mRNA_F-serratus_M_contig76.18869.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig76.18869.1
Unique NamemRNA_F-serratus_M_contig76.18869.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig76.18869.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.910e-22
Identity = 185/410 (45.12%), Postives = 211/410 (51.46%), Query Frame = 1 
Query:  148 MSARPKKPDARALFKQAKTRKTESSS---AGAGTSAPSKYQGL-----------SKEQMLALLRAKTAGNTTG--------------QKAAHGASTPSVEARRRAPSPPPAVQIHGVKVVPKASPAAPKGQVQAGGQGLTGLLGIAAADXXXXXXXXXXSGVGGRGVDGSSGAGEPKVTIPQVNVEPVASVPEGLPAGFFDEDVEPPARVGTADRVITGGVDEVXXXXXXXADTTPIGAAATGGFGPERAAXXXXXXXXXXXXXXXXXXXRLAALKAAGVFQAVVVAA-----GAPAEADEGSAPGAGEGEAAAPNGSALPEGFFDDPEVDAQSRGVDLKAKKKEDEQNDWKEFMSFAEEXXXXXXXXXXXXXXXXXXXXXXXXLEQATMMGKLAVLMNKFESVGHKRRR 1278
            MS   KKPDARALFKQAK+RK E+S      AG SA S   G            SKE++LAL RAK                     Q+ +  +S      R+     P      G    P   PA P+GQVQA G GLTGLLGI A D  XXXXXXXX              G     +           PEGLPAGFFDED+   A                XXXXXX     P+G      FG ERAA     XXXXXXXXX     +LAA++AAG+    VVAA     GA A+               APNGSALPEGFFDDPE+DA+SRGVDLKA+KK                XXXXXXXXXXXXXXXXXXXXXXXX EQATMMG+LA+LMNK ES+  ++R+
Sbjct:    1 MSNHQKKPDARALFKQAKSRKGENSGKNVVSAGGSAVSGRSGAXXXXXXXXXXXSKEELLALYRAKKXXXXXXXXXXXXXXXXXXXTQRPSDKSSGSPATGRKPTVKVPVMTAASGAGR-PSVQPA-PRGQVQAEGVGLTGLLGIGAGDSSXXXXXXXXXXXXXXXXXXRH-PGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDL---AXXXXXXXXXXXXXXXXXXXXXXRPQAPPVGR-----FGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLL---VVAADGATGGAAADXXXXXXXXXXXXXXXAPNGSALPEGFFDDPEMDAKSRGVDLKAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLALLMNKSESIITRKRK 396
[Close]
BLAST of mRNA_F-serratus_M_contig76.18869.1 vs. uniprot
Match: A0A835ZL64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL64_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 8.940e-6
Identity = 26/52 (50.00%), Postives = 40/52 (76.92%), Query Frame = 1 
Query: 1498 MREVAVASAPTDAAATDISSMLQGRKLKKKKEVEEAFAGEYVPLDPLDWRAR 1653
            +R+V+ A AP D AA ++S+ML+ ++ K+++   EAF G+YVPLDP DWRA+
Sbjct:  430 LRDVSGARAPDDGAALEVSNMLRSKRKKRRQAEREAFEGDYVPLDPSDWRAK 481
[Close]
BLAST of mRNA_F-serratus_M_contig76.18869.1 vs. uniprot
