mRNA_F-serratus_M_contig769.18940.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig769.18940.1
Unique NamemRNA_F-serratus_M_contig769.18940.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: D7FMI1_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI1_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.420e-44
Identity = 73/95 (76.84%), Postives = 85/95 (89.47%), Query Frame = 1
Query:    1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDAL 285
            CRFDYQTELHKAQAY+ REVPFIV+NVPE+D+AVQEWS+P  L+AALGD ++SIDVSSS+RFLYYG++S DRPPGWTPPTRR   TFD+WL  AL
Sbjct:   62 CRFDYQTELHKAQAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSHRFLYYGKRSWDRPPGWTPPTRRILDTFDAWLRHAL 156          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A6H5LQR5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQR5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.050e-41
Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 1
Query:    1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDALAHGESQPAEAVKMN 327
            CRF+YQTELHKA+AY+ REVPFIV+NVPE+D+AVQEWS+P  L+AALGD ++SIDVSSSNRFLYYG++S DRP GWTPPTRR   TFD+WL  AL     +  + V+ N
Sbjct:  704 CRFNYQTELHKARAYSLREVPFIVFNVPELDRAVQEWSNPAKLTAALGDHLYSIDVSSSNRFLYYGKRSWDRPLGWTPPTRRILDTFDAWLRHALGIRRLEDHQPVRDN 812          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7R9U551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U551_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.300e-15
Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 1
Query:    1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRP------------PGWTPPTRRTFGTFDSWLLDAL 285
            CRF+Y+TEL K  AY   E PF+VYNVPE+++ V +WSD   LS  LGDK +  + S +N F+Y+G     +P              W+PPT     TFD ++  AL
Sbjct:  521 CRFNYETELDKCFAYRDAEKPFVVYNVPEVEETVAKWSDLRYLSQRLGDKRYRTEHSLNNHFMYWGNFRPQKPGVHHPRVRNRDGTAWSPPTDIQKLTFDDFMHLAL 627          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7S3GTU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTU2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.160e-13
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query:    1 CRFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYY--GRKSLDRPP---GWTPPTRRTFGTFDSWLLDAL 285
            C FDY  E  +  AY +R  EVPF+ YN+PE+D  V++WSD   + + LG K +  + S  N F+Y+   R +  R      W PPT     TF+ W+  A+
Sbjct:  512 CHFDYANETQRESAYLYRAAEVPFVAYNIPEVDAVVKKWSDVDYMHSLLGGKKYRTETSEDNHFMYWRQARNTFLRTAEGANWKPPTSIVSTTFEEWVEFAV 613          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A7S1XWE3_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWE3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.010e-13
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 1
Query:    1 CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGR-------KSLDRPPG-WTPPTRRTFGTFDSWLLDAL 285
            CRFDY+TEL K  AY   EVPF+VYNVP +++   +WSD   L   LG      + S  N F+Y+ +       + L++  G W  PT  T   F +W+  AL
