATTCTCCAAGAAGTGT GTTTTTTCGCTCAGTACGTTCGTTATGGCCCAGGGCACCTATGGAGGGAT CGCCGTCTCCTGAAATGTACAAATCAATTGAAACAGTCAGATTCGAATTA TCTGTCCATCCTTGATGCAGATCTCGAGATCACGAGCGAGGTTTTTCCGA GGAGAGCGAGACTTGCTGCTCTACACAGGGCGCGCCCATTTCTTCCGCCG ATACAGCATCCGTGGCATCCATCACCTGATCTTCTACTCTCTCCCCGAGA ACCCGCAGTTCTATCCCGAAATGGTGAACCTGCTCGAGGCAAGTCCGCAT AACGTTGTTTTGTCTCATGTTTGTGCCTGCTGCATCCATCCATCCATGGA TGTATCAAGCAAAGCGTCTCCCCTGGAGCCCTGGGCAACGTCCAAGCTTC ACTGAACTTAAGCTGTAGTTGGAGATAAAGTTTGTGGCGCTACTTCAATG CCGGGGTGTAAGGTTTTTTTTTAAATATTATTTTCCGCTACATCAACCTC CGGACGGTGGATCGGGTACTGATATACCTTTTACACGCACTTCACTTGCC TTCACCTTTTATTTACCCTCCGTGATGTGCCCAGTCTCTTTATTATACGA ACGACGCTCTCACGTTTACCTTATATTTACCCTCCGTGATGTACCCCGCC TCTTGAGTCACTTCCAATACTTCTTGTCAAATTTCCCAAAGCATAACAAT TATCCGAAGCCAGTCACACCATTCCACTCCCTCGTGGTCCCGGCCCTATC ACCGCAGGAAGCTGAATCTGTTACGGCGGTTACCTGCCTTTCCCTTTTCA CGCGGTTCGAGCGCCTCAGCTTGGAGAGAATCGTTGGGGAGGAGCGCGCC GATCATATGCTAGCCTCGGCCAAGAACACTTTTCTCTTTTGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7701:745..7736+

>mRNA_F-serratus_M_contig7701.18961.1 ID=mRNA_F-serratus_M_contig7701.18961.1|Name=mRNA_F-serratus_M_contig7701.18961.1|organism=Fucus serratus male|type=CDS|length=3498bp|location=Sequence derived from alignment at F-serratus_M_contig7701:745..7736+ (Fucus serratus male)
ATGGGTAATCGCGGGAAAAAGTCCAAGGGTAAATCAGGGAAAAAAGGAAA
GGGCAAGAAGGGCAGCCGCAGTAGTGGTGCTTCTAAGTGGGGTGACGAGG
GAATCGCCCAGCGAGACGATGACGGTCAGCCGATCAAGAAGAGGCGACGC
GTCACACAGATGGGTAATCGCGGGAAAAAGTCCAAGGGTAAATCAGGGAA
AAAAGGAAAGGGCAAGAAGGGCAGCCGCAGTAGTGGTGCTTCTAAGTGGG
GTGACGAGGGAATCGCCCAGCGAGACGATGACGGTCAGCCGATCAAGAAG
AGGCGACGCGTCACACAGGAGGCCCAGGACCGCGGACGACGAATGAAGAT
GATGGAACTCACCCTGACGAAGCAGCGAGAGCAGGTCAATCGCCTCAGCC
AGCCCAACCGTGAGCTGGTCGTGGCTGTTCCGGCAAAACCCAAGCCCAGG
AGACGGAAGAGGCCTCGCAACAACAGCAAGGACCCCGTGCGAACCCGTAG
CAGCAGTGATATGGCGCACTACAGCAGCAGCGACGATGATGATGGAAACC
GAGACGGTGGGGGCTTCGCCACGGGCCTCGCGAGCTACAAAGAGCTGCTT
TCGTCTCTGGAGCACGCGAACGCGGCGGAGATCTCCGCGGCAGGAGAAGG
CGACGAGGATCTCGCCTCCGCCGTTGCCTCCAGGCGCATGCAGAGGGAGG
GCCTCGAGGGCTACGGGAGTGAGAGTCAAACTGAAGAGGAAGAGGATGGC
GAGGAGGACCGTGATAATGGAGTCGGAAGAGCAGACGATCTGGAGGAAGA
AGCGGGTGAAGAGCTAGGCGGGGAGGACCTCATAGCCAACGGCGATGACG
GCGTTCAAGCAGAGGGAGATGGTGGTGATCCCGGAGCATCCAGCGTGGGT
TCAGGAAGCGAAGACGACACCGAGACGGACGACGTAGACCGCCATCAAGA
CTTAGCGGGTCATGACGATAGCTCGGGCGATGAGAGCAAGGCAGTCGTCC
GAAGCAAAGACGAGTTTGGCCGTCACTTCGTGGCCACCCCTGTGTTCACC
GCAGAACAGGCGACAGAAAAGCTTTCTGCTTCCGGGCGCCCTTCCTTCAA
GCCCTTGTCCGGGTCCCACAAGGGCAAATATGGTGCCGTAGGTCTTTCTG