Match: W7TUP1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.050e-5
Identity = 66/238 (27.73%), Postives = 101/238 (42.44%), Query Frame = 1 
Query:  946 DEGSAPGAGEGEAAAPNGSALPEGFFDDPEVDAQSRGVDLKAKKKEDEQNDWKEFMSFAEEXXXXXXXXXXXXXXXXXXXXXXXXLEQATMMGKLAVLM-NKFESVGHKRRRPSXXXXXNAPGGATESGEGSSENTTKKAKNSKGGNEYQLEGRDEDETVRPPSSEMKNKAREDVEMSVEKTGSAMREVAVASAPTDAAATDISSMLQGRKLKKKKEVEEAFAGEYVPLDPLDWRARG 1656
            + GS P + + E ++ + SALP GFFDDPE DA +  +DL A+K+ + + +W++F  FA +                XX      LE      +LA L+    E+   + ++      X       + GE  S +       SK           E  T R    +     +E V       G   RE          AA +IS+ML+ +K +KK+ ++E     YV  DPLDWRA+ 
Sbjct:  195 EAGSLPSSPKPETSSASTSALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWXXEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEXXXXXXXMKKGEAVSNSGALPGVPSKA----------EAPTWRAVPEDEDGDGKERV-------GDEGRE------KETVAALEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAKS 409
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTR9_9PHAE1.910e-2245.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZL64_9STRA8.940e-650.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TUP1_9STRA3.050e-527.73Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig76contigF-serratus_M_contig76:533281..538724 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score108.2
Seed ortholog evalue1.1e-20
Seed eggNOG ortholog2880.D7FPG5
KEGG koko:K13104
Hectar predicted targeting categoryother localisation
EggNOG OGs2D068@1,2SCZH@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-14_004850.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons7
Model size1974
Cds size1515
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932281.6906357-UTR-F-serratus_M_contig76:533280..5335921622932281.6906357-UTR-F-serratus_M_contig76:533280..533592Fucus serratus maleUTRF-serratus_M_contig76 533281..533592 -
1690964233.1856391-UTR-F-serratus_M_contig76:533280..5335921690964233.1856391-UTR-F-serratus_M_contig76:533280..533592Fucus serratus maleUTRF-serratus_M_contig76 533281..533592 -
1622932281.9018826-UTR-F-serratus_M_contig76:538577..5387241622932281.9018826-UTR-F-serratus_M_contig76:538577..538724Fucus serratus maleUTRF-serratus_M_contig76 538578..538724 -
