mRNA_F-serratus_M_contig7632.18899.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: D7G1F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F3_ECTSI) HSP 1 Score: 137 bits (345), Expect = 2.190e-37 Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 KVIDYLDDLDEGKDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDFS 297
+ +DYL DLDEG DP ++E+IK RW VE A+R+IL +FFR G FDGSG +N YDAGSCVDGRLTS WNWCSK+EKK F ++F SGF GF+GDFS
Sbjct: 246 QALDYLTDLDEGSDPVVLEYIKGRWGNVEYAQRYILRNFFRFG----FDGSGGDNNYDAGSCVDGRLTSAWNWCSKIEKKSFVNVFKLSGFSGFDGDFS 340
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE) HSP 1 Score: 136 bits (342), Expect = 4.100e-35 Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 KVIDYLDDLDEGKDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDFS 297
+ +DYL DL EG DP ++E++K RW TVE A+R+IL +FFR G FDGSG +N YDAGSCVDGRLTS WNWCSK+EKK F ++F SGF GF+GDFS
Sbjct: 1122 QALDYLTDLGEGSDPVVLEYVKGRWGTVEYAQRYILRNFFRFG----FDGSGGDNNYDAGSCVDGRLTSAWNWCSKIEKKSFVNVFKLSGFSGFDGDFS 1216
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A7S2N294_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N294_9EUKA) HSP 1 Score: 112 bits (279), Expect = 2.320e-27 Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 4 VIDYLDDLDEGKD--PPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDFS 297
V+ LD L+E + P + +++K + + E A+ IL DFFR AFDGSGA+N YDAGSC+DGRLTS WNWCSKL KK ++HLF +GF GF+GDFS
Sbjct: 288 VLGVLDSLEEVVETAPGVKDYVKALYGSAEAARHAILTDFFRH----AFDGSGADNYYDAGSCIDGRLTSAWNWCSKLSKKQYHHLFKMAGFVGFDGDFS 383
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A836C8L9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L9_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.250e-27 Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 4 VIDYLDDLDEGK--DPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDFS 297
VIDYL+ L D +E++ ++ + A++ IL DFFR AFDGSGA+N DAGSC+DGRLTS WNWCSKLEKK ++ LFM SGF GF+GDFS
Sbjct: 154 VIDYLEGLKNAATADGRALEYVNRIFKGPDRAQQRILADFFRH----AFDGSGADNNNDAGSCIDGRLTSCWNWCSKLEKKSYHRLFMLSGFIGFDGDFS 249
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: D8PQN1_SCHCM (B box-type domain-containing protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PQN1_SCHCM) HSP 1 Score: 113 bits (282), Expect = 4.390e-27 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 43 PPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGD 291
P + +I+ + +VEGA+R IL DFFR G FDGSGA+N +DAGSC+DGRLTS WNWCS LEKK F+HLF+ +GF GF+GD
Sbjct: 538 PAIASYIEDEFGSVEGAQREILSDFFRHG----FDGSGADNFFDAGSCIDGRLTSAWNWCSSLEKKRFFHLFLLTGFVGFDGD 616
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A0L0GC05_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GC05_9EUKA) HSP 1 Score: 112 bits (279), Expect = 1.150e-26 Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 40 DPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDF 294
DP L E+IKT + +V+ KR IL+DFF+ AFDGSGA+N +DAGSC+DGRLTS WNWCS+LEKK +Y +F+ +GF GF+G+F
Sbjct: 548 DPGLAEYIKTTFTSVDNCKRVILNDFFKF----AFDGSGADNFFDAGSCIDGRLTSAWNWCSRLEKKRYYPVFLLTGFVGFDGEF 628
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A5C3NLH6_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Polyporus arcularius HHB13444 TaxID=1314778 RepID=A0A5C3NLH6_9APHY) HSP 1 Score: 106 bits (265), Expect = 1.210e-26 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 37 KDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGD 291
++P L +I+ W + EG R IL DFFR G FDGSGA N +DAGSC+DGRLTS WNWCS LEKK F+ +F+ +GF GF+G+
Sbjct: 136 ENPALRSYIEDEWGSTEGLSREILADFFRHG----FDGSGAGNYFDAGSCIDGRLTSAWNWCSTLEKKRFFPVFLLTGFIGFDGE 216
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A7S3A7Y8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7Y8_9RHOD) HSP 1 Score: 106 bits (264), Expect = 1.830e-26 Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 40 DPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDF 294
D L +IK ++ E AKR IL DFFR G FDGSGA+N YDAGSC+DGRLTS WNWCS +EKK ++ LF+ GF GF+G F
Sbjct: 140 DDDLRAYIKDNYRDAEAAKRLILKDFFRHG----FDGSGADNFYDAGSCIDGRLTSAWNWCSLIEKKSYFSLFLLCGFTGFDGRF 220
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A7R9V045_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V045_9CHLO) HSP 1 Score: 105 bits (261), Expect = 3.050e-26 Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 34 GKDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDF 294
G+DP + ++ + + +VEGA+ IL DF R AFDGSGA+N +DAGSC+DGRLTS WNWCSKLEKK+++ +F +GF F+GDF
Sbjct: 115 GRDPNIAAYLSSIFGSVEGARSAILLDFCRH----AFDGSGADNFFDAGSCIDGRLTSAWNWCSKLEKKNYFPVFKLAGFTSFDGDF 197
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Match: A0A061RKR6_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RKR6_9CHLO) HSP 1 Score: 107 bits (268), Expect = 5.880e-26 Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 37 KDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGSGANNTYDAGSCVDGRLTSVWNWCSKLEKKDFYHLFMCSGFRGFNGDF 294
+DP ++ ++K + +VE ++ IL DFFR AFDGSGA+N +DAGSC+DGRLTS WNWCSK+EKK +Y LF +GF GF+G+F
Sbjct: 270 RDPNILAYVKATFGSVESCRKSILADFFRH----AFDGSGADNFFDAGSCIDGRLTSAWNWCSKVEKKVYYPLFKMAGFVGFDGEF 351 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7632.18899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7632.18899.1 >prot_F-serratus_M_contig7632.18899.1 ID=prot_F-serratus_M_contig7632.18899.1|Name=mRNA_F-serratus_M_contig7632.18899.1|organism=Fucus serratus male|type=polypeptide|length=100bp KVIDYLDDLDEGKDPPLMEFIKTRWQTVEGAKRHILHDFFRSGVSAAFDGback to top mRNA from alignment at F-serratus_M_contig7632:627..2152+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7632.18899.1 ID=mRNA_F-serratus_M_contig7632.18899.1|Name=mRNA_F-serratus_M_contig7632.18899.1|organism=Fucus serratus male|type=mRNA|length=1526bp|location=Sequence derived from alignment at F-serratus_M_contig7632:627..2152+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7632:627..2152+ >mRNA_F-serratus_M_contig7632.18899.1 ID=mRNA_F-serratus_M_contig7632.18899.1|Name=mRNA_F-serratus_M_contig7632.18899.1|organism=Fucus serratus male|type=CDS|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig7632:627..2152+ (Fucus serratus male)back to top |