mRNA_F-serratus_M_contig769.18940.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: D7FMI1_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI1_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.420e-44 Identity = 73/95 (76.84%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDAL 285
CRFDYQTELHKAQAY+ REVPFIV+NVPE+D+AVQEWS+P L+AALGD ++SIDVSSS+RFLYYG++S DRPPGWTPPTRR TFD+WL AL
Sbjct: 62 CRFDYQTELHKAQAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSHRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHAL 156
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A6H5LQR5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQR5_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.050e-41 Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDALAHGESQPAEAVKMN 327
CRF+YQTELHKA+AY+ REVPFIV+NVPE+D+AVQEWS+P L+AALGD ++SIDVSSSNRFLYYG++S DRP GWTPPTRR TFD+WL AL + + V+ N
Sbjct: 704 CRFNYQTELHKARAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPLGWTPPTRRILDTFDAWLRHALGIRRLEDHQPVRDN 812
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7R9U551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U551_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.300e-15 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRP------------PGWTPPTRRTFGTFDSWLLDAL 285
CRF+Y+TEL K AY E PF+VYNVPE+++ V +WSD LS LGDK + + S +N F+Y+G +P W+PPT TFD ++ AL
Sbjct: 521 CRFNYETELDKCFAYRDAEKPFVVYNVPEVEETVAKWSDLRYLSQRLGDKRYRTEHSLNNHFMYWGNFRPQKPGVHHPRVRNRDGTAWSPPTDIQKLTFDDFMHLAL 627
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7S3GTU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTU2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.160e-13 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 1 CRFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYY--GRKSLDRPP---GWTPPTRRTFGTFDSWLLDAL 285
C FDY E + AY +R EVPF+ YN+PE+D V++WSD + + LG K + + S N F+Y+ R + R W PPT TF+ W+ A+
Sbjct: 512 CHFDYANETQRESAYLYRAAEVPFVAYNIPEVDAVVKKWSDVDYMHSLLGGKKYRTETSEDNHFMYWRQARNTFLRTAEGANWKPPTSIVSTTFEEWVEFAV 613
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7S1XWE3_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWE3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.010e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGR-------KSLDRPPG-WTPPTRRTFGTFDSWLLDAL 285
CRFDY+TEL K AY EVPF+VYNVP +++ +WSD L LG + S N F+Y+ + + L++ G W PT T F +W+ AL
Sbjct: 661 CRFDYETELDKCFAYRDAEVPFVVYNVPAVEETAAKWSDLKYLDGRLGGSNFRTEHSKDNHFMYWQKPRSKSSLEELEKQSGKWESPTTITKMDFRTWMTRAL 763
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 75.5 bits (184), Expect = 1.970e-12 Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 4 RFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDA 282
RFDYQ E + +A R EVPF+++NVP ++ ++W L G+ HS+ S+SN F+YY R+ + + PPT TF WL A
Sbjct: 507 RFDYQNETQRKRAEYLRWHEVPFVLHNVPMINDVAEKWGSDEYLIKRFGNTKHSVTKSTSNHFMYYNRRGAKQQKNYKPPTSSATMTFKQWLQKA 601
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A9USN8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9USN8_MONBE) HSP 1 Score: 65.9 bits (159), Expect = 4.050e-9 Identity = 34/92 (36.96%), Postives = 47/92 (51.09%), Query Frame = 1
Query: 4 RFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWL 273
RFD+ +A+A R EVPF++YNVPE++ A +W+ L G I S+SN F+Y+ R S R + PT FD WL
Sbjct: 535 RFDFSDPKQRARAETLRINEVPFMLYNVPEINDARDKWAKDEYLKQRFGKTPLRITTSTSNHFMYFNRNSAKRAKDYDRPTGEETLLFDQWL 626
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A8J2SRP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRP3_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 7.620e-5 Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 34 AQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDV--SSSNRFLYY------GRKSLDRPPGWTPPTRRTFGTFDSWLLDALAHG 294
A+AY EVPF +Y+VP+++ A W+D L+ K + V S +N F+Y+ GR++ P W PPT TF WL A A G
Sbjct: 146 AEAYRNAEVPFKIYDVPDVEYARDAWTD-VYLTEQFDRKGNQFKVEESENNHFMYWRSPSASGRRAY---PDWAPPTDIVHSTFADWL--AFARG 234 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig769.18940.1 >prot_F-serratus_M_contig769.18940.1 ID=prot_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=polypeptide|length=198bp CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKback to top mRNA from alignment at F-serratus_M_contig769:180832..185111- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig769.18940.1 ID=mRNA_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=mRNA|length=4280bp|location=Sequence derived from alignment at F-serratus_M_contig769:180832..185111- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig769:180832..185111- >mRNA_F-serratus_M_contig769.18940.1 ID=mRNA_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=CDS|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig769:180832..185111- (Fucus serratus male)back to top |