mRNA_F-serratus_M_contig751.18786.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig751.18786.1
Unique NamemRNA_F-serratus_M_contig751.18786.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 7.590e-159
Identity = 239/369 (64.77%), Postives = 293/369 (79.40%), Query Frame = 2
Query:  350 FTGKQLEVLAG-VLSEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGET--ERGAVFGDYFVLEAMVRYRQL 1447
            F+G QL VL   VL+++G FTDYT+TDGLW T  D+GD+IDQTVWTSGMVAGM+WYQ+E TG++T    AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    + Y  RVLTGAE+L+ FRW  NIPA+WSWENPS RP+W+RAVNVDM+MN+EI+LWA +NGG     E VA HAD+TWKDIVR+DNST HVA YD DTG+L++ GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL+RS+  L+Y++DNLP D +PPADFDAP SATDNGKDSSA AIV+S L E++ ET +  YL  ++ YLSA+     Y PDATDGYQSILRRA  +WG+   E GAVFGDYF LE MVRY++L
Sbjct:   78 FSGAQLTVLTEEVLTKEGVFTDYTETDGLWRTEKDNGDSIDQTVWTSGMVAGMFWYQYEATGDETMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----EEYLQRVLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKL 441          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 465 bits (1197), Expect = 1.110e-150
Identity = 240/412 (58.25%), Postives = 299/412 (72.57%), Query Frame = 2
Query:  347 DFTGKQLEVLAG-VLSEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTA-DYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLTR*RLCTAQTVGTFCTKTSRRKVTDTVPSTGYL*FFDGRARNN 1576
            DF G+QL VL   VL E   FT YTD DG W TV D+GD ID TVWTSGMVAGM+WYQ+E TG + W   AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL  +SS +D      L+GA+SLYD+R+ +NIPAFWSW NP S P+WERAVNVDMIMNMEIMLWA+VN G+  Y++   +HADTTW D+VRDD STFHVADY+  TG+LVD+GTYQG+ D+STW+RGQAWA+YG +M++RYLQ+P+FL+  +  L YF DNLP D VP ADFDAPV + DN KDSSATAIV SALFE++ +TGE  YL   +++LS++L + +Y+   ATDG+Q+ILR + A WG+   G+V  DYF+LE+MVRY+ ++   +   +T            +TDT PS      F G A +N
Sbjct:   10 DFAGQQLTVLKDDVLVENYIFTSYTDEDGQWITVKDNGDVIDLTVWTSGMVAGMFWYQYEATGQNIWRTYAEDMQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGTSSFKDI----TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMVRYQTMSPSIILRNET---------EVSITDTQPSVE----FSGTALDN 403          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 2.650e-138
Identity = 201/303 (66.34%), Postives = 246/303 (81.19%), Query Frame = 2
Query:  350 FTGKQLEVLAG-VLSEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETG 1255
            F+G QL VL G VL+E+G FTDYT+TDGLW T  D+G++IDQTVWTSGMVAGM+WYQ+E TG++     AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    D Y  RVLTGAE+L+DFRW  NIPA+WSWENP+ RP+W+RAVNVDM+MN+EI+LWA +NGG     E V  HAD+TWKDIVR+DNST HVA YD DTG+ ++ GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL+RS+  LKY++DNLP D +PPADFDAP SATDNGKDSSA AIV+S L E++ ETG
Sbjct:   41 FSGAQLTVLTGDVLTEEGVFTDYTETDGLWRTEKDNGNSIDQTVWTSGMVAGMFWYQYEATGDEAMKTAAEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----DDYLQRVLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 3.100e-131
Identity = 201/320 (62.81%), Postives = 252/320 (78.75%), Query Frame = 2
Query:  491 MVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYL-SAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 1447
            MVAGM WYQ+E TG   W   AE   EGLEG+E LDDNDLGFQ LNSFGLGYRL  ++S +D    R L+GA+SLYD+R+ +NIPAFWSW NP++ P+WERAVNVDMIMNMEIMLWA+VNGG+  Y++ V +HADTTW D+VRDD ST+HVADYDP TG+LVD+GTYQG+ D+STW+RGQAWA+YG  M+YRYL+E +FL+ ++  L YF DNLP D VP ADFDAPV + DN KDSSATAIV SALFE++  TGE  YL  A+++L S +L++ Y+   ATDG+Q+ILR + A WG+   G+V  DYF+LE+MVRY+ +
