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Homology
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: D7FQ94_ECTSI (Small nucleolar ribonucleoprotein U3 component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ94_ECTSI) HSP 1 Score: 329 bits (844), Expect = 1.010e-108 Identity = 164/184 (89.13%), Postives = 176/184 (95.65%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG 552
MRKLKYHEQKLLKKVDFLQWKSD+NIREIQ+LRRYL+QNRDDY KYNKIVGLITK+TA+LKTLDASDEFRIKMT QLL+KLF+MGIIN KKSLAKTE +VS+FCRRRLPVVMVRLKMSETLTEA T+IEQGHVRVGPHAVTDPA+LVTRSMEDFVTWVD SKIKRAIK YEDK+DDFDLLGEG
Sbjct: 1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKTLDASDEFRIKMTEQLLEKLFAMGIINTKKSLAKTETASVSSFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 184
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A836CN51_9STRA (Small nucleolar ribonucleoprotein U3 component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN51_9STRA) HSP 1 Score: 283 bits (725), Expect = 8.900e-91 Identity = 140/184 (76.09%), Postives = 161/184 (87.50%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG 552
MRKLKYHEQKLLKKVDFLQWKSD+NIREI++LRRY IQ+R+DY KYN++VG +T + AKLKTL ++D FR+KMT QLL KL S+G+I+ +KSL K E +TVSAFCRRRLPVVMVR KMSETL EA TFIE GH+RVGP+ VTDPA+LVTR+MEDFVTWVDSSKIKR I Y DKLDDFDLLGEG
Sbjct: 1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIKVLRRYHIQDREDYVKYNRLVGHVTSLAAKLKTLSSTDPFRVKMTSQLLSKLQSIGVIDTEKSLIKAEQLTVSAFCRRRLPVVMVRAKMSETLREAITFIESGHIRVGPNVVTDPAFLVTRTMEDFVTWVDSSKIKRTIAKYNDKLDDFDLLGEG 184
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A6S9JYI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JYI8_HETAK) HSP 1 Score: 279 bits (713), Expect = 5.500e-89 Identity = 137/182 (75.27%), Postives = 159/182 (87.36%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 546
MRKLK+HEQKLLKKVDFLQWKSD+NIREI+I+RRYL+Q+R+DYTKYNKI G + K+ AKL+ L +D+FRIKMT LL+KLF+MG+IN+KKSL E + VSAFCRRRLPVVMVRLKMSET+ EA TFIE GHVRVGPH VTDPA+LV R+MEDF+TWVDSSKIKR I Y DKLDD+DLLG
Sbjct: 1 MRKLKHHEQKLLKKVDFLQWKSDQNIREIKIIRRYLLQDREDYTKYNKICGHMWKLVAKLRALPPTDQFRIKMTEDLLEKLFNMGVINSKKSLQLVEKVNVSAFCRRRLPVVMVRLKMSETIKEAITFIEHGHVRVGPHCVTDPAFLVPRAMEDFLTWVDSSKIKRTIMKYNDKLDDYDLLG 182
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: W7TBD6_9STRA (Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBD6_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.980e-86 Identity = 137/182 (75.27%), Postives = 156/182 (85.71%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 546
MR+L++HEQKLLKKVDFLQWKSD+NIREI+ILRRY IQ+R+DY KYNKI G ITK+TAKLK L DEFRIKMT LL KL++MG+I KKSL++ E + SAFCRRRLPVVMVR+KM+ETL EA TFIEQGHVRVGP VTDP +LVTRS EDF+TWVDSSKIKRA+ Y DKLDDFDLLG
Sbjct: 1 MRQLRHHEQKLLKKVDFLQWKSDQNIREIKILRRYHIQDREDYVKYNKICGHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLAASAFCRRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTVVTDPTFLVTRSQEDFLTWVDSSKIKRAVVAYNDKLDDFDLLG 182
