mRNA_F-serratus_M_contig75.18763.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 996 bits (2576), Expect = 0.000e+0 Identity = 668/1021 (65.43%), Postives = 733/1021 (71.79%), Query Frame = 2
Query: 50 MAQSPTPADLVRKLSDRI-----STYVKGSGKVPLKLLRWALGELEECARNQSLPSAKVMEVVNAAIKDDPHPRLLASAANAGRRQSAAVDEAVPNVVGAVASSRSAAKPLGVSGACSGPNGSGSSGGA-------------GKGAVVFTPLYGCDETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLT--------EVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALL-KQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGG---------------------DLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSV---------------------QGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAV-RDARKTGGXXXXXXXRHATSAGDEDSSGD-GNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGGAPLLCAKPQEERVGHPAMFLSVGDVHIV-QLQQALEQAGVNVKFLARTLRCEG 2896
MAQ A L LS R+ +T GK PLKLL+WAL +LEECAR +S+P++ V+EV AAIKD+ AG +Q P G A SA + G S +GS S KG VVFTPLYGCDE GV PV SILEVGGVTILLDCGWDIHFDTALLEPL VVKR+DLVLISHPDLEHLG LPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISR+HE NFQAFDLDDVD+AFARFKTLK+SQHLTFS RGAG+TITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN+ ERHLR SAL TLTRPSVLITDAHN+LT RK RE LISTVMDTVRGGGNVL+PTDTAGRVLELLVLL+++WQKHRLG YKLVLLHNTA+NT EFAKSQLEWMSEDIGRAFDLQR+NPFELRNVHIMHSLEELDELG+DPKVV+A+DMSLD+GFSKALLLRWASG NTILLTGRGHG TTAR L+ K +A AAAK A RGA G+ G + + V VPVRVPL+GEEL+AFR+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IVASLFSKYSKPQHLMFGYYDP +PTDEYGVKE++PIGWLAAAMQQQNSEMPAA+ XXXXXXXXXXXXXXXXXXXXXXXXX + +DALRA AG GKESAFFQDSGAVPTKLEQE Q +EVLCRVV+VDSEGLSDG S+KNT LAPKMLIV GGSRRAKA+LVS+VR ++ A R A XXXXXXX D R+VVV++A+EP+PV LDSGAFDVLLHDSLHT LKWKQL NY VAH+ECRV P G PLLCAKP+ ERVGHPAMFLSVG V++ Q+ Q ++ F++ RC G
Sbjct: 1 MAQPLDAARLAHDLSKRMMNHHGATAAAVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDE-------MGVPAGEQQ--------PPAAGVAAHPASAPRTSG-----SAVDGSSSXXXXXXXXXXXXXXXXRSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGAR-VGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRA--IVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVRHAVEPAAAGRRAXXXXXXXXXXXXXXXXXXXXXXXXXDVACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLDNYGVAHVECRVDPRGDVPLLCAKPRAERVGHPAMFLSVGKVNVTPQILQVNWLETISQSFMSHH-RCLG 997
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 673 bits (1737), Expect = 9.760e-223 Identity = 426/879 (48.46%), Postives = 540/879 (61.43%), Query Frame = 2
Query: 434 VVFTPLYGC-DETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEEN--FQAFDLDDVDSAFARFKTLKYSQHLTFSD--RGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLT-EVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGG--KESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPG---GGA--------PLLCAKPQ---EERVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTVRMEGTRL-ELEGPLCDAYFRVRQVVYQQYTVV 3001
