mRNA_F-serratus_M_contig757.18824.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: D8LU73_ECTSI (Flagellar outer dynein arm light chain 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU73_ECTSI) HSP 1 Score: 238 bits (608), Expect = 2.690e-78 Identity = 116/129 (89.92%), Postives = 123/129 (95.35%), Query Frame = 3
Query: 135 EQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
E RRGPPVVEIVLPTYITKPSEDEKFYPSEVKA+AEKAV+ ELQDKEYD EEAKEWSLNIAD IREG+KTL VPRYKIVVQVTIG+MKDQGVRVASRCLWDTATDNYASVQF+N SLWCSAM+FG+YTE
Sbjct: 4 EPRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 132
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A835ZA97_9STRA (Flagellar outer dynein arm light chain 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA97_9STRA) HSP 1 Score: 192 bits (489), Expect = 3.460e-60 Identity = 90/133 (67.67%), Postives = 111/133 (83.46%), Query Frame = 3
Query: 123 MEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
ME+ Q +G V+++VLPTY+ KP+EDE FYP++ KA++EK V+ EL KEYD +EAKEWSLNIAD IRE IK L +PRYK+VVQVT+G+MKDQGVRVASRCLWDTATDNYASV ++ SLWC+ M FG+YTE
Sbjct: 1 MEE-SQPKGRQVIDVVLPTYVMKPAEDEVFYPAKAKAMSEKIVKAELGGKEYDEQEAKEWSLNIADAIREQIKQLSIPRYKVVVQVTVGQMKDQGVRVASRCLWDTATDNYASVNYKTQSLWCNVMCFGIYTE 132
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A7S2V6C1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C1_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.060e-54 Identity = 83/130 (63.85%), Postives = 105/130 (80.77%), Query Frame = 3
Query: 135 EQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKT-LKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
E G P+VE+VLPTYI P+EDEKFY S+VKAIAE+ ++ EL+ KEY+ EAK WS+ I D +RE +K +PRYK+VVQV++G+MKDQGVRVASRCLWDT TDNYASV ++N +LWCS M+FG+YTE
Sbjct: 4 EPMPGQPIVEVVLPTYIMNPAEDEKFYQSQVKAIAERILKEELEGKEYEENEAKLWSITICDRVREHVKEECNIPRYKVVVQVSLGQMKDQGVRVASRCLWDTNTDNYASVSYKNHTLWCSCMVFGIYTE 133
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A7S3JVI1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVI1_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.220e-50 Identity = 77/135 (57.04%), Postives = 100/135 (74.07%), Query Frame = 3
Query: 117 RSMEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
+ ED R G V+E++LPTY KP EDEKFYPS+ KAI E +R L +EYD E AKEW NI + I++ +KTL +PRYK++ Q+TIG+++DQGV +ASRCLWD A DNYASV F N SLW +AM+FG+YT+
Sbjct: 4 QQAEDGGPRPGQRVIEVILPTYAMKPGEDEKFYPSKAKAICEDILRTTLAGQEYDEELAKEWVTNIGNDIKDKVKTLNIPRYKVICQITIGQVRDQGVSIASRCLWDVAHDNYASVNFSNDSLWANAMVFGVYTD 138
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A6U3X956_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X956_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.340e-50 Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 3
Query: 126 EDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKT-LKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
ED R G PVV++VLPTYI KP+E+E FYPSE+K IAE V+ EL K YD +++KE ++ I I+E IK +PRYKIV+QVTIGEMK+QGVRVASRCLWD TDNYASVQ+ N LWC+AM+FG++TE
Sbjct: 19 EDNGPRAGQPVVDVVLPTYIMKPAENEIFYPSEIKKIAEAVVKSELDGKLYDEDDSKESNVLICGKIKERIKEKCNLPRYKIVIQVTIGEMKNQGVRVASRCLWDNITDNYASVQYTNQHLWCTAMVFGIFTE 151
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A7S2FB08_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB08_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.910e-48 Identity = 81/134 (60.45%), Postives = 99/134 (73.88%), Query Frame = 3
Query: 126 EDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYD-VEEAKEWSLNIADMIREGIKT-LKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
+D R G ++E+VLPTYI KP E E FYPS VK IA + EL K YD EEAK+W+ I + I+ +K +PRYKI+VQVT+G+MKDQGVRVASRCLWDTATDNYASV++ N LWCSAM+FG+YTE