Sbjct:  661 CRFDYETELDKCFAYRDAEVPFVVYNVPAVEETAAKWSDLKYLDGRLGGSNFRTEHSKDNHFMYWQKPRSKSSLEELEKQSGKWESPTTITKMDFRTWMTRAL 763          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5)

HSP 1 Score: 75.5 bits (184), Expect = 1.970e-12
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 1
Query:    4 RFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDA 282
            RFDYQ E  + +A   R  EVPF+++NVP ++   ++W     L    G+  HS+  S+SN F+YY R+   +   + PPT     TF  WL  A
Sbjct:  507 RFDYQNETQRKRAEYLRWHEVPFVLHNVPMINDVAEKWGSDEYLIKRFGNTKHSVTKSTSNHFMYYNRRGAKQQKNYKPPTSSATMTFKQWLQKA 601          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A9USN8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9USN8_MONBE)

HSP 1 Score: 65.9 bits (159), Expect = 4.050e-9
Identity = 34/92 (36.96%), Postives = 47/92 (51.09%), Query Frame = 1
Query:    4 RFDYQTELHKAQAYAFR--EVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWL 273
            RFD+     +A+A   R  EVPF++YNVPE++ A  +W+    L    G     I  S+SN F+Y+ R S  R   +  PT      FD WL
Sbjct:  535 RFDFSDPKQRARAETLRINEVPFMLYNVPEINDARDKWAKDEYLKQRFGKTPLRITTSTSNHFMYFNRNSAKRAKDYDRPTGEETLLFDQWL 626          
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Match: A0A8J2SRP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRP3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.620e-5
Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   34 AQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDKVHSIDV--SSSNRFLYY------GRKSLDRPPGWTPPTRRTFGTFDSWLLDALAHG 294
            A+AY   EVPF +Y+VP+++ A   W+D   L+     K +   V  S +N F+Y+      GR++    P W PPT     TF  WL  A A G
Sbjct:  146 AEAYRNAEVPFKIYDVPDVEYARDAWTD-VYLTEQFDRKGNQFKVEESENNHFMYWRSPSASGRRAY---PDWAPPTDIVHSTFADWL--AFARG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig769.18940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FMI1_ECTSI1.420e-4476.84JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LQR5_9PHAE1.050e-4166.97JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7R9U551_9STRA2.300e-1541.12Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3GTU2_9STRA3.160e-1337.25Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1XWE3_9STRA6.010e-1338.83Hypothetical protein n=4 Tax=Phaeomonas parva TaxI... [more]
F2UI36_SALR51.970e-1236.84JmjC domain-containing protein n=1 Tax=Salpingoeca... [more]
A9USN8_MONBE4.050e-936.96Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A8J2SRP3_9STRA7.620e-535.79Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig769contigF-serratus_M_contig769:180832..185111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.7
Seed ortholog evalue8.8e-38
Seed eggNOG ortholog2880.D7FMI1
KEGG koko:K10277
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
EggNOG OGsKOG2132@1,KOG2132@2759
EC1.14.11.27
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons5
Model size595
Cds size594