V FTPLYGC D+T G GPVCS+LEVG VTILLDCGWDI FD +LL PL +VV RVDLVLISH DLEHLG LPYA GKLG++A V+ATLP KMGQM VYDA+ RS E N F+AF LDD D+AF RF+ LKYSQHL FS+ RGAG+TITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH+ E HL A+ TL+RPS++ITDAH LT + + R L V TVR GGNVL+P DTAGRVLELL+LLD HW +++LG Y LVLLH+ A+NT EFAKSQLEWMS+ I + FDLQR+NPFE+R+V + HSLEEL LG P VVLA+D+SLD+GF+KALLL WA+ N +LLT RGHG + AR LL+ V +AAA A G +EE I V+VP RVPL GEEL A+ EEXXXXXXXXXXXXXXXXX XXXXXXXXXX + ASLFSK+SKPQHLMFG++D + D+YGV+E++PI WLA +MQ++N + I E G R S G + A A A +SAF++D+G +P+K+ +E+ + V RV ++D EGLSDGRS++N + + P+ L+++GGS +A + L DAR RH SA V R+ + + LD+ FDVL+HDSL+T+L+W+ +K YE+A ++ V P G P + PQ E G PA+F+S GDV + QL AL +AG+ A L G + V L +++GPL D YF VR ++Y+QYT+V
Sbjct: 48 VTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVTAHVRAAAAA--------------------GGVEEA------PKQRIVVEVPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERN-DTSGLIHEEGQRR-----------LLEQQATAAHLSSAMQVVGLSDADGAVSAATAAAQTALRSDSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSE------------DARD----------RHICSA------------VFTPRSGDTVRAALDTDVFDVLVHDSLYTRLRWQSVKGYELAQVDSAVAPQPRPSGVLGKRERPPPPILFPPQDREEGETGRPAVFVSFGDVQLTQLSTALRKAGMTTALAAAKLTVSGTIVVTKGADGLLKIDGPLSDTYFAVRSIMYRQYTIV 854
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 414 bits (1064), Expect = 1.910e-125 Identity = 279/855 (32.63%), Postives = 405/855 (47.37%), Query Frame = 2
Query: 440 FTPLYGCDETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLK-NYEVAHMECRVGPGGGAPLLCAKPQEERVGHPAMFLSVGDVHIVQLQQALEQA-GVNVKFLARTLRCEGGVTVRMEGTRLELEGPLCDAYFRVRQVVYQQYTV 2998
F PL G V G P+C +LEV LLDCGWD + L+ L A V++VD VL+SH D +HLGALPYA GKLG+ VYATLPV KMGQM +YD Y+S+ EE ++ F+L+DVD AF F ++Y+Q + + +G GITITP+ AG +G WR++ + ED I+YA YNH+ ERHL +AL T RP+VLITDA+N LTE SRK R+ L++ VM T+R GGNVL+P DTA RVLELL++LD HW+ ++G+Y LVLL+N AYN EFAKS LE+M+ DI ++F+ R+N F+ +NVH+ HSLEEL+EL + PKVVLAS SL+ G + LL+ WAS N IL R T + + + D ++ E L +++K+ R L EL F+E +++ F +F + + + DEYG EM E AG ++G LD G+++ ++S PTK+ EE V + + ++D EG SD RSIKN V + P+ LI++ GS A L SH L + V + LEP+ + S ++ + L + +++ ++ NY+VA ++ + L P + + + VG+ + +L++ ++ ++V F+ L C V +R +G+RL G L Y+RVR VVY QY +
Sbjct: 18 FVPLCG----VHGQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYM-------------------------------------DSDETEDLQMRIKMGHREALDEVELVEFQEAEEARKEEELLADAVYGDAGLDIMDIEEGNEKAGGIQEKARAVG--------QVLIEGFETPEGAVAPLFPFPEEDVERDEYG-------------------EMLDPAEFAG------------------------DEDPSPTSAPEGLEGQLD--------GEDATMLEES---PTKVVVEEMDVIIRASLQYIDFEGRSDERSIKNIVTQVQPRQLILVHGSPEATQGLKSHFETVL------------------------------------KSVHAPQPLEPVTIDSVSASYRLRLTEDFMRMVRFSRVAGNYQVAWVDGELKEEEVGSGLALVPNQGALQAVQKAVFVGETRLAELKEIIQSTLNLSVHFIPGGLVCGDRVVIRKQGSRLSFHGALSQEYYRVRDVVYAQYHI 731