Sbjct:    1 MVAGMCWYQYEATGQSIWQTYAEDMQEGLEGIEVLDDNDLGFQTLNSFGLGYRLVGTTSFKD----RTLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMVRYKTM 315          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 3.140e-130
Identity = 205/320 (64.06%), Postives = 251/320 (78.44%), Query Frame = 2
Query:  491 MVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVL-TADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 1447
            MVAGM+WYQ+E T    W   AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL    S    +K R L GAESLYDFR+ +NIPAFWSW+ PS  P+WERAVNVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+D ST+HVADYDP TGDL D+GTYQG+ D+STW+RGQAWAVYG  M++RYL++ +FL+RS+  L YF DNLP D VP ADFDAP ++ DN KDSSATAIVASALFE++  TGE  YL  A+++LS++L ++ Y+   ATDG+Q++LR + A WGE   G+V GDYF+LEAMVRY+ +
Sbjct:    1 MVAGMFWYQYEATCASKWKTYAEDIQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGKGS----FKERTLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMVRYKTM 315          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 300 bits (768), Expect = 3.130e-89
Identity = 166/355 (46.76%), Postives = 226/355 (63.66%), Query Frame = 2
Query:  386 LSEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRPEWER-AVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRY 1438
            LS+Q TF +YT+T G+W T +D       + WTSG V G++WY  +L+ +  WA +   + +G+       DND GFQ+  +FG    L +     D Y + ++ GA++L D RW +NI AF +W    S P  E   VN+DM+MNMEI+LWAS +GGNT +A+    HAD +W+D+VRDD STFHV DY+ D G +  + T+QG+  +STW+RGQAWAVYG  M+YRY Q P+ LER+     YF    +    D VP +DFDAP+ + +N +D+SA AIVASA  E+Y  TGE KYLT AE  L++ LT   YL   TD Y+S+L + + KWGE E GAV GDY+ +EAM RY
Sbjct:   48 LSDQETFVNYTNTSGVWRTQND-------STWTSGFVPGIFWYLSDLSNDAIWANRGARWDQGVRSRATATDNDTGFQIYCAFGTALMLGADVDTSD-YTSVIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNS-LTQAPYLSIGTD-YESVLAKGSEKWGEPEVGAVTGDYYFIEAMWRY 390          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 270 bits (689), Expect = 1.760e-78
Identity = 155/370 (41.89%), Postives = 217/370 (58.65%), Query Frame = 2
Query:  359 KQLEVLAGVLSE-QGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLP---SDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 1444
            K   +    LS+ +  FT YTD+DG W T  D         W SG V G++WY   LT ++ W ++A+F+ +G+       DND GFQ+ +SFGLGY L  +++    YK  ++ GA ++ + R+  NI  F SW    +NP+  P     VN+D +MNME++LW   N     Y E    HAD TW+  +R + ST+HV  Y  D G +VD+ T+QG+  +STW+RGQAW+VY   M YRY    + LERS+   +YF +       D +P ADFDAP+    N +DSSATAIVASAL E+Y  T E KYL  AE  L+++ T ++   D    YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct:   41 KSTNLAINALSDNKENFTAYTDSDGQWITEPDRN-------WCSGFVPGIFWYLNALTNDEVWQQRAKFWTDGVRSRAYATDNDTGFQIFDSFGLGYTLGGNAT--PDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPF---EVNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLAMDPE--YQSILLKGSEKWGEEEVGTIFGDYFFIEALYRWQQ 394          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 267 bits (682), Expect = 2.130e-77
Identity = 151/359 (42.06%), Postives = 210/359 (58.50%), Query Frame = 2
Query:  389 SEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 1444
            ++  TFT YTD DG WE   D         W SG V G++WY   +T + +W +KAEF+ EG+       DND GFQV +SFGLGY +   +S  D YK  +  GA +L   R+  +I AF SW    +NP++ P     VN+D +MNME++LW   N     Y +    HAD TW+  VRD+ ST+HV  Y+ D G +  + T+QG+  +STW+RGQAW+VY   M YR+    + LERS+    YF        +D VP +DFDAP+    N KD+SATA+VAS L E+Y  T + KYL  AE  L ++   +Y   +    YQ+IL++ + KWGE E G +FGDYF +EA+ R++Q
