mRNA_F-serratus_M_contig75.18772.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Match: A0A6H5KE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE27_9PHAE) HSP 1 Score: 676 bits (1744), Expect = 1.690e-226 Identity = 439/944 (46.50%), Postives = 524/944 (55.51%), Query Frame = 1
Query: 157 KGIRVPWSWTCRAIIEAVARYPSGLTEAIILAELELLWRKDVRGAFVPGKLRAYLDAQHAPLSDVIQAAIVRHSDQLVTIAEDHSGSVAAVGQSPTTAGMYLHQNFKSCLHFLQQAGHDLLAPGRRVRLTGCRMLMGTTINAGYGVGV-------RTSHGASG-STLLLTEYLAFVLDHRRLDDVKLAAGAFGSTRVRETFSEVSNEQPMFVLCKVVEIRRPRQYHQDRAAGPAQKKRLAVQTIVLECAVTGKRSRGERGAGGSEAAEGGAGDGGEETTVVLLQLWDEQMCLSSLFARGDGLAIYWPWVVEEGGEGMVKSSLGSSQQPSALHSQASANLMHQQGFSCEGFTPRLAE-WHYEYGSATALFVLPRDSREPLFAAAN-----------GCGALDSST------------AVTAARVNPREAL---RDTVTEVMRASEMPVDENGVRDLLQYPRRLSVADLCPNMSNASVYGQVVSVG-VPNAPLPAILVARRGTAGASLGSLSQPQSK------QLLQQPMNCAEGI----------------TVVEVVIRDAGGEARVLCFGREATADALGCRPGHFVLACGLRTLTPAFPPL---ESQPGDSIVIVCGEPEDFQQGSKTSSGDGSPGRRG-GARGGIGGGG---ISRILNVSRLEGLLHCPFMSRNVLLHFQKKCGKKPVATFACKVAVTWAQWAFAGDGLWAVHRLCRARLPCHYGDLDSSSGDSTKRKGSKRARDTREPGGIR---APRAQEVLVTCPLCKT----------------------------------------------RVRLACPEEVELAYAPLLLALDDGSRCIVAECLDEVVPAALGGINANVFLQLGDAERRATLAALIGRELRCVVGGNGSVAERDNTEGGGVSGGKGTYCWSGAE---YRVERIALANPAADLAHLL 2637
+G +VP +IE V RYPSGLTEA+ILAELELLWR+DVRGAFVPGKL+AYLDAQ+APLSDVIQA +VRHSDQLVT+ EDHS SV++ SP MYLHQNFK CL + Q GHDLLAPGR+VRLTGCR+L G R S G STLLLTEYLAFVLDHRR DD++LA G FG RV+ TF E SN + FV+CK G Q+ VL LWDEQ CL+SLF +GDGL +YWPW+V E GS+ P L SQ QQ S + PR + WH+EYGSATALFVLPR+SR LF+AAN G G S+ V + + R A+ R V EMP+DENGVRD+LQ+PRRL V DL PN+SNAS+YGQVVSV VP + LPAIL RG + S SLSQ K Q LQQ G+ VVE++IRD G ARVLC GR+A ADAL CRPG +VL CGLRT AFPP E P +V++CGE ED + ++ G+ GR GAR G GGG +S +LN S LEG LHCPF+SR+ LLH +++ P A+FACK AVTWA+W F GDGLWAVHR C ARLPCH+ L +S+ D +R KR RD REPG +R Q V V CPLC+ VR+AC +E EL YAPLLLALDDG+RC+VAEC VV AA GG+NA+ FLQ+ +AER+AT+ +L+GRE+RCVVGG G+ +E W GA RVERIA NPAADLA+L+
Sbjct: 4 RGPKVPKFRGHTTLIETVRRYPSGLTEAVILAELELLWRRDVRGAFVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHSCSVSS-NLSPAKVDMYLHQNFKPCLRYAQGVGHDLLAPGRKVRLTGCRLLTGAAXXXXXXXXXXXXXXXXRRSPNCGGPSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGQRVKNTFEEKSNYEEFFVICK----------------GRKQQHXXXXXXXXXXXXXXXXXRE-----------------------TVLFHLWDEQTCLTSLFRKGDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLPSQ-------QQLVSSQLPLPRASSGWHFEYGSATALFVLPRESRAQLFSAANEDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXVVASRKAFSRGAVVNGRGRGGTVGAVHEMPIDENGVRDVLQFPRRLFVTDLAPNLSNASIYGQVVSVASVPGSSLPAILPPSRGMSSLS-SSLSQLPLKPVMLMQQELQQLQQQESGMGLVAGRGAXXXXXXXXKVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPSDDSEQGPDGHVVVLCGEAEDMSREDAAAT-TGAEGRAAAGARAGEAGGGGDSVSGVLNTSSLEGFLHCPFLSRHSLLHDRRRT-PGPRASFACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASA-DPARRTSRKRQRDMREPGCVRNGGTGARQGVSVMCPLCQAGVSASLSSSQFTFVHDTAAAVLTVALISFCHWACVVARARRLLRQRSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVSAAFGGMNAHDFLQMDEAERKATVDSLVGREIRCVVGGGGAASEVXXXXXXXXXXXXXEGDWDGAGRVGLRVERIASVNPAADLAYLV 896
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Match: D7FQ83_ECTSI (CDC24_OB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ83_ECTSI) HSP 1 Score: 523 bits (1348), Expect = 6.860e-169 Identity = 372/929 (40.04%), Postives = 459/929 (49.41%), Query Frame = 1
Query: 61 MDWFETHCDRLRLKLQNVIDRGASYSK-ELGVRKGIRVPWSWTCRAIIEAVARYPSGLTEAIILAELELLWRKDVRGAFVPGKLRAYLDAQHAPLSDVIQAAIVRHSDQLVTIAEDHSGSVAAVGQSPTTAGMYLHQNFKSCLHFLQQAGHDLLAPGRRVRLTGCRMLMGTTINAGYGVGVRTSHGASG--------STLLLTEYLAFVLDHRRLDDVKLAAGAFGSTRVRETFSEVSNEQPMFVLCKVVEIRRPRQYHQDRAAGPAQKKRLAVQTIVLECAVTGKRSRGERGAGGSEAAEGGAGDGGEETTVVLLQLWDEQMCLSSLFARGDGLAIYWPWVVEEGGEGMVKSSLGSSQQPSALHSQASANLMHQQGFSCEGFTPRLAEWHYEYGSATALFVLPRDSREPLFAAAN-----------GCGALDSST-------------AVTAARVNPREAL---RDTVTEVMRASEMPVDENGVRDLLQYPRRLSVADLCPNMSNASVYGQVVSVG-VPNAPLPAILVARRGTAGASLGSLSQPQSKQLL--------------------QQPMNCAEGITVVEVVIRDAGGEARVLCFGREATADALGCRPGHFVLACGLRTLTPAFPPL---ESQPGDSIVIVCGEPEDFQQGSKTSSGDGSPGRRGGARGGIGGG----GISRILNVSRLEGLLHCPFMSRNVLLHFQKKCGKKPVATFACKVAVTWAQWAFAGDGLWAVHRLCRARLPCHYGDLDSSSGDSTKRKGSKRARDTREPGGIRAPRA---QEVLVTCPLCKTRVRLACPEEVELAYAPLLLALDDGSRCIVAECLDEVVPAALGGINANVFLQLGDAERRATLAALIGRELRCVVGGNGSVAE---RDNTEGGGVSGGKGTYCWSGAEYRVERIALANPAADLAHLL 2637
MDW + HCDRLR KLQ V+D GAS ELG +RVPWSWTCR +IE V RYPSGLTEA+ILAELELL G F +A P S S+ + + PT++ +F + ++ CR+L G STLLLTEYLAFVLDHRR DD++LA G FG RV++TF E SN + FV+CK GDGL +YWPW+V E GS+ P L SQ + Q + F WH+EYGSATALFVLPR+SR LF+AAN G G S+ V + + R A R V A EMP DENGVRDLLQ+PRRL V DL PNMSNAS+YGQVVSV VP + LPAIL RG + +S SLSQ K ++ VVE++IRD G ARVLC GR+A ADAL CRPG +VL CGLRT AFPPL E P +V++CGE E+ + ++ D + GR +S +LN S LEG LHCPF+SR+ LH +++ P A+ ACK AVTWA+W F GDGLWAVHR C ARLPCH+ L +S+ D +R KR RD REPG +R+ R Q V V CPLC++ VR+AC +E EL YAPLLLALDDG+RC+VAEC VV AA GG+NA+ FLQ+G+AER+AT+ +L+GRE+RCVVGG+G+ +E RVERIA NPAADLA+L+
