mRNA_F-serratus_M_contig753.18795.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig753.18795.1
Unique NamemRNA_F-serratus_M_contig753.18795.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 8.760e-98
Identity = 227/703 (32.29%), Postives = 343/703 (48.79%), Query Frame = 1
Query:  136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRH-LSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE----------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARRST---------IPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDAS-GKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKEERDGAAGAAFIAKTTDVANNIAL*VEQTD 2178
            ++   K+   RR+V  C +DL P  +     F+ +LG  SP ++T     +T N+ LDEL   V   +  +L    E    +G++GP++  Q+D+T+    E++T +  ++      M R+    +AFPG  +A++I+PW+ ++T+E F+  +GE    +PS +++  TVDQG N +N  T +GV V  C+ HR  T V WALGI+G  R         +N     L+ K+  M GVF HS  NNDELKE+Q       +  +L+  NDTRW SQ  M+ RVL L   I EYF ++  + R L P EW    E+ S+L D + +  +M QG     VGQA+    ILH  +E           P   +  L P   P  +     L    + VL  L ++M ++G+G A    ER++  +DPRL+S       NG   L++   DD+ A    FD       VG A                +AP+PA               P   +    PA +  +L+R+  ++   VA  +T           S S TR     RE   Y+AE    +   F++  YW  R  D V A+ GKV  PA  P+L  +AR++ GI+ TSCQAERNFS+L  ++  LR ++   K+E+++F+RLN HL+      VREL       D A   A  AKT    +++A   E+ +
Sbjct:    5 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES--VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGR---------LNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM-QGSVDTHVGQAM---FILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFD-------VGPA---------------TAAPAPA---------------PVMNLDRVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAE----VREL-------DAAVVKAKAAKTKVAQSSMAAQEERAN 644          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.150e-96
Identity = 228/702 (32.48%), Postives = 342/702 (48.72%), Query Frame = 1
Query:  136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRH-LSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE----------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRST---------IPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDAS-GKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKEERDGAAGAAFIAKTTDVANNIAL*VEQTD 2178
            ++   K+   RR+V  C +DL P  +     F+ +LG  SP ++T     +T N+ LDEL   V   +  +L    E    +G++GP++  Q+D+T+    E++T +  ++      M R+    +AFPG  +A++I+PW+ ++T+E F+  +GE    +PS +++  TVDQG N +N  T +GV V  C+ HR  T V WALGI+G  R         +N     L+ K+  M GVF HS  NNDELKE+Q       +  +L+ RNDTRW SQ  M+ RVL L   I EYF ++  + R L P EW    E+ S+L D + +  +M QG     VGQA+    ILH  +E           P   +  L P   P  +     L    + VL  L ++M ++G+G A    ER++  +DPR KS       NG   L++   DD+ A    FD       VG A                +AP+PA              DP    P     +  +L+R+  ++   VA  +T           S S TR     RE   Y+AE    +   F++  YW  R  D V A+ GKV  PA  P+L  +AR++ GI+ TSCQAERNFS+L  ++  LR ++   K+E+++F+RLN HL+      VREL       D A   A  AKT    +++A   E+ +
Sbjct:  200 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES--VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGR---------LNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM-QGSVDTHVGQAM---FILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFD-------VGPA---------------TAAPAPAPVMN---------LDPVEPAP-----KKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAE----VREL-------DAAVVKAKAAKTKVAQSSMAAQEERAN 839          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 4.590e-87
