mRNA_F-serratus_M_contig752.18790.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig752.18790.1
Unique NamemRNA_F-serratus_M_contig752.18790.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: D8LGD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD8_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 4.850e-146
Identity = 233/438 (53.20%), Postives = 278/438 (63.47%), Query Frame = 3 
Query:  195 TFERVMRDSAGRIRLPSAPLSMSTILGVPTLDGGVAVDGK-------TSQRSRRGKYPVVELWRRPEMSPKDSLGDSDAGRHMEGCDDIF-----------------LGDRSRSPEGETALEYLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMGADPATVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGARRMIELSANRFVAEMVPGREMSDYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLVRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCR 1436
            T  +  R  A    LP+    + ++ G+P+ +               +  RSRRGKYPV+EL+RR   +   +  D+ AG                           +G R       TA+++LR  LGL S Q D + E+FP LA +DPD+  + AKLRF++HT+GA+  TVAVSFPQFFGHPLER IAPRHAFLV++GRPSG +LLE GCRG RRM+EL  NRFV EMVPGRE+SDYRRFE +FLRGPFDAARKGD  TLRLLRSHGWDCWETDRRGRTALFWAAG GSVEAC AL+EG+ GLR   + GDGSTPLHWA AGVETRRFGTGGHVN+CRWL+    D  A TSEGNTV+MWAAWAGG D T                                  +E    D++A N NGC+ AHWA+SGGD+AVCR
Sbjct:   77 TTRQRCRHHALHASLPTTTAGLPSLAGLPSANNXXXXXXXXXXXXXGSGGRSRRGKYPVIELYRRD--ADGSTTADTAAGIXXXXXXXXXXXXGLAGGSLPYGRRGGVGARRSVEPQATAVDHLRSVLGLASDQVDMMLESFPTLAHVDPDKLGLPAKLRFLRHTIGAEVRTVAVSFPQFFGHPLERLIAPRHAFLVSNGRPSGDRLLETGCRGLRRMLELPVNRFVVEMVPGREVSDYRRFEQAFLRGPFDAARKGDGETLRLLRSHGWDCWETDRRGRTALFWAAGGGSVEACKALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNVCRWLLDLGVDTKARTSEGNTVVMWAAWAGGLDATRWA------------------------------VEEAGALDVDAANANGCTVAHWASSGGDEAVCR 482
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A6H5KU03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU03_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 8.470e-134
Identity = 241/546 (44.14%), Postives = 284/546 (52.01%), Query Frame = 3 
Query:  195 TFERVMRDSAGRIRLPSAPLSMSTILGVPTLDGGVAVDGKTSQ-----------RSRRGKYPVVELWRRPEMSPKDSLGDSDAGRHMEGCDDIF----------------LGDRSRSPEGETALEYLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMGADPATVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGARRMIELSANRFVAEMVPGREMSDYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLVRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHSMGADFARVNRGGNNPLNHAVAYGRRHVAAWLLGEGSATGAVAPL--RRS-----------------------------DDPVLLDLARLTGDEVMQAFLQG 1658
            T  R  R  A    LP+    + ++ G+P+ +                      RSRRGKYPV+EL+RR       ++ D+ AG  + GCDD                   G R  +    TA+++LR  LGL S Q D + E+FP LA +DPD+  + AKLRF++HT+G +  TVAVSFPQFFGHPLER IAPRHAFLVA+GRPSGA                                                                WDCWETDRRGRTALFWAAG GSVEAC AL+EG+ GLR   + GDGSTPLHWA AGVETRRFGTGGHVN+CRWL+    D  A TSEGNTV+MWAAWAGG D T                                  +E    DL+A N NGC+ AHWA+SGGD+AVCRYLHS G DF R N+GGN+PLNHAVAYGRR++AAWLLGE  A     P    RS                             DDP LL+LARLTGDE MQAFL G
Sbjct:   33 TTRRRGRHRALHASLPTTTAGLPSLAGLPSANNNXXXXXXXXXXXXXXXXXXXGRSRRGKYPVIELYRRDPQG--STIADAAAGIDVGGCDDDDDDGLAGRRLPYGRRGEAGARRTAEPPATAVDHLRSVLGLASDQVDLMLESFPTLAHVDPDKLGLPAKLRFLRHTIGGEVRTVAVSFPQFFGHPLERLIAPRHAFLVANGRPSGAW---------------------------------------------------------------WDCWETDRRGRTALFWAAGGGSVEACEALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNVCRWLLNLGVDTKARTSEGNTVIMWAAWAGGLDATRWA------------------------------VEEAGALDLDAANANGCTVAHWASSGGDEAVCRYLHSKGVDFTRRNKGGNDPLNHAVAYGRRNIAAWLLGEIHAERETPPXXXHRSSYSSVKLPGVGDGSEAXXXXXXXXXXXXXDDPHLLELARLTGDEKMQAFLLG 483
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A7S0NRB7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NRB7_9EUKA)

HSP 1 Score: 194 bits (493), Expect = 8.620e-52
Identity = 138/363 (38.02%), Postives = 179/363 (49.31%), Query Frame = 3 
Query:  654 PQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGA-RRMIELSANRFVAEMV--------PGREMSDYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWD-CWETDRRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVETRR-------FGTGGHVNICRWLVRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYL-HSMGADFARVNRGGNNPLNHAVAYGRRHVAAWLLGEG-------SATGAVAPL--RRSDDPVLLDLARLTGDEVMQAFLQGR 1661
            PQ++  P E+ + PRHA+LVA G PSG +LL +  RG    ++   ++   AE V             +D+ RF  +F +G  DAAR GD   L  L +HG+D   + DRRG + L +AAG G V+ C+   E   GL     A DG+TPLHWA AG+ ++R       FGTGGH     WLV + ADP A T  GN+VL W AWAGG                             F    D    E+    + A+N  GCSAAHWAASGGD AVCR L  + G DF+  N  GN PL  A+ + R  V  WLL  G        A G  A L  R S D    +++     E+MQ++L  R