1690964233.28329-UTR-F-serratus_M_contig76:538577..5387241690964233.28329-UTR-F-serratus_M_contig76:538577..538724Fucus serratus maleUTRF-serratus_M_contig76 538578..538724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932281.7212403-CDS-F-serratus_M_contig76:533592..5340431622932281.7212403-CDS-F-serratus_M_contig76:533592..534043Fucus serratus maleCDSF-serratus_M_contig76 533593..534043 -
1690964233.1972106-CDS-F-serratus_M_contig76:533592..5340431690964233.1972106-CDS-F-serratus_M_contig76:533592..534043Fucus serratus maleCDSF-serratus_M_contig76 533593..534043 -
1622932281.7933435-CDS-F-serratus_M_contig76:534485..5345501622932281.7933435-CDS-F-serratus_M_contig76:534485..534550Fucus serratus maleCDSF-serratus_M_contig76 534486..534550 -
1690964233.2071743-CDS-F-serratus_M_contig76:534485..5345501690964233.2071743-CDS-F-serratus_M_contig76:534485..534550Fucus serratus maleCDSF-serratus_M_contig76 534486..534550 -
1622932281.8135128-CDS-F-serratus_M_contig76:534873..5349281622932281.8135128-CDS-F-serratus_M_contig76:534873..534928Fucus serratus maleCDSF-serratus_M_contig76 534874..534928 -
1690964233.2171474-CDS-F-serratus_M_contig76:534873..5349281690964233.2171474-CDS-F-serratus_M_contig76:534873..534928Fucus serratus maleCDSF-serratus_M_contig76 534874..534928 -
1622932281.8333175-CDS-F-serratus_M_contig76:535385..5359921622932281.8333175-CDS-F-serratus_M_contig76:535385..535992Fucus serratus maleCDSF-serratus_M_contig76 535386..535992 -
1690964233.2275727-CDS-F-serratus_M_contig76:535385..5359921690964233.2275727-CDS-F-serratus_M_contig76:535385..535992Fucus serratus maleCDSF-serratus_M_contig76 535386..535992 -
1622932281.8531024-CDS-F-serratus_M_contig76:536301..5363681622932281.8531024-CDS-F-serratus_M_contig76:536301..536368Fucus serratus maleCDSF-serratus_M_contig76 536302..536368 -
1690964233.247291-CDS-F-serratus_M_contig76:536301..5363681690964233.247291-CDS-F-serratus_M_contig76:536301..536368Fucus serratus maleCDSF-serratus_M_contig76 536302..536368 -
1622932281.8715434-CDS-F-serratus_M_contig76:536638..5367761622932281.8715434-CDS-F-serratus_M_contig76:536638..536776Fucus serratus maleCDSF-serratus_M_contig76 536639..536776 -