Identity = 207/667 (31.03%), Postives = 325/667 (48.73%), Query Frame = 1
Query:  136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTR--HLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARRSTIPSASETRMDAGL--------REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELES 2082
            L    +E    R+V  C ++L P  M +   F+ +LG  SP ++     + T +++LD L S V+  I   L    E    +G++G ++  Q+D+T+    E++T + +++      + RV    +AFPG  +AD+I PW+ ++T E F   +GE    EP  +++  TVDQGGN +N    +GVPV  C+ HR  T V WALGI+G  R          N     L+ K+  + GVF HS  NND+LKE+Q    +L     L+ RNDTRW SQ  M+ R+L L   I EYF    H SR+   P EW    E+ S+L D + +  +M QG +   + QA+    I+H  +E       P++     +P     +E+    L    + VL  L+  ME++ +G+A  + ER++  +DPR KS   A   NG   L++   +D+ A    FD   +P                      S P+PA A             P   V    PA +  +L+R+  ++   VA  S   ++   +             RE   Y+AE       +F++  +W  R  D V   +G V  PA  P+L  +AR+F GI+ +SCQAERNFS+L  ++  LR ++ + K+E+++ +RLN HL+      VREL++
Sbjct:  198 LDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGED--VEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR---------NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQP-EWTITNEVCSLLSDVSEVTIRM-QGAKDTHISQAM---FIIHEVMEMLREDSHPIRAQNATEP-----EEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFD--VQP----------------------SEPAPAPA-------------PVLNVDPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDE----VRELDA 802          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 4.610e-86
Identity = 245/750 (32.67%), Postives = 370/750 (49.33%), Query Frame = 1
Query:    1 HPAEHKAALKDSRHTSEGKAKRAMDASGVEPPSKRGTPL-------------DLLQC--PLSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQ--------VTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFT-RHLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALEDPVQEIRCL-QPWDGP---KKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRSTIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKE--ERDGAAGAAFIAKTTDVANNIA 2157
            HPA +KA + D   T++G+A  A   +    P+ + T               D +Q   PL A+ +    RR+V  CA+++ P +M     ++ ++G   P ++       T N  L  + +   D +   L    ES  K+G+ GP++  Q+D+T+  + E++T S ++I+     + RV   T+AFPG  +A +IEPW+ +        +T E F  ++GE    +P  +++  TVDQGGN +N    + V V  C+AHR  +   WALGI+G+ R          N   +KL+ ++  + GVF HS  NNDELK+IQ    E     +L+ RNDTRW SQHAM+ R+L+L  AI EYF     + R L   EW    E+ S+LD  A +  + +QG     + Q + +   +       V +IR   QP++     K+++    L      V   ++ +MEK+ LG A    ERI   LDPR K C +   +NG   L+ +   DV +    F        +G+A  XXXXXXXXXXXXX   P+P                    V + +  R  RL R+ AK     A R+   + S  R  A + RE   Y+AE       +F L E+W+ R+     A    VEP   PHL L+AR+F GI++TSCQAERNFS+L  ++  LR+S+   K+E+++FLRLN   IP       E+++L +  E + AA A    K   V    A
Sbjct:  120 HPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGEN--VQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGE-------NPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVK-IQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF----AEADLGSASSXXXXXXXXXXXXXNQ-PAPK----------------KQKVLSDLEER--RLQRL-AKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP-------EVKALHDAVEANKAAAARCQEKVAQVEAEAA 827          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.280e-60
Identity = 190/540 (35.19%), Postives = 271/540 (50.19%), Query Frame = 1
Query:  562 QVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFT-RHLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALEDPVQEIRCL-QPWDGP---KKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRSTIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKE--ERDGAAGAAFIAKTTDVANNIA 2157
            Q+T E F  ++GE    +P  +++  TVDQGGN +N    + V V  C+AHR  +   WALGI+G+ R          N   +KL+ ++  + GVF HS  NNDELK+IQ    E     +L+ RNDTRW SQHAM+ R+L+L  AI EYF     + R L   EW    E+ S+LD  A +  + +QG     + Q + +   +       V +IR   QP++     K+++    L      V   ++ +MEK+ LG A    ERI   LDPR K C +   +NG   L+ +   DV +    F        +G+A  XXXXXXXXXXXXX   P+P                    V + +  R  RL R+ AK     A R+   + S  R  A + RE   Y+AE       +F L E+W+ R+     A    VEP   PHL L+AR+F GI++TSCQAERNFS+L  ++  LR+S+   K+E+++FLRLN   IP       E+++L +  E + AA A    K   V    A
Sbjct:    2 QLTTEFFADMMGEN--VQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGE-------NPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVK-IQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF----AEADLGSASSXXXXXXXXXXXXXNQ-PAPK----------------KQKVLSDLEER--RLQRL-AKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP-------EVKALHDAVEANKAAAARCQEKVAQVEAEAA 499          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.160e-51
Identity = 221/813 (27.18%), Postives = 340/813 (41.82%), Query Frame = 1
Query:  133 PLSATEKEEQTRRYVAMCAVD-LHPFSMLNSAAFQWYLGGYSPSF-------------------------ITEKPHHT----TINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHS--------------TEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQ----GGNTMN-TFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGA--DSCMNLGCKKLISKVTTMAGVFKH------------------SVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRHLSRRALFPLEWQAVLELVSILDDPARINKQM-------------VQGGRHA----------------------------------FVGQAINDFAILHAALEDPVQEIR--------------------CLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNL----------------------------LVARRSTIPSASETRMDAGLR-EFSEYMAEAAFANNSEFDLFEYWRARAVDGVDA-SGKVVEPARWPHLGLVARVFAGIDTTSCQAERNF-------SSLKSVVSDL-RASLGAEKIEKILFLRLNSHLIP 2049
            P+SA +     RR+V MCA+  L P S+ +    + ++GG +P +                         +TE  +      T N  L +LC+GVR  + + L A  ES +++GW+GP+V +QVD T                   E  T S +++S D+  + R+    + F GRQ +   E W+R++T + FT +  +    EP  IY+ AT+      GG++    F  MGVPV +CS++R  + V+ +LG      AA+GGA  D C N   + ++ +  +M  VF+H                                      AL     + TRW   HA+ +R+L+L   ++ +F +  + R+L P EWQA+ E  SIL+    +  ++              + GR A                                  F+ ++I   A LH +   P+Q+IR                           P      + L P  + +L  + + ME+ GLGRA  + E +++ LDPR K CC + C++GG  L+      VS+Q   F       P   AGXXXXXXXXXXXXXXX            XXXX                   RL ++R  + +                                   +P   + R+    R E  EY+ E A   +   +L  YWR    D +D+ +G+VV  ARWPHL LVAR++AGID+TS Q ER+F       + L + V  L R  +   +IE++L +RLN H++P
Sbjct:  121 PMSAEDCLPHDRRFVLMCALQTLDPGSLCSDLGHRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGARAAGTANAILQDLCAGVRREVASALRAHSESCRRLGWSGPFVGLQVDSTGLPGGEGXXXXXXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRQMSHAKETWIRELTADLFTSICHKS---EPKDIYLAATIGGCSGGGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGC-----AAAGGAGEDKCANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAALARARGSTTRWTDSHALFERLLQLAGPLNAHFRQAPTDRSLQPSEWQAIRETASILEPALEVLAKVHAREEGXXXXXXXXEEGRRAAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGIFLAESIELHANLHCSFIYPLQDIRGDALATAATGEGVAAAPAMVAAGAGAAPFCSKRVAELTPEAQALLEAVAEGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRD-----PASEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----------------SRLDKMRQAQKMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEVDNRLSEDARAELEEYLLEPA---SKRHELLSYWRLHGTDTLDSGTGEVVLAARWPHLALVARLYAGIDSTSRQGERHFGGGSGGGAELGAAVRSLQRGGMPPWRIEQMLLVRLNRHVVP 900          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.570e-46