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig769.18940.1prot_F-serratus_M_contig769.18940.1Fucus serratus malepolypeptideF-serratus_M_contig769 180832..185111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932301.642878-CDS-F-serratus_M_contig769:180831..1811301622932301.642878-CDS-F-serratus_M_contig769:180831..181130Fucus serratus maleCDSF-serratus_M_contig769 180832..181130 -
1690964242.632855-CDS-F-serratus_M_contig769:180831..1811301690964242.632855-CDS-F-serratus_M_contig769:180831..181130Fucus serratus maleCDSF-serratus_M_contig769 180832..181130 -
1622932301.6633086-CDS-F-serratus_M_contig769:182934..1829841622932301.6633086-CDS-F-serratus_M_contig769:182934..182984Fucus serratus maleCDSF-serratus_M_contig769 182935..182984 -
1690964242.6473558-CDS-F-serratus_M_contig769:182934..1829841690964242.6473558-CDS-F-serratus_M_contig769:182934..182984Fucus serratus maleCDSF-serratus_M_contig769 182935..182984 -
1622932301.68313-CDS-F-serratus_M_contig769:183611..1836981622932301.68313-CDS-F-serratus_M_contig769:183611..183698Fucus serratus maleCDSF-serratus_M_contig769 183612..183698 -
1690964242.6586473-CDS-F-serratus_M_contig769:183611..1836981690964242.6586473-CDS-F-serratus_M_contig769:183611..183698Fucus serratus maleCDSF-serratus_M_contig769 183612..183698 -
1622932301.7041628-CDS-F-serratus_M_contig769:184813..1849141622932301.7041628-CDS-F-serratus_M_contig769:184813..184914Fucus serratus maleCDSF-serratus_M_contig769 184814..184914 -
1690964242.6697404-CDS-F-serratus_M_contig769:184813..1849141690964242.6697404-CDS-F-serratus_M_contig769:184813..184914Fucus serratus maleCDSF-serratus_M_contig769 184814..184914 -
1622932301.7218375-CDS-F-serratus_M_contig769:185054..1851111622932301.7218375-CDS-F-serratus_M_contig769:185054..185111Fucus serratus maleCDSF-serratus_M_contig769 185055..185111 -
1690964242.680164-CDS-F-serratus_M_contig769:185054..1851111690964242.680164-CDS-F-serratus_M_contig769:185054..185111Fucus serratus maleCDSF-serratus_M_contig769 185055..185111 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig769.18940.1

>prot_F-serratus_M_contig769.18940.1 ID=prot_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=polypeptide|length=198bp
CRFDYQTELHKAQAYAFREVPFIVYNVPEMDQAVQEWSDPTILSAALGDK
VHSIDVSSSNRFLYYGRKSLDRPPGWTPPTRRTFGTFDSWLLDALAHGES
QPAEAVKMNRSMDPQSREGSLGSLGEDSCRLSGAAPLGLENYTVGEKDAD
DGDERGRGCRGIAGSGRCRAGVDMVEQPREEEKEDGRGVDGGRSRRGA
back to top

mRNA from alignment at F-serratus_M_contig769:180832..185111-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig769.18940.1 ID=mRNA_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=mRNA|length=4280bp|location=Sequence derived from alignment at F-serratus_M_contig769:180832..185111- (Fucus serratus male)