1690964233.266335-CDS-F-serratus_M_contig76:536638..5367761690964233.266335-CDS-F-serratus_M_contig76:536638..536776Fucus serratus maleCDSF-serratus_M_contig76 536639..536776 -
1622932281.8885355-CDS-F-serratus_M_contig76:538445..5385771622932281.8885355-CDS-F-serratus_M_contig76:538445..538577Fucus serratus maleCDSF-serratus_M_contig76 538446..538577 -
1690964233.2748818-CDS-F-serratus_M_contig76:538445..5385771690964233.2748818-CDS-F-serratus_M_contig76:538445..538577Fucus serratus maleCDSF-serratus_M_contig76 538446..538577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig76.18869.1prot_F-serratus_M_contig76.18869.1Fucus serratus malepolypeptideF-serratus_M_contig76 533593..538577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig76.18869.1

>prot_F-serratus_M_contig76.18869.1 ID=prot_F-serratus_M_contig76.18869.1|Name=mRNA_F-serratus_M_contig76.18869.1|organism=Fucus serratus male|type=polypeptide|length=505bp
MSARPKKPDARALFKQAKTRKTESSSAGAGTSAPSKYQGLSKEQMLALLR
AKTAGNTTGQKAAHGASTPSVEARRRAPSPPPAVQIHGVKVVPKASPAAP
KGQVQAGGQGLTGLLGIAAADSSSDDDDDEDSGVGGRGVDGSSGAGEPKV
TIPQVNVEPVASVPEGLPAGFFDEDVEPPARVGTADRVITGGVDEVGAGG
RDEADTTPIGAAATGGFGPERAAELAAQAAAEAEADAVREAERLAALKAA
GVFQAVVVAAGAPAEADEGSAPGAGEGEAAAPNGSALPEGFFDDPEVDAQ
SRGVDLKAKKKEDEQNDWKEFMSFAEEVKKAEKEEEQEEEAVEEDKEQYE
ELEQATMMGKLAVLMNKFESVGHKRRRPSSSSGGNAPGGATESGEGSSEN
TTKKAKNSKGGNEYQLEGRDEDETVRPPSSEMKNKAREDVEMSVEKTGSA
MREVAVASAPTDAAATDISSMLQGRKLKKKKEVEEAFAGEYVPLDPLDWR
ARGR*
back to top

mRNA from alignment at F-serratus_M_contig76:533281..538724-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig76.18869.1 ID=mRNA_F-serratus_M_contig76.18869.1|Name=mRNA_F-serratus_M_contig76.18869.1|organism=Fucus serratus male|type=mRNA|length=5444bp|location=Sequence derived from alignment at F-serratus_M_contig76:533281..538724- (Fucus serratus male)
GCCGTGAGACTGCTGTTGACTCCCAACAGGTGACGAGTTCGTCTGGTTTT
GTTTTCCGTATCAAACGCAGCACCCCAGACGACACGGTGGAACATCGGTA
CAAATAAAATTTAAAGAGATATTTTGTGTACAGAGCGTTTGAGAGACATG
TCTGCCCGACCGAAGAAGCCAGATGCTCGGGCTCTGTTCAAGCAGGCCAA
GACACGCAAGACAGAGAGTAGCAGCGCTGGCGCTGGGACATCAGCACCCA