Sbjct:   57 NDNETFTAYTDVDGEWEQEPDRN-------WCSGFVPGIFWYLNAMTADQSWQKKAEFWTEGVRSRAYATDNDTGFQVFDSFGLGYTIGGVTS--DDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPF---EVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEYLARETE--YQAILKKGSEKWGEPEVGTIFGDYFFIEALYRWKQ 399          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 263 bits (673), Expect = 4.170e-76
Identity = 152/368 (41.30%), Postives = 213/368 (57.88%), Query Frame = 2
Query:  359 KQLEVLAG--VLSEQGTFTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWENPSSRP-EWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPS---DGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 1444
             + E+LA   + S +  FT YT+  G W+             W SG + G++WY   L+ N  W + AE + EG+       DND GFQ+ NSFGLGY +    S  D YK  ++ GA +L   R+  +I AF SW    S P      VN+D +MNME++LW   +     + +    HAD TW+  VR++ ST+HV  Y P +G++V + T+QG+   STW+RGQAW+VY   M YRY    + LERS+   +YF ++      D VP +DFDAP+   DN +DSSATAIVASAL E+Y  T + KYL  A+Q L+++ T  Y   D  + YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct:   46 SKSELLASEALNSNKHWFTAYTNEAGKWQHEYSKN-------WCSGFIPGIFWYLNALSNNGQWQQYAEHWTEGVRSRAYATDNDTGFQIFNSFGLGYTMGKKPS--DDYKQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPFEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLAMD--NNYQSILLKGSEKWGEPEVGTIFGDYFFIEALYRWQQ 400          
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM)

HSP 1 Score: 263 bits (671), Expect = 9.590e-76
Identity = 152/356 (42.70%), Postives = 213/356 (59.83%), Query Frame = 2
Query:  404 FTDYTDTDGLWETVDDDGDAIDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWE----NPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDD---NLPSDGVPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLT 1450
            FTDYTDTDG W+T +          W SG V G++WY   +T +  W  +A  + EG+       DND GFQ+ +SFGLGY +   ++  + YK+ ++TGA++L + R+   I AF SW+    NP S P     VN+D +MNME++LW   N     Y +    HAD TW + VR++ ST+HV  Y+   G +V + T+QG+   STW+RGQAWAVY   M YRY    + LERS    +Y+ +      +D VP ADFDAP+   DN +DSSA AIVASAL E+Y  T E +YL  A+  L+++ T  Y L +  D Y+SIL + + KWGE E G++FGDYF +EA+ R++  T
Sbjct:   69 FTDYTDTDGEWDTKN-------SRTWCSGFVPGIFWYLSVMTEDKEWKNRAVSWTEGVRARSYATDNDTGFQIFDSFGLGYTIGGENT--EDYKSVMVTGAKTLVEERYNNEIGAFRSWKQGVSNPISMPF---EVNIDQLMNMELVLWVGKNADKPEYTQMAISHADKTWANNVRENGSTYHVVSYNSQ-GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRYTGLDRMLERSKKSYQYYLEATKKQTNDLVPYADFDAPLDK-DNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSLATPTY-LANNPD-YESILLKGSEKWGEPEVGSIFGDYFFVEALYRWKVWT 408          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig751.18786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCI0_9PHAE7.590e-15964.77GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FUJ9_ECTSI1.110e-15058.25Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D8LHN8_ECTSI2.650e-13866.34Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JQV0_9PHAE3.100e-13162.81GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FQV4_ECTSI3.140e-13064.06Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6N6ZAI7_9BACT3.130e-8946.76Putative unsaturated glucuronyl hydrolase n=1 Tax=... [more]
UPI00200F56051.760e-7841.89glycoside hydrolase family 88 protein n=1 Tax=Agar... [more]
UPI001F1B9B3F2.130e-7742.06glycoside hydrolase family 88 protein n=1 Tax=Vibr... [more]
R9PSV9_AGAAL4.170e-7641.30Putative unsaturated glucuronyl hydrolase n=4 Tax=... [more]
