mRNA_F-serratus_M_contig769.18936.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A6H5JJC0_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC0_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 1.090e-124 Identity = 193/240 (80.42%), Postives = 211/240 (87.92%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKEKEKKDSKRVSGGHLSRLQGLASKLKEKLASIPPP 921
RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFP NYPQ PPKVKL+TTGGG HRFNPNLYADGKVCLSLLGTWDGDRGESWN+ TSTLLQVLVSIQSLI VP+PFFNEPGYERQLGTE GK+QSWDYNA+QREGTL+LAML M+Q PP GFE VV HFYLRR YLEGL+ Y+ EA +++ SG HL RLQ LA++L+E+ A++ PP
Sbjct: 673 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPHNYPQTPPKVKLMTTGGGTHRFNPNLYADGKVCLSLLGTWDGDRGESWNAQTSTLLQVLVSIQSLIFVPQPFFNEPGYERQLGTELGKTQSWDYNAKQREGTLKLAMLQMLQMPPAGFESVVRGHFYLRRKYLEGLVAQYISEA------TARQGSGQHLKRLQALATQLQEQFATLQPP 906
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 1.070e-121 Identity = 193/240 (80.42%), Postives = 211/240 (87.92%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKEKEKKDSKRVSGGHLSRLQGLASKLKEKLASIPPP 921
RVKRLGQEHADLSQSLPLSLSS+VFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFP NYPQ PPKVKL+TTGGG HRFNPNLYADGKVCLSLLGTWDGDRGESWN+ TSTLLQVLVSIQSLI VP+PFFNEPGYERQLGTE GK+QSWDYNA+QREGTL+LAML M+Q PP GFE VV HFYLRR YLEGL+ Y+ EA +++ SG HL RLQ LA++L+EK A++ PP
Sbjct: 1043 RVKRLGQEHADLSQSLPLSLSSAVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPDNYPQTPPKVKLMTTGGGTHRFNPNLYADGKVCLSLLGTWDGDRGESWNAQTSTLLQVLVSIQSLIFVPQPFFNEPGYERQLGTELGKTQSWDYNAKQREGTLKLAMLQMLQMPPAGFESVVRGHFYLRRKYLEGLVAQYISEA------TARQGSGQHLKRLQALATQLQEKFATLQPP 1276
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A7S2D863_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D863_9STRA) HSP 1 Score: 258 bits (658), Expect = 3.100e-76 Identity = 124/206 (60.19%), Postives = 154/206 (74.76%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKE 819
R++RL QEHADLS+SLPL+ SSSV++R H D+MD MQ +ISGP+DTPYSGGL FD FP +YP PPKV L TTG G RFNPNLY GKVCLSLLGTW G GE+W+ +STLLQV++SIQSLILVPEP+FNEPG+ER++G G + S YN + RE TLR +ML+M+ PP GFE VV HF+ RR++ + ++ E E
Sbjct: 182 RIRRLAQEHADLSKSLPLNPSSSVWIRAHSDRMDCMQFLISGPEDTPYSGGLMLFDTLFPSDYPNSPPKVNLQTTGQGTVRFNPNLYNCGKVCLSLLGTWGGAEGETWDPQSSTLLQVIISIQSLILVPEPYFNEPGHEREMGQAGGSAASSAYNQKIREATLRWSMLEMVVHPPPGFESVVLDHFHHRRAFHQAQCCQWIDELTE 387
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: E9GG68_DAPPU (UBC core domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GG68_DAPPU) HSP 1 Score: 249 bits (635), Expect = 3.590e-73 Identity = 131/244 (53.69%), Postives = 171/244 (70.08%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKEKEKKD---SKRVSGGHLSRLQGLASKLKEKLASIPPPP 924
R+KRL QE A L+ SLPLSLSSSVFVR D++D M+V+I+GP DTPY G F FD++FP +YPQ P +V L TTG RFNPNLY DGKVCLS+L TW G E WN HTS+LLQVLVSIQSLILV EP+FNEPGYER GT +G S DY+ R+ T++ AML+ I+ P F++V + HF+L+R +E ++ E +++ + D S+ V+ G L+ L+ S+LKE+LA + PPP
Sbjct: 26 RMKRLAQEVATLTTSLPLSLSSSVFVRCDTDRLDIMKVLITGPCDTPYGNGCFEFDVYFPPDYPQSPMQVHLATTGRHTVRFNPNLYNDGKVCLSVLNTWHGRPEEKWNPHTSSLLQVLVSIQSLILVSEPYFNEPGYERSRGTPSGNQNSRDYDVNIRQATVKWAMLEQIRNPAPCFKQVTHAHFWLKRQEIEKQCEEWIAEMEKQVENDPNGSRAVAVG-LTALKRHYSQLKEELARLSPPP 268