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: A0A2R6XNT6_MARPO (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XNT6_MARPO) HSP 1 Score: 414 bits (1064), Expect = 2.730e-125 Identity = 280/866 (32.33%), Postives = 410/866 (47.34%), Query Frame = 2
Query: 413 GGAGKGAVVFTPLYGCDETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHL---MFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGG--APLLCAKPQEERVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTVRMEG-TRLELEGPLCDAYFRVRQVVYQQY 2992
GG G +V TPL G P+C +LEV G LLDCGW FD A L+PL +V +D VL+S+PD HLGALPYA G LG+ A VY TLPV +MGQM +YD Y+SR NF F+LDDVD+AF LKYSQH +G GITITPYAAGR++G VW+++ TED I+YA +NH+ ERHL + L + RP+VLITD++N+L +K R+ + VM +R GGNVL+P +TAGRVLEL++ LD+ W +L Y + LL N +Y+T EFAKS LEWMS+ I ++F+ R+N F L+ + + H+ ++LD+L PKVV AS SL+ GF++ L + WA+ N +L T RG T +R L + P ++V + +VPL+GEEL+A E+ V L ++ P + MF +++ DEYG + P +++ +E+ + + QGP A G E + P+K+ E+ V+V C + ++D EG SDG+SIKN + ++AP L+++ GS A L H +K ++V R E + + D A+ V L + L + + +++L +YE+A ++ VG PLL P H A++ VGD+ + +Q L GV +F LRC + VR G +L +EGPL + Y+R+R+++Y Q+
Sbjct: 15 GGMGSSSVQITPLSGAHSE----SPLCYLLEVDGFRFLLDCGWTDAFDVAQLQPLASVASTIDAVLLSYPDTMHLGALPYAVGNLGLTATVYCTLPVHRMGQMYMYDHYLSRRAVSNFDLFNLDDVDTAFGNSVQLKYSQHHLLQGKGEGITITPYAAGRLLGGTVWKITVDTED--IIYAVDFNHRKERHLNGTVLQSFVRPAVLITDSYNALNNQPLQKQRDAEFLDVVMKALRAGGNVLLPVETAGRVLELVLYLDKCWAGDKLN-YPMALLTNVSYSTLEFAKSLLEWMSDAIAKSFEHTRDNSFVLKYLKLCHTRKDLDDLPAGPKVVFASMASLEAGFARELFVEWATDPNNLVLFTERGQVGTLSRKLQAEPP------------------------------------------PKVVKVTLSKKVPLTGEELKAHEEQNRSKQEALKASVPVEETGSQLSGGSGPAPAVTVEPVKASEGTNKFTSGASQRDV--LIEGFTMPPNSVAPMFPFHERASDWDEYG-EIINPDDYISK------------VED-------------------------------MMDYTLTQQGPTAEGEEKADGENEDLILNEK---PSKVVLEDITVQVRCSLHYMDYEGRSDGKSIKNILAHVAPLKLVLVHGSAEATEHLRQHCQKNFC-----------------------------------QFVYAPRLSETVDITSDLSAYKVRLTEQLMSNVLFRKLGDYELAWVDGEVGAEEDDMLPLL---PAATPPPHKAVY--VGDLWLADFKQLLATKGVQAEFAGGLLRCGENIAVRKSGGQQLVIEGPLSEDYYRIRELLYSQF 742
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: A0A2K1K2T2_PHYPA (Cleavage and polyadenylation specificity factor subunit 2 n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K2T2_PHYPA) HSP 1 Score: 395 bits (1014), Expect = 3.110e-118 Identity = 272/868 (31.34%), Postives = 400/868 (46.08%), Query Frame = 2
Query: 431 AVVFTPLYGCDETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFR--------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAV----PTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGGAPLLCAKPQEERVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTVRMEG--TRLELEGPLCDAYFRVRQVVYQQY 2992