Sbjct:   16 PQYWSAP-EKSLIPRHAYLVARGLPSGRQLLLHEQRGLWTLLLRPKSDLQFAEAVCTYGAASSADAVSADFGRFARTFRKGGLDAARAGDVSVLTALETHGYDPASDRDRRGASVLHYAAGHGHVDCCAWACE-HGGLGVDDRASDGATPLHWAVAGMRSQRSSGMSSGFGTGGHQRAASWLVDRGADPRACTHVGNSVLHWCAWAGG--------------------------QQAFEWLADHLGAED---GMHALNSKGCSAAHWAASGGDLAVCRLLAETRGVDFSAPNLEGNTPLTKAIEHQRAPVVQWLLESGRCGAAVTDAAGYAARLAARHSADATTNEIS-----ELMQSYLLAR 342
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: K0RR31_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RR31_THAOC)

HSP 1 Score: 182 bits (463), Expect = 3.750e-46
Identity = 140/420 (33.33%), Postives = 188/420 (44.76%), Query Frame = 3 
Query:  480 ALEYLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMGADPATVAVSF--------PQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGARRMIELSAN-----RFVAEMVPGREMSDYRR-------------FETSFLRGPFDAARK--------GD-------------------AMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIE--GDRGLRAHT---AAGDGSTPLHWAAAGVETRRFGTGGHVNICRWL-------VRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHSMGA-DFARVNRGGNNPLNHAVAYGRRHVAAWL 1541
            A++YL    G    + DA++  FP L ++D  R  +R K+RF++  MG    +  +          P FFG  LER +APRHAFLV  G P G +L +        + E  A      +F A     R      R             F+  F RG   AAR+        G+                   A  +R L   G + +ETD RG +   WAAG G++E    L+   GD+G +A     A+ D +TPLHWAAAG   + FG GGH+++C ++       + QR    + T +GN+VLMWAAW+   DV  +                         RS         RAD    N NGC+ AHWAASGGD  VC+YLH +   DF   N   N PL+HAVAYGR  V  WL
Sbjct:  177 AIQYLHTHGGYALDEIDALRSRFPPLLEMDVVRH-LRPKMRFLKDCMGGGHGSDQILNKKLRTQLPPGFFGSRLERTVAPRHAFLVHVGLPFGKELWDGEAGDGALLGEFIAQHRKPKQFAALCNRWRSTYGSNRISNLPITSEQVVAFDKLFQRGILSAAREDFGYVHSGGEKSEKNGALPTLLETANTTAAQLVRYLLQAGANPYETDVRGASLFHWAAGCGNLEGLRELVSACGDKGRKAALLWMASRDDATPLHWAAAGAGPKSFGIGGHLSVCNYILSIGEDIIPQRKLINSQTRDGNSVLMWAAWSRSLDVVKM-----------------------LVRS---------RADTAMSNRNGCTVAHWAASGGDLEVCKYLHGIACVDFTVENYARNTPLSHAVAYGRYDVVKWL 563
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A1Z5K8B8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B8_FISSO)

HSP 1 Score: 177 bits (449), Expect = 3.690e-45
Identity = 132/395 (33.42%), Postives = 183/395 (46.33%), Query Frame = 3 
Query:  483 LEYLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMG-ADPATVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGAKLLENG----------CRGARRMIELSANRFVAEMVPGREMSDYRR---FETSFLRGPFDAARKG--------------------DAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEGDRGLRAH-TAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLVR------QRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHS-MGADFARVNRGGNNPLNHAVAYGRRHVAAWL 1541
            + YL+   G  + Q   + ++FP L  +   +  V  K+ F++HT+G +DP+ V +  P ++G  LE+ +APRHAFLV    P G +L               R A+    L   R+  +    +    +++   F+T F RG   AAR                       A  + LL  HG +  E D +G T L WA+G G  E    LI    GL    TAA DG+TPLHW+AAG   R FGT GH ++C +L++      Q A     T +GN+ LMWA+W+G      +             +A   A +   T                  N NGC+ AHWAASGG+  VCRYLH  +  DF+  N GGN PL HAVA+GR  V  WL
Sbjct:   84 VTYLKDYGGYTTEQIFQMNQSFPPLLTLSVQQ-QVHPKMEFLRHTLGISDPSQVDLP-PYYWGARLEKILAPRHAFLVHHRLPHGPELFRANSTLFLDFMLHARNAKSFAAL-CQRWQQQYTTTQAQFTHQKVEAFDTLFGRGLMAAARNEWHQNCYNNSTTWALQHNAPTAAQLIDLLYQHGANLHERDYQGATLLHWASGTGYFEGVEMLIR--LGLSVQDTAARDGATPLHWSAAGTTAREFGTFGHPDVCDYLIQRIPEQQQLAYVNQCTKDGNSPLMWASWSGTLKTVKL-------------LASYGAQAQNVT------------------NRNGCTVAHWAASGGNVDVCRYLHEVLRVDFSVSNHGGNTPLTHAVAFGRSEVVKWL 442
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A7S3PXD8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXD8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.660e-45
Identity = 138/431 (32.02%), Postives = 190/431 (44.08%), Query Frame = 3 
Query:  489 YLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTM---GADPATVAVSF-------------PQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGARRMIELSANR---FVA--------------------------EMVPGREMSDY------RRFETSFLRGPFDAARKG--------------DAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEGDRG-------LRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLVRQRADPCAT-------TSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHS-MGADFARVNRGGNNPLNHAVAYGRRHVAAWL 1541
            YL++  G    + D + E+FP L  +D  R  +R KLRF+++T+    AD    + S              PQ+FG  +E+ +AP+HAFL+  G P G  LL+N     R  + LS  R   F A                          E++P    ++         F+  F RG   A+R                 +  + LL  HG +  E D R  + L W+AGAG + +   LI    G       LRA     DG++ LHWAAAG E + FG GGH+N+C++L+     P A        T +GN++LMWAAW+G  DV  +    VV                              RAD    N NGC+ AHWA SGG+  +C+YL   M  DF   N  GN PL+HA+AYGR  VA WL