CCGCGGTATCTAGAAACGCCGAGGTTCCTTCTCCATTGCCTCCGGGAGGG
AGCGTTGCCGGAGATCTCGGGGTTTTGCCGAGTCTCGCGGTGGTATGGGA
CGAGTGCATAGGTGGTGAGACGACGGCGCTACAGTCTCTCCTCCTACCGT
CGCTGACAGGCTACCGAGACATGCTTTACTGCGGCTGGCGCGACGAGGAC
GCGTTGGACATCAGGCGGTGCTACGCGCTCCACGCGCTGAACCACGCACT
GACATCGCGGCGCAGAGTCGTGCGGCACAACGCGCGTCTGCGTAAGGCGG
CCGAAGTAGCCAAGGTGGCCGAGGCGATCGCTCGGGGGGCAGGGGAGAAA
GAGACCATAAACGGCGAGAGCGGACATGGGTTTCGACAAAAACATGGCGA
TACCCGGGCAGCAAAGGTAACTGTGGCGGAAGGGAGCGCGAAAAAATCGC
CAGGTGTAAGTGTGGAAGGTGCCGCGACAGTTCCAGCTGTCGACACAGAG
TCGGACGAGTGGCAGCGCGATCAGGGCTTCACCCGCCCTAAGGTTCTCAT
CCTGCTGCCGTTCCGAGACGTGGCGCACGAGCTGCTGGAGATCATGATCG
AGCTGCTGGGACCAAAAACAGTCGTCATCAACAAGGACCGCTTCGACGAG
GAATACGGTCCAGAGAATGAGGATGATGCCTTGGGAGGAAGCCGGCAGTA
CGCCGGCGGGGAAGGAGAGGTCAGAGCGTGCAAGGGCGGTCTTGGGGCGA
AAGCCTGAGAGGCCCAGGACCGCGGACGACGAATGAAGATGATGGAACTC
ACCCTGACGAAGCAGCGAGAGCAGGTCAATCGCCTCAGCCAGCCCAACCG
TGAGCTGGTCGTGGCTGTTCCGGCAAAACCCAAGCCCAGGAGACGGAAGA
GGCCTCGCAACAACAGCAAGGACCCCGTGCGAACCCGTAGCAGCAGTGAT
ATGGCGCACTACAGCAGCAGCGACGATGATGATGGAAACCGAGACGGTGG
GGGCTTCGCCACGGGCCTCGCGAGCTACAAAGAGCTGCTTTCGTCTCTGG
AGCACGCGAACGCGGCGGAGATCTCCGCGGCAGGAGAAGGCGACGAGGAT
CTCGCCTCCGCCGTTGCCTCCAGGCGCATGCAGAGGGAGGGCCTCGAGGG
CTACGGGAGTGAGAGTCAAACTGAAGAGGAAGAGGATGGCGAGGAGGACC
GTGATAATGGAGTCGGAAGAGCAGACGATCTGGAGGAAGAAGCGGGTGAA
GAGCTAGGCGGGGAGGACCTCATAGCCAACGGCGATGACGGCGTTCAAGC
AGAGGGAGATGGTGGTGATCCCGGAGCATCCAGCGTGGGTTCAGGAAGCG
AAGACGACACCGAGACGGACGACGTAGACCGCCATCAAGACTTAGCGGGT
CATGACGATAGCTCGGGCGATGAGAGCAAGGCAGTCGTCCGAAGCAAAGA
CGAGTTTGGCCGTCACTTCGTGGCCACCCCTGTGTTCACCGCAGAACAGG
CGACAGAAAAGCTTTCTGCTTCCGGGCGCCCTTCCTTCAAGCCCTTGTCC
GGGTCCCACAAGGGCAAATATGGTGCCGTAGGTCTTTCTGCCGCGGTATC
TAGAAACGCCGAGGTTCCTTCTCCATTGCCTCCGGGAGGGAGCGTTGCCG
GAGATCTCGGGGTTTTGCCGAGTCTCGCGGTGGTATGGGACGAGTGCATA
GGTGGTGAGACGACGGCGCTACAGTCTCTCCTCCTACCGTCGCTGACAGG
CTACCGAGACATGCTTTACTGCGGCTGGCGCGACGAGGACGCGTTGGACA
TCAGGCGGTGCTACGCGCTCCACGCGCTGAACCACGCACTGACATCGCGG
CGCAGAGTCGTGCGGCACAACGCGCGTCTGCGTAAGGCGGCCGAAGTAGC
CAAGGTGGCCGAGGCGATCGCTCGGGGGGCAGGGGAGAAAGAGACCATAA
ACGGCGAGAGCGGACATGGGTTTCGACAAAAACATGGCGATACCCGGGCA
GCAAAGGTAACTGTGGCGGAAGGGAGCGCGAAAAAATCGCCAGGTGTAAG
TGTGGAAGGTGCCGCGACAGTTCCAGCTGTCGACACAGAGTCGGACGAGT
GGCAGCGCGATCAGGGCTTCACCCGCCCTAAGGTTCTCATCCTGCTGCCG
TTCCGAGACGTGGCGCACGAGCTGCTGGAGATCATGATCGAGCTGCTGGG
ACCAAAAACAGTCGTCATCAACAAGGACCGCTTCGACGAGGAATACGGTC
CAGAGAATGAGGATGATGCCTTGGGAGGAAGCCGGCAGTACGCCGGCGGG
GAAGGAGAGGTCAGAGCGTGCAAGGGCGGTCTTGGGGCGAAAGCCTGA
back to top