+V TPL G P+C +L+V G LLDCGW FD +LLEPL +V +D VL+S+PD HLGA YAF KLG++A +Y TLPV MGQM +YD +SR NF F LDDVD++FA LKY QH +G G+TITPYAAG ++G +W+++ TE+ I+YA +NH+ ERHL + L RP+VLITDA+N+L RK R+ I ++ +R GNVL+P +TAGRVLEL++ L+ +W RL Y + LL N +Y+T EFAKS LEWMS+ I R+F R N F L+ + + H +E DEL + PKVV AS SL+ GF++ L + WA+ + N +L T RG T A+ L + P ++V + ++PL+GEEL+A+ E +I+ F+ K MF Y+ DEYG + P + +++EM SS Q P+ + E Q++ A+ P+K+ ++ V V C + ++D EG SDGRSIKN + ++AP L+++ GS A+ H+R+ + RD V R E V D A+ V L + L + + +++L +YEVA ++ +G +L P E H ++F VGD+ + +Q L G+ +F LRC VR G +L +EGPL + Y+++R ++Y Q+
Sbjct: 4 SVQVTPLSGAHSEA----PLCYLLQVDGFRFLLDCGWTDSFDLSLLEPLKSVAPTIDAVLLSYPDTIHLGAFTYAFAKLGLQATMYCTLPVHHMGQMYMYDHVLSRKAVSNFDLFTLDDVDTSFANSVQLKYQQHYQLQGKGEGMTITPYAAGHLLGGTIWKITKDTEE--IIYAVDFNHRKERHLNKTVLENFVRPAVLITDAYNALNNQPPRKQRDQEFIDMILKVLRAEGNVLLPVETAGRVLELILHLESNWAHQRLS-YPVALLTNVSYSTVEFAKSLLEWMSDSIARSFGSSRENSFLLKYLKLCHDRKEFDELPSGPKVVFASMASLEGGFARDLFVEWATDSRNLVLFTERGQMGTLAKKLQAEPP------------------------------------------PKIVKVTMSQKIPLTGEELQAYELEQRLKMATETEVDLVEEVGPNSPEAKAVTGPLPLTVAEPGGGVPLGVEGSLATNEIPSQRQILIDGFTASDKTAGPMFPLYENPSDWDEYG-EVINPEDYRV-----EDTEM--------------------------------------MDYQSSQQAPVADV--------EDNTDQEAEAILADRPSKVVVKDYTVYVKCALYYMDFEGRSDGRSIKNILAHVAPIKLVLVHGS----AEATEHLRQHCVKNVCRD-------------------------------VYAPRIGETQDVTSDLCAYKVRLTERLMSSVLFRKLGDYEVAWIDGEIGSQESEGMLPLLPSETPPPHKSVF--VGDLRLADFKQLLATKGIQAEFAGGVLRCGDAFAVRRSGGSQQLVIEGPLSEEYYKLRDLLYSQF 733
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: B3S6C6_TRIAD (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6C6_TRIAD) HSP 1 Score: 388 bits (996), Expect = 1.460e-115 Identity = 268/872 (30.73%), Postives = 401/872 (45.99%), Query Frame = 2
Query: 482 GPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHR-LGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSG--AVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGGA----------------------------PLLCAKPQEERVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTVRMEGT-RLELEGPLCDAYFRVRQVVYQQYTVV 3001
GP C +L+V LLDCGWD +FD ++E + + ++D VL+SHPDL HLGA+PY GK ++ +YAT+PV KMGQM +YD ++SR+ E+F F LDD+D AF+R LKYSQH+ + +G G+TITPYAAG M+G +W++ E+ DI+YA YNHK ERHL S L TLT PS+LITDA+N+ R+ R+ +LIS V++ +R GGNVL+ DTAGRVLEL +LLD W+K L Y + LL++ +YN EFAKSQ+EWM + + AF+ RNNPF+ + + + HSL EL L +PKVVLAS L GF++ L L+WA + N + TGR T R +L DE P +I V V RV LSG EL + ++ +S F K H M+ + + +I DEYG + P + + +++ P + + +F + G +PTK + +++ CR+ +D EG SDG SI+N + + P+ L+++ GS A +L G+ R +++ G R V + + +S + V L DSL + L + K+ E+A ++ RV P+L Q E GH ++F++ D + L+Q L +AG+ +F+ + C + VR T ++ LEG +C+ Y+ VR ++YQQY ++