Sbjct:  122 YLKEYAGFMDHEIDTMSESFPPLLDLDVKRH-LRPKLRFLKYTLQGLAADSNLTSESKGPLILSKIAKRVPPQYFGSRMEKVVAPKHAFLMHMGLPHGKALLDNDAELFRDFL-LSCRRTKTFAALCNEWRRAYGKCEDEGYQHLLMEEGIEIIPSDRPNELITPKKIDAFDGLFARGILAASRNDMDPQNQHLQHMNVTASQMIYLLTKHGSNPLERDVRDISLLHWSAGAGELGSLRQLIAALPGGMEEAVRLRADR---DGASILHWAAAGSEAKAFGCGGHINVCKYLMENCGGPSAQKEVVNGLTKDGNSILMWAAWSGSLDVVKL----VVRH----------------------------RADPLVKNRNGCTVAHWACSGGNLELCKYLEEVMDLDFTEGNNAGNTPLSHAIAYGRLDVAQWL 515
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A0M0JUH1_9EUKA (Ankyrin repeat protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUH1_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 1.850e-42
Identity = 107/288 (37.15%), Postives = 147/288 (51.04%), Query Frame = 3 
Query:  834 DYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWDCWET--DRRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVETRR--------------------------FGTGGHVNICRWLVRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLD--------TPTKEETRAD----LEAVNGNGCSAAHWAASGGDDAVCRYL-HSMGADFARVNRGGNNPLNHAVAYGRRHVAAWLLGEGSATGAVA 1574
            D+  F + F +G FDAAR GD   L  L +HGW C  T  D+RG +AL +AAG G VE C+ L     GL     A DG+TPLHWA AG+ +R                           FGTGGH+ + +WLV + AD  A T +GN++L W AWAG  +V +     + +  R +Q +    +    + + D        +P+K + R      + A+N NGCSAAHWAASGG   VC++L   +  DF+  N  GN PL  A+ +GR  +  WLL  GS    +A
Sbjct:    5 DFASFASRFRKGGFDAARAGDTAVLEALLAHGW-CARTARDKRGASALHYAAGHGHVECCALLCAA--GLEVDDRAQDGATPLHWAVAGMTSRGNPRDRAHDGAPRADDRQGRDSAGPNGFGTGGHLGMAKWLVGRGADVGAQTVDGNSILHWCAWAGTLEVLT----WLTDHIRQLQRSGLAMHGGGTSTTSDGSCSLSGASPSKLDKRMSDSLSVHALNRNGCSAAHWAASGGGLEVCQWLAEELELDFSLPNLEGNTPLTKAIEHGREEIVRWLLVSGSCEPTLA 285
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: A0A7S2XKC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKC8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.730e-42
Identity = 138/438 (31.51%), Postives = 195/438 (44.52%), Query Frame = 3 
Query:  489 YLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHT---------------MGAD---PATVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGAKLLE------NGCRGARRMIELSANRFVAEMVPGREM-------SDYRR----------------------------FETSFLRGPFDAARK----------------GDAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALI----EGDRGLRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLV-------RQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHSM-GADFARVNRGGNNPLNHAVAYGRRHVAAWL 1541
            +L +  G    +   +   FP L  +D  R  ++ KL F+++T               MG +   P T  +  PQ+FG  LER IAPRHAFL+    P G  LL+      N    +  + +   + F   ++  R+M       +++RR                            F+  F RG   AAR                 GD   +RLL +HG +  E D RG + + WAAGAG+++  +ALI    E        TA  DG+TPLHWAAAG + + FG+GGH +IC++L+       RQ  +    T +GN+VLMWAAW+G     ++P   ++ R R                           AD    N NGC+ AHWA SGG+  VC+YL  + G DF   N  GN PL+HAVAY R  +  WL
Sbjct:  144 FLAEQGGYSLDEVLEMNRTFPPLLDLDVQRH-LQPKLLFLKYTLQQSQALSLSSRKKVMGKEILSPETRKILPPQYFGARLERTIAPRHAFLMYKNLPHGTALLKALEQNTNDAAESSSVTDRPPSLFSEFLISSRKMKQFCALCNNWRRTYGEMSSNGSGITTIDQHNIISPKEVEAFDVIFQRGLMAAARNEIDPSNQYIKYINITSGDM--IRLLVNHGANPLERDVRGVSLIHWAAGAGNLQGLNALIDMWPETSSSCNNLTATRDGATPLHWAAAGAKAQEFGSGGHEHICQYLLNLPNCNARQLVNQL--TKDGNSVLMWAAWSG-----TLPVVKLLIRHR---------------------------ADSTVANRNGCTVAHWAVSGGNLEVCKYLAEVVGVDFTITNYTGNTPLSHAVAYSRVDIIQWL 544
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: B7FSM1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSM1_PHATC)

HSP 1 Score: 128 bits (321), Expect = 1.180e-27
Identity = 99/313 (31.63%), Postives = 135/313 (43.13%), Query Frame = 3 
Query:  474 ETALEYLRKALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMGADPATVAVSFPQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGA----RRMIELSANRFVAEMVPGREMSDY----------------------------RRFETSFLRGPFDAARKG----------------DAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEG-DRGLRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWLVRQ--RADPCAT-----TSEGNTVLMWAAWAGGFDVTSV 1244
            E  L YL    G    Q   + + FP L  +   R  +R K+RF++ T+G    T     PQ+FG  LER +APRHAFL     P G +L +     A     +   +  +R  + +V GR+   +                              F+  F RG   AAR                   A   +LL  HG    E D RG T L WAAG G++     L+    +G+R  T   D +TPLHWAAAGV  R FGTGG V +C+WL+ Q   +D         T +GN+ LMWA+W+G  D   +