GCAAATATCAAGGGCTGAGCAAGGAGCAGGTGTGTAGCGTACGTTTTGAG
TTTTGAAAATGTCCATGCCCTTTCGCAGCCACAGCGTCGGACTTGGCGAT
AGGAACCTGATGCGAAAACAGTCTCCACTCTCATAGCATTTTGTACACCA
AAATGAAGTGTACTCGTACGCGACAGTAGTACAAGGAATACTCCCACCAC
TTGCTGTATCGTACTATTAATAATTCAACGGTGGTACGGCCGAGGTACTC
ATGCAGCACAGCAGTACTGTACTACAAGCTGTACTTCGTACTAAAGATGT
CTTGACTCGACGTAAGATCTACGGCAGTTCGTGAACATTATGTATGTACT
GTACATCGTTCAATCTTTCGCACGAGTTCGAGTACTCCTCTACGAACTAC
TGATTCCCTGTAAGCTGGACTTTGTGCTGGGACTACAACTACCTAGACTA
TACCTGGTGCTATTTTAGGTCTACTACAAGCTGGGCTGGCCAAGAAACTG
ACTTCTGTTCGTTCATGTCTCGCTCTGCCGTTTCCACGAGTTAAAGCTTG
AAATTTGGAGGCTGCTCCTATACGGCAAAAAGGGAAGCGCAGGCGCCGGA
ATTTTTCGAATCCGAGTTGATTTTGGTAAACAATGACCAATTGGCGGCGT
AGTGGAGGATACTTCCTATACTAAAATCAGTATCAAAAAAAGTGTCACGG
ATCAAGCTGAAATTTGGTGTACACGTATCCAGGAGCACCGCAAGAGCGTG
GGTGGTAGTTACAAGGCTCGCCTCGTTTTCTATCAAGAGTTGCGGCCTCG
TAAAGATTCCGATACAAAACACAAGTGAACTGAGGAAATGTGGGGGTATC
GCGATTTGCCACGCGGTTTTTACGATTTTTCACCTGAAATTTTGACACGT
GATTTAGACCGCTCTTGCGGAGAGGACCACCACTGCACATTTTTATTTAT
TGCTATTTTTTCCATCATTTCGTCGCGAAACAAATATTCCCACATCTACT
TATATCCGGCTATCATACCATAACTTACGAAAAAAAAACTAAAACCAAAA
TGTGCAGTGGTGGTCCTCTCCGCAAGAGCGGTCTTAATAAGGTGTCAAAA
TTTCTGGTGAAAAATCGTAAAAACCGCGTGGCAAATCTCATTCCGCCATG
TGTACAGCGTCTTGGCCAGCCCAGCCTGTATTAATATATGCTATTATAGT
CTAGTATGTACTCTGTATCTTGAGTTACCTGCTGTACGAGAACGGCCGGT
TGTCGGTTGTGGTATAATATCTCCAACTGGAACGTGGCTCCACCCCTACT
TGTAGAGCTGGCGGGTACAATCCCAGGCGTACAACACAAGGCTGCAATGG
CGGAAGCCGGTTCCCCAAATTGATGCTCGTGGTCGTAGGACGTTGGACTC
GAGCCTTTTTTTCTTCAAATAAATCGACCCAAAAGCGTACCGGTACAGGT
TCTTGATGCGCTGGGACTCTTGTTTGTAGCAGCTTAAGGAGACAGCAACG
CAAGAGCTTGAACACGCAGAGACAGGCTGAGACGCGGGTTAAGAAAGCGA
AGGGTTCCTAAAGGATCCAGCAGACGGCATTTCTTGCTCCAAATTTGACC
TATTAATAGTACGTACGTGATGATTTTCGTGCACTTAAGCTCTAAAAGGC
TTGATCCCGACCCTCTTCTCCCGTATCGTTTTGTCTCTCAAACCCAAGAT
GTTAGCCTTGCTACGGGCTAAGACGGCGGGAAATACCACAGGCCAGAAGG
CCGCGCATGGTGCGTCGACCCCTTCGGTGGAGGCCCGGCGGCGAGCGCCC
TCTCCGCCGCCCGCTGTACAAATCCACGGAGTCAAGGTGTGTGCGGTACC
GGTATCCTTGCAAGTAACTGTTAATAGCCAAGCGACATACCTGGTATGCC
GTAGGGTTTGAGACTTGGTTGCCTGTTTCGGCGGAAGGCAAACCATACAG
CCATTAGGACGTATGGTGCCCGATATCATTATAAAACAGCGCTCCTCGAC
GATTTGTAATACCCGTCTGCCACACATGTTTAAAGATTATACTACTCTTA
CCTATTACATCAACACCTAGCGTTCGCGTGCGTTTTATGGCCCCTCCTCG
AAGCAGGTCGTACCAAAGGCAAGCCCTGCCGCTCCGAAGGGGCAAGTCCA