TGCAGATTCGACTACCAGACGGAGTTGCACAAGGCGCAGGCGTACGCTTT CAGGGAGGTGAGCGAGGCGCTGCGCGTCGCGGGGACCCCTAACAGGGGAG ATGAGGCATGTGGACATCACCATCCCGTTTCGCTGTTACCTTTCGTCAGA GTCCGACGGTTTGTCTGCTTGTGTGCTGGGGCCTGTGTGAGTGACAGGTC CCGTTTATTGTATACAACGTGCCCGAGATGGATCAAGCCGTGCAGGAGTG GAGCGACCCGACGATTCTGTCCGCCGCTCTGGGAGACAAAGTCCACAGGT AAATGTAGTTGAGGGTGTTCATATTGGTAAATGATAGTGTTAGTGTTGGT GTAAATGGTATTACAGTACTATTTAAAGTGTTACTGGTATTACTGGTATG TATGTATGGTCATCACCTACACCAGAGTATGGATCAACCGGGTAAGGTTG CCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGATTACTCCCCTGTC CCCGTACGCGCCTGAGAATGTCTCGCGAGACGGATTTAGCCGTCCCGTCG CGCGTCAGCCTGCTCATTCTCCATACACAGACTGAATATGGTGCGTACTC ATGGGATTACTCCCGATTTCCGCGCGGCGTCCATTTATTTATATGAAACC GCCATACGCCATCGGGTCAGTCCCGAGTTAATCGGGTCACGCAATTGCGT ACCGATGGCGTTCGCTGCCGAGAGTCCCGCCGGCACAGGGCCAGTAGTCA TAGTCCTCAAGGTAGTTCCAATAACGGGTGCTGCCATTTCGCAGGTCACC ATGGACTATGACCAATTAATGTGCGCCTCTCTTTTCCCCACAGTATTGTA AATGATAGAGTAAATAGAGTAAATAGAGTAAATACTGTAATCATGTAAAT GATACCTGGTAGTGTAGATGATGGGGCCGAGTGTAAATTGTAGTCTGAAA TATACTAACTACAGTACCTGGTATTAATATTTTATAATGAGCTAGTGTTG AGTAAAAGGTGAGAGGGGTTGGTGGTGTAAACGTGTAAATGATAGTGTGT GTGTATAACGGCGTAAATGGAACTAGTGTACAAATGATGGCGCTAGTTGT AATGTTTATACAAGGAGGCGTTCTGCGAATGTGAACTGTTCGTCGTGAAC ATCGCAGTACTGCGTCGCGAAGATCGCGGCTCTATTCATTTGTTTGAGCG GAGAGCCTTGGAGTCGCCATCCTACAGTAAACGTGGGGAAATACTCCGTA ATAAAGTACGGTGCGACGTAAGAAACTGTTGCCACCCGCCAGGGAAATTG ATGCAATACCGTAAGAATGCCGACCATTTATGTCTCAAGCCTTTTTTTGT TTTTTGTTCTGTTTTTGTCCCCCCGCATAATACCGTGTGTTGTACTATTG ATATGCTTTGTAGCATTGACGTTTCCAGCAGCAATCGATTCCTTTACTAC GGAAGGAAGAGCTTGGATCGACCGCCGGGCTGGACGCCCCCAACGAGGAG GTACAAAGCCTTACAATATACTCGATTTGATTGGCCGATTAATTATGCCG TCGGAGTACGCATTACGAGTCGATTTCATTGGCCGATGAATTCTACTATT AATAGGTTGAGTTCGACATTGTGAACGAAACACTAAGATTCGATTTGGTT GGGTGACAGGACTCCCGGTAGATGAAAACCTTCGATTCGATTGGCTCGAT CAGCGCGTAAAATAGAAAATCCCCTCGTGTGGTTTGTGGATGGAACTCTC CGACCTGTTAGTGAAATCCCCCTTCCGATTCCATGTAGATCCGATTTGCT AGATTTTTAAGCTGATTTGCTCAAGTTTGTTTCCGCTGCCCTCCTCCGTA AGAGTACAGTCGATCTGCCTCCAACATCACTCCTCTCATCTAGCCGGTAG ACCACACTAATCTCTATCGAATGTGTACATTAAATGTTACCGTGTAGAAT ACGGGGGAAACGTTCTCCACCAGGGGAACTCTCTATCCCCCCCCCCCCCT CCCTTGATACTGCTGCTTTACCGCCTCCCTTGCTTCTGCAAACCTTGTTG TTGACCTCCCCGGATCGTCGATCGCTGATCGTTCTAACTGTTGAATCGTT TGTGGTTGCTGTGCCTACGTCCATCAGGACTTTTGGAACCTTCGATTCTT GGTTGCTGGACGCTCTAGCTCACGGAGGTGCGTCATGTTGAGAAGAGAAA CAACAACCGCAGTCTACTGAGGGTATATACAGTACAGTACTCCAGTTGCG CTGTCCTCTCAGTGTCGGTCACACTATCAATGCTTCTACTGCTAAAGTAT TTTGTAATATGTACTGGTAGTACGTAGTGTTGCTGTATTCTATGATATGA CATACTATAATATGCTTATAATAGTATGTATTTCTGAAGGGAAAATACGA AATTTTCTACAAAATGTACGCAATTGTTTCTATAATATGCTCCTACTACT CTACACTGATACTTTATGGACAGTACAGTATCACACATACATGTCCACTA CATACCAACCTTTATTGTGTTTAAAGAGTGTGGGGGAAAGAGAGGCGCGT AAAAATTGGTCATAGTCCATGGTAATATCTGAAAAGGCAGCACCCGTTAC TGGAATTACGTTGAGGATTACTGGCCCTCTGCCGGCTGGCTCTCGGCAGT AAACGCCATTGGTACGCAATTGCGTGACCTGATAAACTCGCGACCTGACC CGATGGCATATGGCGGCATACCTGACCCGGTGGACACCGTCGTGGAAAAC GGGAGGAATATCACGTGTAAGCACCAGATGAGCCTGAGTATTTAGAATGA GTAGACTGACGCGGGTCGGGACGGCCGAACCCGTCTCGCGCGACCAAATT CTCAGGCGCGAACGGGGGCAGGGAAAACATATTTTCCTCTTTAGCTGACC ACGAGTAGAGCAGGATTGGTAACCGTACTCGGTGGATGAATTCTCTGGTC CATGCGTATGCGTACATACTTATTAATAGTATCTACTACTGGAAGGAAAA