mRNA_F-serratus_M_contig77.18956.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 168 bits (425), Expect = 3.940e-43 Identity = 90/206 (43.69%), Postives = 133/206 (64.56%), Query Frame = 1
Query: 214 GFTQFLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSIN-----GDHPFPVDVHLAWYILAILRFVVGFLGWIAITDDGGNAKKPD 813
G F++ GF+++F+LWALS+ GGL+W++++IGQVL+ G+ V +FE+ AVP +T RLG+ +SQRL SI V + P++ L T +L + +V LLFT Y++ ++FY IS AINN+ + R GEVNGLA + S+ A GPA SAL+AFS+ PFP+D LA++++A LR VV L W I D + ++ D
Sbjct: 254 GIYTFIISGFEDLFALWALSTTPVGGLDWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTISQRLSSITLVFVLPLVPVLGRLPNTGHLLMIASVGLLFTVYSTCDAFYTCISFAINNAAEPERCGEVNGLAACVASVVSAVGPAAWSALYAFSVEFADGRSPFPFPIDFRLAFWLMAFLRLVVAILSWSTIKGDKAHERRVD 459
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.310e-41 Identity = 87/195 (44.62%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 214 GFTQFLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSI-LDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGD--HPFPVDVHLAWYILAILRFVVGFLGWIAITDD 789
G F L+GF EI+ LWALS++ASGGL+WT+++IGQVL VG+ +L F++V P ++ R+G+ SQR +P Y FP + LRG+ + L V ++ L F + ++ + ++ I+LA NN+ + RR +NGL+MT+GS++KAAGPA SA+FA+SI+ D PFP+D HL +Y+LA+ V + W I DD
Sbjct: 475 GIYSFSLIGFGEIYPLWALSTVASGGLDWTTKQIGQVLSLVGVGMLAFQLVVYPWLSKRIGVTRSQRWACFLAIPVYAFFPFLSRLRGSGVPLVVGSIVLNFFSNVTATAVFINIALATNNAVEPSRRATLNGLSMTLGSLAKAAGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLALSMTAVCWASWNVIIDD 669
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 155 bits (393), Expect = 1.600e-37 Identity = 80/184 (43.48%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 226 FLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDH-PFPVDVHLAWYILAILRFVVGFLGW 771
F+ +G E++ LWALS++ASGGL+W+S++IGQ L GI +L F+++ P ++ R+G SQR +P ++VFP + +LRGT L ++ LLF T A +N+ ++ ++LA NN+ + RRG + GL+MT GS++KAAGP S++FA+SI+G PFP+D HLA+Y+LA+ +V + W
Sbjct: 436 FVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVLVSWASW 619
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: D8LFV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV4_ECTSI) HSP 1 Score: 145 bits (367), Expect = 4.970e-37 Identity = 78/190 (41.05%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 214 GFTQFLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSIN-----GDHPFPVDVHLAWYILAILRFVVGFL 765
G F++ GF+++F+LWALS+ +GGL W++++IGQVL+ G+ V +FE+ AVP +T RLG+ SQRL S+ V + P++ +L +L + +V LLF YA ++F IS INN+ + R GE+NGLA + S+ GP+ S L+AFS+ PFP+D LA++++A LR VV L
Sbjct: 56 GICMFIISGFEDLFALWALSTTPAGGLGWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVFVLPLVPVLGHLLNAGHLLMIASVGLLFKIYAPCDAFLTCISFTINNAAEPERCGELNGLAACVASVVSKVGPSAWSTLYAFSVEVTDGGSPFPFPIDFRLAFWLMAFLRLVVAIL 245
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A6H5KYW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW2_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.220e-23 Identity = 59/143 (41.26%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 349 LLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDH-PFPVDVHLAWYILAILRFVVGFLGW 771
L F+++ P ++ R+G SQR +P ++VFP + +LR T L ++ LLF T A +N+ ++ ++LA NN+ RRG + GL+MT GS++KAAGP S++FA+SI+G PFP+D HLA+Y+LA+ VV + W
Sbjct: 2 LFFQLLLYPRLSKRIGATRSQRWACFLSIPVFIVFPTLSHLRDTERTLVAASLVLLFLTNAVANTVFINVALATNNAVGPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASW 144
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A7S3HCF8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCF8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.310e-15 Identity = 54/182 (29.67%), Postives = 99/182 (54.40%), Query Frame = 1
Query: 214 GFTQFLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTLLFTTYASSNSFYLAISLA-INNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDHPFPVDVHLAWYILAILRFVV 756
GF+ F++V +EIF+LW ++S A GGL++ +Q+IG ++ G+ L ++ P + RLG R G + + P I Y+ + ++ V L T + + ++YL + I+NS + + VNG+ T S+ + +GP + S LFA+S +P + +L +Y+LA+L ++
Sbjct: 226 GFSSFVVVIGNEIFTLWVVTSRADGGLSYNTQQIGVAVMICGVIGTLLQLTLFPYASDRLGTLGVHRYGGLMFAANSLFIPCIPYISSNPTITMIIVVLALTMQSVAATWYLISTFVLISNSCYSHQLATVNGIGQTCASLGRLSGPYLGSVLFAWSETNGMEWPFNQYLVYYLLALLCVLI 407