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: D8UBE0_VOLCA (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=D8UBE0_VOLCA) HSP 1 Score: 261 bits (668), Expect = 3.070e-82 Identity = 128/181 (70.72%), Postives = 154/181 (85.08%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 543
MR+LKYHEQKLLKKVDFL+WKSD N+RE+Q+LRRY IQ+RDDY KYNKI G+ITK+T+ LK LD D RI++T QLL+KL++MG++ KKSL + + + +AFCRRRL VVMVRLKMSETL EAATFIEQGHVRVGP VTDPA+ VTR+MEDFVTWVD+SK+KR + Y DKLDD+DLL
Sbjct: 1 MRQLKYHEQKLLKKVDFLRWKSDDNVRELQVLRRYHIQDRDDYKKYNKICGMITKLTSMLKRLDPKDATRIELTDQLLEKLYNMGVLPTKKSLVQCDKLATAAFCRRRLAVVMVRLKMSETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: E1ZQC4_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQC4_CHLVA) HSP 1 Score: 259 bits (663), Expect = 1.790e-81 Identity = 125/181 (69.06%), Postives = 153/181 (84.53%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 543
MRKLK+HE KLL+KVDFLQWK++ N RE+Q++RRY IQ+RDDY+KYNK+ G++TK+ A LK LDA D RI++T QLLDKL +MG+I KKSL + E ++ ++FCRRRL V+MVRLKMSETL EA TFIEQGHVRVGP VTDPA+LVTRSMEDFVTWVD+SKIKR + Y DKLDDFD++
Sbjct: 1 MRKLKHHEHKLLRKVDFLQWKNEHNQRELQVMRRYHIQDRDDYSKYNKVCGMVTKLVATLKRLDARDSTRIELTDQLLDKLHNMGVITTKKSLVQLEKLSTASFCRRRLSVIMVRLKMSETLREACTFIEQGHVRVGPDTVTDPAFLVTRSMEDFVTWVDTSKIKRKVLRYNDKLDDFDIM 181
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: L1JBM1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBM1_GUITC) HSP 1 Score: 259 bits (661), Expect = 3.570e-81 Identity = 125/181 (69.06%), Postives = 149/181 (82.32%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 543
MR+LKYHE+KLLKKV+F QWKSD+N+REIQILRRY +QNRDDY KYNKI GLITK+T+KLK L D R+K T L+DKL++MG+I+ KKSL + E I SAFCRRRLPVV+VRLK E L EA TF+EQGH+R+GP VTDPA+ VTRSMEDF+TWVDSSKI+R + Y D +DDFDLL
Sbjct: 1 MRQLKYHEEKLLKKVNFFQWKSDKNVREIQILRRYRVQNRDDYHKYNKIAGLITKLTSKLKELRQDDPTRVKTTELLIDKLYNMGLISTKKSLLQCEKIPTSAFCRRRLPVVLVRLKFCENLKEAVTFVEQGHIRIGPEVVTDPAFHVTRSMEDFITWVDSSKIRRKVMKYNDAVDDFDLL 181
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A7S1X290_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X290_9CHLO) HSP 1 Score: 258 bits (660), Expect = 4.870e-81 Identity = 125/181 (69.06%), Postives = 155/181 (85.64%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 543
MR+LK+HEQKLLKKV+FLQWKS+ N+RE+Q++RRY IQNRDDY YNKI G +TK+TA L+ LD+ D RI++T +LLDKL++MG+++ KKSL + E I+ ++FCRRRL VVMVRLKMSETL EA TFIEQGHVRVGP+ VTDPA+LVTR+ EDFVTWVD+SKIKR + Y DKLDD+DLL
Sbjct: 1 MRQLKHHEQKLLKKVNFLQWKSEHNMREVQVMRRYHIQNRDDYKSYNKICGHVTKLTAVLRKLDSRDPVRIELTDKLLDKLYNMGVLSTKKSLLQVEKISTASFCRRRLAVVMVRLKMSETLKEAVTFIEQGHVRVGPNTVTDPAFLVTRNFEDFVTWVDTSKIKRKVMKYNDKLDDYDLL 181
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A8IEP3_CHLRE (Small nucleolar ribonucleoprotein U3 component n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A8IEP3_CHLRE) HSP 1 Score: 256 bits (655), Expect = 2.740e-80 Identity = 125/181 (69.06%), Postives = 154/181 (85.08%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 543