A0A4Y7ZV10_9GAMM9.590e-7642.70Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig751contigF-serratus_M_contig751:55735..62624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.5
Seed ortholog evalue4.8e-130
Seed eggNOG ortholog2880.D7FUK0
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Glycosyl Hydrolase Family 88
EggNOG OGs2CYCX@1,2S3MN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size2641
Cds size1443
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig751.18786.1prot_F-serratus_M_contig751.18786.1Fucus serratus malepolypeptideF-serratus_M_contig751 55748..61439 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932269.6337347-UTR-F-serratus_M_contig751:55734..557471622932269.6337347-UTR-F-serratus_M_contig751:55734..55747Fucus serratus maleUTRF-serratus_M_contig751 55735..55747 +
1690964227.465563-UTR-F-serratus_M_contig751:55734..557471690964227.465563-UTR-F-serratus_M_contig751:55734..55747Fucus serratus maleUTRF-serratus_M_contig751 55735..55747 +
1622932269.9226017-UTR-F-serratus_M_contig751:61439..626241622932269.9226017-UTR-F-serratus_M_contig751:61439..62624Fucus serratus maleUTRF-serratus_M_contig751 61440..62624 +
1690964227.624942-UTR-F-serratus_M_contig751:61439..626241690964227.624942-UTR-F-serratus_M_contig751:61439..62624Fucus serratus maleUTRF-serratus_M_contig751 61440..62624 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932269.680978-CDS-F-serratus_M_contig751:55747..559401622932269.680978-CDS-F-serratus_M_contig751:55747..55940Fucus serratus maleCDSF-serratus_M_contig751 55748..55940 +
1690964227.475405-CDS-F-serratus_M_contig751:55747..559401690964227.475405-CDS-F-serratus_M_contig751:55747..55940Fucus serratus maleCDSF-serratus_M_contig751 55748..55940 +
1622932269.7003763-CDS-F-serratus_M_contig751:56941..570821622932269.7003763-CDS-F-serratus_M_contig751:56941..57082Fucus serratus maleCDSF-serratus_M_contig751 56942..57082 +
1690964227.483658-CDS-F-serratus_M_contig751:56941..570821690964227.483658-CDS-F-serratus_M_contig751:56941..57082Fucus serratus maleCDSF-serratus_M_contig751 56942..57082 +
1622932269.721995-CDS-F-serratus_M_contig751:57755..578941622932269.721995-CDS-F-serratus_M_contig751:57755..57894Fucus serratus maleCDSF-serratus_M_contig751 57756..57894 +
1690964227.4975033-CDS-F-serratus_M_contig751:57755..578941690964227.4975033-CDS-F-serratus_M_contig751:57755..57894Fucus serratus maleCDSF-serratus_M_contig751 57756..57894 +
1622932269.7381506-CDS-F-serratus_M_contig751:58129..581901622932269.7381506-CDS-F-serratus_M_contig751:58129..58190Fucus serratus maleCDSF-serratus_M_contig751 58130..58190 +
1690964227.5140064-CDS-F-serratus_M_contig751:58129..581901690964227.5140064-CDS-F-serratus_M_contig751:58129..58190Fucus serratus maleCDSF-serratus_M_contig751 58130..58190 +
1622932269.7665095-CDS-F-serratus_M_contig751:58424..584961622932269.7665095-CDS-F-serratus_M_contig751:58424..58496Fucus serratus maleCDSF-serratus_M_contig751 58425..58496 +
1690964227.5274591-CDS-F-serratus_M_contig751:58424..584961690964227.5274591-CDS-F-serratus_M_contig751:58424..58496Fucus serratus maleCDSF-serratus_M_contig751 58425..58496 +
1622932269.7843597-CDS-F-serratus_M_contig751:58877..589911622932269.7843597-CDS-F-serratus_M_contig751:58877..58991Fucus serratus maleCDSF-serratus_M_contig751 58878..58991 +
1690964227.5369213-CDS-F-serratus_M_contig751:58877..589911690964227.5369213-CDS-F-serratus_M_contig751:58877..58991Fucus serratus maleCDSF-serratus_M_contig751 58878..58991 +