Identity = 162/538 (30.11%), Postives = 239/538 (44.42%), Query Frame = 1
Query:  562 QVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTR-------HLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE------DPVQEIRCLQPWDGPKKEV-------------SASTLQPHVRLVLTE-------LVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARR-------STIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLI 2046
            Q+T E F   +GE    EPS +++  TVDQGGN +N  T +GV V  C+ HR  + V WALGI+G+       A +C N     L+ K+  + GVF  S  NN  LKE+Q    +L +  +L+ RNDT   SQ  M+ R+L L   I EYF R          +R L   EW    E+ S+L D + I  + +QG +   + QA+    ++H  +E       P++    +     P  +V               ST   HV  + TE       L++ ME++G+G+A    ER++  LDPR K        NG E L+ A   D+      F   + P                        P+PA A             P   V    PA +  + +RI                  +  P    T     + RE   Y+AE    +   F+L  +W  R  + V   +GKV  PA  P+L  +AR+  GI+ TSCQAERNFS+L  ++  LR ++ A K+E+++ +RLN HL+
Sbjct:    6 QLTKEYFGGFMGES--VEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGS-------ATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIR-IQGAQDTHISQAM---FLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVP------------------------PTPAPA-------------PVVDVQPAEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQTPVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 7.010e-17
Identity = 76/262 (29.01%), Postives = 119/262 (45.42%), Query Frame = 1
Query: 1297 KQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLA-----RIRAKK-NLLVARRSTIPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKV 2064
            ++ +KR +G    + E + L  DPR K   + VC  GGE  Q+   + +S   +    +  P   GAA                  P PA A                   TP P +  R+A     R +A+K     A R++      +  D   +E  EY    A     ++D+  +WR      +D  G VV  A++P L ++ARV+  ID+TSCQ+ER FS L  V ++LR ++  +++E ++FLR N HLIP + K+
Sbjct:   41 EEFKKRNIGTPVEDVEFLALFFDPRSKDFGKGVC--GGEGGQEKALEALSTVSMNLVDTVEPG--GAA----------------DVPVPAAA-------------------TPPPEKRARVATTAYERRQARKVQEAAAARTSARRDQPSVTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKL 263          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 3.430e-16
Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 1747 REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELES 2082
            RE   Y+AE       +F++  +W  R  D V   +G V  PA  P+L  +AR+F GI+ +SCQAERNFS+L  ++  LR ++ + K+E+++ +RLN HL+      VREL++
Sbjct:  129 REVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDE----VRELDA 237          
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.210e-14
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1747 REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVREL-ESLKEERDGAAGAAFI 2124
            +E  EY    A     ++D+  +WR      +D  G VV  A++P L ++ARV+  ID+TSCQ+ER FS L  V ++LR ++  +++E ++FLR N HLIP + K+   L + L  +  G A AA +
