mRNA_F-serratus_M_contig763.18894.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: D8LSB2_ECTSI (Sacchrp_dh_NADP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB2_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 9.800e-12 Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEIV 590
T++M AECGLCLALD+ LE KKGGVLTTA+AMGMPL++R+ AGMT++I+
Sbjct: 368 TAKMLAECGLCLALDD--LEYKKGGVLTTASAMGMPLVDRLNKAGMTFKIL 416
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: D0LFM8_HALO1 (Saccharopine dehydrogenase (NAD(+), L-glutamate-forming) n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LFM8_HALO1) HSP 1 Score: 65.1 bits (157), Expect = 1.330e-8 Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEIV 590
TS+M AE LCLA D DRL + G VLTTATAMG PL+ER++AAG+ +E+V
Sbjct: 340 TSKMVAESALCLAFDRDRLPERTG-VLTTATAMGQPLLERLQAAGIDFEVV 389
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A2P6VAE6_9CHLO (Saccharopine dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAE6_9CHLO) HSP 1 Score: 64.3 bits (155), Expect = 3.300e-8 Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLES----KKGGVLTTATAMGMPLIERMRAAGMTYEIVQ 593
TS+M E LCLAL + L+ +KGGVLT A+AMGM L+ER+RAAGMTY+I++
Sbjct: 756 TSRMLLESALCLALQQQELDKADDLQKGGVLTAASAMGMVLVERLRAAGMTYKILE 811
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A838PSW3_9ACTN (Saccharopine dehydrogenase NADP-binding domain-containing protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A838PSW3_9ACTN) HSP 1 Score: 63.9 bits (154), Expect = 3.440e-8 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 3
Query: 432 LLTSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEIVQ 593
L TS M E LCLALD DRL ++ GVLT AT MG PL++R+RAAG TYE+++
Sbjct: 357 LATSVMLGESALCLALDGDRLPAR-AGVLTPATGMGTPLVDRLRAAGHTYEVLR 409
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A2V0PKC4_9CHLO (Saccharopine dehydrogenase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PKC4_9CHLO) HSP 1 Score: 63.9 bits (154), Expect = 3.500e-8 Identity = 31/60 (51.67%), Postives = 47/60 (78.33%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLES---KKGGVLTTATAMGMPLIERMRAAGMTYEIVQG*SLA 608
TS+M E GLCLALD +RL+ ++GGVLT A+AMG+ L +R+R+AG+T+++V+ +LA
Sbjct: 361 TSRMLLEAGLCLALDGERLKQAGLRQGGVLTPASAMGLVLADRLRSAGITFDVVKSPALA 420
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A6J4SIT7_9ACTN (Putative membrane protein n=1 Tax=uncultured Solirubrobacterales bacterium TaxID=768556 RepID=A0A6J4SIT7_9ACTN) HSP 1 Score: 63.5 bits (153), Expect = 4.670e-8 Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 3
Query: 432 LLTSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEI 587
L TS M E LCLALD DRL S+ GVLT ATAMG L+ER+RAAG TYE+
Sbjct: 360 LATSVMLGESALCLALDGDRLPSR-AGVLTPATAMGTTLVERLRAAGHTYEV 410
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A2P6TUA0_CHLSO (Saccharopine dehydrogenase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TUA0_CHLSO) HSP 1 Score: 62.4 bits (150), Expect = 1.520e-7 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLESKK----GGVLTTATAMGMPLIERMRAAGMTYEIVQG 596
TS+M E LCLAL + L++ + GGVLT A+AMGM LIER+RAAGMT+++++G
Sbjct: 900 TSRMALEAALCLALQQKELDASRDVQQGGVLTPASAMGMLLIERLRAAGMTFKVLEG 956
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A250WVW5_9CHLO (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WVW5_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 1.570e-7 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 432 LLTSQMFAECGLCLALDEDRLESK---KGGVLTTATAMGMPLIERMRAAGMTYEIVQ 593
L TS+M E GLCLAL++ RL ++ + GV+T A AMGM L+ER+RAAG T+E+V+
Sbjct: 365 LSTSRMVLEAGLCLALEDQRLLAQGCAQSGVMTAAAAMGMVLVERLRAAGFTWEVVR 421
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A0S8BYE4_9DELT (Saccharopine dehydrogenase n=1 Tax=Myxococcales bacterium SG8_38 TaxID=1703407 RepID=A0A0S8BYE4_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 3.760e-7 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEI 587
T+ M +E LCLAL L+++ GG+LT A+AMGMPLIER+RAAGMT+E+
Sbjct: 363 TAVMLSESALCLALQGAELKTE-GGILTPASAMGMPLIERLRAAGMTFEV 411
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Match: A0A3A8QAR8_9DELT (Saccharopine dehydrogenase n=3 Tax=Corallococcus TaxID=83461 RepID=A0A3A8QAR8_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 3.800e-7 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 3
Query: 438 TSQMFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEI 587
TS+M AE GLCLA D K+GGVLT A+AMGM L+ER+R AGMT+E+
Sbjct: 369 TSRMLAESGLCLAFDT---LPKRGGVLTPASAMGMVLVERLRKAGMTFEV 415 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig763.18894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig763.18894.1 >prot_F-serratus_M_contig763.18894.1 ID=prot_F-serratus_M_contig763.18894.1|Name=mRNA_F-serratus_M_contig763.18894.1|organism=Fucus serratus male|type=polypeptide|length=51bp MFAECGLCLALDEDRLESKKGGVLTTATAMGMPLIERMRAAGMTYEIVQGback to top mRNA from alignment at F-serratus_M_contig763:159634..160356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig763.18894.1 ID=mRNA_F-serratus_M_contig763.18894.1|Name=mRNA_F-serratus_M_contig763.18894.1|organism=Fucus serratus male|type=mRNA|length=723bp|location=Sequence derived from alignment at F-serratus_M_contig763:159634..160356- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig763:159634..160356- >mRNA_F-serratus_M_contig763.18894.1 ID=mRNA_F-serratus_M_contig763.18894.1|Name=mRNA_F-serratus_M_contig763.18894.1|organism=Fucus serratus male|type=CDS|length=306bp|location=Sequence derived from alignment at F-serratus_M_contig763:159634..160356- (Fucus serratus male)back to top |