1622932269.8061614-CDS-F-serratus_M_contig751:59367..595191622932269.8061614-CDS-F-serratus_M_contig751:59367..59519Fucus serratus maleCDSF-serratus_M_contig751 59368..59519 +
1690964227.546613-CDS-F-serratus_M_contig751:59367..595191690964227.546613-CDS-F-serratus_M_contig751:59367..59519Fucus serratus maleCDSF-serratus_M_contig751 59368..59519 +
1622932269.8264208-CDS-F-serratus_M_contig751:59779..598771622932269.8264208-CDS-F-serratus_M_contig751:59779..59877Fucus serratus maleCDSF-serratus_M_contig751 59780..59877 +
1690964227.5564003-CDS-F-serratus_M_contig751:59779..598771690964227.5564003-CDS-F-serratus_M_contig751:59779..59877Fucus serratus maleCDSF-serratus_M_contig751 59780..59877 +
1622932269.8455818-CDS-F-serratus_M_contig751:60183..603131622932269.8455818-CDS-F-serratus_M_contig751:60183..60313Fucus serratus maleCDSF-serratus_M_contig751 60184..60313 +
1690964227.5688825-CDS-F-serratus_M_contig751:60183..603131690964227.5688825-CDS-F-serratus_M_contig751:60183..60313Fucus serratus maleCDSF-serratus_M_contig751 60184..60313 +
1622932269.868633-CDS-F-serratus_M_contig751:60585..607251622932269.868633-CDS-F-serratus_M_contig751:60585..60725Fucus serratus maleCDSF-serratus_M_contig751 60586..60725 +
1690964227.5796247-CDS-F-serratus_M_contig751:60585..607251690964227.5796247-CDS-F-serratus_M_contig751:60585..60725Fucus serratus maleCDSF-serratus_M_contig751 60586..60725 +
1622932269.8864152-CDS-F-serratus_M_contig751:60990..611661622932269.8864152-CDS-F-serratus_M_contig751:60990..61166Fucus serratus maleCDSF-serratus_M_contig751 60991..61166 +
1690964227.5897717-CDS-F-serratus_M_contig751:60990..611661690964227.5897717-CDS-F-serratus_M_contig751:60990..61166Fucus serratus maleCDSF-serratus_M_contig751 60991..61166 +
1622932269.9036806-CDS-F-serratus_M_contig751:61412..614391622932269.9036806-CDS-F-serratus_M_contig751:61412..61439Fucus serratus maleCDSF-serratus_M_contig751 61413..61439 +
1690964227.6089237-CDS-F-serratus_M_contig751:61412..614391690964227.6089237-CDS-F-serratus_M_contig751:61412..61439Fucus serratus maleCDSF-serratus_M_contig751 61413..61439 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig751.18786.1

>prot_F-serratus_M_contig751.18786.1 ID=prot_F-serratus_M_contig751.18786.1|Name=mRNA_F-serratus_M_contig751.18786.1|organism=Fucus serratus male|type=polypeptide|length=481bp
MRHVSSSSFLVVLTAFAAATGASGRITASEGRVTFKENNYEAVRHMNAGS
EDKFPRRLSEDASTDETPTSSGGCDANPCLNGGSCSSSGDGYQCSCAIGY
GGTDCETDTFTDFTGKQLEVLAGVLSEQGTFTDYTDTDGLWETVDDDGDA
IDQTVWTSGMVAGMYWYQFELTGNDTWAEKAEFFCEGLEGVEELDDNDLG
FQVLNSFGLGYRLSSSSSLRDAYKARVLTGAESLYDFRWTANIPAFWSWE
NPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDI
VRDDNSTFHVADYDPDTGDLVDQGTYQGYADNSTWTRGQAWAVYGNVMIY
RYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATA
IVASALFEIYAETGESKYLTWAEQYLSAVLTADYYLPDATDGYQSILRRA
TAKWGETERGAVFGDYFVLEAMVRYRQLTR*
back to top

mRNA from alignment at F-serratus_M_contig751:55735..62624+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig751.18786.1 ID=mRNA_F-serratus_M_contig751.18786.1|Name=mRNA_F-serratus_M_contig751.18786.1|organism=Fucus serratus male|type=mRNA|length=6890bp|location=Sequence derived from alignment at F-serratus_M_contig751:55735..62624+ (Fucus serratus male)