Sbjct:  123 EDPLSYLVHEGGYTRDQVIIMNQTFPPLLSLSVSR-QLRPKMRFLKETLGLLHPTSINLPPQYFGARLERTLAPRHAFLAFHKLPHGPQLWQEDPAAAAVVHNQTTTVQPSRLSSFLVAGRKTKRFAALCQKWQQEKIMDCNEVQHPPITDKQIEAFDVLFGRGLMAAARNDLVQWNNTWPLDYINVTSAELTQLLIDHGAPPLERDHRGATLLHWAAGVGNLPGVQTLLPHFPQGVRVTTKR-DHATPLHWAAAGVNAREFGTGGSVKVCQWLLTQIETSDEVKRYVNQQTRDGNSPLMWASWSGTLDTVKL 433
[Close]
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Match: B8C1U3_THAPS (Inversion protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1U3_THAPS)

HSP 1 Score: 115 bits (289), Expect = 7.100e-25
Identity = 86/284 (30.28%), Postives = 122/284 (42.96%), Query Frame = 3 
Query:  738 KLLENGCRGARRMIELSANRFVAEMVPGRE--MSDYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWDCWETDRRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVETRRFGTGGHVNICRWL----------VRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPYGGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAHWAASGGDDAVCRYLHSMG-ADFARVNRGGNNPLNHAVAYGRRHVAAWLLGE 1550
            KL + G   A R  + SA+ F  ++  G +   +++   + S ++     A    A  +R L  HG + +E D RG +   W+AG G+++   AL++              S P          ++FG GGH  +C +L          + +R    A T + NT+LMWAAW+   DV  +                                    RA     N NGC+ AHWAASGG   VC+YLH M   DF   N  GN PL+HAVAYGR  V  WL+ E
Sbjct:   31 KLFQRGLLSAAR--DDSAHVFTGDVKEGNKGTKANHSTSQPSLMQ----TANVTSAQLVRYLIQHGGNPYEEDVRGASLFHWSAGCGNLDGLRALVQS-------------SAP----------KQFGIGGHPAVCAYLSSLCTQQSQILSERKLINAQTKDKNTILMWAAWSRSLDVVKLLV--------------------------------RNRATTTCCNRNGCTVAHWAASGGSLEVCKYLHQMAKVDFDVENYAGNTPLSHAVAYGRVDVVRWLIEE 253
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig752.18790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LGD8_ECTSI4.850e-14653.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU03_9PHAE8.470e-13444.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0NRB7_9EUKA8.620e-5238.02Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
K0RR31_THAOC3.750e-4633.33Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5K8B8_FISSO3.690e-4533.42Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3PXD8_9STRA6.660e-4532.02Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0M0JUH1_9EUKA1.850e-4237.15Ankyrin repeat protein (Fragment) n=1 Tax=Chrysoch... [more]
A0A7S2XKC8_9STRA6.730e-4231.51Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
B7FSM1_PHATC1.180e-2731.63Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8C1U3_THAPS7.100e-2530.28Inversion protein (Fragment) n=1 Tax=Thalassiosira... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig752contigF-serratus_M_contig752:326504..336938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score443.4
Seed ortholog evalue1.6e-121
Seed eggNOG ortholog2880.D8LGD8
Preferred nameANKRD16
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
EC2.3.1.225
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Exons9
Model size1897
Cds size1614
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932271.043634-UTR-F-serratus_M_contig752:326503..3265531622932271.043634-UTR-F-serratus_M_contig752:326503..326553Fucus serratus maleUTRF-serratus_M_contig752 326504..326553 +
1690964228.201567-UTR-F-serratus_M_contig752:326503..3265531690964228.201567-UTR-F-serratus_M_contig752:326503..326553Fucus serratus maleUTRF-serratus_M_contig752 326504..326553 +
1622932271.2370136-UTR-F-serratus_M_contig752:336705..3369381622932271.2370136-UTR-F-serratus_M_contig752:336705..336938Fucus serratus maleUTRF-serratus_M_contig752 336706..336938 +
1690964228.3233194-UTR-F-serratus_M_contig752:336705..3369381690964228.3233194-UTR-F-serratus_M_contig752:336705..336938Fucus serratus maleUTRF-serratus_M_contig752 336706..336938 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932271.0595138-CDS-F-serratus_M_contig752:326553..3271021622932271.0595138-CDS-F-serratus_M_contig752:326553..327102Fucus serratus maleCDSF-serratus_M_contig752 326554..327102 +
1690964228.2139878-CDS-F-serratus_M_contig752:326553..3271021690964228.2139878-CDS-F-serratus_M_contig752:326553..327102Fucus serratus maleCDSF-serratus_M_contig752 326554..327102 +
1622932271.0776205-CDS-F-serratus_M_contig752:328276..3284091622932271.0776205-CDS-F-serratus_M_contig752:328276..328409Fucus serratus maleCDSF-serratus_M_contig752 328277..328409 +
1690964228.2320704-CDS-F-serratus_M_contig752:328276..3284091690964228.2320704-CDS-F-serratus_M_contig752:328276..328409Fucus serratus maleCDSF-serratus_M_contig752 328277..328409 +
1622932271.093167-CDS-F-serratus_M_contig752:333224..3332881622932271.093167-CDS-F-serratus_M_contig752:333224..333288Fucus serratus maleCDSF-serratus_M_contig752 333225..333288 +