Sbjct: 1 MDWVQEHCDRLRSKLQGVVDSGASSGAGELG----LRVPWSWTCRTLIETVRRYPSGLTEAVILAELELLCEGG--GTF---------EAPSCPESF-------------------RPISMRSTPRCPTSSR---RASFATLTNW-------------------CRLLTGAXXXXXXXXXXXXXXXXXXXXXXXXXXSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGLRVKDTFEEKSNYEEFFVVCK-----------------------------------------------------------------------------------GDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLSSQQQL-VSSQLPLPSDSFG-----WHFEYGSATALFVLPRESRAQLFSAANNDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXXVVVSRKATSRGAGVDGRGRGGTVGAAHEMPADENGVRDLLQFPRRLFVTDLAPNMSNASIYGQVVSVASVPGSSLPAILPPSRGMSSSS-SSLSQLPLKPVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPLDDSEQGPDGHVVVLCGEAEEMSREDAAATTD-AEGRAAXXXXXXXXXXXXDSVSGVLNTSSLEGFLHCPFLSRHSFLHDRRRT-PGPRASLACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASA-DPARRISRKRPRDMREPGCVRSGRTGAQQGVSVICPLCQSSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVTAAFGGMNAHDFLQMGEAERKATVDSLVGREIRCVVGGDGAASEVXXXXXXXXXXXXXXXXXXXXXRVGLRVERIASVNPAADLAYLV 780
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Match: UPI00106BFA99 (uncharacterized protein LOC114525665 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BFA99) HSP 1 Score: 68.2 bits (165), Expect = 5.960e-8 Identity = 105/472 (22.25%), Postives = 170/472 (36.02%), Query Frame = 1
Query: 127 ASYSKELGVRKGIRVPWSWTCRAIIEAVARYPSGLTEAIILAELELLWRKDVR-----GAFVPGKLRAYLDAQHAPLSDVIQAAI-----VRHSDQLVTIAEDHSGSVAAVGQSPTTAGMYLHQNFKSCLHFLQQAGHDLLAPGRRVRLTGCRMLMGTTINAGYGVGVRTSHGASGSTLLLTEYLAFVLDHRRLDDVKLAAGAFGSTRVRETFSEVSNEQPM--FVLCKVVEIRRPRQYHQDRAAGPAQKKRLAVQTIVLECAVTGKRSRGERGAGGSEAAEGGAGDGGEETTVVLLQLWDEQMCLSSLFARGDGLAIYWPWVVEEGGEGMVKSSLGSSQQPSALHSQASANLMHQQGFSCEGFTPRLAEWHYEYGSATALFVLPRDSREPLFAAANGCGALDSSTAVTAARVNPREALRDTVTEVMRASEMPVDENGVRDLLQYPRRLSVADLCPNMSNASVYGQVVSVGV 1506
+ + + LG I PW W ++ ++RYP+G+T+AI+L+ELE WRK + G LR+ + ++H V + + V + V + +H S + T MYLHQ L ++A G ++R TGCR+ G +L L +FV V + GA + E E+ + Q + + KV EI + H Q A + VL G +++ L LW+E + ++ LF GD L + +++ + E FT E+G T +F P + + + RD ++V S+ D G+ D YP RLS++++ NMSN ++ GQVVSVGV
Sbjct: 11 SEFQQRLGTTTSI--PWGWFFTKLVTLLSRYPTGVTKAIMLSELECSWRKIEKLQAKGGMNSADSLRSIVLSRHLSPQAVFEVFLKEVKNVEATQTRVAVLMEHETS----SEHSFTMEMYLHQK-------LYGEVEQIMANGYKLRFTGCRLF----------------DGRRNKSLKLLPSESFV--------VLVNDGAIHNFTTLEGLDEMIDSQYINSIIKVKVSEISMKKSIH-------CQNGHTANRITVLVSDDIGIQAK--------------------------LNLWEEYLVMAKLFEAGDTLFMKQCFLLPD---------------------------------KSECFT-------LEFGPETIIFCQPLTHEQEIL-----------------------PSQRDG-SKVFYVSK---DNRGMLDFSMYPERLSISEINQNMSNITLTGQVVSVGV 345
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Match: A0A3M6UYZ5_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UYZ5_POCDA) HSP 1 Score: 59.7 bits (143), Expect = 2.540e-5 Identity = 76/307 (24.76%), Postives = 124/307 (40.39%), Query Frame = 1