TCCTGCTACAACCATGAGGCATGTATCATCATCTAGCTTCTTGGTGGTGC TTACCGCATTCGCTGCCGCAACGGGAGCGAGTGGACGAATCACGGCCAGC GAGGGTCGTGTCACGTTCAAGGAGAACAACTACGAGGCCGTCCGCCACAT GAATGCTGGTTCTGAGGATAAGTTCCCTCGGCGCCTTAGCGAGGACGCAA GCACAGGTGGGTTTGCCCAGTGTATTGGTGTTCCAAAAAATTGAAGAAAA CGTTGTCTGTACGCCCGAGACACTTCAAAATTCCATTTCGCGCTTTAGCC TCCCATTTCTCGTATTGCAATACGAAAACATGTGTTGGTTCAACCTCCAC ATAGTTCGTTTGTTCAGAAGGTGTCAGTTCCAACGCAGTCTCTTTTGGGC CCGGGCCGGTATATAAATTGTAACCCTAACGAATGAGAAAAATCGCAGGA TTGAAGGATTTGGACACAAACAAGAAACAATAATGAAGCAAGGTAAGTTA ATTCAAGGGTTAATTGGTTAACGTGGGGAACACACCCAGGGACACACACA CAAGACAGAGGATGGATGTGAGTGGCATAGAGTGACTAGGATGACAGGTC CGGATTGCGCGGTTGCGTGCAGTTTAATAATTACACACGCACACGCACAC CCTGCTTCCCTGCTCATCTCGCGAAACTCGGTGGCGTTTCTATCGTGCAA ACAAAATGGGAAAACACTAATTCGAAATTTAGTCACCCCCTGCGGCAACG GCCTTCCGGGAGTCGAACTGGGGGACGTGTGTTGCCCGGAGGGTTGCAGT ATTTGCGGCGGGGTTGTAGGTAGCTCGCGCCCTGAAGGCCCTTCTGCCTG CTGCACCAGCTACACTAAGTCCCTCGGACCCAAGTGCGGGGACTCAGGGG CCGCCCTTTTTTGCCCCCACTTGTTATTATATGATGCAAGCTTTCTCCGC GTTTCGTATCCGACATTATTTTTAGAGCAGAATGACTGTCGTTTTGAAGT AGGGTTGCTGTTCTCAGGTTTGCGCCGCTGGTCGTTGAGGATCAGTAGCG AGGTGGCGAAAATCTCTGCAGCCCGAAAGTAGGTTATCGAAGCAGTAAAT TTTCGTCGCCGCTTTTCCATTGCTCTTTTGGGTAAAACGGGCGAGCTCGT CCTGAACTTACTCGTGATTCCCGTTTGTCAAACGCATATTGTCGTGTGGA CCCACAGACGAAACTCCTACCTCCTCAGGTGGATGTGACGCGAATCCTTG CCTCAATGGCGGATCTTGCTCAAGTTCTGGTGATGGGTATCAGTGCTCCT GTGCGATTGGCTACGGCGGGACGGATTGTGAAACAGACACATTCACGGGT GCGTTTCACAAGTGTGTGTTGGTGTATTTGTATTTTGTTTCGGCATCTTA CTCCGGCACCACCGCTGTTGGACACGTTTCGTAACCGATCAACAAAGTGG GCGGTTGGCTAGCACAAATATATATATATTGGTCTCTATATTTTTTAGAG GGGGTGATGACACGAAATCGTGGCTCGTTTAAGGGAACTGAGGAGCCATC CCCTCCCCGTGAATCTTAACCTAGTCCTGTCGCAACTGATCGAAAGTCAC CCCTTGATGAGGTGGTCAACTCTACAACCAGTTCATGGCATTCGGTGCAT CTTAACCCTACGGCCTCTCTATCGACAGACCTGTCGGGTTTAATTGTTCA TGGCGGGCTGATGCGAAAATAACTTCGTCGTTTTTAGTGGATTGCGACAG CTGTACTACTTCTCTCCAGAGGTCCCCTCCAGAAGCCATATCTCCATACA TTTTGTGGCGACTTTCCTCTTGATTGACGTAATAGCACGGAGCAATATCC TCACGACCCTGCAGGGCACGGTCCTCTTTTCTTCGCGAAGAATCAGTCGG CGTACCTTATGCGACGGCGCTGCCTCGCTCGTGGATGCTTACCTCTCTTC CTCCTGCTGCCGCTGTACACCCCGCGTGTTATGTTATCTTCGTTGACATG GGCATACTGCGTCAATTCAAGATTTCACGGGAAAGCAACTCGAGGTGCTA GCAGGCGTGCTGAGTGAGCAGGGCACGTTCACTGACTACACTGACACGGA TGGTCTTTGGGAGACGGTAGATGATGACGGAGATGCCATCGACCAGACAG TATGGACCAGGTATATATAGAGTGTATACAGAGTACATGCGGATTCCCGC TGATTCCGCTTTAACCTGCTGCGTGGTGACTAGTCATCTTCATTCCCCTG CACTTCGAAAGCGCCGCTACTGTTGTTCTTCGGAGAGGGTAGACTTTTCT TCCTTCTCGGAGTTGCCTCTGCCCCTGTCATAATCAACGGCATCGTTTGT ACTATTTCTCTTTAACCGTCTCGTTCTGTTTTCCGTCGCCTGCAGCGGAA TGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACGGGAAACGACACA TGGGCGGTAAGGGCAGAAGTCTTGCTCCGTCGCCACCGCTGCCTGTTTTT TCACTTTGACAGTTGTACACAAGGCCGCGCGAGACACGGTCGACATTTGG TCGCCCTCGCGTACCACTTTCCCACGACGCGGTAGAATCCACCATCAGTT TTCTTCGGTCGAGCTTTAGTAACAGCGTGTACGAGAACACGTCGTTGAAC GGATTTGTATGTTCCCCATTTGTGCAAACCAATGTCACAGGAGAAAGCCG AATTCTTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGATGACAACGAT CTTGGTTTTCAGGCGAGAGATGCGGACATGTCCAAGTGTTCGTGTTCTGA GGGGCGCGTTGTCTGCGAACTGCTATTATATAATTCTAGTTTTTTTTTAG CGCGGTGTTCTTACATCCATCACGAGGTCACAACAAAGGGAGAACGGCAA GGTTCACACATTCCCACGTGACGGACGTTTCAGCCCACAAGCGAGGTCAA AGGGGACGACGGGATGGAGAAAACTCATTTGCATTATTTGTGGAAATTGC AGCTGAAATAAATTTTCCTGTCATCGGACCTACGTGGCTAACGAGCAGGA AGCTTCCTCGCAATGCATCTCATGCATTCATGATCTACTTGGTGTGACAC TTGCGTAACGGAGAAGTATTGCATGCACCGCTGGCGTTTGCAGGTACTCA ACTCCTTCGGTCTAGGTTACAGGCTCTCGTCGTCCAGCTCTCTCCGTGAT GCTTACAAAGCGAGGGTGCTGACGGGCGCTGAGTCGCTCTACGACTTTAG ATGGACGGTAAGTACCCCTCTATACCACCTATTACCAAGTGTCATCTGGG TCTGTTAAATACGCAGTAGCCGTACACATTTGACATGGGGCGTAACCGAT GGGCAGCGTACCACCTAGCCCGTTGCCGTCCCCGAGCTCGTCTAGATATT GTTGGCGAAACAATACATGGCAATCCCTTCTCGCCCGACCTAACTACGTG CACTACCTTCGCTAGTCACCTTCAATAAAAGGGGGCTGCTCTCGTTTGCT TAGCCTAGCTGTCGGGCGTTGTCGGAAGAAAAATACATGGCGGTGGAAAA