mRNA_F-serratus_M_contig76.18874.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A6H5KL07_9PHAE (SMI1_KNR4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL07_9PHAE) HSP 1 Score: 222 bits (565), Expect = 1.570e-67 Identity = 150/317 (47.32%), Postives = 178/317 (56.15%), Query Frame = 1
Query: 1 NRDILEYLGLDVLRQLEDMRSKG--VRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTA-QHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSRARAXXXXXXXXXXXXA------PLSGSG-------------------------------------GSKAYGLAAFSLDSLCEVGVVALVYGGAPL-----------NRSHPRQCAG-------SDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
NRDIL LG D++ LE MR KG +R+ I D A+ AL+ W+DSNFPYR LP +LRAFL TS+GFSL W + Q + V+GRIR++SLSA+ R+PLD DDL +A +R RAXXXXXXXXXX P SG G S AYG+AAF +DS CEVG VALVYGG P+ R PR + S + K + EL+NPEVWLQDLSCRWHFLAD FTSYFRMM +HLGVLGWQQAF+PVGLSP T+Q
Sbjct: 8 NRDILCRLGFDMMAHLEAMRGKGMGIRDFEIQDCVQASAAALRVWEDSNFPYR----------LPEDLRAFLRTSNGFSLEWASKQQQRSPEEGGSGGENVIGRIRVDSLSAMTRIPLDEDDLRDMAYARTRAXXXXXXXXXXSLPRRRPRFPSSGHGDNGLDAKGFHGGGTAAVLAATFAPSSSEDHAKTPATSSSSAYGIAAFCVDSSCEVGRVALVYGGTPVMGSGGDTDFGERRERPRNSSNGSTREKDSSRNKASATQELSNPEVWLQDLSCRWHFLADGFTSYFRMMVLHLGVLGWQQAFTPVGLSPTTEQ 314
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A7S4QAJ1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QAJ1_9DINO) HSP 1 Score: 102 bits (254), Expect = 4.490e-22 Identity = 80/256 (31.25%), Postives = 111/256 (43.36%), Query Frame = 1
Query: 1 NRDILEYLGLDVLRQLEDMRSKGVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWT---AQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
+R + + L ++ + LE S + V + D + TP LQAW+ + PY +LP + ++FL S+G ++ W+ A + P G + +N L +KRLP RA AP +A AAF LD+ C G VALVY GA A P+VW QD S +WH+LA SFT YFR+ A HLGV WQ AF+ GL P +Q
Sbjct: 26 SRQVFDDLSINAITFLEAHPS--ITAVKLSDRPSVTPDQLQAWEAQHHPY----------ALPEDYKSFLAISNGVTVQWSLRFADQVQP-----------FGTVHVNPLERVKRLP------PACLPPPDRAAGPRAAGGAEAAAPRXXXXXXQAPA-AAFDLDAECAEGRVALVYCGAHEEGERAE-------------ARPATPQVWFQDPSAKWHYLAGSFTDYFRLAATHLGVPQWQFAFTDAGLPPAARQ 238
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: C1EEH4_MICCC (SMI1_KNR4 domain-containing protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EEH4_MICCC) HSP 1 Score: 97.4 bits (241), Expect = 1.210e-20 Identity = 75/239 (31.38%), Postives = 109/239 (45.61%), Query Frame = 1
Query: 67 GVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTA---QHLHPDATSRDNRQVVVGRIRINSLSAIKRLPL-----DSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
GV++V V AT + +QAW+D+N P++ LP +L+AFL +SDGF +TW Q +H +G + INSL+ IK++P+ D D + P G + AAF LDS G VALV+ P + D+L + + +VW QD+S RWH +ADSF+ Y+R+M HLG+ W VG+ T Q
Sbjct: 17 GVQDVKYVQGKPATMSDIQAWEDANSPFK----------LPEDLKAFLLSSDGFKMTWDVLFKQEVHH-----------LGNMHINSLAEIKKMPMMLVPHDDADXXXXXVVPPGSVWDPRREDDGARGP---DGWKPPFPSAAFDLDSSVRHGRVALVF--VPSFEASSSGPNVGDELT-PMRSVPHKAQVWFQDISTRWHIMADSFSEYYRLMTAHLGLPRWHYKLMDVGMDRPTTQ 228
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A8J5XSS8_DIALT (SMI1_KNR4 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSS8_DIALT) HSP 1 Score: 93.2 bits (230), Expect = 6.260e-19 Identity = 64/195 (32.82%), Postives = 90/195 (46.15%), Query Frame = 1
Query: 184 LPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDL---SGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