GGCGGGTGGCCAAGGACTCACAGGTCAATCAAATCGGCTACCACGCCCTT
CGACGCCGCAGTAGGCGTATCCGCTAGTGAATGCTTTTAAAATCCGATGT
TGTTTGTTGGCAAAGGCTACAGTGGGATCTGTAAGTGGTCGTCTGTTGGC
GTCGGTGCACCGCACAAACTCCTCCCCCCCCCCCCTGCCCCCCCAACGAC
CGCGGGGCCTGTGCTAAACTGAATACGTAAAATTGCGCACAGCCATGAAT
TGATAATTTTAGTAACCTAACCTGTTCTGGAACACAATCTGCAACCTTGT
GGAATATTCTTCGTCATTTTTTGTCCGGCCAGGTCTCCTTGGTATCGCTG
CGGCCGACAGCAGCAGCGACGACGACGATGATGAAGACAGTGGCGTCGGC
GGAAGGGGGGTCGATGGCAGTAGCGGAGCAGGGGAGCCGAAAGTCACGAT
CCCCCAGGTCAACGTGGAACCCGTGGCTAGTGTTCCCGAAGGATTGCCAG
CGGGTTTCTTCGACGAAGACGTCGAGCCGCCTGCAAGAGTCGGTACGGCA
GACAGAGTAATCACTGGCGGTGTTGATGAGGTGGGCGCAGGTGGACGAGA
CGAGGCGGATACAACACCAATCGGGGCAGCCGCGACGGGGGGGTTTGGAC
CCGAGCGAGCCGCAGAGCTTGCCGCCCAAGCTGCGGCGGAAGCAGAGGCG
GATGCCGTCCGCGAAGCGGAGAGACTGGCTGCATTGAAGGCGGCGGGAGT
ATTCCAAGCAGTTGTGGTAGCCGCGGGTGCTCCTGCGGAAGCGGACGAAG
GGAGTGCGCCTGGAGCTGGAGAAGGGGAGGCGGCGGCGCCCAACGGTTCT
GCTCTACCAGAGGGATTCTTTGACGACCCAGAGGTGGACGCCCAATCCCG
TGGGGTGGACCTCAAGGCTAAAAAGAAAGAAGATGAGCAGTGAGTCGGCG
CCCGATCCACCATATTTCCATTGGCGCTCGGGTCTCTAGCGCTCGGAGGT
TGCGTAATCGGCTGCGAAATCACGCTTCAAATTCCAGGCCATTGGTGTTA
TATACCTATTGCACGACCGCCATATACTTAAACGTATCTATCTGACTATG
TTGTCAACATGCTGACAGTTTATTTTTACTTGTAACATCCGACGGCTGCC
GTTCCGTGCCGCCATGTGCCGCCAAGTCCAGGCGCACGGTGCGTTCGGCT
TTTGTCCTCCTCTAGTCCTCTCTAGATATTTACACCGTTTTCTGCGACAT
GCTGATGTGTCGTGAACGTGTGGTTTCTTTTTTGCTGTGAGAATTGGTCG
AGGTGTCGACGTCAACTGGTGATGCGCACACCGTCTTGAGTTGCTTTCCT
TTCTTCTCTCCCCGCTGTATACTGTCCTCGCCCCCCCGCCGGGCAGGAAC
GATTGGAAAGAGTTTATGTCCTTCGCTGAAGAGGTGAAGAAGGCCGAGAA
GGTGAGCGCGCTCCCGGTGGACTACCCGCCGCTGAGAGGGCGGTCTGCGC
AGATCCTTGGAACGACTTGGATGATAAATCGGATACCTCCCGCGTGTTTT
CTGTCCATTGATCAGTTGTCCCTGAGCATTCGTGGTCACTCGGTTGCAAA
CTCGCTTCGCTGGGGGTGGGTGTCACGCTTTAGATAGGTCTTGTCACTAT
CAATAGGAGGTATCAATGTCGATGGATTAGTTCACGACCTTCTCCCCGAT
TAAGATAGGGTACTTGACTCTGAACGCGAGCATGCTTTTGTTTATTTTGA
CCAATGTCGGCCATTGTCGACCAGGAGGAGGAGCAAGAGGAGGAGGCCGT
CGAGGAAGACAAAGAACAATACGAGGAGTTGGAACAAGCGTGAGTGGCGC
CTCCCGCCCTGCGGTGCTTGAGGTCCACATTCTGTACACCGTTAGCGGGA
TGGTTTGGAAGAGCTTGTAGCAAGGCCCGCGTTGTATCTGCTGATAGATT
GTACACCACGGTCGTGTACACTTGACGGCGCACAAGCGACCCCTTTTGCC
TCCGGCGAAGAGACTGGGGACCCTGAAATCTACTTTTCTACTAGCCACTC
TCAGATATTTCTATTACAGTATTATCACTTAAAGGTCTCAACAACCAATC
GCGGCGCTGTCGCAACATCTGTGTACCCAAGTTCTCGCTTTATCGTACCT