GCGTTCACGCATTTTGAGTCGTGGATGGTCCGGACATTTTCACTGCTGAA GCCTTTCTGCTACGACCCACTGCGGAAAAACAGGCCAACATCCCCGCCTT CTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTGCCGTCA ACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGTGTCAAT GGAGGAAACACGACCTATGCGGAGAACGTCGCTGAGTGAGTATTTATAGG ATAAGCAGAGACTTTGATTTTCCCTATGTAGGTCTCTTCACCCGGTCACG CATCTACTCGTCCTACAGACCTGTCGCTACTCGACCCAGGCTGCCCTCGA GGATGGAAGAACGTTCATGGTCGTGCCCTCCAGCATCTCTTAGTGTCGAA CCTCACTCTCGCGAGCTCGTATATTCTTTTTCAACGCTGACCCTCCTCAA ATTAAAACGCGAAACGTGATCCTGCATCGACAACGACCCTTCCAGTCACG CCGACACCACGTGGAAAGACATCGTCCGTGACGACAACAGCACGTTCCAC GTAGCGGACTATGACCCCGATACCGGAGATCTTGTGGATCAAGGTACGTA GGGGAAATGTTCACTCGCGCGTACTAAGAGAGCGATTTCAACTACATTGA GCCGCAATTTTTACGAGTTTCTTTTTTCCCGTGAGCCTGGTCGGTTTGGC GTGAAACCCGAAAGCAACACTGCTGGCCAACATTGCAAGCGCCGAAACGT TTTATTGCACCCAGAAACATGATAACGAAGCATCGATAAACCCGCATCGA GGTATGACTTCGACGTGATCGACTCGCCAGCATAAGCGGTGCGGACGGAT TTGTGCCTTTTTACTTAGAAAAATGTTGTTTGTGCATTGCTCCCTATAGG GACGTACCAAGGTTACGCTGACAACTCTACCTGGACAAGGGGGCAGGCCT GGGCCGTTTACGGAAACGTGATGATCTACCGCTACCTGCAGGAGCCTAAG TTCCTCGAGCGATCGCTGGCCTGTCTCAAGTAAGATCTGGTGTGGGGTTC AGAAGTACCACAATGTGTTGCAAGCGATTTCCCCTTCACATAGCCCGTGT CTACGCTCCGCTTCCGGGATGAGAAAACTCGCACCGGATACAAGCTTCAC GCTGAACGCGACAAGCCTGGGTACATTTGTCGGCAACACTAATGATCTAC GCCGTCTGCCCCTATTAATACTTCGTACCGAGTCAAGCATTTTGTTGAGA ACTCCCGTGTCGTTTGGCCCGGTGGTGCCCGCCGGCCGGGATTGACTGCA GGTACTTCGACGACAACCTGCCGAGCGATGGAGTCCCTCCCGCGGACTTC GATGCCCCGGTTTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGC CATCGTCGCTTCCGCCCTCTTCGAGATATATGCCGAAACCGGTGCGTCGT TATATTTGGAACTTCGAGTTACGCTGCACCACAAACCGCCAAACGGTGCT TTGTGATGTGTCTGGCCTGACACATAGCGTGGTACCTTGCCTCCTTACTG AACGAAAACATATTACGTAAAATCCTTCAATGTGGTTGAAGTTTACTCGT TTTAGTTTCCTCACAAATGATATCTCGTTTCTCCGGTTAATAACATAAAC TGTTGACGGTTACTCTGCCGTTCACCGCCTTCTCCGACTTATCTACGCGC GGTCAGGGGAGTCGAAGTACCTGACCTGGGCGGAACAATACCTGTCTGCG GTTCTTACCGCCGACTACTACTTGCCTGACGCCACCGATGGATACCAGTC CATCTTGCGCCGAGCGACGGCAAAGTGGGGCGAGACGGAGAGGGGTGCCG TTTTCGGTGACTACTTTGTGCTCGAGGCCATGGTAAGTGGAGCTGAGTTG AGTACTTTTGCCTCGAGGGTTGAAAAAAGAGCCTCACTTGTAGTTTCACA TTTAGTGCAGGAGTCCCCCCGCTTGAGTGATGCGGGGACTTGAGCTCCTC GAGATAGGGAGTAACCTACAACGTAAAACTGCCTCATGAGCATTCATGCT CTTCTGTGCATGCCTTCTCTGAGCCCGTGACCTCTCGACGCTCCATCTAT GCAACACGACTGTGAAAATCTATCGCAGGTGCGATACAGGCAGTTGACGC GTTAAAGACTCTGTACTGCGCAAACAGTGGGTACCTTTTGCACGAAGACC TCTCGTCGAAAAGTTACGGACACGGTGCCGTCAACTGGGTACCTTTAATT CTTCGATGGGAGAGCTCGTAACAACACCGACACAAAACAATCCCCGAAGG GACATGTGTCCAAGGGTTTCGACGAATCTGCGGGGCCGACTTCCTTTTGA AGGAAGATAGGTTCAATTCCGGTAAAATAATAAGGTAGAATGTAAGGCGC GATATTGAAGTATAACAAGTCGCTGTGTGCACGGTTTATAGTGACTTGTT CTTAACTTCTCCGAGTCGACAAATAAGGTACAGGTTGTGTGAGTACTCTT TGGTTTATTGTCGAAAATATATACTTTTCCTAAGCCACACAGAATACAAC ATATAGATATGTCAAATAACCGGAAGCACCTCAATTGCAGGATGGGTTTC TGGGGGATTTTACATAGAAGAGAAAAGGTAGGCGCCCACTCAATCACTCA CGTACCACAGGTACTATGGTCTGGCAAATCGATGTCGTTGTAGAGAAACA ATTCGCAGTCTGGCGATCATTATGGCTTGCGCAGAATCAACAAACCAGGG GAGGGAACGACGGTACGACTGCCTCTTGTGTGCGGTCGCCTTGGGTGTGC GGTGTTGGAATGACGGCGAAGAAAGATGCTGGGGGAGCATCGTAGGTACG GCATATTTCGTTGACGTTATGACGTTGTTCAGGATGTATCTTTAGTCTAT TCAGTACGTTTCGGTATGAATAAGGGATCGTGATAATAGGGACAAGTGGT TGCTTAACATCTGCTGTCTCGTGCCTCTGCCTTTCCGTTTGCGTTGTGAC ATGAGGCGGTCGGTGCCTCCAGTGCCTTATCGGAGTATGGACGTGTTGCA AACTTCAGTCTCTGGTGCATGTTTGAGTCGTACCGGGTTGTTTACCGTCG AAGGATTGAGACCCTTTTGTGTTTGACGTTCGTGCTATGTTTGACTCTTG TACCTCCATCGAGGTCCGTGTATGTTTTATATCCTATTCTTTTGTGTAAG CTGCCTGATGTCGAAAGCGAGGCGAGGATGCCAGCGCCGCCTATCTGACC TCTCCACCCAACGTAACATGTAACAGGCTATTCAAGCTAATGAATCACGC CATGAACAATAAAAAACGAATACGAACTGGAAAAAGCGCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig751:55735..62624+