Sbjct: 14 DDGGPRPGQSIIEVVLPTYIMKPEETEIFYPSHVKRIAGAILEEELAGKMYDDEEEAKKWNTTICEKIKAQVKAECDIPRYKIIVQVTLGQMKDQGVRVASRCLWDTATDNYASVEYANQHLWCSAMVFGVYTE 147
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: F0YJJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ5_AURAN) HSP 1 Score: 162 bits (409), Expect = 5.070e-48 Identity = 76/133 (57.14%), Postives = 98/133 (73.68%), Query Frame = 3
Query: 123 MEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
M+D R G V+E+VLPTY P+E EKFYPSE K I E+ + G+L++ YD E AKEW L I + I+ IK+L +PRYK+VVQVTIG+MKDQGV VASRCLWD + DNYASV + N +LW + M+F +YT+
Sbjct: 1 MQDDGPRPGQQVIEVVLPTYSMNPTEVEKFYPSEAKQICERVLTGQLENATYDDESAKEWILLIGNTIKSEIKSLNIPRYKVVVQVTIGQMKDQGVSVASRCLWDISNDNYASVNYTNETLWANVMVFVIYTD 133
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A6S8SDH5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SDH5_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.990e-47 Identity = 74/127 (58.27%), Postives = 97/127 (76.38%), Query Frame = 3
Query: 141 RRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
R G V+EI+LPTY KP+EDEKFYPS+++ I +A++ EL +KEY + AK+W L I + I+ K+L +PRYK++VQVTIG+MKDQGV VASRCLWD DNY SV + N SLW +AM+FGLYT+
Sbjct: 6 RPGQQVIEIILPTYSMKPAEDEKFYPSKIRQICTEALKDELDNKEYFEDGAKDWILTIGNKIKAQAKSLNLPRYKVIVQVTIGQMKDQGVSVASRCLWDLLFDNYTSVNYTNSSLWANAMVFGLYTD 132
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: F0YN77_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN77_AURAN) HSP 1 Score: 159 bits (403), Expect = 4.250e-47 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 3
Query: 123 MEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKTLKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
+++ R G V+E+VLPTY P+E E+FYPSE K I E+ + GEL +KEY + AK+W ++I + I+ IK L VPRYKI+VQVTIG+MKDQGV VASRCLWD DNY SV F N SLW + M+FG+YT+
Sbjct: 2 IQEEGPRPGQQVIEVVLPTYSMIPAEQERFYPSEAKRICERVLVGELDNKEYFEDSAKDWIISIGNTIKSEIKCLTVPRYKIIVQVTIGQMKDQGVSVASRCLWDITFDNYTSVNFTNSSLWANVMVFGVYTD 134
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Match: A0A7R9YER0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER0_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.270e-43 Identity = 74/134 (55.22%), Postives = 99/134 (73.88%), Query Frame = 3
Query: 123 MEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKEYDVEEAKEWSLNIADMIREGIKT-LKVPRYKIVVQVTIGEMKDQGVRVASRCLWDTATDNYASVQFRNPSLWCSAMIFGLYTE 521
M+D+ GP + PTYI KP EDE+FYPS+V+ IA++ + EL+ K Y+ EE+K+ SL + ++I+E +K +PRYKIVVQVTIGEM+DQGVRVASRCLWDT+TDNY S + N SLW A++FG YT+
Sbjct: 1 MDDIVTT-GPREIIDYKPTYILKPEEDERFYPSQVQKIAKEVLLAELEGKTYNEEESKDLSLGLCELIKERVKEGTNIPRYKIVVQVTIGEMRDQGVRVASRCLWDTSTDNYTSATYTNTSLWAVAIVFGCYTD 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig757.18824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig757.18824.1 >prot_F-serratus_M_contig757.18824.1 ID=prot_F-serratus_M_contig757.18824.1|Name=mRNA_F-serratus_M_contig757.18824.1|organism=Fucus serratus male|type=polypeptide|length=134bp MEDVEQRRGPPVVEIVLPTYITKPSEDEKFYPSEVKAIAEKAVRGELQDKback to top mRNA from alignment at F-serratus_M_contig757:120381..121588+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig757.18824.1 ID=mRNA_F-serratus_M_contig757.18824.1|Name=mRNA_F-serratus_M_contig757.18824.1|organism=Fucus serratus male|type=mRNA|length=1208bp|location=Sequence derived from alignment at F-serratus_M_contig757:120381..121588+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig757:120381..121588+ >mRNA_F-serratus_M_contig757.18824.1 ID=mRNA_F-serratus_M_contig757.18824.1|Name=mRNA_F-serratus_M_contig757.18824.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig757:120381..121588+ (Fucus serratus male)back to top |