Query: 172 PWSWTCRAIIEAVARYPSGLTEAIILAELELLWRK--DVRGAFVPGKLR-----AYLDAQHAPLSDVIQAAIVRHSDQLVTIAEDHSGSVAAVGQSP---TTAGMYLHQNFKSCLHFLQQAGHDLLAPGRRVRLTGCRMLMGTTINAGYGVGVRTSHGASGSTLLLTEYLAFVLDHRRLDDVKLAAGAFGSTRVRETFSEVSNEQPMFVLCKVVEIRRPRQYHQDRAAGPAQKKRLAVQTIVLECAVTGKRSRGERGAGGSEAAEGGAGDGGEETTVVLLQLWDEQMCLSSLFARGDGLAIYWPWVV 1062
PW+W + ++RYPSG+T+AIILAE++ W + +G + R + +++ +++AA+ + + T+ + H+ +A + S T GMYLHQ L+ L ++ L +R T CR++ G G+ S + LL +E + + L L G FGS + S V +V ++ H G KR V++ + V L LWDEQ+ L++LF GD LAI P+VV
Sbjct: 24 PWNWLFIKLASLLSRYPSGITKAIILAEIQQSWNQHSQFQGLLEEQRARKVSVDSVFESRRIGYESILEAAV----ENIETVPDTHT-KIAILRDSTRGRNTLGMYLHQK----LYQLNESSVKKLT----LRFTSCRLIQGK--------GLSFSSASHKVHLLPSENVVILCQQDEL----LQFGKFGS--LENINVSPSPHYGHSVKVEVADLGFEEAVHFPN--GQTSNKRCVK---VVD----------------------------SDDVHVNLYLWDEQLPLANLFKEGDILAIQQPYVV 270
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Match: UPI00077AD99D (uncharacterized protein LOC107341862 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD99D) HSP 1 Score: 58.9 bits (141), Expect = 3.930e-5 Identity = 44/149 (29.53%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 175 WSWTCRAIIEAVARYPSGLTEAIILAELELLWRK--DVRGAFVPGKLR-----AYLDAQHAPLSDVIQAAIVRHSDQLVTIAEDHSG-SVAAVGQSPTTAGMYLHQNFKSCLHFLQQAGHDLLAPGRRVRLTGCRMLMGTTIN-AGYGV 594
W+W ++ ++RYPSG+T+AIILAE++ W + +G F K R + +++H +++A + +++ T+ H+ ++ + T GMYLHQ K CL LQ+ L +R T CR++ G ++ AG+ V
Sbjct: 25 WNWLFVRLVSLLSRYPSGITKAIILAEIQQSWNQFSQFQGRFEEQKARKVSVDSVTESRHIGYESILEATV----EKIETVPGTHTNIAILRDRKGRNTLGMYLHQ--KLCL--LQEE----LIKKLTLRFTSCRLVQGKGLSFAGHKV 161 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18772.1 >prot_F-serratus_M_contig75.18772.1 ID=prot_F-serratus_M_contig75.18772.1|Name=mRNA_F-serratus_M_contig75.18772.1|organism=Fucus serratus male|type=polypeptide|length=862bp MDWFETHCDRLRLKLQNVIDRGASYSKELGVRKGIRVPWSWTCRAIIEAVback to top mRNA from alignment at F-serratus_M_contig75:814419..823536+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18772.1 ID=mRNA_F-serratus_M_contig75.18772.1|Name=mRNA_F-serratus_M_contig75.18772.1|organism=Fucus serratus male|type=mRNA|length=9118bp|location=Sequence derived from alignment at F-serratus_M_contig75:814419..823536+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:814419..823536+ >mRNA_F-serratus_M_contig75.18772.1 ID=mRNA_F-serratus_M_contig75.18772.1|Name=mRNA_F-serratus_M_contig75.18772.1|organism=Fucus serratus male|type=CDS|length=5172bp|location=Sequence derived from alignment at F-serratus_M_contig75:814419..823536+ (Fucus serratus male)back to top |