Sbjct:  160 KEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKLDNGLGKLLAAQAVGKAKAASV 286          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JTB8_9PHAE8.760e-9832.29Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.150e-9632.48Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JRT6_9PHAE4.590e-8731.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ52_9PHAE4.610e-8632.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KAN7_9PHAE1.280e-6035.19Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D7G031_ECTSI1.160e-5127.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KDJ6_9PHAE2.570e-4630.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L256_9PHAE7.010e-1729.01Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A6H5KJT6_9PHAE3.430e-1638.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L902_9PHAE1.210e-1437.01Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig753contigF-serratus_M_contig753:112766..117501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2551
Cds size2094
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig753.18795.1prot_F-serratus_M_contig753.18795.1Fucus serratus malepolypeptideF-serratus_M_contig753 113154..117432 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932272.0989823-UTR-F-serratus_M_contig753:112765..1131531622932272.0989823-UTR-F-serratus_M_contig753:112765..113153Fucus serratus maleUTRF-serratus_M_contig753 112766..113153 -
1690964228.7287164-UTR-F-serratus_M_contig753:112765..1131531690964228.7287164-UTR-F-serratus_M_contig753:112765..113153Fucus serratus maleUTRF-serratus_M_contig753 112766..113153 -
1622932272.1957934-UTR-F-serratus_M_contig753:117432..1175011622932272.1957934-UTR-F-serratus_M_contig753:117432..117501Fucus serratus maleUTRF-serratus_M_contig753 117433..117501 -
1690964228.8028498-UTR-F-serratus_M_contig753:117432..1175011690964228.8028498-UTR-F-serratus_M_contig753:117432..117501Fucus serratus maleUTRF-serratus_M_contig753 117433..117501 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932272.113847-CDS-F-serratus_M_contig753:113153..1143691622932272.113847-CDS-F-serratus_M_contig753:113153..114369Fucus serratus maleCDSF-serratus_M_contig753 113154..114369 -
1690964228.746024-CDS-F-serratus_M_contig753:113153..1143691690964228.746024-CDS-F-serratus_M_contig753:113153..114369Fucus serratus maleCDSF-serratus_M_contig753 113154..114369 -
1622932272.1339612-CDS-F-serratus_M_contig753:114699..1150821622932272.1339612-CDS-F-serratus_M_contig753:114699..115082Fucus serratus maleCDSF-serratus_M_contig753 114700..115082 -
1690964228.7581367-CDS-F-serratus_M_contig753:114699..1150821690964228.7581367-CDS-F-serratus_M_contig753:114699..115082Fucus serratus maleCDSF-serratus_M_contig753 114700..115082 -
1622932272.1577654-CDS-F-serratus_M_contig753:115312..1157941622932272.1577654-CDS-F-serratus_M_contig753:115312..115794Fucus serratus maleCDSF-serratus_M_contig753 115313..115794 -
1690964228.7754304-CDS-F-serratus_M_contig753:115312..1157941690964228.7754304-CDS-F-serratus_M_contig753:115312..115794Fucus serratus maleCDSF-serratus_M_contig753 115313..115794 -
1622932272.1764038-CDS-F-serratus_M_contig753:117419..1174321622932272.1764038-CDS-F-serratus_M_contig753:117419..117432Fucus serratus maleCDSF-serratus_M_contig753 117420..117432 -
1690964228.7912612-CDS-F-serratus_M_contig753:117419..1174321690964228.7912612-CDS-F-serratus_M_contig753:117419..117432Fucus serratus maleCDSF-serratus_M_contig753 117420..117432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig753.18795.1

>prot_F-serratus_M_contig753.18795.1 ID=prot_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=polypeptide|length=698bp
MDASGVEPPSKRGTPLDLLQCPLSATEKEEQTRRYVAMCAVDLHPFSMLN
SAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYES
VKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAF
PGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMN
TFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLI
SKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAM
LQRVLRLYPAIHEYFTRHLSRRALFPLEWQAVLELVSILDDPARINKQMV
QGGRHAFVGQAINDFAILHAALEDPVQEIRCLQPWDGPKKEVSASTLQPH
VRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQL
QQAVRDDVSAQFLAFDGSARPRPVGAAGAGGGAAGADGPFAPFSAPSPAG
ASAGQTGAGGGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRSTIPSA
SETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEP
ARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKIL
FLRLNSHLIPGLGKVVRELESLKEERDGAAGAAFIAKTTDVANNIAL*
back to top

mRNA from alignment at F-serratus_M_contig753:112766..117501-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig753.18795.1 ID=mRNA_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=mRNA|length=4736bp|location=Sequence derived from alignment at F-serratus_M_contig753:112766..117501- (Fucus serratus male)
CACCCAGCGGAGCACAAAGCAGCTCTCAAGGACAGCAGGCACACCTCAGA AGGGAAAGCAAAGCGCGCGATGGATGCTTCAGGTAAGGGAGCGATGGGAA GACTTGAATACGGCACAGCGTGTAGGTGTGAAGCGATTGTGGGTTGTGTC TGTCTTTCCCGTTCCGAGCTGTAGCTCCGGCTGGAGAGAGAAGGATTTTG TGATATCAGTCTCTCTGGACTTGAGTACAGCAGTACTTGCAGCGGTACTT TTCGTACTCCTACGAAGTATAAACGAAGTATGATATAACGAAGTACCGCG TATACTACAGCGTATAACGTAGTTTGAATTTAGGTACGGTACGGTACGGT ACGGTACGGTACGGTACGGTACGGTACTACTTCATAGTACTTCGTAGCAC TGCTGTACATTCCTCGTGCACACTCTGAATGCACCTATTAAAGACCTTCT GCGCCCCCGGTAGGGGGGAAAAAATCAAAACGTTTAGGTGGTATCAAAGG CTGCAAATACAAAACCTCTTCATGGCAATGCAGATAACATTGGGTCAACA GTAAAATGTCGGGGAGAAACCCACTACTGTCATACTGTACTCTTGACATT AATCGCCGTGCAGGGACACCAGAAAAACAGCAAAGACAAAACAGTAACAG TACATCATCAAACAGTAAAGACGAATCCAATACAACATGGAAACGGGAAC AGAGGACCATGGGGTGATGCGGAATCTTCACATCCAAGTGTACGACACCA TTCACCTGGAATTAGCCGAAGATCAGTGGGAGATCGATCGCACAAGGATC CAAGAGGCGAGCGAAAATAACTGGGTTCCTCGCTCAATACTTTTTAATAG TCAGGGCTACGACACACAGATGGTCCTCATACATGGACTTAGCGATGGTC CCGCGGTGACCATAAGCAACAAGAGGAAGAAGCATCTGTCTCATCAAAAA TGACTGAGTGCGCCTCCGAACAACCAACCGCTGTTGTTGTAATGTTGTAT GTACTCCCAAGTGTTTGAAGAAAATCTGAACGCACCTAAACCTTCTGATC AGTCAAAAGGTTTAGGTGGGAACATTGGCTGTAGGGACAAAAACCTCTAC ACACATGGTATTAAAAGGGTTCCCCAATGTAGTTACATAAGATAAGGTCA ACAGTATAATATCGAGAAGCCCACCGTTATACTGTTGTACACTGACATTA TTTGCCATGTAGCGACACCAAAATACAAAACCAAGAGCAATATCAGACCA GGTATACAATATTTTTGGACTAAAGAGTAATAGTCTACCGTACAGTAATA TGGTATTGGTGTTTATTGTTTCGATGCGAGGGTCATAGATATATAGGGCC TCAAATTTACAATATGCCCTTTAAAAATGTTGTTGCTCAAATGAAATGAT ATCACATACTTCGAAGTGCTTCAGTAATTGTGTGTGTGTGTGTGTGTCGG TATCCAGAGGGGAATGCAATTTACATGTTCGTGGGAAACTAGCCTCTATC GTCTGACCCTTGCCTTGACCCTTCGGATGTAACCACACGCCGCGGAGCAG ACTGCTGTATAATGTTTCATGAAAATTCATTACCGGTACGAAGTAACAGT AGTATACCCGTTCACTCATGTCATGGCGCGTTTCGTTTCATTTTGTCCTT CGTCTCGTACCTCGTATTTTTTGTATCGTGTCTTGCGTGCGTTCAATGTC TCTTTAGGGGTCGAACCTCCATCGAAGAGGGGGACACCACTAGACCTGTT GCAATGCCCGCTTAGCGCGACGGAGAAGGAGGAGCAAACTCGGCGCTATG TTGCGATGTGCGCCGTCGACTTGCACCCGTTTAGCATGCTCAACTCTGCT GCATTCCAGTGGTACCTCGGCGGATACTCGCCCTCCTTCATCACGGAGAA GCCTCATCACACGACAATCAACCGCCATCTCGACGAGTTATGCTCAGGTG TACGAGACGGCATTACGGCGCAGCTCGTCGCCCAGTACGAGTCTGTGAAG AAGGTGGGGTGGACCGGCCCCTGGGTGAGCATCCAGGTCGACGTAACAAG CACGCACAGCACGGAGTTCGTCACCGTGAGCTTCGCCTGGATCTCCCCTG ATTGGATGAGGATGGAACGAGTGAACTACTGCACCAAGGCGTTCCCTGGC AGGCAAAGTGCTGACGAGATCGAACCGTGGCTCCGACAGGTTGGTATTTT GAGTTCCAACTTTCTTGTCGTACTTTATTTTTTAGATGATGTATCTGCCG TTGGCAGCACAGCAGCAGCAGTTTCATGTTGTATACTAGGCAGGAAATGG TGACCCTGCTTGATCTTTGCTTGTCGTTAGCGCTAATTCCAGCTTATCTC TACACAATGGCTCCGCGTTTGGCCCACTGCTGTAACCCCATCGATGTTGT ATATCCCCATGTGATGCAGGTTACCATTGAAGCTTTCACGCCTGTTTTGG