MR+LK+HEQKLLKKVDFL+WKSD N+RE+Q++RRY IQ+RDDY KYNKI G++TK+T+ LK LDA D R+++T QLL+KL +MGII KKSL + + + ++FCRRRL VVMVRLKM+ETL EAATFIEQGHVRVGP VTDPA+ VTR+MEDFVTWVD+SK+KR + Y DKLDD+DLL
Sbjct: 1 MRQLKHHEQKLLKKVDFLRWKSDDNVRELQVMRRYHIQDRDDYKKYNKISGMVTKLTSMLKQLDAKDPARVELTDQLLEKLHAMGIIPTKKSLVQCDKLPTASFCRRRLAVVMVRLKMAETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A7S3HSU8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSU8_9STRA) HSP 1 Score: 256 bits (654), Expect = 4.140e-80 Identity = 125/182 (68.68%), Postives = 150/182 (82.42%), Query Frame = 1
Query: 1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 546
MR+LK+HE+KLLKKVDF WK D+ IRE I+R+YL+Q R+DY KYNKIVG +TK+ AKLKT+ A D R +++ Q+L KL++MGI+N SL+ E +TVSAFCRRRLPVVMVRLKMSE L EA TFIEQGHVRVGP+ +TDPA+LVTR+ ED+VTWVDSSKIKR I Y DKLDDFDLLG
Sbjct: 2 MRELKHHEKKLLKKVDFFSWKDDQTIREATIIRKYLLQEREDYMKYNKIVGGVTKLCAKLKTMPAEDPVRYQLSTQILQKLYNMGIVNKTSSLSAIEKLTVSAFCRRRLPVVMVRLKMSENLKEATTFIEQGHVRVGPNVITDPAFLVTRTFEDYVTWVDSSKIKRTIMKYNDKLDDFDLLG 183
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 330.9 |
| Seed ortholog evalue | 3.9e-88 |
| Seed eggNOG ortholog | 2880.D7FQ94 |
| Preferred name | IMP3 |
| KEGG ko | ko:K14560 |
| KEGG Pathway | ko03008,map03008 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030515,GO:0030532,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034457,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0120114,GO:1901360,GO:1901363,GO:1990904 |
| EggNOG free text desc. | snoRNA binding |
| EggNOG OGs | COG0522@1,KOG4655@2759 |
| Ec32 ortholog description | Ribosomal protein S4/S9, N-terminal |
| Ec32 ortholog | Ec-01_006990.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03009 |
| Exons | 6 |
| Model size | 1481 |
| Cds size | 555 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932262.2733524-UTR-F-serratus_M_contig75:371351..371577 | 1622932262.2733524-UTR-F-serratus_M_contig75:371351..371577 | Fucus serratus male | UTR | F-serratus_M_contig75 371352..371577 - |
| 1690964224.1390436-UTR-F-serratus_M_contig75:371351..371577 | 1690964224.1390436-UTR-F-serratus_M_contig75:371351..371577 | Fucus serratus male | UTR | F-serratus_M_contig75 371352..371577 - |
| 1622932262.2910292-UTR-F-serratus_M_contig75:376400..377100 | 1622932262.2910292-UTR-F-serratus_M_contig75:376400..377100 | Fucus serratus male | UTR | F-serratus_M_contig75 376401..377100 - |
| 1690964224.1541677-UTR-F-serratus_M_contig75:376400..377100 | 1690964224.1541677-UTR-F-serratus_M_contig75:376400..377100 | Fucus serratus male | UTR | F-serratus_M_contig75 376401..377100 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932262.3099244-CDS-F-serratus_M_contig75:377100..377220 | 1622932262.3099244-CDS-F-serratus_M_contig75:377100..377220 | Fucus serratus male | CDS | F-serratus_M_contig75 377101..377220 - |