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A7S2W505_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W505_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.130e-71 Identity = 117/193 (60.62%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYL 780
R++RL QEHADLSQSLP + SSSV++R ED+MD +Q +ISGP+ TPYSGGLF F F P +YP PKVK TTGGGQ RFNPNLY DGKVCLSLLGTW G GE+WN TS+LLQV++SIQSLILVP+P+FNEPG+E ++ T+ G+ S YNA R + M+ + PP GFEEVV RHF R+ ++
Sbjct: 144 RLRRLVQEHADLSQSLPCTASSSVWLRAREDRMDQVQFLISGPEGTPYSGGLFLFSAFIPIDYPNVSPKVKFQTTGGGQVRFNPNLYCDGKVCLSLLGTWRGKAGENWNPLTSSLLQVIISIQSLILVPDPYFNEPGFEAKMMTDEGRLCSSTYNAAIRAENVHFGMISHLLEPPIGFEEVVQRHFRYRKDFI 336
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: UPI0015E22A2A (baculoviral IAP repeat-containing protein 6-like n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E22A2A) HSP 1 Score: 240 bits (613), Expect = 5.490e-71 Identity = 127/269 (47.21%), Postives = 173/269 (64.31%), Query Frame = 1
Query: 118 VLFKASYLAAISSYPLSPTLSNASFNW*RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKE-KEKKDSKRVSGGHLSRLQGLASKLKEKLASIPPP 921
V+FK +Y S T S A R +RL QE LS SLPLS SSSVFVR E+++D M+V+I+GP DTPY+ G F FD++FPQ+YP PP V L TTGG RFNPNLY DGKVCLS+L TW G E WN TS+ LQVLVS+QSLILV EP+FNEPGYER GT +G S +Y+ R+ +++ AML+ ++ P F+EV+++HFYL+R+ + ++ + ++ K R H + L+ ++L+E+L +P P
Sbjct: 10 VMFKVNYHYMSQVKNASDTNSAA-----RSRRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPNSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQASVKWAMLEQMRNPSPCFKEVIHKHFYLKRTEIMSQCEEWIADIQQYSSDKRVGRTMSHHAAALKRHTAQLREELLKLPCP 273
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A834A0T2_9CHIR (Baculoviral IAP repeat containing 6 n=3 Tax=Amniota TaxID=32524 RepID=A0A834A0T2_9CHIR) HSP 1 Score: 241 bits (614), Expect = 5.810e-71 Identity = 121/241 (50.21%), Postives = 162/241 (67.22%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKE-KEKKDSKRVSGGHLSRLQGLASKLKEKLASIPPP 921
R +RL QE LS SLPLS SSSVFVR E+++D M+V+I+GP DTPY+ G F FD++FPQ+YP PP V L TTGG RFNPNLY DGKVCLS+L TW G E WN TS+ LQVLVS+QSLILV EP+FNEPGYER GT +G S +Y+ R+ T++ AML+ I+ P F+EV+++HFYL+R + ++ + ++ K R H + L+ ++L+E+L +P P
Sbjct: 62 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWIADIQQYSSDKRVGRTMSHHAAALKRHTAQLREELLKLPCP 302
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A151ZFA9_9MYCE (Baculoviral IAP repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFA9_9MYCE) HSP 1 Score: 253 bits (645), Expect = 2.340e-70 Identity = 128/236 (54.24%), Postives = 158/236 (66.95%), Query Frame = 1
Query: 109 INNVLFKASYLAAISSYPLSPTLSNASFNW*RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAK 816
+ N++F A L I+ + T + R R+ QE L +SLPL+ SSVF R + +D MQV+I+GP DTPYSGG F F++ F Q YPQ PP V ++TTGGG RFNPNLY GKVCLSLLGTW G GE+WN TSTLLQVLVSIQSLILVPEPFFNEPGYE Q+GT GK S+ YN R T+ AM+DM++ PP+ F+EVV HFY R L+ +V+E+K