AATATACTCCGTATGTGGTATTCTATACTGGTAAGATTTAAGCTATATTC TATGCTAAGCCATAATATCGTATACTTGGTGTGTACTACTGGTCGCCCCG GTAGCTCAGAGGTACCTCGTAACCCTCTGACACGTAGGGACGTGAGTTCG ATCCCGGCAAACGGGATTTTTCTCACTAAAAACTATAAAAATATATATAT ATGCACAACGGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCGACT TCACGGTCGACGAGGGAACGGAATGGCTGAATCCTTCTCGCGATAAAAAA TCAAGGGCACGCACCGCAGAAGGAGGGTGGATAAGAAATCCTGTGTGACC TTCCTCCTGAGTGACCCCGGCTGGTACGTCCATTGATGTCCAGAGTAGAT GGGAAGAAAACACACACACAAATTACTGAATGAATATGCTACCAGGATGT TGTCTAATAACTAATACGTCTATGATACAGATTTTAGTATATACTTGTCA ACATAACTTTTAACACCAATAAAACTATAGCACTATTAATAGATACAGAT AATCAGGTACTAATATTAAGGTACCATTCATGTTACAGGAGAAAAATATA TCACTCCTTTCATCGCAAAGCGTTTTATGCTCAGAAGGTCTAGGTGCGTT CTGTATTTTCTTCAAAAAATACAATACAATACAATACAATACAATACAAT AGTAACATTTCATGTAAGGTATCTGTCTACACACCACTTGAGCGGTAGTC GGCAACAACGACAAAAAAAGCATGACGGGCTTATCCTCGGCAATAGTATT AACAGGTCAAATACCTTTCGCCGCGGAAGTGCACCCTACTTTTCTACATA GTTCTTAGACTAGGGTAGTGTGACATGGTGTCACCTCGGCGTGTCTTCGT CTTTCGGTTCCTATCGGCTCCCACCCTTCTCTGCGTTTTCTCACACGTTC GGGACTCCCCCCTTCTCCGCGCCCCGGACAGAATCGCAACCAGCGGAGGC CGTAAAAATGAACCGGTCGATGGACCCTCAGAGCCGAGAAGGATCATTAG GATCACTCGGAGAGGACTCTTGTCGTTTGTCTGGTGCTGCCCCTTTGGGT CTGGAAAACTACACGGTCGGGGAAAAGGATGCGGATGACGGCGACGAGAG AGGAAGAGGATGTAGGGGCATTGCGGGCAGCGGGCGGTGTCGCGCTGGCG TGGACATGGTTGAGCAGCCTCGAGAGGAAGAGAAAGAGGATGGGCGGGGA GTGGACGGGGGCAGGAGCAGGAGGGGAGCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig769:180832..185111-

>mRNA_F-serratus_M_contig769.18940.1 ID=mRNA_F-serratus_M_contig769.18940.1|Name=mRNA_F-serratus_M_contig769.18940.1|organism=Fucus serratus male|type=CDS|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig769:180832..185111- (Fucus serratus male)
TGCAGATTCGACTACCAGACGGAGTTGCACAAGGCGCAGGCGTACGCTTT
CAGGGAGTGCAGATTCGACTACCAGACGGAGTTGCACAAGGCGCAGGCGT
ACGCTTTCAGGGAGGTCCCGTTTATTGTATACAACGTGCCCGAGATGGAT
CAAGCCGTGCAGGAGTGGAGCGACCCGACGATTCTGTCCGCCGCTCTGGG
AGACAAAGTCCACAGGTCCCGTTTATTGTATACAACGTGCCCGAGATGGA
TCAAGCCGTGCAGGAGTGGAGCGACCCGACGATTCTGTCCGCCGCTCTGG
GAGACAAAGTCCACAGCATTGACGTTTCCAGCAGCAATCGATTCCTTTAC
TACGGAAGGAAGAGCTTGGATCGACCGCCGGGCTGGACGCCCCCAACGAG
GAGCATTGACGTTTCCAGCAGCAATCGATTCCTTTACTACGGAAGGAAGA
GCTTGGATCGACCGCCGGGCTGGACGCCCCCAACGAGGAGGACTTTTGGA
ACCTTCGATTCTTGGTTGCTGGACGCTCTAGCTCACGGAGGACTTTTGGA
ACCTTCGATTCTTGGTTGCTGGACGCTCTAGCTCACGGAGAATCGCAACC
AGCGGAGGCCGTAAAAATGAACCGGTCGATGGACCCTCAGAGCCGAGAAG
GATCATTAGGATCACTCGGAGAGGACTCTTGTCGTTTGTCTGGTGCTGCC
CCTTTGGGTCTGGAAAACTACACGGTCGGGGAAAAGGATGCGGATGACGG
CGACGAGAGAGGAAGAGGATGTAGGGGCATTGCGGGCAGCGGGCGGTGTC
GCGCTGGCGTGGACATGGTTGAGCAGCCTCGAGAGGAAGAGAAAGAGGAT
GGGCGGGGAGTGGACGGGGGCAGGAGCAGGAGGGGAGCCAATCGCAACCA
GCGGAGGCCGTAAAAATGAACCGGTCGATGGACCCTCAGAGCCGAGAAGG
ATCATTAGGATCACTCGGAGAGGACTCTTGTCGTTTGTCTGGTGCTGCCC
CTTTGGGTCTGGAAAACTACACGGTCGGGGAAAAGGATGCGGATGACGGC
GACGAGAGAGGAAGAGGATGTAGGGGCATTGCGGGCAGCGGGCGGTGTCG
CGCTGGCGTGGACATGGTTGAGCAGCCTCGAGAGGAAGAGAAAGAGGATG
GGCGGGGAGTGGACGGGGGCAGGAGCAGGAGGGGAGCC
back to top