1690964228.2438507-CDS-F-serratus_M_contig752:333224..3332881690964228.2438507-CDS-F-serratus_M_contig752:333224..333288Fucus serratus maleCDSF-serratus_M_contig752 333225..333288 +
1622932271.111926-CDS-F-serratus_M_contig752:333473..3336051622932271.111926-CDS-F-serratus_M_contig752:333473..333605Fucus serratus maleCDSF-serratus_M_contig752 333474..333605 +
1690964228.2551312-CDS-F-serratus_M_contig752:333473..3336051690964228.2551312-CDS-F-serratus_M_contig752:333473..333605Fucus serratus maleCDSF-serratus_M_contig752 333474..333605 +
1622932271.127194-CDS-F-serratus_M_contig752:335302..3355071622932271.127194-CDS-F-serratus_M_contig752:335302..335507Fucus serratus maleCDSF-serratus_M_contig752 335303..335507 +
1690964228.2722676-CDS-F-serratus_M_contig752:335302..3355071690964228.2722676-CDS-F-serratus_M_contig752:335302..335507Fucus serratus maleCDSF-serratus_M_contig752 335303..335507 +
1622932271.1431646-CDS-F-serratus_M_contig752:335801..3359081622932271.1431646-CDS-F-serratus_M_contig752:335801..335908Fucus serratus maleCDSF-serratus_M_contig752 335802..335908 +
1690964228.2832308-CDS-F-serratus_M_contig752:335801..3359081690964228.2832308-CDS-F-serratus_M_contig752:335801..335908Fucus serratus maleCDSF-serratus_M_contig752 335802..335908 +
1622932271.1558843-CDS-F-serratus_M_contig752:336085..3361891622932271.1558843-CDS-F-serratus_M_contig752:336085..336189Fucus serratus maleCDSF-serratus_M_contig752 336086..336189 +
1690964228.2929995-CDS-F-serratus_M_contig752:336085..3361891690964228.2929995-CDS-F-serratus_M_contig752:336085..336189Fucus serratus maleCDSF-serratus_M_contig752 336086..336189 +
1622932271.1994424-CDS-F-serratus_M_contig752:336200..3362911622932271.1994424-CDS-F-serratus_M_contig752:336200..336291Fucus serratus maleCDSF-serratus_M_contig752 336201..336291 +
1690964228.3027666-CDS-F-serratus_M_contig752:336200..3362911690964228.3027666-CDS-F-serratus_M_contig752:336200..336291Fucus serratus maleCDSF-serratus_M_contig752 336201..336291 +
1622932271.2220733-CDS-F-serratus_M_contig752:336476..3367051622932271.2220733-CDS-F-serratus_M_contig752:336476..336705Fucus serratus maleCDSF-serratus_M_contig752 336477..336705 +
1690964228.312702-CDS-F-serratus_M_contig752:336476..3367051690964228.312702-CDS-F-serratus_M_contig752:336476..336705Fucus serratus maleCDSF-serratus_M_contig752 336477..336705 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig752.18790.1prot_F-serratus_M_contig752.18790.1Fucus serratus malepolypeptideF-serratus_M_contig752 326554..336705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig752.18790.1

>prot_F-serratus_M_contig752.18790.1 ID=prot_F-serratus_M_contig752.18790.1|Name=mRNA_F-serratus_M_contig752.18790.1|organism=Fucus serratus male|type=polypeptide|length=538bp
MSALCLFLGIAKSAVIDGSGRNGDVCPVLRSSVLRPAGITSTGSKIPETF
ERVMRDSAGRIRLPSAPLSMSTILGVPTLDGGVAVDGKTSQRSRRGKYPV
VELWRRPEMSPKDSLGDSDAGRHMEGCDDIFLGDRSRSPEGETALEYLRK
ALGLGSAQTDAIQEAFPALAQIDPDRFDVRAKLRFVQHTMGADPATVAVS
FPQFFGHPLERHIAPRHAFLVASGRPSGAKLLENGCRGARRMIELSANRF
VAEMVPGREMSDYRRFETSFLRGPFDAARKGDAMTLRLLRSHGWDCWETD
RRGRTALFWAAGAGSVEACSALIEGDRGLRAHTAAGDGSTPLHWAAAGVE
TRRFGTGGHVNICRWLVRQRADPCATTSEGNTVLMWAAWAGGFDVTSVPY
GGVVNRKRSVQIAPTQAYSNEFTRSLDTPTKEETRADLEAVNGNGCSAAH
WAASGGDDAVCRYLHSMGADFARVNRGGNNPLNHAVAYGRRHVAAWLLGE
GSATGAVAPLRRSDDPVLLDLARLTGDEVMQAFLQGR*
back to top

mRNA from alignment at F-serratus_M_contig752:326504..336938+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig752.18790.1 ID=mRNA_F-serratus_M_contig752.18790.1|Name=mRNA_F-serratus_M_contig752.18790.1|organism=Fucus serratus male|type=mRNA|length=10435bp|location=Sequence derived from alignment at F-serratus_M_contig752:326504..336938+ (Fucus serratus male)
TCCTCGTTAGGCATCGCGGGTCGGGGAAAGGATAAAGCCTAGCTTTCGTG
ATGAGTGCTTTATGTCTCTTTCTTGGCATAGCGAAGTCTGCCGTAATAGA
CGGGAGCGGTAGAAATGGCGACGTGTGCCCGGTCCTGCGTTCTTCGGTTC
TTCGTCCAGCAGGCATCACGAGCACAGGCAGCAAGATTCCGGAAACCTTC
GAGCGCGTCATGCGGGACTCGGCAGGACGAATCCGTCTTCCCTCAGCCCC
CCTTTCAATGTCTACGATATTGGGCGTCCCGACTTTGGATGGGGGTGTGG
CTGTTGACGGCAAAACTTCGCAGCGGTCTCGTCGAGGAAAGTATCCTGTC
GTGGAGCTCTGGCGTCGCCCCGAAATGTCACCTAAGGACTCGCTGGGCGA
TTCAGACGCTGGGCGTCACATGGAAGGTTGCGATGATATTTTTCTCGGAG
ATCGCTCCAGAAGTCCAGAAGGCGAGACGGCGCTGGAGTACCTGCGGAAA
GCGCTGGGGCTTGGATCGGCGCAAACTGATGCCATTCAGGAGGCGTTTCC
AGCACTGGCACAGATTGATCCTGACAGATTCGACGTGCGCGCTAAGCTGG
TGAGGGAGGTGGGAATATTTGCCCACATCAGGTGAACTGCCACAAGCTGT
TCTCATTTTTGACACATTTGTTACAGTACCGGGAAGCGTTCGGGCGGAAT