>mRNA_F-serratus_M_contig751.18786.1 ID=mRNA_F-serratus_M_contig751.18786.1|Name=mRNA_F-serratus_M_contig751.18786.1|organism=Fucus serratus male|type=CDS|length=2886bp|location=Sequence derived from alignment at F-serratus_M_contig751:55735..62624+ (Fucus serratus male)
ATGAGGCATGTATCATCATCTAGCTTCTTGGTGGTGCTTACCGCATTCGC
TGCCGCAACGGGAGCGAGTGGACGAATCACGGCCAGCGAGGGTCGTGTCA
CGTTCAAGGAGAACAACTACGAGGCCGTCCGCCACATGAATGCTGGTTCT
GAGGATAAGTTCCCTCGGCGCCTTAGCGAGGACGCAAGCACAGATGAGGC
ATGTATCATCATCTAGCTTCTTGGTGGTGCTTACCGCATTCGCTGCCGCA
ACGGGAGCGAGTGGACGAATCACGGCCAGCGAGGGTCGTGTCACGTTCAA
GGAGAACAACTACGAGGCCGTCCGCCACATGAATGCTGGTTCTGAGGATA
AGTTCCCTCGGCGCCTTAGCGAGGACGCAAGCACAGACGAAACTCCTACC
TCCTCAGGTGGATGTGACGCGAATCCTTGCCTCAATGGCGGATCTTGCTC
AAGTTCTGGTGATGGGTATCAGTGCTCCTGTGCGATTGGCTACGGCGGGA
CGGATTGTGAAACAGACACATTCACGGACGAAACTCCTACCTCCTCAGGT
GGATGTGACGCGAATCCTTGCCTCAATGGCGGATCTTGCTCAAGTTCTGG
TGATGGGTATCAGTGCTCCTGTGCGATTGGCTACGGCGGGACGGATTGTG
AAACAGACACATTCACGGATTTCACGGGAAAGCAACTCGAGGTGCTAGCA
GGCGTGCTGAGTGAGCAGGGCACGTTCACTGACTACACTGACACGGATGG
TCTTTGGGAGACGGTAGATGATGACGGAGATGCCATCGACCAGACAGTAT
GGACCAGATTTCACGGGAAAGCAACTCGAGGTGCTAGCAGGCGTGCTGAG
TGAGCAGGGCACGTTCACTGACTACACTGACACGGATGGTCTTTGGGAGA
CGGTAGATGATGACGGAGATGCCATCGACCAGACAGTATGGACCAGCGGA
ATGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACGGGAAACGACAC
ATGGGCGCGGAATGGTCGCCGGCATGTACTGGTACCAGTTCGAGCTCACG
GGAAACGACACATGGGCGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGA
AGGCGTGGAGGAGTTGGATGACAACGATCTTGGTTTTCAGGAGAAAGCCG
AATTCTTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGATGACAACGAT
CTTGGTTTTCAGGTACTCAACTCCTTCGGTCTAGGTTACAGGCTCTCGTC
GTCCAGCTCTCTCCGTGATGCTTACAAAGCGAGGGTGCTGACGGGCGCTG
AGTCGCTCTACGACTTTAGATGGACGGTACTCAACTCCTTCGGTCTAGGT
TACAGGCTCTCGTCGTCCAGCTCTCTCCGTGATGCTTACAAAGCGAGGGT
GCTGACGGGCGCTGAGTCGCTCTACGACTTTAGATGGACGGCCAACATCC
CCGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGT
GCCGTCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAG
TGTCAATGGAGGAAACACGACCTATGCGGAGAACGTCGCTGAGCCAACAT
CCCCGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGC
GTGCCGTCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCC
AGTGTCAATGGAGGAAACACGACCTATGCGGAGAACGTCGCTGATCACGC
CGACACCACGTGGAAAGACATCGTCCGTGACGACAACAGCACGTTCCACG
TAGCGGACTATGACCCCGATACCGGAGATCTTGTGGATCAAGTCACGCCG
ACACCACGTGGAAAGACATCGTCCGTGACGACAACAGCACGTTCCACGTA
GCGGACTATGACCCCGATACCGGAGATCTTGTGGATCAAGGGACGTACCA
AGGTTACGCTGACAACTCTACCTGGACAAGGGGGCAGGCCTGGGCCGTTT
ACGGAAACGTGATGATCTACCGCTACCTGCAGGAGCCTAAGTTCCTCGAG
CGATCGCTGGCCTGTCTCAAGGACGTACCAAGGTTACGCTGACAACTCTA
CCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGTGATGATCTAC
CGCTACCTGCAGGAGCCTAAGTTCCTCGAGCGATCGCTGGCCTGTCTCAA
GTACTTCGACGACAACCTGCCGAGCGATGGAGTCCCTCCCGCGGACTTCG
ATGCCCCGGTTTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCC
ATCGTCGCTTCCGCCCTCTTCGAGATATATGCCGAAACCGGTACTTCGAC
GACAACCTGCCGAGCGATGGAGTCCCTCCCGCGGACTTCGATGCCCCGGT
TTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCCATCGTCGCTT
CCGCCCTCTTCGAGATATATGCCGAAACCGGGGAGTCGAAGTACCTGACC
TGGGCGGAACAATACCTGTCTGCGGTTCTTACCGCCGACTACTACTTGCC
TGACGCCACCGATGGATACCAGTCCATCTTGCGCCGAGCGACGGCAAAGT
GGGGCGAGACGGAGAGGGGTGCCGTTTTCGGTGACTACTTTGTGCTCGAG
GCCATGGGGAGTCGAAGTACCTGACCTGGGCGGAACAATACCTGTCTGCG
GTTCTTACCGCCGACTACTACTTGCCTGACGCCACCGATGGATACCAGTC
CATCTTGCGCCGAGCGACGGCAAAGTGGGGCGAGACGGAGAGGGGTGCCG
TTTTCGGTGACTACTTTGTGCTCGAGGCCATGGTGCGATACAGGCAGTTG
ACGCGTTAAGTGCGATACAGGCAGTTGACGCGTTAA
back to top