GTGAGGGAAATCCCTGTGAGCCCAGTGCCATCTACGTCGGGGCCACGGTC GATCAAGGGGGCAACACGATGAACACATTCACGCGCATGGGAGTGCCCGT CGGGATCTGCTCCGCTCATCGGGGAGGCACGTGTGTCACTTGGGCGCTGG GGATCTCCGGGACGGATAGAGCGGCCAGCGGGGGGGCTGACTCGTGCATG AACCTGGGTTGTAAGAAACTTATAAGCAAGGTGACGACTATGGCGGGGGT TTTCAAGCACAGCGTAGGCAACAACGACGAGCTGAAGGAGATTCAGCTCG AGGTCCTCGAGCTGGACCAGGCCTTGGACCTGGTTCTTCGCAACGACACG AGGTACGAAGGACACTCTTGCCTTGTTGACAAAGGAAGCATGTTGGCGAT GGATGTGCCACTTTGTAGCTGCATGAATGAGACCCACAGCTTGGGGTCTT GGCTGCAACTTGAGTTTATCATTTCGACGCACACACGAGTGATCATTACA TTAAAACACCGATTCTTGTTTTTGGCGAGTTGTTGTTGGAGACACAGTTT GCACCGTGGGCCCCATCTATAGTTCATACCTTTCATACCTCTACACAGTA GCGGAGAAGAGTTGGGCAAAATAGTTTACCCTCTTGCCCACCCGCCCGCC CGTCTTTCCTTCTTTTTTTTTTTTTTTTTAAGGTGGGGGTCGCAGCATGC AATGTTGCAGCGTGTACTCCGACTCTACCCGGCCATCCACGAGTACTTCA CGCGACACCTGAGCCGCCGTGCGCTGTTCCCGCTGGAGTGGCAAGCGGTG CTGGAGTTGGTCAGCATCCTCGATGACCCCGCTAGAATAAATAAGCAGAT GGTCCAGGGGGGGCGTCATGCGTTTGTGGGCCAGGCCATCAACGACTTCG CCATCCTGCACGCCGCGTTGGAGGATCCCGTCCAGGAGATCCGGTGCCTG CAACCTTGGGATGGCCCCAAGAAAGAGGTCTCCGCCTCCACGCTCCAACC ACACGTTAGGCTGGTGCTGACGGAGTTGGTGAAGCAGATGGAGAAGAGGG GTCTGGGACGTGCCACGACGGAGGCCGAGCGGATCAATTTGGCGCTTGAT CCTCGTTTGAAGTCCTGCTGTGAAGCCGTCTGCCTTAACGGCGGCGAACA GCTGCAGCAAGCAGTGCGCGATGACGTGTCGGCGCAGTTCCTGGCTTTCG ATGGGTCTGCCCGGCCACGCCCGGTGGGTGCGGCGGGGGCTGGGGGGGGT GCAGCAGGCGCGGACGGGCCCTTCGCGCCTTTCTCCGCCCCTTCCCCTGC CGGTGCGTCTGCAGGGCAAACGGGGGCTGGCGGAGGTGCTGCAGACCCGT CCACTACTGTGCCCACGCCTGTCCCTGCGCGCCCGGATAGGCTGGCAAGG ATAAGAGCAAAAAAGAACCTGCTTGTCGCTCGCCGGAGCACCATCCCTAG CGCATCCGAGACTCGCATGGACGCCGGACTTCGCGAATTTAGCGAGTACA TGGCAGAGGCGGCTTTCGCGAACAACTCCGAGTTCGACCTTTTCGAGTAC TGGAGAGCGCGGGCCGTTGATGGGGTCGATGCGTCAGGAAAGGTTGTCGA GCCTGCCCGCTGGCCGCATTTGGGTTTGGTAGCGCGGGTGTTCGCAGGAA TCGACACAACGAGCTGCCAGGCAGAGAGGAATTTTTCCTCCCTTAAGTCG GTTGTGAGCGACCTCCGCGCTAGTCTGGGAGCTGAAAAGATCGAGAAGAT TTTGTTCCTCAGACTCAATAGCCACCTTATTCCTGGATTGGGTAAGGTTG TGAGAGAGTTGGAAAGCTTGAAGGAAGAGCGCGACGGAGCTGCTGGCGCA GCATTTATTGCCAAGACCACTGATGTAGCCAACAATATTGCGTTGTAGGT GGAACAGACGGACTCTTTTTATTGCCAAAACCACTGCTGTAGTCGGTATT GCGCTGTAGCTGGAACCGACGGACTTACTGGTGGAGTTGAGGTTGTCATT GGTGTTTTTTGTTTCCAGTGTTGTTGATTACTATGTTCGTTCGGACGTTA ACGGGAAAGGGAGAAGTGAATGTGGCTGGTTGGCAATTGGTAAAATGTAC CAGCACTTCTTTCGTTTCGCCTTTTTGGAGGGGGGTTGGAAGATCGTTTA TGGATACAGCTGTAAAAAAATGTACCAGGTAGTTACAGAGGATTGGTTCA TTTTGCAGGACGAGGGGTCGCAAGCAAGTACCTTCATATTCATATCTATC GAAGGCAGCCGATATTATTTGTTAAATGCATGTCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig753:112766..117501-

>mRNA_F-serratus_M_contig753.18795.1 ID=mRNA_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=CDS|length=4188bp|location=Sequence derived from alignment at F-serratus_M_contig753:112766..117501- (Fucus serratus male)
ATGGATGCTTCAGATGGATGCTTCAGGGGTCGAACCTCCATCGAAGAGGG
GGACACCACTAGACCTGTTGCAATGCCCGCTTAGCGCGACGGAGAAGGAG
GAGCAAACTCGGCGCTATGTTGCGATGTGCGCCGTCGACTTGCACCCGTT
TAGCATGCTCAACTCTGCTGCATTCCAGTGGTACCTCGGCGGATACTCGC
CCTCCTTCATCACGGAGAAGCCTCATCACACGACAATCAACCGCCATCTC
GACGAGTTATGCTCAGGTGTACGAGACGGCATTACGGCGCAGCTCGTCGC
CCAGTACGAGTCTGTGAAGAAGGTGGGGTGGACCGGCCCCTGGGTGAGCA
TCCAGGTCGACGTAACAAGCACGCACAGCACGGAGTTCGTCACCGTGAGC
TTCGCCTGGATCTCCCCTGATTGGATGAGGATGGAACGAGTGAACTACTG
CACCAAGGCGTTCCCTGGCAGGCAAAGTGCTGACGAGATCGAACCGTGGC
TCCGACAGGGGTCGAACCTCCATCGAAGAGGGGGACACCACTAGACCTGT
TGCAATGCCCGCTTAGCGCGACGGAGAAGGAGGAGCAAACTCGGCGCTAT
GTTGCGATGTGCGCCGTCGACTTGCACCCGTTTAGCATGCTCAACTCTGC
TGCATTCCAGTGGTACCTCGGCGGATACTCGCCCTCCTTCATCACGGAGA
AGCCTCATCACACGACAATCAACCGCCATCTCGACGAGTTATGCTCAGGT
GTACGAGACGGCATTACGGCGCAGCTCGTCGCCCAGTACGAGTCTGTGAA