LP ELRAF SDG SLTW+ +H+ ++ +G + +N L + R +D +L S AS R+R+ P G GL AF LDS G + L+Y + +P+VW QDLS W+F+A SF Y R++ +HLG+ WQ A++ VGL P KQ
Sbjct: 61 LPAELRAFYELSDGLSLTWSVEHM--------GDELPLGCMHVNDLKRLVRADIDPAELRTSSVPASGRSRSP------------PFISIGADGGQGLMAFDLDSTVYDGQLCLLY----------------------CLPATDSPQVWFQDLSRAWYFVAGSFGDYLRLVLMHLGLPRWQHAYTDVGLDPTAKQ 213
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: UPI000D73A23E (tubulin polyglutamylase complex subunit 2-like isoform X1 n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73A23E) HSP 1 Score: 91.7 bits (226), Expect = 4.930e-18 Identity = 68/231 (29.44%), Postives = 100/231 (43.29%), Query Frame = 1
Query: 67 GVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
GV + + A A+ AW+ N TT LP +L+ F TSDGF++ W+ + V VGR+ +N + ++RL L+SD +S + + P SGG + F LD G V +VY K L+A E+W D + WH+LA +FT YFR+M +HLG+ WQ AF+ G+ P +KQ
Sbjct: 30 GVHKIESNEKPPAERPAIIAWEQRN-----------TTFLPEDLKNFFMTSDGFNMNWSVV--------METGTVPVGRLHVNGIGQLQRLDLNSDAVSSTTPNVSILDPDSDDDTDNPSKPKF-SGGFRI-----FELDPCNGYGKVCMVY--------------RDSKPTTVLIAGEMTSEIWFLDRALGWHYLAATFTDYFRLMIMHLGLPHWQYAFTDFGVPPQSKQ 221
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A7S4K9Y7_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K9Y7_GUITH) HSP 1 Score: 89.0 bits (219), Expect = 4.380e-17 Identity = 68/233 (29.18%), Postives = 103/233 (44.21%), Query Frame = 1
Query: 67 GVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLD-SDDLSGIASSRARAXXXXXXXXXXXXAP-LSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
GV V D AA + AL +WD SN P +LP +L+AFL SDG + W A+ LH + + +G + IN+++ + P++ DD + + +P L AF LDS C G V L++ + ++ +VW QDLS RW F++ SFT YFR++ +HLG+ WQ F+ +GL TK+
Sbjct: 22 GVSKVYFHDKAAVSSFALNSWDRSNHP----------CALPEDLKAFLSISDGLLVKWDAR-LHGETFA-------LGCMSINAVNQMVETPVNWEDDAAWTEMLMGQGDLLPPTDSLSSISPSLIQEARLLREKFRAFDLDSSCSNGKVCLLF------------------------VKPSSAQVWFQDLSKRWFFISHSFTDYFRLLVMHLGIPNWQSTFTDIGLDEGTKR 212
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A1B6IQR1_9HEMI (SMI1_KNR4 domain-containing protein n=6 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6IQR1_9HEMI) HSP 1 Score: 87.8 bits (216), Expect = 5.240e-17 Identity = 68/197 (34.52%), Postives = 92/197 (46.70%), Query Frame = 1
Query: 181 SLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSR-ARAXXXXXXXXXXXXAPLSGSG--GSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQV 762
SLP +LR F ++DGF L W ++ + +G +RINS++ +KRL +G+ SS A P S GSK F LD V V LVY +K +G E P++WL D S WHFLAD+FT YFRMM VH G+ WQ F+P+GL+P +Q+
Sbjct: 57 SLPEDLRQFYSSTDGFRLIWNYEYA--------GEVLPIGNLRINSIAELKRL-------AGVKSSGDAECPNLLDIEICNQSEPRSTKPNFGSKCK---VFELDPCQNVAKVCLVY---------------MEKPEGDTRKE--EPKIWLLDRSYEWHFLADTFTQYFRMMLVHQGLPQWQFRFTPMGLTPWAEQM 218
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: UPI001E1DADE6 (tubulin polyglutamylase complex subunit 2-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DADE6) HSP 1 Score: 88.2 bits (217), Expect = 9.390e-17 Identity = 75/268 (27.99%), Postives = 119/268 (44.40%), Query Frame = 1
Query: 4 RDILEYLGLDVLRQLEDMRSKGVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEV---------GVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAEL-----TNP--EVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