TTTGCTGCATCTTCTTCGAGTAGCACGTTAGTCATCTCCACGGCAGACTG
CGTCCCTTGCCTCTCGCCCTCGTGCCTACTGACAACGAAAAAACGAACGC
GTGTTTTGCTCCTCCCGGCATCGCTGTGAAGCACCATGATGGGAAAACTC
GCAGTGCTCATGAACAAGTTCGAGAGCGTCGGGCACAAGCGCAGGCGTCC
GTCATCATCTTCGGGAGGCAACGCGCCGGGGGGAGCGACGGAGAGCGGGG
AAGGCAGCAGCGAGAACACCACCAAAAAAGCAAAGAACAGCAAAGGGGGC
AACGAGTACCAGCTCGAGGGAAGGGACGAGGACGAGACGGTGCGACCACC
GTCTTCAGAAATGAAGAACAAAGCGAGAGAAGACGTTGAAATGTCGGTTG
AAAAGACGGGTTCCGCTATGCGCGAGGTGGCGGTGGCATCGGCGCCAACG
GACGCGGCGGCGACGGATATCTCGAGCATGCTGCAGGGACGAAAGCTCAA
GAAAAAGAAGGAGGTGGAGGAGGCGTTCGCGGGAGAGTACGTGCCCTTGG
ACCCCCTGGATTGGCGAGCGAGGGGACGATAATATTTGTGTGTGTGGTAC
TTACGTTGATTGACTTCCTATCTCTGAATTCTCAGAAAGACTTACATCAT
CTTTAGTACGGGATGGCGAAGGAGGGCGTGCTAGGGGAAAAAATGGCCAC
CCTGGTCGTAGCTTGGTAACACAAAATAAACTAATAATATTATGAGGAAG
ATTTTTGCAAAGAGCATTTCGCCAGCGTAAGGGCGGTTTTTATGGGAACA
AAATCTTGTACAAAAATCTTAAATTTTTTGACAAGATTTTCGTGCGAAAA
TCTGGTCGTCGAAGATTTCGTCACGCTCCCTATGGGGAAAAATC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig76:533281..538724-

>mRNA_F-serratus_M_contig76.18869.1 ID=mRNA_F-serratus_M_contig76.18869.1|Name=mRNA_F-serratus_M_contig76.18869.1|organism=Fucus serratus male|type=CDS|length=3030bp|location=Sequence derived from alignment at F-serratus_M_contig76:533281..538724- (Fucus serratus male)
ATGTCTGCCCGACCGAAGAAGCCAGATGCTCGGGCTCTGTTCAAGCAGGC
CAAGACACGCAAGACAGAGAGTAGCAGCGCTGGCGCTGGGACATCAGCAC
CCAGCAAATATCAAGGGCTGAGCAAGGAGCAGATGTCTGCCCGACCGAAG
AAGCCAGATGCTCGGGCTCTGTTCAAGCAGGCCAAGACACGCAAGACAGA
GAGTAGCAGCGCTGGCGCTGGGACATCAGCACCCAGCAAATATCAAGGGC
TGAGCAAGGAGCAGATGTTAGCCTTGCTACGGGCTAAGACGGCGGGAAAT
ACCACAGGCCAGAAGGCCGCGCATGGTGCGTCGACCCCTTCGGTGGAGGC
CCGGCGGCGAGCGCCCTCTCCGCCGCCCGCTGTACAAATCCACGGAGTCA
AGATGTTAGCCTTGCTACGGGCTAAGACGGCGGGAAATACCACAGGCCAG
AAGGCCGCGCATGGTGCGTCGACCCCTTCGGTGGAGGCCCGGCGGCGAGC
GCCCTCTCCGCCGCCCGCTGTACAAATCCACGGAGTCAAGGTCGTACCAA
AGGCAAGCCCTGCCGCTCCGAAGGGGCAAGTCCAGGCGGGTGGCCAAGGA
CTCACAGGTCGTACCAAAGGCAAGCCCTGCCGCTCCGAAGGGGCAAGTCC
AGGCGGGTGGCCAAGGACTCACAGGTCTCCTTGGTATCGCTGCGGCCGAC
AGCAGCAGCGACGACGACGATGATGAAGACAGTGGCGTCGGCGGAAGGGG
GGTCGATGGCAGTAGCGGAGCAGGGGAGCCGAAAGTCACGATCCCCCAGG
TCAACGTGGAACCCGTGGCTAGTGTTCCCGAAGGATTGCCAGCGGGTTTC
TTCGACGAAGACGTCGAGCCGCCTGCAAGAGTCGGTACGGCAGACAGAGT