Sbjct: 17 GPPCYLLQVDEFNFLLDCGWDENFDMEMMERVKRHIHQIDAVLLSHPDLLHLGAIPYLVGKCQLKCPIYATVPVHKMGQMFMYDLFLSRNDYEDFDLFSLDDIDDAFSRITALKYSQHVHLTGKGNGLTITPYAAGHMVGGTIWKIIKDGEE-DIIYAVDYNHKKERHLNGSVLETLTHPSLLITDAYNAQYNQAKRRDRDQKLISRVLNALRSGGNVLIAVDTAGRVLELSLLLDHLWRKDPGLSAYPIALLNHVSYNVVEFAKSQVEWMCDKVLVAFEDNRNNPFQFKYIQLCHSLNELSGLP-EPKVVLASSPDLTCGFARDLFLQWAGNSKNLTIFTGRSSPGTLGRHIL-------------------------------------------DERPQSIDVTVKTRVELSGNELEEYLQKEREKEKVKELDGLKFVTIDSDDELTTITGGYHTGKVKRDLMIKDDDRR------SSFFKK--AVVHPMYPFSETRIKWDEYG-EIINPEDFTLIDVSEEDK-------------------------------------------------PKKVTHS------DRHYFLNKGNPKIPTKCVSFLKHIDINCRISLIDFEGRSDGESIRNILSLVNPRHLVLVRGSSAAVQEL---------GNFCRQSKEMG-----------------------VRKVFTPVVGQTVDATFESHLYQVRLRDSLVSSLYYCNAKDAELAWVDGRVTVTAKGHERLLDKNNKNEDEAMDTDNTSITEAVVPILEPLLQSEIPGHKSVFIN--DPRLSDLKQTLTKAGIQAEFVGGVIVCNDKIAVRRTETGKITLEGAICNDYYTVRDILYQQYAII 745
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: A0A8B7XQQ2_ACAPL (Cleavage and polyadenylation specificity factor subunit 2 n=4 Tax=Asteroidea TaxID=7588 RepID=A0A8B7XQQ2_ACAPL) HSP 1 Score: 384 bits (987), Expect = 4.840e-114 Identity = 272/899 (30.26%), Postives = 409/899 (45.49%), Query Frame = 2
Query: 434 VVFTPLYGCDETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGV--YKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGA-VPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRV---------------------------GPGGGA------------PLLCAKPQEERVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTV-RMEGTRLELEGPLCDAYFRVRQVVYQQYTVV 3001
+ TP G VG P C +L+V LLDCGWD F+ +E L V ++D +L+++PD HLGALPY GK G+ +YAT+PV+KMGQM +YD Y SR + E F F LDDVDSAF + LKYSQ +G G+TITP AG MIG +WR+ E+ +I+YA YNHK ERHL L +L+RPS+LITDA N+ R+ R+ +L++ +++T+R GNVL+ DTAGRV+EL +LLD+ W+ G+ Y L +++N +YN EFAKSQ+EWMS+ + R+F+ +RNNPF+ +++ + HSL+EL ++ +PKVVLAS L G+S++L + W N+I+LT R T AR+ + +Q+ E I++K+ RV L EEL +R++ + F K++K MF +++ +I DEYG + +P ++ M Q E A E+ G + ++GA +PTK E +EV C V F+D EG SDG SIK + + P+ LI++ GS A L + R QL G V E + ++S + V L DSL + L++ + K+ E+A ++ ++ PG G P+L A P +E GH +F++ L+Q + + G+ +F L C V + R + R+ LEG L YF+VR+++Y+QY ++
Sbjct: 5 IKLTPFSG----VGDESPPCYMLQVDEFRFLLDCGWDESFNLDYIENLKKHVHQIDAMLLTYPDHLHLGALPYIVGKCGLTCPIYATIPVYKMGQMFMYDLYQSRHNSEEFDLFTLDDVDSAFDKIIQLKYSQSTNLKGKGHGLTITPLPAGHMIGGTLWRIVKDGEE-EIIYAIDYNHKKERHLNGCVLESLSRPSLLITDAFNATYVQARRRLRDEQLMTIILNTMRRDGNVLIAVDTAGRVVELSLLLDQLWRNTESGLSPYSLAIINNVSYNVVEFAKSQVEWMSDKVMRSFEDKRNNPFQFKHLKLCHSLKELAKVP-EPKVVLASVPDLQCGYSRSLFVDWCDNPKNSIVLTCRSSHGTLARSFIDNIQQKE------------------------------------------IKLKLSKRVKLDPEELEQYRQKEKERKAAEKMRKGTDMDSSDESEEEMEIGEVGGHKGSKKFIQHDLMLKAESGKKGTSFFKHAKKSFPMFPFHEERIRWDEYG-ELIKPEDYMVTEMAQAEEEKTKAEED----------------------------------------------------GFDGEDVGEAGADIPTKCVSREVTLEVKCSVNFIDFEGRSDGESIKKLISQVKPRQLIIVHGSEEATQHLAEYCRLQLAGTKV----------------------------------FTPSINETMDATMESHIYQVRLKDSLVSSLEFSKAKDAELAWIDGQLDLPTPHLGVVKEQTGTTEEEGSEVKIKAPGLGIGKDTSADTDEIIPMLGAIPLQEVPGHYQVFVNAPKFQ--DLKQVMSRNGIQAEFSGGVLVCNSLVAIKRNDSGRITLEGCLSPDYFKVRELLYEQYAII 766