+ + E + + VL+ LE+ GV + + A ++ AW+ N T LP +L++F TSDGF LTW + +N V VGR+ +NS+S + + G ++ A SG K + DS C++ G V LV+ N++ P +D + ++ T+P EVW D + RWH++ADSFT+Y+R+M +HLG+ WQ AF+ +GL KQ
Sbjct: 8 KSLFEQMNVGVLKYLEN--KTGVCKLELEPRRPADRPSILAWEQKN-----------TVFLPEDLKSFYLTSDGFLLTWCVKI--------ENGPVPVGRMYLNSVSKMMKF--------GGPANNTLVNPSLADLDADSDAEDETSGTEKP------TFDSRCKIFELDPCDGYGKVCLVF---KENKTAPEYKKSADIVSKVYTSDYMTYGGTDPKIEVWFLDRALRWHYIADSFTAYYRLMIMHLGLPQWQYAFTDIGLCQQAKQ 237
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: A0A3P8VD01_CYNSE (Tubulin polyglutamylase complex subunit 2 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VD01_CYNSE) HSP 1 Score: 87.4 bits (215), Expect = 1.150e-16 Identity = 77/252 (30.56%), Postives = 111/252 (44.05%), Query Frame = 1
Query: 10 ILEYLGLDVLRQLEDMRSKGVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRL--PLDSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
+ E L L + R LE+M GV +V + + A +L +W+ N T LP +LR F T+DGF+LTW + DN V +G + ++S++ + L P+ L S AP + S++ F LDS G V LVY + C +VA+ + E+W D S WHFL +FTSY+R+M HLG+ WQ F+P G SP KQ
Sbjct: 13 VAERLTLGITRILENM--PGVIDVRVAEREPADKRSLLSWEQKN-----------TCILPEDLRDFYQTTDGFTLTWNVK--------LDNECVPLGCMVVHSVARLCPLLQPVSLFSLPNAPSLADLEWDEDSAQSGSETAPAAPHFDSRSR---IFELDSCSGNGKVCLVY----------KNCTPG------VVAQQS--EIWFLDRSLCWHFLTQTFTSYYRLMITHLGLPEWQYNFTPYGPSPQAKQ 222
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Match: UPI0018D5AFA2 (tubulin polyglutamylase complex subunit 2-like isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5AFA2) HSP 1 Score: 87.8 bits (216), Expect = 1.240e-16 Identity = 72/252 (28.57%), Postives = 110/252 (43.65%), Query Frame = 1
Query: 4 RDILEYLGLDVLRQLEDMRSKGVRNVSIVDVAAATPTALQAWDDSNFPYRQEACGTLTTSLPTELRAFLGTSDGFSLTWTAQHLHPDATSRDNRQVVVGRIRINSLSAIKRLPLDSDDLSGIASSRARAXXXXXXXXXXXXAPLSGSGGSKAYGLAAFSLDSLCEVGVVALVYGGAPLNRSHPRQCAGSDKLKGTLVAELTNPEVWLQDLSCRWHFLADSFTSYFRMMAVHLGVLGWQQAFSPVGLSPNTKQ 759
+D+ L L V++ LE + G+ ++++ D+ A + +W+ ++ +C LP +L+ F TSDG LTW + D++ VGR+ IN +S + +L + + S A + F LD + V LVY P Q +PEVWL D + RWHFLA +F+ YFRMM +HLG+ WQ A++ VGLSP KQ
Sbjct: 19 KDLFNQLTLGVVKSLE--KRAGICDITLADLQPAERHQVVSWE------QRSSC-----MLPDDLKRFYLTSDGLLLTWCVRF--------DDQLQPVGRMEINKISNVTKLAGNKAPSNANTPSLADVDYASDEEQCDEDTDVPAKPHFDTRSRI-FELDPCRGIAKVCLVYRNT--KPGSPAQ----------------HPEVWLLDRALRWHFLAHTFSQYFRMMLMHLGLPQWQLAYTDVGLSPQAKQ 230 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig76.18874.1 >prot_F-serratus_M_contig76.18874.1 ID=prot_F-serratus_M_contig76.18874.1|Name=mRNA_F-serratus_M_contig76.18874.1|organism=Fucus serratus male|type=polypeptide|length=254bp NRDILEYLGLDVLRQLEDMRSKGVRNVSIVDVAAATPTALQAWDDSNFPYback to top mRNA from alignment at F-serratus_M_contig76:667077..668484+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig76.18874.1 ID=mRNA_F-serratus_M_contig76.18874.1|Name=mRNA_F-serratus_M_contig76.18874.1|organism=Fucus serratus male|type=mRNA|length=1408bp|location=Sequence derived from alignment at F-serratus_M_contig76:667077..668484+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig76:667077..668484+ >mRNA_F-serratus_M_contig76.18874.1 ID=mRNA_F-serratus_M_contig76.18874.1|Name=mRNA_F-serratus_M_contig76.18874.1|organism=Fucus serratus male|type=CDS|length=1524bp|location=Sequence derived from alignment at F-serratus_M_contig76:667077..668484+ (Fucus serratus male)back to top |