GTTTGATGTTGTGTGGGCGAGCTATTGGTGGTGTGCAGTAGAATTTGCAA
GGTTGGAACATATACCATACTCAAACCCGATATATTTTGACGATTCCGTC
TGAACTAGAATCAAGTAATTGAAACGCCTCCGCGGGTTTCCGGATAATCT
TTGTGCAGTGTTTTCGATTTCAGCATACTGTATATATTTCCAGGAAAAAA
TATACAGAGTATAATATACGTTCCGGGTCGAGCCCTAATCAGCCTCTGCT
CTGTTGTGCCTTTCGGCAGCAGTGATACACGTCACAATACTGTACAACAC
AGCAATTGCGCGGTTGGGGCGGACTATAAATAGGCTGCAAGGCTGTACCC
CGGCCGGGAGTAATCATCGCCTCAAGGTCGCCACCCCATGATTGAATAAC
AATATTCAACAAGATGACTTAAGCTACTGCTTATCCGTGTTAACCCACAA
CGCTCGCTATAGCACGTCGGTGTTGGGAGATGGCTATAGAGATTAACGAT
TATGAGCTGTACTGGTATGTATGGTCACACATGTGTTCTATCAACACCAA
TAGTCAATAGTGGGTGTTGGAAAAGAGAGAGGCACAGTAACAGGCCTATA
GCGACCTGCAAAATGGCAGTACCCGTAACTGAAACTACTTTGAGGACTAC
TGGCGCTGTGCCGGCGGACGCTCGGTAGTAAACGCCATCGGTACGCAATT
GCGCGACCCGATAAACTCGGGAATGACCCAATGGCGTATGGCGGTTTTAA
AATAAATAAGTGGACGGCGCCGCGAAAATCGGGAGTAGTCCCGTCAGTGA
GCACCATATTTAGCCTCAGTATGGAGAATGAGCAGGCTGACACCCGTCTC
TCGAAACCAAATTCTCAGGCGCGTACGGGGACAGGGGAATATCCATTTTT
CCTGTTCAGCTGACCACGGAGCAGGGTTGGCAACCTTACCCGGTTGATCC
TGCTCTTCCTATATGTGATGACAATACATACATACATACGATTAGAACAG
TCCTCATCGCCGCACGGTTCACCAAGGGGGTGACCAGGGTTTTCTGTTTC
CGTTCGTTCTTGTTGCGCTCCAGCGGTTCGTTCAACACACCATGGGGGCT
GACCCGGCGACCGTCGCTGTCTCCTTCCCACAATTTTTCGGCCACCCGTT
GGAACGACACATCGCCCCTAGACACGCGTTCCTCGTGGCGAGCGGACGGC
CTTCAGGTAAGTCGTTTGGAGTTTATTAAGTTGTTGCGCCTTATAAATAT
ATAGATATAATAGATATAACTAATATTACGATTTAAGCTTAGGCCTCGGA
AAACGCAGCGGGTCAACTCAACCCCACCGAGATCAAGACGTTTCCTCGAA
AGTTTTCCAAAGGAGGCATGTTTCTTCGGCGTCTCTGCCCAATCAGGGGC
CCGTTTATTGCTTTGCAACGGTGCCGCCGACGGGTCGACTCAAACCACAC
CGAGATCAAGATGTCTCCTTCAACGCGTTTCAATCGGAGGCGTGGTTTCT
TCAGCGCCTACCCAATCAGAGCCCTGTTTATTATTTGCGACTGTACCGGC
AGTGGCATGAAGAGGTTTTGTATTTGCAACCTGTGATCCGATCTAAACGT
TTTGACATTTTTTCCCCCTGACTGGGGGATGCTCAGAAGGTATAGGCGCG
TTCTGACTTTTCTTTTAAACTACGGTGGGCTTTTGTATTTGCCGCCTTTG
ATCCGACCCAAACGTTTTGACATTCTGACTGGGGGATGCCCAGAAGGTTT
AGGCAGGTTATGTTTTTTTTCTCCAAACTGCGATGGGCTTCTCCCCGACA
TTGTTGACCTCAACCCCTCTCAGATTTATGTTTTCTTCAGCGTCTATCCA
ATCAGAGGCCTGTTTTTTTTTCCCAACAGTGCCGGAGAGGAATAAACAGT
TCACCGCGACATTGTACTGACTGTTGACCCAATGTTACTACCATCGGGGA
ACCCGTTCAAATGCCATGAAAGAGGTTTTGTATTTGCGGCCTTTGATCCC
ACCTAAACGTTTTGACATTTCCCCACCCTGACAGGGGGATGCTCAGAAGG
TCTAGGCGTGTTCTGATTTTCCTTTAAACATTAAAAATGTTCCACACACA
GCCCAGCAGGCAGCTCGGCAGGAGTTTGGGTCTGTGCGTGGCCTGAAACA
TGTTTCCCCTGTTTGGGGGATGCTCAGAAGGGCTAGGCGCGTTTTGATTT
TTCTTTAAACCTTCATAAAATACGTTCCACACACAGCCCATCAGCGATAT
TACAATGAGGCAGCTCGGCAGAAGTTTGGGTCTGTGCGTAGCCTGAAGCG
CACGGAGCCCTGACTGGGGGATGCTCAGAAGGTCTAGGCGCGTTCTGATT
TTCCTTTATAACTTAAAAATAATTGTTCCACACACAACCCAGCAGCAAAT
GCCATGAAAGATGTTTTGTATTATTTGCAGCCTTTGATCCCACCTAAACG
TTTTGACATTTCCCCCCCCTGACTGGGGGATGCTCAGAAGGTCTAGGCGC
GTTCTGATTTTTGTTGAAACATTAAAAATGTTCCACACACAACCCAGCAG
CGATATTACAATTAGGCAGCTCGCCAGGAGTTTGGGTCTGTGCGTAACAC
CTTACCCGCTTGAACCATACTCATGCTATTATTTGTGTGACCATACAACA
TACCAGTATAATTTTTAAGAAGGTGGTAATAATATACTGTACTATGTAAA
ACAAGTCCGGAACAACAGTTCCGGCGATGGGACAAATATCGTACTGCTGT
TGCAGACTAAGTAAATCGTTAGTACACCGCATGCATGGCGATTAATGCAA
GTGTACAGCATAACGGTACTAGGTTTCTCCCCGATACGGACTGAACTCAA
CAATAACGATATGTTCGGAAGGCATTGCCCACCATACTTCTGAGCCTCAT
GGGTTTCAGAATAATCTGGTGTATGAGCATTGCGGCATATCGAAGTCCAC
TGTTAATAGATTTCGGTCGTGTTTTCCTCTTCGAGTGGCGAGTGAATTTT
CCAACAGTTGCTACATGATAGCTGGGGGGCAAGGTTAGCTGCCAGCGTGT
GTTCATTTTTCCGTCGATGCTCCGGGATATTTGTAGTGAGGGTTTACCGT
TCAACACCATTTTTTCTCCTATGTATAGGGATTTTTGCCCTTCTGCCCGG
GAAAACTTTAGGAAGGGTTTACTGTTCAACATGATTCTTTATGTAAAGGA
AATGAGCAGCTTGCGTCCCTAGGTAATTTTTGGGGTATCCCGCTTTCTTT
ATACCATGCCTCTGCCGTTTTACCCGGGGAGCTTGCGTTTGTGCGTACAA
CATGCATTGTGTATGTACAGCTTGGACTCCTACGTTTTGCGATACATTTG
ATACATTTTTATACCAATTTTCTGTCGTTGTAGGCAGAAAACTGCTGTTT
CTTAAGTCGCCAGTTTTCAGTGTCGTCCTGCGTTCCATGAATACTGCCCA
ACATTTCTCACGGCGTTCAGCTACGGTTTTGAGTTGTTCCTTGCTTCAAT
GTGATTTTTAGATTGACCCTTTCCAACAACAGAGGACGGGTTCGAATTTT
AAACTTTGTTCCAACAACTTTTTTCGTAATAAACCATACCACGCAGCAGG
TACAGGAAGGGTAGAACCGCGCGATTTTATTGTGTTGATTGGTGATCCTT
GATTCTTCTTCTTTGCTTTATTTTGATTGACCTCGCGTGTCGAGTGGGAG
CGATGGCCTCTTTATCTCCGTTGTCCAACATGTCGCCTGCGACGTCTCAC
TTTTTAGGGCCTAATATATATATTATACATTTTCTTCCGTTTATTTCTCA
TTGATTTTTCATAAGATTTGTTCCCTTTTTCGCGTCAGTTGGACCAGTAC
GGATCTCAGAAGGTACAGAGCAGAGAACGGAGCGTTTTTTAATGTGAAGA
AATCAAAGCCTACACGCCTTCAGATGATTCTTTAAACAACAATACGCTGG
GCGTGCGCCTTCTTTCACTCCCCTTCACGTCGTTGCCACTCGCTACCATA
CTGAATATACTATACTGTGCATACTACGGTATGCAGTTCGTGCGTACCGC
TCAATCAATCCAAACACAAACACCTCCTCGCACTCTCGACCGAGGACGCC
GAGACTCGCCTCGTGGCCAGTTCGGATGCAGTTCGTGCGTACCGCTCGAT
CGAAACACAAAACACCTCCTCGCACTCTAGGACGTGAGGCCTCACGTCGT
AGCCACTTCGTATGCAGCTCGTGCGTACCGCTCAAATCGAAACACAAAAT
AAGCCTCCTCGCACTCTCAACGGAGGACGGAGGGCCTTACGTCGTGGCCA
CTTGGTATGTAGTATTAATAGTATGCAGTTCGTGCGTACCGCTCAATTCA
AACGCAAACACCTCCTCGCACTCTCCACGGAGGACAGGGGACCCCCAGGC
CTCCGCGTCCGGAGCAGGTCTATAGGTGCATTCTGATTTTGCTTTAAACA