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD) HSP 1 Score: 384 bits (985), Expect = 5.100e-114 Identity = 271/874 (31.01%), Postives = 423/874 (48.40%), Query Frame = 2
Query: 434 VVFTPLYGCDETVGGVGPVCS-ILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEE-NFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGVYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTA-RALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEEL--------RAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYG---VKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHM--ECRVGPGGGAPLLCAKPQEE-RVGHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTV-RMEGTRLELEGPLCDAYFRVRQVVYQQYTVV 3001
+ FTPLYG + P C+ +LE+ V ILLDCGW +DT LL+PL V+ R+DLVLISH DL H+GALPYA GKLG++A +Y TLPV +MGQ+A+YDAY +++ + +F F LDDVD+ F FK LKYS+ LT + G GI ITP+ AG +IG ++WR+ +T+D I+YA YNH++E L+ + L + TRP++LITD+ N +E K R+ +++ ++ TVRGGGNVL+PTD++GRVLEL+ +LD++W +++L + LLH+ +Y T + A++ LEW +E I + FD+ R NPF+ ++H++HSLEELD L + PKVVL + SL+ GF+K L +RWAS N+I+ T T+A + +V +L GD T+ V +V L G EL + R E ++ F+ P MF +P+I DEYG V + L A Q + + + A +A QE + + PTK E + V R+ VD +G++DGR+I+N + N+ P+ LI++ G+ ++L V + + +A V +E + + D+ + + + +SL+T + ++++ +EVA++ + V P+L + R H + LS G + + ++Q L +AG N KF L C GV + R + +EG L +Y+R+RQ++Y+Q+T+V
Sbjct: 4 ITFTPLYGVHSS----DPCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNLPS-PKVVLTTSSSLECGFAKDLFIRWASDQRNSIIFT-----CTSAPNSFATRVIQLGS----------------------------NRSGD------RTLTCMVTQKVFLEGAELALHEAKERKRLRIEAEHKAKEMEEAAMEDMMMGIEDYESEEEEEDSVKEGSKANWFWVAQLRGTFKVGLGQFAAVRYP---MFFATEPKIEWDEYGEVIVPDDFKDATLLANRQARRNLIEDADGDAEMENQEE---------------------------------------------------EQADTRPTKTVTSEMTIHVAARITHVDFDGVADGRAIRNCLSNVKPRKLILVHGTEDTTSELKRFVESSIP---MCEA------------------------------VFTPNVMECIDIESDTNVYKLAVKESLYTSVVFRKVGTHEVAYVTGQLAVTENSSVPVLQNMGEHGGRTLHEPILLSDGKMKLDVMKQVLGKAGFNAKFRGGMLVCNDGVVLKRALNNEIVMEGALSSSYYRIRQLLYEQFTLV 743
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: UPI001ED8A0CB (probable cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A0CB) HSP 1 Score: 381 bits (978), Expect = 1.250e-112 Identity = 272/881 (30.87%), Postives = 409/881 (46.42%), Query Frame = 2
