mRNA_F-serratus_M_contig7646.18906.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.360e-18 Identity = 101/206 (49.03%), Postives = 110/206 (53.40%), Query Frame = 1
Query: 1 GKYEEVEPLYKRSLVIDEKVYGPDHPEVATA-----RLFK-------------TLPYTNPLLLSQGXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSLNNRALLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASEISWFLLEHCLTPTH---YFSQGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
GKY+E EPLYKRSL IDEKVYGPDHP+VATA RL TL P L+ QG AQSLNNRA LL+ XXXXXXXXXXXXXXXXXXXXXXXX LE L +QGK+ +AEPL ERSQ I+EKV GPEHP VA LNNRA LL+
Sbjct: 352 GKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSICSSALKYLLALTTLLPVVPFLIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRAQXXXXXXXXXXXXXXXXXXXXXXXX-------------------LESQLLSNRAELLRAQGKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLE 538
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 4.190e-12 Identity = 88/192 (45.83%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 1 GKYEEVEPLYKRSLVIDEKVYGPDHPEVAT-----ARLF--KTLPYTNPLLLSQGXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSLNNRALLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASEISWFLLEHCLTPTHYFSQGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
GKYEE EPLY SL IDEKVYGPDH EVA A L + XXXXXXXXXXXXXXXXXXXXXXXXX +Q+LN R + W E Y QG + EA+PLYERSQAI++KV GP+HP VATVLNNRA LL+
Sbjct: 88 GKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQALNKRV---------------------------GVEGKCLCLFATSYRPHFVWLNYE-------YICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLK 245
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 9.730e-11 Identity = 57/186 (30.65%), Postives = 70/186 (37.63%), Query Frame = 1
Query: 1 GKYEEVEPLYKRSLVIDEKVYGPDHPEVATARLFKTLPYTNPLLLSQGXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSLNNRALLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASEISWFLLEHCLTPTHYFSQGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQT 558
GK+EE EPLY+RSL IDE+VYGPDHPEVAT LNN A LL+ +QGK+ EAEPL+ RS AI E+V+GP+HP VAT L+N A LL++
Sbjct: 82 GKHEEAEPLYRRSLAIDEEVYGPDHPEVAT-----------------------------------------------DLNNLAGLLETQIMTSVVRQSHSVNSHEPSTDVLGLRQPDV-------------------------AQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLES 195
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 3.080e-10 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 433 QGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
QGK+ EAEPLYERSQAIQE V GPEHP V T LNNRALLL+
Sbjct: 660 QGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLE 700
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 7.370e-10 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 433 QGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
QGK+ EAEPLYERSQAIQEKV G EHP VA+ LNNR LL+
Sbjct: 18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLR 58
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.200e-9 Identity = 65/200 (32.50%), Postives = 77/200 (38.50%), Query Frame = 1
Query: 1 GKYEEVEPLYKRSLVIDEKVYGPDHPEVATARLFKTLPYTNPLLLSQ---------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSLNNRALLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASEISWFLLEHCLTPTHYFSQGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
GK+ E E LYKRSL IDEKVYGPDHPEVA L L+ SQ G A+SLNN A +L+ S+ S + P + F +AEPLYERS AI EKV+GP+HP VAT LNN A L +
Sbjct: 7 GKFHEAESLYKRSLSIDEKVYGPDHPEVAA-----DLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGVLR--------------------------------------SQAS-------VNPVFEILRN-FQDAEPLYERSLAIDEKVYGPDHPEVATDLNNWAALYE 155
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: D7G3B0_ECTSI (Tetratricopeptide repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B0_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 1.600e-9 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 373 ASEISWFLLEHCLTPTHYF-SQGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLL 552
+SEI + L HC T +H+ +QGK+ EAE LYERS+AI++K P+HP VA LN+RALLL
Sbjct: 185 SSEILFSFLVHCRTLSHFTDAQGKYAEAEQLYERSEAIRDKTLDPDHPDVARSLNDRALLL 245
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 4.250e-9 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 433 QGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
QGK EAEPLYERSQAI+EKV GP+HP VA VLNNRA LL+
Sbjct: 366 QGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLLK 406
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 4.290e-9 Identity = 32/37 (86.49%), Postives = 32/37 (86.49%), Query Frame = 1
Query: 433 QGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRA 543
QGKF EAEPLY RSQAIQEKV GPEHP VAT LNNRA
Sbjct: 434 QGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 5.210e-9 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 433 QGKFPEAEPLYERSQAIQEKVFGPEHPAVATVLNNRALLLQ 555
QGK+ EAEPLYERS AIQEKV GPEHP VAT L+NRA LL+
Sbjct: 693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7646.18906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7646.18906.1 >prot_F-serratus_M_contig7646.18906.1 ID=prot_F-serratus_M_contig7646.18906.1|Name=mRNA_F-serratus_M_contig7646.18906.1|organism=Fucus serratus male|type=polypeptide|length=233bp GKYEEVEPLYKRSLVIDEKVYGPDHPEVATARLFKTLPYTNPLLLSQGKFback to top mRNA from alignment at F-serratus_M_contig7646:12593..14140+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7646.18906.1 ID=mRNA_F-serratus_M_contig7646.18906.1|Name=mRNA_F-serratus_M_contig7646.18906.1|organism=Fucus serratus male|type=mRNA|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig7646:12593..14140+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7646:12593..14140+ >mRNA_F-serratus_M_contig7646.18906.1 ID=mRNA_F-serratus_M_contig7646.18906.1|Name=mRNA_F-serratus_M_contig7646.18906.1|organism=Fucus serratus male|type=CDS|length=1398bp|location=Sequence derived from alignment at F-serratus_M_contig7646:12593..14140+ (Fucus serratus male)back to top |