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: UPI0009E57986 (probable peptide/nitrate transporter At3g43790 isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E57986) HSP 1 Score: 88.2 bits (217), Expect = 5.940e-15 Identity = 55/176 (31.25%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 226 FLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIK-LSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGD--HPFPVDVHLAWYILAIL 744
F+++GFDE+FSLWA + +GGL +++ +IG L+ V +L +M P RLG K + Q + +I + T + + Y +++L + + +L + + + +NNS + G VNGLAMT SI + P ++FA+SI+ H FP+D HL + +L+++
Sbjct: 338 FIVIGFDELFSLWAATQAENGGLGFSTNQIGTALLCVAAPLLFLQMWTYPKFERRLGAKRVFQLVNAIVGILTASLSAINTYYDRSTVLWPLLIGILLPLKLGVGCGFSSTVILVNNSVPSELLGSVNGLAMTASSICRTLAPLFAGSVFAWSISKGYKHGFPLDEHLTFLLLSVV 513
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A1X7U9W0_AMPQE (MFS domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U9W0_AMPQE) HSP 1 Score: 87.8 bits (216), Expect = 1.590e-14 Identity = 59/186 (31.72%), Postives = 98/186 (52.69%), Query Frame = 1
Query: 226 FLLVGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFP---MIIYLRGTSILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDHP---FPVDVHLAWYILAILRFVVGFL 765
F+++GFDE++SLW +S+ SGG+ + IG L VG+ +L F P + +LG S ++ I E ++FP ++ L L +V V +LF ++ + + A SL INNS + G +NGLA+++ S+ + P +++ S++ FPVD HL + IL + VV L
Sbjct: 1694 FVIIGFDELYSLWCSTSVYSGGIGFNLHEIGISLSVVGVILLPFTFSFFPLMEKKLGSIRSFQIMGIMEFFFIVLFPSLHFLVLLNSRVYLWLVMVIVLFIIRLATTAGFAATSLFINNSVTPDKLGAINGLAVSLTSLFRCISPLFVGTIYSASLSKTTQSIGFPVDYHLIFIILGFILLVVVLL 1879
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: UPI00192EE181 (probable peptide/nitrate transporter At3g43790 isoform X4 n=5 Tax=Myrtoideae TaxID=1699513 RepID=UPI00192EE181) HSP 1 Score: 84.7 bits (208), Expect = 5.820e-14 Identity = 57/174 (32.76%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 235 VGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGD-HPFPVDVHLAWYILAILRFV 753
+ + EIFSLWA+S GGLN++SQ +G+VL G +LLF+++ P + LG + RL + +P +P I L G ++ + + A S S I + +NN+ +RG NG++MT SISKA GPA ALF+++ F + +++L +L+ +
Sbjct: 259 IAYSEIFSLWAVSERKFGGLNFSSQDVGEVLAISGFGLLLFQLLLYPRVEKILGPIMITRLSAGISIPLLSSYPYIAMLSGLTLHIAINFASMLRN-ALSVSVVTGIFILLNNAVPQHQRGAANGISMTAMSISKAFGPACGGALFSWAQKRQVATFLPGDQMVFFVLNLLQMI 431
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A200QTL1_9MAGN (Major facilitator superfamily n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QTL1_9MAGN) HSP 1 Score: 85.5 bits (210), Expect = 6.650e-14 Identity = 58/178 (32.58%), Postives = 94/178 (52.81%), Query Frame = 1
Query: 235 VGFDEIFSLWALSSIASGGLNWTSQRIGQVLITVGIAVLLFEMVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSING-DHPFPVDVHLAWYILAILRFVVGFL 765
+ + EIFSLWA+S GGLN+T++ +G++L G +LL ++ P + LG R+ ++ VP +P+I L G S+ V+ + A SNS + + NN+ +RG NGL+MT S+ KA GPA ALF++ D F + ++IL ++ V+G +
Sbjct: 675 MAYTEIFSLWAVSPRKYGGLNYTTENVGEILSITGFGLLLSQIFLYPMVERILGYMTVTRISAVLSVPLLSSYPLIAKLSGLSLSLVLNCASMLKN-ALSNSIITGLFILQNNAVPQHQRGAANGLSMTAMSLFKAFGPAGGGALFSWGQKRRDASFLPGNQMVFFILTVIE-VIGLI 850 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig77.18956.1 >prot_F-serratus_M_contig77.18956.1 ID=prot_F-serratus_M_contig77.18956.1|Name=mRNA_F-serratus_M_contig77.18956.1|organism=Fucus serratus male|type=polypeptide|length=200bp MVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTLback to top mRNA from alignment at F-serratus_M_contig77:696101..698122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig77.18956.1 ID=mRNA_F-serratus_M_contig77.18956.1|Name=mRNA_F-serratus_M_contig77.18956.1|organism=Fucus serratus male|type=mRNA|length=2022bp|location=Sequence derived from alignment at F-serratus_M_contig77:696101..698122- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig77:696101..698122- >mRNA_F-serratus_M_contig77.18956.1 ID=mRNA_F-serratus_M_contig77.18956.1|Name=mRNA_F-serratus_M_contig77.18956.1|organism=Fucus serratus male|type=CDS|length=1200bp|location=Sequence derived from alignment at F-serratus_M_contig77:696101..698122- (Fucus serratus male)back to top |