CTACTGCCAATGTTCCCACCTAAACCTTTTGACTGTTCAGGAGGTTTAGC
TGGATGAATTGTCTTTAAACATTAAGGATGCTCAGAAAGAGGTCTAGGCG
CGTTTCCACGAACGCAGCAGCGATATTTTCACCCGTTCAAATGCCATGAA
AGAGGTTTTGGATATGCAGCCTTTGATCCCGCCTAAACGTTTTGACATTT
TTCCCCCCTGGCTGGGGGATGCTCAGAATAATAAGCTCTAGGCGCGTTCT
GATTTTTCTTACAAACAACATTAAAAATGTTCCACACACAACCCAGCAGC
GGTATTACAATGAGGCAGCTCGGCAGGAGTTTGGGTCTGTGCGTAACACC
TTACCGGTTTGTTCGTGGGTACCGCTCGATCCAAACACTCTAGAAGCCTG
TTTATTATTTCGCAATGTTAGTGCCGGCGATGGAATGAAGAGTATTTGCA
GCCTTTGATTCGACCCTAAACGTTTTGGCACTTTTCCCACTGACTGGGGG
ATGCTCAGAAGGCCTACGTACGTTTTGTTTTTGCCTTAAACTACGATGGG
CTTCTCTCTTTTGTATTTGCAGCATTTGACCCCACCTACTAAACGTTTTG
ACATTTCCCCTCCCTGACTGGAGGATGCTCATAAGGTCTAGGCGCGTTCT
AATTTTTCTTTCAACAGTAAATATGATGCACTGGATGAATTTTCTTTAAA
CATTAACGATGCTCACAAAGAGGTCTAGGTGCGTTTCCACGAACGAACGC
AGCAGCGATATTTTCACCCGTTCGTACCGCTCGATCGCAACACAAAACAC
CTCTTCGCACTCTAGGACGGGAGGCCTCACTTCGTATAGCCACTTCGTAT
GCAGCTCGTGCGTACCGCTCAACTGAAACACAAAATAAACCTCCTCTCAC
TCTCAACGGAGGCCGGAGGACCTGACGTCGGCCACTTGGTATGTACTATT
ATTAGTATGCAGTTCGTGCGTACCGCTCAATTCAAACACAGACACCTCGC
ACTCTCCACGGAGGACGGGGGGCTCCCAGGCGCCCGCGTCCGGAGCCCTT
GTATATATATATCCCATCCTTGGGAATAACGTTTTTGTGGTGCGCGACGG
ATCTGAAGGCACTGACTGACACAGGAGCCTTCCCAGCATTTCGGAGAAAG
CGACAAGTCATGCTTGTTAGATCCGCCTCCCCCCGCGCCCATGGTTTCGC
TGAGGTGGCGGTAAGCTCTACAAACATTCGATACAAAATGACTTGGGAAT
GCATGGTCTGAGCCACAGGCCACAGATGGACCACGAGTTCCAGGGGATAG
AGCTATTCGTCCACGCTGAAGGTCGATGGGCTTCCCCTCGCCCAGCGATG
ATTTCTAGTTTTTACTCTCGGAAGTTAAGTTATACTTCGGAGTATATCTT
CTCTGCGAGCCCCGACGGACCTAAAACTATCTCGCCACAAAGTGGTCCTC
GCGCTCCATTACTTCTTCGTGCGCTTCTTATACTAATAATACTACTGTGT
GGAGCCTTCGTGTTGCGCATCTACTATTATAATGAAACGGCTCCAATAAA
TTTTTGCACACCTACCGTCAGGAGCTAAGCTTTTGGAGAATGGATGTCGA
GGCGCGAGGCGGATGATTGAATTATCAGCGAACAGGTACGCGAGCGACAT
GCATGTATCGTCGGAAGACCTCTGCGAATTTTTGATGGTCGGAGGCGCTT
CATCTGTTCCTGAGATGGTGCCTAACAATCTAATATCGAGGACGGTTGAA
GTTACCGTGTGGAAACGGTCTTGTCGTACAATATGCATAGCGGGTTTGCT
CCTGTTTCCTTTCTGTGAAGGTTCGTGGCGGAGATGGTGCCTGGAAGAGA
GATGTCCGACTACCGTCGCTTCGAGACGAGCTTTTTACGAGGACCTTTTG
ACGCTGCGAGGAAGGGAGATGCCATGACGCTGCGACTCTTGAGGTCACAC
GGGTACGGTTCGAGGAAGAAGAGACACAACCTTTTTTGTTTTGAAAGAAC
GAGGCGTGGTAGACGCGGGATCATTTGATGCCGGCTTTCCGTCTGCCATG
CGCTTGTTATTAATACCACCAAGTATTTGATTTCAACGTGCTTGCTACCA
TACTATGGTGCCTACTGTTATTACTAATTAATACCGCTCTTAACCCAAGA
ATACATTATCTCGTGCCCTCTCCCTCCGAAACCTGGTTTCGGGGTATGAG
TATGGAAGGGTCTTTCCGGCGGGTGTAGGGTCGGGCCCACCCATGCTCGA
GAGATGCAGCCAACTAGTCTTTGAGGTTGAGCCGGCCGGTTGAGACACGG
CGGCGGTATGGTTGGTTAAGAACGGTGCTCCCAGGGTGCGCGCCTCTTCC
GAGCTCCAATTTGGTCCCCTTTCGGGAGGTGGCGGCACGCGAAAGGCAGG
GAGCAATGTCGCGGAGAACCTGGTTACGCTCTATCGGGTGAGTGCGCACC
AGATTCGGCGAGGGCGGAGGGCAGCTCGAACGTCGACGAGCCAGGGGAGT
GCTGAACCCCTATGGGCGAGAATCAAAGGTGCGAACCGGGAGGTTTCTGA
GGGAAAACCTGACCTCTGACCAGGGCTTGTTTTCTTCCTACGAGGGCCAA
CAAGGAGCGGGGAATGGGCAAGATTTGTGGGGCTTTTTCAGGGATGCACA
GGGCTTTGGACGGCTGGATGCTGGCTCGCGCGCCGACTTCACCAGCTCAA
GGCCTCCACCACCATGGACCTCGGTATTTCATTTTTTCTGTGTAATGTGT
GGCCTTGAGAAACTTGGGCTTGTTGATCAAAACTGATTGAAGCGTGATTT
GTCCGCTTTGTTGCTGAGAACGCTGACCGTGGGTAGGCGACAATGATCCG
AGTCGATCGGGGTTACTCTCGATATGGAGCAAGAAGGTTTGACGAACCGT
TTTGACATTGATCGAGGCCATTGATTGTAAAGTGTTGCATAACATGTCTT
TGTGTAACCTTCCGAGAGCTAGAAAACTTCTTGTGTCATGTCACTTTTGA
TGACTTTGTTGGATGGACTTGCACATCAGACTGTCTTTTCTGTACCAGGT
AGCGTGTAATTCATTTTCTGAAATACTCGTGGCACTCTTAACAACAGTAG
AAACTGGTTGGTGCCCAAAGACATCGTCGTTACGCCGATAATTTTTCGAT
GTTCTCGGTTTTGGTTGGACCTGGCAAGGATTTTGTCGCCATTTGGATCC
ATGTTGGCCTGGGTAGCAGGTTGTCACCACGATGTGGCCCGTTGACCTCC
GTACCCTAGGTGACCACGAGCAGGATTGGCATTTGATAGGTCTATGGCTG
ACTTGTTGTGTCACCGTAGTTTCTTCAGTTGCAAGGACAATACGCTGAAT
GTGTGAATCAACAACAAGAAGGTCAGACACGATCAGAATTTTCTTGAAAC
AACTAATAATCGCTGTAATCATGAGCAGGATAAAAAAAAGTACCTTCACC
AGGCTTGGTTGGGGTTGAGTAGGATGCACGCATACGGTCGCGCTCGCTCA
GCAAGCGGAGGCACCCGGGGGCCGTCTCCACAATCTCAAGTCTCTACAAC
TCGCTTGCCAATGATGGACATACGCCTAGATCATACGGCCGTCATAAGAA
ACACGAACGTAACCTCGTCAGCGGCTCGTATTGTTCGTCGTTTTTTTAGA
TGGGACTGCTGGGAAACCGATAGACGCGGTCGCACAGCCCTGTTCTGGGC
CGCTGGAGCGGGCTCTGTAGAGGCCTGCTCGGCGTTGATCGAGGGGGACA
GAGGCTTACGGGCGCACACGGCGGCGGGTGACGGATCAACGCCGCTGCAC
TGGGCTGCTGCTGGTGTAGAGACCAGACGATTCGGGACTGGGGGGCACGT
GAATGTGAGTTTGCTCCCGCGTGCTCGTGGTTGCTGCAGAATGAGAGTAG
TGCGTCTCCGCGGAAGGGTTGGCTCAGTGTACTGTTAGCGTTATTTTTGT
TGTTGTTTTTCTCGTTAGGTAAGGGGAAGATTGTAAGGAGAGAACCAACC
GAACGGAACGGGGGAGCAGCTGTTCGCGCGATCATCGACACTTGTCCGCT
TCCTCGCCTGACTCCAGCGATAATCGGTATTATATACCTTAGTCTATACG
TCGAAGGAGAATCTTCTGTTCGTGATAATTTAATGCGTCGGCCTCAAGAT
CTGTCGCTGGCTTGTGAGACAACGCGCTGATCCATGCGCTACAACTTCAG
AGGGAAATACTGTGCTCATGTGGGCGGCGTGGGCCGGGGGATTCGACGTC
ACGAGGTAAGAGTAGGGTTTTCCATGTTCAAGCTTGTAGGGCGTTCCCTT
CTAGACCCTGGTATATGTCTGTGTGTAGGCGGGGCTTGAACCGGCGTGTA
AACGATGCGCTCGTTTTATGACCACACGCGGTTCGATATGTTAAGTATTA
AATAACTATATTCTAAACTTGTGTGTGCAGAGTGTACCCTACGGCGGGGT
