mRNA_F-serratus_M_contig76.18870.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: D7FPG6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG6_ECTSI) HSP 1 Score: 246 bits (627), Expect = 8.640e-72 Identity = 139/225 (61.78%), Postives = 158/225 (70.22%), Query Frame = 3
Query: 252 SNSMTVH--AGQRGTLAATRGRKR-SRLGSV---GGFPETPEVNGHPIHDGWMRKPANPLDGRTNVFGNQEVKAGFDAPVEGIVASTV---ESMEAAAKQSVPLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
S + H AG RG + RG +R SRL + G PE NG+ + + + G +V V++ V ESM+AAAK SVPLKVMVF+DGTWLYYSFFGRGERCHVSAKLGPGW Y+Y VKWEMLPVIISR +HAQLA+Y QSSRLVEVVRTVVFSSAR DTDKDSTRM+MF +MREK FEVHMATT+GVQEKCIDIALAVEM
Sbjct: 84 SEDSSTHNPAGSRGCHGSKRGARRGSRLAAADDDNGGPEYQRRNGYDMEERLEGRAWVVEGGXXXXXXXXDVGVSXXXXXXXAVSNAVPTEESMDAAAKLSVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQSSRLVEVVRTVVFSSARKDTDKDSTRMRMFNAMREKNFEVHMATTVGVQEKCIDIALAVEM 308
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A835YIR6_9STRA (NYN domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR6_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.460e-38 Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 3
Query: 534 LKVMVFVDGTWLYYSFFGRGER-CHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
L+V VFVDGTWLYYSFF R R C + +KLG W DY+V WE +PVI+ R + QL Q+ R VEV RT VFSS R DTD +S RM+MF M+ F+VH++ T G+QEKCIDIALAV+M
Sbjct: 1 LQVQVFVDGTWLYYSFFARTTRNCEIRSKLGAYWYRDYKVLWERIPVIVGRAIQEQLQAQQQTDRFVEVYRTTVFSSLRQDTDPESLRMRMFTQMQRLNFDVHLSVTTGLQEKCIDIALAVDM 123
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A7S3WHV0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WHV0_EMIHU) HSP 1 Score: 134 bits (336), Expect = 2.270e-32 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3
Query: 531 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
PL+VMVFVDG+WLYYSF GR C V + G GW + V ++ LP +IS+ +H QL + + R VE+ RT+VF+S R+DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEM
Sbjct: 73 PLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEM 195
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: R1DRX1_EMIHU (NYN domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRX1_EMIHU) HSP 1 Score: 134 bits (336), Expect = 1.530e-31 Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 3
Query: 531 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
PL+VMVFVDG+WLYYSF GR C V + G GW + V ++ LP +IS+ +H QL + + R VE+ RT+VF+S R+DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEM
Sbjct: 62 PLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEM 184
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A0M0J6Q8_9EUKA (NYN domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6Q8_9EUKA) HSP 1 Score: 128 bits (322), Expect = 7.380e-31 Identity = 58/119 (48.74%), Postives = 87/119 (73.11%), Query Frame = 3
Query: 543 MVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
M+F+DG+WLYYS GR C V+ K G GW+Y + + ++ LP +I++ LH ++ + ++ R VEVVR+V F+S R+DTD S R ++F+ M + ++VH++TT+G QEKCIDIALAVEM
Sbjct: 1 MIFIDGSWLYYSLHGRRPNCPVTRKYGEGWEYSHSIDFDRLPQLIAQRLHKEMLERFKTQRFVEVVRSVAFASMRADTDVQSPRKRLFKGMEKANYDVHLSTTVGHQEKCIDIALAVEM 119
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A7S2R6D8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6D8_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.840e-29 Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 3
Query: 450 KAGFDAPVEGIVASTVESMEAAAKQSV---PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
+AG A E AS+ + A + +V PL+ M+FVDGTWLYY RG C ++ + G W+ + + W LP +I R + +L + S ++V+VV+TVVF+S R +T S R++ F+ M+ F+V+MATT G QEKC+DIALAVEM
Sbjct: 22 RAGNGAVPESTSASSGAADYARLQATVACPPLRTMIFVDGTWLYYCMHERGSSCPITFQFGDAWEQSHTIDWSRLPALIGRSIEEELVRRGGSRQVVDVVKTVVFTSVRKETGHQSKRVRFFQGMQAAHFDVNMATTPGPQEKCVDIALAVEM 174