Sbjct: 601 LKNLIFDACTLKGITKPGYTSTQA-------RTLRIAQEQGTLIKSLPLNYESSVFARVDDKSIDIMQVLITGPKDTPYSGGCFLFNVVFSQTYPQAPPSVLIMTTGGGSVRFNPNLYNTGKVCLSLLGTWSGGAGENWNPQTSTLLQVLVSIQSLILVPEPFFNEPGYESQMGTPQGKQSSFAYNQNIRVATMEWAMVDMLKNPPEPFKEVVQTHFYYSREKLKNQCAEWVEESK 829
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: A0A498N5Y2_LABRO (Baculoviral IAP repeat-containing 6-like protein n=2 Tax=Cypriniformes TaxID=7952 RepID=A0A498N5Y2_LABRO) HSP 1 Score: 242 bits (618), Expect = 3.410e-70 Identity = 123/241 (51.04%), Postives = 163/241 (67.63%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKE-KEKKDSKRVSGGHLSRLQGLASKLKEKLASIPPP 921
R +RL QE LS SLPLS SSSVFVR E+++D M+V+I+GP DTPY+ G F FD++FPQ+YP PP V L TTGG RFNPNLY DGKVCLS+L TW G E WN TS+ LQVLVSIQSLILV EP+FNEPGYER GT +G S +Y+ R+ T++ AML+ I+ P F+EV++RHFYL+R+ + ++ + ++ K R H + L+ ++L+E+L +P P
Sbjct: 155 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPNSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSIQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHRHFYLKRAEIMAQCEGWICDIQQYSSDKRVGRTMSHHAAALKRHTAQLREELLKLPCP 395
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Match: F0ZKJ6_DICPU (UBC core domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZKJ6_DICPU) HSP 1 Score: 251 bits (642), Expect = 3.780e-70 Identity = 118/209 (56.46%), Postives = 154/209 (73.68%), Query Frame = 1
Query: 202 RVKRLGQEHADLSQSLPLSLSSSVFVRTHEDQMDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFNPNLYADGKVCLSLLGTWDGDRGESWNSHTSTLLQVLVSIQSLILVPEPFFNEPGYERQLGTETGKSQSWDYNARQREGTLRLAMLDMIQRPPKGFEEVVNRHFYLRRSYLEGLLHIYVKEAKEKEK 828
R R+ QE A L +SLP + SSVF R ED +D MQV+I+GP DTPYSGG F F + FPQ++P PP V L+TTGGG RFNPNLYA+GKVCLSLLGTW G+ GE+WN++TSTLLQV VSIQSLILVP+PFFNEPGYE Q+G+ TGK S +YN T+ AM++MI++PP F++++ HFY +R ++ ++++ KE +K
Sbjct: 591 RTIRIAQEQASLIKSLPFNFDSSVFARVDEDNIDCMQVLITGPKDTPYSGGCFLFSVNFPQDFPDSPPHVLLLTTGGGTVRFNPNLYANGKVCLSLLGTWSGNAGETWNANTSTLLQVFVSIQSLILVPDPFFNEPGYESQIGSRTGKVNSLNYNQNLIPSTVDFAMIEMIKKPPPVFKDIITAHFYYQRQKIKQQCDQWIEQFKESKK 799 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig769.18936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig769.18936.1 >prot_F-serratus_M_contig769.18936.1 ID=prot_F-serratus_M_contig769.18936.1|Name=mRNA_F-serratus_M_contig769.18936.1|organism=Fucus serratus male|type=polypeptide|length=212bp MDWMQVMISGPDDTPYSGGLFAFDIFFPQNYPQCPPKVKLVTTGGGQHRFback to top mRNA from alignment at F-serratus_M_contig769:64033..72509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig769.18936.1 ID=mRNA_F-serratus_M_contig769.18936.1|Name=mRNA_F-serratus_M_contig769.18936.1|organism=Fucus serratus male|type=mRNA|length=8477bp|location=Sequence derived from alignment at F-serratus_M_contig769:64033..72509- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig769:64033..72509- >mRNA_F-serratus_M_contig769.18936.1 ID=mRNA_F-serratus_M_contig769.18936.1|Name=mRNA_F-serratus_M_contig769.18936.1|organism=Fucus serratus male|type=CDS|length=1272bp|location=Sequence derived from alignment at F-serratus_M_contig769:64033..72509- (Fucus serratus male)back to top |