GAAGGTGGGGTGGACCGGCCCCTGGGTGAGCATCCAGGTCGACGTAACAA
GCACGCACAGCACGGAGTTCGTCACCGTGAGCTTCGCCTGGATCTCCCCT
GATTGGATGAGGATGGAACGAGTGAACTACTGCACCAAGGCGTTCCCTGG
CAGGCAAAGTGCTGACGAGATCGAACCGTGGCTCCGACAGGTTACCATTG
AAGCTTTCACGCCTGTTTTGGGTGAGGGAAATCCCTGTGAGCCCAGTGCC
ATCTACGTCGGGGCCACGGTCGATCAAGGGGGCAACACGATGAACACATT
CACGCGCATGGGAGTGCCCGTCGGGATCTGCTCCGCTCATCGGGGAGGCA
CGTGTGTCACTTGGGCGCTGGGGATCTCCGGGACGGATAGAGCGGCCAGC
GGGGGGGCTGACTCGTGCATGAACCTGGGTTGTAAGAAACTTATAAGCAA
GGTGACGACTATGGCGGGGGTTTTCAAGCACAGCGTAGGCAACAACGACG
AGCTGAAGGAGATTCAGCTCGAGGTCCTCGAGCTGGACCAGGCCTTGGAC
CTGGTTCTTCGCAACGACACGAGGTTACCATTGAAGCTTTCACGCCTGTT
TTGGGTGAGGGAAATCCCTGTGAGCCCAGTGCCATCTACGTCGGGGCCAC
GGTCGATCAAGGGGGCAACACGATGAACACATTCACGCGCATGGGAGTGC
CCGTCGGGATCTGCTCCGCTCATCGGGGAGGCACGTGTGTCACTTGGGCG
CTGGGGATCTCCGGGACGGATAGAGCGGCCAGCGGGGGGGCTGACTCGTG
CATGAACCTGGGTTGTAAGAAACTTATAAGCAAGGTGACGACTATGGCGG
GGGTTTTCAAGCACAGCGTAGGCAACAACGACGAGCTGAAGGAGATTCAG
CTCGAGGTCCTCGAGCTGGACCAGGCCTTGGACCTGGTTCTTCGCAACGA
CACGAGGTGGGGGTCGCAGCATGCAATGTTGCAGCGTGTACTCCGACTCT
ACCCGGCCATCCACGAGTACTTCACGCGACACCTGAGCCGCCGTGCGCTG
TTCCCGCTGGAGTGGCAAGCGGTGCTGGAGTTGGTCAGCATCCTCGATGA
CCCCGCTAGAATAAATAAGCAGATGGTCCAGGGGGGGCGTCATGCGTTTG
TGGGCCAGGCCATCAACGACTTCGCCATCCTGCACGCCGCGTTGGAGGAT
CCCGTCCAGGAGATCCGGTGCCTGCAACCTTGGGATGGCCCCAAGAAAGA
GGTCTCCGCCTCCACGCTCCAACCACACGTTAGGCTGGTGCTGACGGAGT
TGGTGAAGCAGATGGAGAAGAGGGGTCTGGGACGTGCCACGACGGAGGCC
GAGCGGATCAATTTGGCGCTTGATCCTCGTTTGAAGTCCTGCTGTGAAGC
CGTCTGCCTTAACGGCGGCGAACAGCTGCAGCAAGCAGTGCGCGATGACG
TGTCGGCGCAGTTCCTGGCTTTCGATGGGTCTGCCCGGCCACGCCCGGTG
GGTGCGGCGGGGGCTGGGGGGGGTGCAGCAGGCGCGGACGGGCCCTTCGC
GCCTTTCTCCGCCCCTTCCCCTGCCGGTGCGTCTGCAGGGCAAACGGGGG
CTGGCGGAGGTGCTGCAGACCCGTCCACTACTGTGCCCACGCCTGTCCCT
GCGCGCCCGGATAGGCTGGCAAGGATAAGAGCAAAAAAGAACCTGCTTGT
CGCTCGCCGGAGCACCATCCCTAGCGCATCCGAGACTCGCATGGACGCCG
GACTTCGCGAATTTAGCGAGTACATGGCAGAGGCGGCTTTCGCGAACAAC
TCCGAGTTCGACCTTTTCGAGTACTGGAGAGCGCGGGCCGTTGATGGGGT
CGATGCGTCAGGAAAGGTTGTCGAGCCTGCCCGCTGGCCGCATTTGGGTT
TGGTAGCGCGGGTGTTCGCAGGAATCGACACAACGAGCTGCCAGGCAGAG
AGGAATTTTTCCTCCCTTAAGTCGGTTGTGAGCGACCTCCGCGCTAGTCT
GGGAGCTGAAAAGATCGAGAAGATTTTGTTCCTCAGACTCAATAGCCACC
TTATTCCTGGATTGGGTAAGGTTGTGAGAGAGTTGGAAAGCTTGAAGGAA
GAGCGCGACGGAGCTGCTGGCGCAGCATTTATTGCCAAGACCACTGATGT
AGCCAACAATATTGCGTTGTAGGTGGGGGTCGCAGCATGCAATGTTGCAG
CGTGTACTCCGACTCTACCCGGCCATCCACGAGTACTTCACGCGACACCT
GAGCCGCCGTGCGCTGTTCCCGCTGGAGTGGCAAGCGGTGCTGGAGTTGG
TCAGCATCCTCGATGACCCCGCTAGAATAAATAAGCAGATGGTCCAGGGG
GGGCGTCATGCGTTTGTGGGCCAGGCCATCAACGACTTCGCCATCCTGCA
CGCCGCGTTGGAGGATCCCGTCCAGGAGATCCGGTGCCTGCAACCTTGGG
ATGGCCCCAAGAAAGAGGTCTCCGCCTCCACGCTCCAACCACACGTTAGG
CTGGTGCTGACGGAGTTGGTGAAGCAGATGGAGAAGAGGGGTCTGGGACG
TGCCACGACGGAGGCCGAGCGGATCAATTTGGCGCTTGATCCTCGTTTGA
AGTCCTGCTGTGAAGCCGTCTGCCTTAACGGCGGCGAACAGCTGCAGCAA
GCAGTGCGCGATGACGTGTCGGCGCAGTTCCTGGCTTTCGATGGGTCTGC
CCGGCCACGCCCGGTGGGTGCGGCGGGGGCTGGGGGGGGTGCAGCAGGCG
CGGACGGGCCCTTCGCGCCTTTCTCCGCCCCTTCCCCTGCCGGTGCGTCT
GCAGGGCAAACGGGGGCTGGCGGAGGTGCTGCAGACCCGTCCACTACTGT
GCCCACGCCTGTCCCTGCGCGCCCGGATAGGCTGGCAAGGATAAGAGCAA
AAAAGAACCTGCTTGTCGCTCGCCGGAGCACCATCCCTAGCGCATCCGAG
ACTCGCATGGACGCCGGACTTCGCGAATTTAGCGAGTACATGGCAGAGGC
GGCTTTCGCGAACAACTCCGAGTTCGACCTTTTCGAGTACTGGAGAGCGC
GGGCCGTTGATGGGGTCGATGCGTCAGGAAAGGTTGTCGAGCCTGCCCGC
TGGCCGCATTTGGGTTTGGTAGCGCGGGTGTTCGCAGGAATCGACACAAC
GAGCTGCCAGGCAGAGAGGAATTTTTCCTCCCTTAAGTCGGTTGTGAGCG
ACCTCCGCGCTAGTCTGGGAGCTGAAAAGATCGAGAAGATTTTGTTCCTC
AGACTCAATAGCCACCTTATTCCTGGATTGGGTAAGGTTGTGAGAGAGTT
GGAAAGCTTGAAGGAAGAGCGCGACGGAGCTGCTGGCGCAGCATTTATTG
CCAAGACCACTGATGTAGCCAACAATATTGCGTTGTAG
back to top