Query: 485 PVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGV--YKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAF-------REEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYG-VKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGGAPLLCAKPQEERV------------------------------GHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTV--RMEGTRLELEGPLCDAYFRVRQVVYQQYTVV 3001
P C IL+V LLDCGWD FD ++ L V ++D VL+S+PD HLGALPY GK G+ +YAT+PV+KMGQM +YD Y SR + E F F LDDVD+AF + LKY+Q + +G G+TITP AG MIG +W++ + + DIVYA +NHK ERHL L L RPS+LITDA+N+ + R+ R+ +L++ ++ T+R GNVL+ DTAGRVLEL +LD+ W+ G+ Y L LL+N +YN EFAKSQ+EWMS+ + R F+ RNNPF+ R++ + HS+ EL + + PKVVLAS ++ GFS+ L L+W S N+I++T R T +R L +E GG G P+T+++K VR L G EL + +E I F K SK QH MF +Y+ ++ DEYG + + + + ++++ I+E + P+ D VPTK + + V C+V F+D EG SDG S++ + L P+ +I++ G++ A A + +H R+ + D + GG A + G+ VVD E + + V L D+L + L++K+ K EV+ ++ ++ G A+P EE GH +F++ ++ + +Q L + G+ +F L C GG+ R E R+ LEG L + Y+RVR+++Y+QY +V
Sbjct: 18 PPCYILQVDEFRFLLDCGWDETFDQDFIKELRRYVNQIDAVLLSYPDPLHLGALPYMVGKCGLNCPIYATIPVYKMGQMFMYDLYQSRHNMEEFDLFTLDDVDAAFDKIVQLKYNQSVPMKGKGYGLTITPLPAGHMIGGTIWKIV-KVGEEDIVYAADFNHKKERHLNGCELERLQRPSLLITDAYNATYQQARRRTRDEKLMTNILQTLRNNGNVLLAVDTAGRVLELAHMLDQLWRNKDSGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRTFEGARNNPFQFRHLQLCHSIAELGRVPS-PKVVLASMPDMECGFSRDLFLQWCSNPLNSIIITNRTSPGTLSRQL------------------------------------IENGGGGR---PMTLEIKRRVR--LEGAELEEYLRKEREAKESRRPDRGEVVDSSDESEDEMDITKHDLMVKTEHGADLSGAVLGSVGGGKITTPISGGFFFKSSKKQHPMFPFYEEKVKFDEYGEIIRPEDYKMVEVNPEAEDNKENFEIKE--------------------------------------EEIPV-------------VTTADITEVPTKCIASIRTIRVACQVQFIDFEGRSDGESLQKILAQLKPRRIILVRGTKEATAAMAAHCRQWAGEEDGMDGKDGGGIGRVF----APARGE-----------VVDATTE-------THIYQVRLTDALVSSLEFKKGKEAEVSWLDAQIADTEGE--RDARPMEEDEEDSKMSSEKKNILKTDQIYTLEPLAANQVPGHQTVFIN--ELKLSDFKQVLIKHGIPSEFSGGVLWCCGGILAVRRHEAGRVVLEGCLSEEYYRVRELLYEQYAIV 778
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Match: T1J0U4_STRMM (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J0U4_STRMM) HSP 1 Score: 378 bits (971), Expect = 6.290e-112 Identity = 268/894 (29.98%), Postives = 398/894 (44.52%), Query Frame = 2
Query: 434 VVFTPLYGC-DETVGGVGPVCSILEVGGVTILLDCGWDIHFDTALLEPLVAVVKRVDLVLISHPDLEHLGALPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRSHEENFQAFDLDDVDSAFARFKTLKYSQHLTFSDRGAGITITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGRVLELLVLLDEHWQKHRLGV--YKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRNNPFELRNVHIMHSLEELDELGNDPKVVLASDMSLDYGFSKALLLRWASGNGNTILLTGRGHGATTARALLKQVQELEKAAAMAAAKANVTAGRRGAGGAGFDGGDLEEGGDGEDEEPLTIQVKVPVRVPLSGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVASLFSKYSKPQHLMFGYYDPQIPTDEYGVKESQPIGWLAAAMQQQNSEMPAAIEEAGAARQEARGXXXXXXXXXXXXXXXXXXXXXXXXXSSSVQGPLDALRAGAGGGKESAFFQDSGAVPTKLEQEEQLVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVMGGSRRAKADLVSHVRKQLDGDAVRDARKTGGXXXXXXXRHATSAGDEDSSGDGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHTQLKWKQLKNYEVAHMECRVGPGGGAPLLCAKPQEERV---------------------------------GHPAMFLSVGDVHIVQLQQALEQAGVNVKFLARTLRCEGGVTV--RMEGTRLELEGPLCDAYFRVRQVVYQQYTVV 3001