| 1690964224.1694033-CDS-F-serratus_M_contig75:377100..377220 | 1690964224.1694033-CDS-F-serratus_M_contig75:377100..377220 | Fucus serratus male | CDS | F-serratus_M_contig75 377101..377220 - |
| 1622932262.3322828-CDS-F-serratus_M_contig75:377474..377592 | 1622932262.3322828-CDS-F-serratus_M_contig75:377474..377592 | Fucus serratus male | CDS | F-serratus_M_contig75 377475..377592 - |
| 1690964224.1788104-CDS-F-serratus_M_contig75:377474..377592 | 1690964224.1788104-CDS-F-serratus_M_contig75:377474..377592 | Fucus serratus male | CDS | F-serratus_M_contig75 377475..377592 - |
| 1622932262.346313-CDS-F-serratus_M_contig75:378100..378234 | 1622932262.346313-CDS-F-serratus_M_contig75:378100..378234 | Fucus serratus male | CDS | F-serratus_M_contig75 378101..378234 - |
| 1690964224.188027-CDS-F-serratus_M_contig75:378100..378234 | 1690964224.188027-CDS-F-serratus_M_contig75:378100..378234 | Fucus serratus male | CDS | F-serratus_M_contig75 378101..378234 - |
| 1622932262.3582442-CDS-F-serratus_M_contig75:378748..378841 | 1622932262.3582442-CDS-F-serratus_M_contig75:378748..378841 | Fucus serratus male | CDS | F-serratus_M_contig75 378749..378841 - |
| 1690964224.197219-CDS-F-serratus_M_contig75:378748..378841 | 1690964224.197219-CDS-F-serratus_M_contig75:378748..378841 | Fucus serratus male | CDS | F-serratus_M_contig75 378749..378841 - |
| 1622932262.3744144-CDS-F-serratus_M_contig75:381169..381259 | 1622932262.3744144-CDS-F-serratus_M_contig75:381169..381259 | Fucus serratus male | CDS | F-serratus_M_contig75 381170..381259 - |
| 1690964224.2146819-CDS-F-serratus_M_contig75:381169..381259 | 1690964224.2146819-CDS-F-serratus_M_contig75:381169..381259 | Fucus serratus male | CDS | F-serratus_M_contig75 381170..381259 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18754.1 >prot_F-serratus_M_contig75.18754.1 ID=prot_F-serratus_M_contig75.18754.1|Name=mRNA_F-serratus_M_contig75.18754.1|organism=Fucus serratus male|type=polypeptide|length=185bp
MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIV GLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAIT VSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTR SMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG* back to topmRNA from alignment at F-serratus_M_contig75:371352..381259- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig75.18754.1 ID=mRNA_F-serratus_M_contig75.18754.1|Name=mRNA_F-serratus_M_contig75.18754.1|organism=Fucus serratus male|type=mRNA|length=9908bp|location=Sequence derived from alignment at F-serratus_M_contig75:371352..381259- (Fucus serratus male) ATGAGGAAGCTAAAGTACCACGAGCAGAAGCTTTTGAAGAAGGTTGACTT
CTTACAATGGAAAAGTGACCGAAACATCAGGGAAATACAGGTGAACCATT
TGTTATTTTTTCGAAAACATGACCTATGGACAGCAAGTCTCGTTGTCGTC
GCATTCCGGCTCGATGTGGAGTGCGTTCTGTACCAGTACAGCACATACCC
AATGAAGTTGTGTAGTGTAGTTACGATACGGATGACGAAGCTCCATGAAC
TCAGTCGTAAACCCCGTGACGATATATTTTGAGTCCAGAGGATACTCATG
GGTACAGTGCAGTGGTGGAGAAAGTTATCTGAGCTCGGTTCGAAGCACCC