AATCACTGGCGGTGTTGATGAGGTGGGCGCAGGTGGACGAGACGAGGCGG
ATACAACACCAATCGGGGCAGCCGCGACGGGGGGGTTTGGACCCGAGCGA
GCCGCAGAGCTTGCCGCCCAAGCTGCGGCGGAAGCAGAGGCGGATGCCGT
CCGCGAAGCGGAGAGACTGGCTGCATTGAAGGCGGCGGGAGTATTCCAAG
CAGTTGTGGTAGCCGCGGGTGCTCCTGCGGAAGCGGACGAAGGGAGTGCG
CCTGGAGCTGGAGAAGGGGAGGCGGCGGCGCCCAACGGTTCTGCTCTACC
AGAGGGATTCTTTGACGACCCAGAGGTGGACGCCCAATCCCGTGGGGTGG
ACCTCAAGGCTAAAAAGAAAGAAGATGAGCAGTCTCCTTGGTATCGCTGC
GGCCGACAGCAGCAGCGACGACGACGATGATGAAGACAGTGGCGTCGGCG
GAAGGGGGGTCGATGGCAGTAGCGGAGCAGGGGAGCCGAAAGTCACGATC
CCCCAGGTCAACGTGGAACCCGTGGCTAGTGTTCCCGAAGGATTGCCAGC
GGGTTTCTTCGACGAAGACGTCGAGCCGCCTGCAAGAGTCGGTACGGCAG
ACAGAGTAATCACTGGCGGTGTTGATGAGGTGGGCGCAGGTGGACGAGAC
GAGGCGGATACAACACCAATCGGGGCAGCCGCGACGGGGGGGTTTGGACC
CGAGCGAGCCGCAGAGCTTGCCGCCCAAGCTGCGGCGGAAGCAGAGGCGG
ATGCCGTCCGCGAAGCGGAGAGACTGGCTGCATTGAAGGCGGCGGGAGTA
TTCCAAGCAGTTGTGGTAGCCGCGGGTGCTCCTGCGGAAGCGGACGAAGG
GAGTGCGCCTGGAGCTGGAGAAGGGGAGGCGGCGGCGCCCAACGGTTCTG
CTCTACCAGAGGGATTCTTTGACGACCCAGAGGTGGACGCCCAATCCCGT
GGGGTGGACCTCAAGGCTAAAAAGAAAGAAGATGAGCAGAACGATTGGAA
AGAGTTTATGTCCTTCGCTGAAGAGGTGAAGAAGGCCGAGAAGGAACGAT
TGGAAAGAGTTTATGTCCTTCGCTGAAGAGGTGAAGAAGGCCGAGAAGGA
GGAGGAGCAAGAGGAGGAGGCCGTCGAGGAAGACAAAGAACAATACGAGG
AGTTGGAACAAGCGAGGAGGAGCAAGAGGAGGAGGCCGTCGAGGAAGACA
AAGAACAATACGAGGAGTTGGAACAAGCCACCATGATGGGAAAACTCGCA
GTGCTCATGAACAAGTTCGAGAGCGTCGGGCACAAGCGCAGGCGTCCGTC
ATCATCTTCGGGAGGCAACGCGCCGGGGGGAGCGACGGAGAGCGGGGAAG
GCAGCAGCGAGAACACCACCAAAAAAGCAAAGAACAGCAAAGGGGGCAAC
GAGTACCAGCTCGAGGGAAGGGACGAGGACGAGACGGTGCGACCACCGTC
TTCAGAAATGAAGAACAAAGCGAGAGAAGACGTTGAAATGTCGGTTGAAA
AGACGGGTTCCGCTATGCGCGAGGTGGCGGTGGCATCGGCGCCAACGGAC
GCGGCGGCGACGGATATCTCGAGCATGCTGCAGGGACGAAAGCTCAAGAA
AAAGAAGGAGGTGGAGGAGGCGTTCGCGGGAGAGTACGTGCCCTTGGACC
CCCTGGATTGGCGAGCGAGGGGACGATAACACCATGATGGGAAAACTCGC
AGTGCTCATGAACAAGTTCGAGAGCGTCGGGCACAAGCGCAGGCGTCCGT
CATCATCTTCGGGAGGCAACGCGCCGGGGGGAGCGACGGAGAGCGGGGAA
GGCAGCAGCGAGAACACCACCAAAAAAGCAAAGAACAGCAAAGGGGGCAA
CGAGTACCAGCTCGAGGGAAGGGACGAGGACGAGACGGTGCGACCACCGT
CTTCAGAAATGAAGAACAAAGCGAGAGAAGACGTTGAAATGTCGGTTGAA
AAGACGGGTTCCGCTATGCGCGAGGTGGCGGTGGCATCGGCGCCAACGGA
CGCGGCGGCGACGGATATCTCGAGCATGCTGCAGGGACGAAAGCTCAAGA
AAAAGAAGGAGGTGGAGGAGGCGTTCGCGGGAGAGTACGTGCCCTTGGAC
CCCCTGGATTGGCGAGCGAGGGGACGATAA
back to top