+ PL G DET P C I +V LLDCGWD F+ ++ + +D VL+S+PD HLGALPYA GKLG+ ++AT+PV+KMGQM +YD Y SR + E F F LDDVD+AF + LKY+Q ++ +G G+TITP AG MIG +WR+ E+ DIVYA YNHK ERHL L T++RPS+LITDA N+ R+ R+ +L++ ++ T+R GGNVL+ DTAGRVLEL ++D+ W+ G+ Y L LL+N +YN EFAKSQ+EWMS+ I R+F+ R+NPF+ +++ + HSL EL + DPKVVLAS L+ GFS+ L L+W S N+++LT R T AR L+ ++ TI +++ RV L EL + F K +K + MF +++ +I D+YG + +P +L E EEA + D VPTK + +Q++++ C V F+D EG SDG SI+ + ++ P+ L+V+ GS A L S+ + G + + E + +S + V L D L + L++ + K+ E+A ++ + L+ KPQ E H +F V ++ + +Q L +AG++ +F A L C G+ R E R+ LEG LC+ YFR+R+++Y+QY +V
Sbjct: 5 IKLQPLSGVFDET-----PHCYICQVDEFRFLLDCGWDEKFNPHFMKEFKKHIHTIDAVLLSYPDYYHLGALPYAVGKLGLTCPIFATIPVYKMGQMFMYDLYQSRHNSEEFDLFTLDDVDAAFDKIIQLKYNQSVSLKGKGHGLTITPLMAGHMIGGTIWRIVKDGEE-DIVYAVDYNHKKERHLNGCVLETISRPSLLITDAFNTNYNQSRRRQRDEQLMTNILQTLRNGGNVLVAVDTAGRVLELAHMVDQLWRNQDSGLLAYSLALLNNVSYNVVEFAKSQVEWMSDKIMRSFEGARSNPFQFKHLQLCHSLAELSRVP-DPKVVLASSPDLECGFSRDLFLQWCSNPKNSVILTTRTCPGTLARYLI------------------------------------------DNPATRTISLEIRKRVRLESTELEEYLRRGKEKEETTKKGDKNEVIDSSEESDDEMDVENQPVGKAKHDLMMKNEGKSRGG-----FFKQAKKSYPMFPFHEEKIRWDDYG-EIIKPEDFLIMEFNPAEEETKDKTEEA------------------------------------------------------NEEIADISEVPTKCIRSQQMIDINCSVQFIDFEGRSDGESIRKIISSIKPRRLVVVRGSPDATMSLASYCGSAVQGK-----------------------------------IFTPQLHECIDATTESHIYQVRLKDFLVSSLEFSRAKDAELAWVDGEIRIDEDETLVDIKPQNENSTPMEETDDDELKKDRRTNERIPTLEPLPINDISDHSTVF--VNELKLSDFKQVLIRAGIHAEFSAGVLYCNNGLVAVRRNEAGRINLEGCLCEDYFRIRELLYEQYAIV 752 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18763.1 >prot_F-serratus_M_contig75.18763.1 ID=prot_F-serratus_M_contig75.18763.1|Name=mRNA_F-serratus_M_contig75.18763.1|organism=Fucus serratus male|type=polypeptide|length=985bp MAQSPTPADLVRKLSDRISTYVKGSGKVPLKLLRWALGELEECARNQSLPback to top mRNA from alignment at F-serratus_M_contig75:586037..606368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18763.1 ID=mRNA_F-serratus_M_contig75.18763.1|Name=mRNA_F-serratus_M_contig75.18763.1|organism=Fucus serratus male|type=mRNA|length=20332bp|location=Sequence derived from alignment at F-serratus_M_contig75:586037..606368+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:586037..606368+ >mRNA_F-serratus_M_contig75.18763.1 ID=mRNA_F-serratus_M_contig75.18763.1|Name=mRNA_F-serratus_M_contig75.18763.1|organism=Fucus serratus male|type=CDS|length=5910bp|location=Sequence derived from alignment at F-serratus_M_contig75:586037..606368+ (Fucus serratus male)back to top |