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A0M0LQY1_9EUKA (NYN domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQY1_9EUKA) HSP 1 Score: 115 bits (289), Expect = 9.350e-28 Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 3
Query: 528 VPLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQ-SSRLVEVVRTVVFSSARSD-TDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
+P KVMVF+DGTWLYY FG G+ C ++ + G GW Y + + LP +IS + A+L + + R VEVVR +VFSS R+D + S R +MF +M+E +EVH+ G QEKC+DIALAV+M
Sbjct: 9 IPTKVMVFIDGTWLYYQLFGNGKHCKLTQRYGDGWGDRYHIDYSRLPQLISDHVSAELMRTQPYAQRAVEVVRVLVFSSFRADEAELISPRQRMFRAMQELHYEVHLGDFAGGQEKCVDIALAVDM 134
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A8J5XLV7_DIALT (SAP domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLV7_DIALT) HSP 1 Score: 122 bits (305), Expect = 2.510e-27 Identity = 62/123 (50.41%), Postives = 84/123 (68.29%), Query Frame = 3
Query: 531 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
PLK M+FVDGTWLYYS F RG+RC + + GPGWQ + V LP +I+ + QL++ + R VEVVRT+VF+S R D D R+ +F+ M++ FEVH+ + G QEKC+DIALAVE+
Sbjct: 75 PLKAMLFVDGTWLYYSLFERGDRCVIRERFGPGWQATHCVDVSQLPPMIAEDIATQLSETLLTPRGVEVVRTLVFTSYREDVQSDQ-RVTLFQQMQDLLFEVHLGSFHGSQEKCVDIALAVEL 196
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A7S3DSQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSQ3_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.020e-26 Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 3
Query: 528 VPLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSSRLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
VPLK M+FVDGTWLYYS FGR +RC + K G GW Y V + +LP +I + L+ +SR +++VR VF+S ++DT S R +MFE M+E ++V+ T+G EKC+DI LAVEM
Sbjct: 245 VPLKAMLFVDGTWLYYSLFGREDRCPIQKKFGLGWPQRYDVDYSVLPKVICKNLNDLGWSSMDTSRPIDIVRASVFTSYKADTPSTSLRYRMFEEMKEANYDVNQMETVGRGEKCVDIQLAVEM 368
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Match: A0A7S1BIU1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIU1_9STRA) HSP 1 Score: 117 bits (293), Expect = 9.250e-26 Identity = 61/146 (41.78%), Postives = 95/146 (65.07%), Query Frame = 3
Query: 480 IVASTVESMEAAAKQ----SVPLKVMVFVDGTWLYYSFFGRG-ERCHVSAKLGPGWQYDYRVKWEMLPVIISRVLHAQLAKYNQSS-RLVEVVRTVVFSSARSDTDKDSTRMQMFESMREKKFEVHMATTMGVQEKCIDIALAVEM 899
+++ + E M++++ + + PLK M+F+DGTWLYYS + R +RC + G GW++ + W LP +I++ L Q+ + N S+ R +E+VR VVF+S ++ TD+ S R+ MF+ M E +EVH+ T G EKCIDI LAVEM
Sbjct: 169 LLSMSKERMDSSSSELKLATTPLKAMLFIDGTWLYYSLYRREPDRCPIIQAYGLGWKHTHNFDWAALPRVIAQELERQMRELNWSTARPIEMVRAVVFTSYKATTDRLSRRITMFQEMAEANYEVHIMETTGTHEKCIDIQLAVEM 314 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig76.18870.1 >prot_F-serratus_M_contig76.18870.1 ID=prot_F-serratus_M_contig76.18870.1|Name=mRNA_F-serratus_M_contig76.18870.1|organism=Fucus serratus male|type=polypeptide|length=283bp MTRVCHRCSSRRISWLNGCAIAVMARLVMALWLVAPSESLSLSPVVAQSRback to top mRNA from alignment at F-serratus_M_contig76:538910..546725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig76.18870.1 ID=mRNA_F-serratus_M_contig76.18870.1|Name=mRNA_F-serratus_M_contig76.18870.1|organism=Fucus serratus male|type=mRNA|length=7816bp|location=Sequence derived from alignment at F-serratus_M_contig76:538910..546725+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig76:538910..546725+ >mRNA_F-serratus_M_contig76.18870.1 ID=mRNA_F-serratus_M_contig76.18870.1|Name=mRNA_F-serratus_M_contig76.18870.1|organism=Fucus serratus male|type=CDS|length=1698bp|location=Sequence derived from alignment at F-serratus_M_contig76:538910..546725+ (Fucus serratus male)back to top |