GGTCAATCGTAAGAGGTCCGTCCAAATAGCCCCGACTCAGGCGTACAGTA
ATGAATTTACTCGCTCTCTCGACACACCGACCAAAGGTGGGCTGTAGAGG
AAACCCGCGCAGACCTGGAAGCGGTCAACGGGAATGGCTGTTCCGCGGCT
CACTGGGCAGCGTCCGGCGGCGACGACGCTGTCTGCAGGTAAGGACCCAA
CAACTTTAAGGAAGCGGTGGAGTGTGGAAAAAATACGACTCTGTTCACGT
ACCACTTTTACTCTCCAACCGGCAAATGGAAGCTTAGACCATCGTGTCTA
CATGACCCGTGACCACAGCAGGACATCCCACATCTGCAATGCTCTGTGCG
TCGCACGCTTTTGCCCACGATAGGTACCTACATTCCATGGGGGCGGACTT
CGCGCGAGTAAACAGGGGCGGCAACAATCCCCTCAACCACGCCGTTGCCT
ACGGCCGGCGGCACGTCGCCGCGTGGCTCTTGGGGGAAGGTTCCGCGACC
GGGGCGGTGGCACCGTTACGGCGAAGCGATGACCCGGTCTTGCTCGATCT
GGCTCGCCTGACCGGTGATGAAGTGATGCAAGCGTTTCTGCAGGGGCGGT
AACGAAGAAATCTCGCTCGTGCCGCGCGACCTACGCTGCTCACGCTTAAC
AGTGCCTGTCTTCGCCTGGGAGATATCTTCACGTATGCTATACTACAGTC
AAGAGTATTTTGTGTATTACTATAATAGTGTACGAGTATCGATCGGAGTG
AAATGAGAGGGCTACAAATAATGTTGTGAGCCCAAAAAAGCGAAAAAATA
AAAACGTTAAAAGAGGTGAAATCTGAATTCCAGTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig752:326504..336938+

>mRNA_F-serratus_M_contig752.18790.1 ID=mRNA_F-serratus_M_contig752.18790.1|Name=mRNA_F-serratus_M_contig752.18790.1|organism=Fucus serratus male|type=CDS|length=3228bp|location=Sequence derived from alignment at F-serratus_M_contig752:326504..336938+ (Fucus serratus male)
ATGAGTGCTTTATGTCTCTTTCTTGGCATAGCGAAGTCTGCCGTAATAGA
CGGGAGCGGTAGAAATGGCGACGTGTGCCCGGTCCTGCGTTCTTCGGTTC
TTCGTCCAGCAGGCATCACGAGCACAGGCAGCAAGATTCCGGAAACCTTC
GAGCGCGTCATGCGGGACTCGGCAGGACGAATCCGTCTTCCCTCAGCCCC
CCTTTCAATGTCTACGATATTGGGCGTCCCGACTTTGGATGGGGGTGTGG
CTGTTGACGGCAAAACTTCGCAGCGGTCTCGTCGAGGAAAGTATCCTGTC
GTGGAGCTCTGGCGTCGCCCCGAAATGTCACCTAAGGACTCGCTGGGCGA
TTCAGACGCTGGGCGTCACATGGAAGGTTGCGATGATATTTTTCTCGGAG
ATCGCTCCAGAAGTCCAGAAGGCGAGACGGCGCTGGAGTACCTGCGGAAA
GCGCTGGGGCTTGGATCGGCGCAAACTGATGCCATTCAGGAGGCGTTTCC
AGCACTGGCACAGATTGATCCTGACAGATTCGACGTGCGCGCTAAGCTGA
TGAGTGCTTTATGTCTCTTTCTTGGCATAGCGAAGTCTGCCGTAATAGAC
GGGAGCGGTAGAAATGGCGACGTGTGCCCGGTCCTGCGTTCTTCGGTTCT
TCGTCCAGCAGGCATCACGAGCACAGGCAGCAAGATTCCGGAAACCTTCG
AGCGCGTCATGCGGGACTCGGCAGGACGAATCCGTCTTCCCTCAGCCCCC
CTTTCAATGTCTACGATATTGGGCGTCCCGACTTTGGATGGGGGTGTGGC
TGTTGACGGCAAAACTTCGCAGCGGTCTCGTCGAGGAAAGTATCCTGTCG
TGGAGCTCTGGCGTCGCCCCGAAATGTCACCTAAGGACTCGCTGGGCGAT
TCAGACGCTGGGCGTCACATGGAAGGTTGCGATGATATTTTTCTCGGAGA
TCGCTCCAGAAGTCCAGAAGGCGAGACGGCGCTGGAGTACCTGCGGAAAG
CGCTGGGGCTTGGATCGGCGCAAACTGATGCCATTCAGGAGGCGTTTCCA
GCACTGGCACAGATTGATCCTGACAGATTCGACGTGCGCGCTAAGCTGCG
GTTCGTTCAACACACCATGGGGGCTGACCCGGCGACCGTCGCTGTCTCCT
TCCCACAATTTTTCGGCCACCCGTTGGAACGACACATCGCCCCTAGACAC
GCGTTCCTCGTGGCGAGCGGACGGCCTTCAGCGGTTCGTTCAACACACCA
TGGGGGCTGACCCGGCGACCGTCGCTGTCTCCTTCCCACAATTTTTCGGC
CACCCGTTGGAACGACACATCGCCCCTAGACACGCGTTCCTCGTGGCGAG
CGGACGGCCTTCAGGAGCTAAGCTTTTGGAGAATGGATGTCGAGGCGCGA
GGCGGATGATTGAATTATCAGCGAACAGGAGCTAAGCTTTTGGAGAATGG
ATGTCGAGGCGCGAGGCGGATGATTGAATTATCAGCGAACAGGTTCGTGG
CGGAGATGGTGCCTGGAAGAGAGATGTCCGACTACCGTCGCTTCGAGACG
AGCTTTTTACGAGGACCTTTTGACGCTGCGAGGAAGGGAGATGCCATGAC
GCTGCGACTCTTGAGGTCACACGGGTTCGTGGCGGAGATGGTGCCTGGAA
GAGAGATGTCCGACTACCGTCGCTTCGAGACGAGCTTTTTACGAGGACCT
TTTGACGCTGCGAGGAAGGGAGATGCCATGACGCTGCGACTCTTGAGGTC
ACACGGATGGGACTGCTGGGAAACCGATAGACGCGGTCGCACAGCCCTGT
TCTGGGCCGCTGGAGCGGGCTCTGTAGAGGCCTGCTCGGCGTTGATCGAG
GGGGACAGAGGCTTACGGGCGCACACGGCGGCGGGTGACGGATCAACGCC
GCTGCACTGGGCTGCTGCTGGTGTAGAGACCAGACGATTCGGGACTGGGG
GGCACGTGAATATGGGACTGCTGGGAAACCGATAGACGCGGTCGCACAGC
CCTGTTCTGGGCCGCTGGAGCGGGCTCTGTAGAGGCCTGCTCGGCGTTGA
TCGAGGGGGACAGAGGCTTACGGGCGCACACGGCGGCGGGTGACGGATCA
ACGCCGCTGCACTGGGCTGCTGCTGGTGTAGAGACCAGACGATTCGGGAC
TGGGGGGCACGTGAATATCTGTCGCTGGCTTGTGAGACAACGCGCTGATC
CATGCGCTACAACTTCAGAGGGAAATACTGTGCTCATGTGGGCGGCGTGG
GCCGGGGGATTCGACGTCACGAGATCTGTCGCTGGCTTGTGAGACAACGC
GCTGATCCATGCGCTACAACTTCAGAGGGAAATACTGTGCTCATGTGGGC
GGCGTGGGCCGGGGGATTCGACGTCACGAGTGTACCCTACGGCGGGGTGG
TCAATCGTAAGAGGTCCGTCCAAATAGCCCCGACTCAGGCGTACAGTAAT
GAATTTACTCGCTCTCTCGACACACCGACCAAAGTGTACCCTACGGCGGG
GTGGTCAATCGTAAGAGGTCCGTCCAAATAGCCCCGACTCAGGCGTACAG
TAATGAATTTACTCGCTCTCTCGACACACCGACCAAAGAGGAAACCCGCG
CAGACCTGGAAGCGGTCAACGGGAATGGCTGTTCCGCGGCTCACTGGGCA
GCGTCCGGCGGCGACGACGCTGTCTGCAGAGGAAACCCGCGCAGACCTGG
AAGCGGTCAACGGGAATGGCTGTTCCGCGGCTCACTGGGCAGCGTCCGGC
GGCGACGACGCTGTCTGCAGGTACCTACATTCCATGGGGGCGGACTTCGC
GCGAGTAAACAGGGGCGGCAACAATCCCCTCAACCACGCCGTTGCCTACG
GCCGGCGGCACGTCGCCGCGTGGCTCTTGGGGGAAGGTTCCGCGACCGGG
GCGGTGGCACCGTTACGGCGAAGCGATGACCCGGTCTTGCTCGATCTGGC
TCGCCTGACCGGTGATGAAGTGATGCAAGCGTTTCTGCAGGGGCGGTAAG
TACCTACATTCCATGGGGGCGGACTTCGCGCGAGTAAACAGGGGCGGCAA
CAATCCCCTCAACCACGCCGTTGCCTACGGCCGGCGGCACGTCGCCGCGT
GGCTCTTGGGGGAAGGTTCCGCGACCGGGGCGGTGGCACCGTTACGGCGA
AGCGATGACCCGGTCTTGCTCGATCTGGCTCGCCTGACCGGTGATGAAGT
GATGCAAGCGTTTCTGCAGGGGCGGTAA
back to top