AGGCAGTGGAATCAGGAAAAATAAATGTCGAGGCAAATAAGGACAGTACT
TTTATTTTATTTTATTTTTATCACACTTATAGCCGATGGACCTCTAATTA
CCATCCTGCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACG
CCTTGCAATTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAA
CCAATGGTTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTTACGAAA
GAAAGAACCCAAATTCTGCTTAAGCTAAGAATCGAACTCACGACTTCCGC
ACTAGCAGGTATGCAGGTTACCTACTAGACCACTCGGGCAACCTGTCTTT
GCTAATCCCGGGACACAAAGATAAAGGTGGTATCTGCACTGACCGCAGCA
GTATCATGTTTCTGTATCTAAAGCACTGTTCTCAGTACGAGTACGGTGTA
AAAGCCTGCACAGACACCAGTGCTACGGTAACAGCCGATGTTCCATACTA
AGCATTTCGACACAACCCCCCCTGACGGTGTGGATTGCAATTACTGATTA
TAGAGGGAGGTTGAAGGTGTTCGTTAAGCTAAGAATCGAACTCACGACTT
CCGCACTAGCAGGTATGCAGGTTACCTACTAGACCACTCGGGCAACCTGT
CTTTGCTAATCCCGGGACACAAAGATAAAGGTGGTATCTGCACTGACCGC
AGCAGTATCATGTTTCTGTATCTAAAGCACTGTTCTCAGTACGAGTACGG
TGTAAGAGCCTGCACAGACACCAGTGCTACGGTAACAGCCGATGTTCCAT
ACTAAGCATTTCGACACAACCCCCCTGACGGTGTGGATTGCAATTACTGA
TTATAGAGGAGGTTGAAGGTGTTCGTTAAGCTAAGAATCGAACTCACGAC
TTCCGCACTAGCAGGTATGCAGGTTACCTACTAGACCACTCGGGCAACCT
GTCTTTGCTAATCCCGGGACACAAAGATAAAGGTGGTATCTGCACTGACC
GCAGCAGTATCATGTTTCTGTATCTAAAGCACTGTTCTCAGTACGAGTAC
GGTGTAAGAGCCTGCACAGACACCAGTGCTACGGTAACAGCCGATGTTCC
ATACTAAGCATTTCGACACAACCCCCCCTGACGGTGTGGATTGCAATTAC
TGATTATAGAGGGAGGTTGAAGGTGTTCGTTAAAGGCCAAACCATTAGAC
TACTGAGTCACTGAGTGAATAGTCTAATGGCTTGGCCCTTCTTACAATGA
TCTCCGGGGACTGCAGCGTTATCTCAATCTTTACCACACAACTTACTTTT
CCCCTGTGACTCAGTAGTCCAATGGTTTGGGTGACAAGTATCAAAAGTAA
GTCGCGGGTTCAATCCCCGGTAGCGACAAAAAGAGCAAAAAAAGCAAAAA
GTTAGTTGTTTCAAACATTGAGATATAATGTACTGCAGTGCGTGGCGATG
GGAGACTCAGTATTATAGTCTAATAATTTGGCCGATAACTAACAGAAGCT
ATAGGCGGGCATGCCTTCAGATTTTTCAATAAACGAAACAAGCGCTTCAT
AAGCACCACAGCGTTTTTTGTCCTCATATGATAGGTTTACCACCCCGTGT
CTAAGCGCACGAATCAGGTCCGATCAATTCATTTAGAAGGTCAAAATTCA
ATCGTTCAAACTCGTTACAATATATTATTCGTATACAACAAGGTTGAAGC
GAAAGACGCTACAAGTACTTTTGTAGTCTTTTTTTTGCCAGTACGTTTCG
TAGTGTTAGGTCTAATAATTGACGAAGTACGGTAGTGTACTGTTGTAGTA
CAGCTATCATAGTAGCATGGGTGGTTTATTCATTTGAATCCGAACACAAT
CCTACCGCGAACCGCTTAGTGGAGAGGAAGCCTATTGTGTACTATTACTA
GACTATGGGGTGAACGTTAAATTGCGATATATATTGATAACATACTTAAT
TGGGTTGAGAGGGCGCATATTGTGGCGACGAGTTACCACGTGCTCACACG
TGCCCATACATGCGCATCACTCGATCACCGGAGCCCCTCCCCCGTATTAA
TGCTGTAACTCTTGTCAGATTCTCCGCAGGTACCTGATACAGAACCGAGA
CGACTACACCAAGTATAACAAGATAGTAGGGCTCATCACAAAGATAACGG
CGAAACTCAAGGTATTCGGATAGTCTATGTTGGATATTTTGGGCGCCTGT
GAGCAAAAAGTCCCCCGTTCGCCCTTGGTCGCACTGCACACCTTTTGTTT
TTCAACCATTATATTAATATTAATACGGGTACACGTAAAACGAGAGCACG
GCGCTTGACCTCCTGTTTAGTTGATACAAACAAATGTGATGTAGTACACA
GCATACTGATACCCCGTAGATAGCGTAGATAGCGTAGATAGCGCGGGTGG
AGTACGAGGAGCACTGCCCTGAACTCACCCTGCCGAAAGGCCCTGGATTT
AGCGAAAGGCGGACAGAAGACTTGTTCTAGCTTTCTTTTATGCTGACACT
ATAATATTAATATTACTAGGAATATTTTTAGTGTTTCGCTATGCTATGGT
ATTAATAGCAGCAGCTGTTAGGGTGGGAGGTTCTCGGGTCCTTTAGATGG
AGGAGTTTGCTAATAGATACCCCCCCCCCATCCATATAACCGTGCGACCA
CTGGCTTTTGACACTTTGACGTTAGACGTTAGACGCCAGCGACGAGTTCC
GGATAAAGATGACAAGGCAGCTGCTTGACAAGCTCTTCTCGATGGGGATA
ATTAACGCGAAGAAGAGTCTGGCCAAGACAGAGGCTATCACCGTGTCCGC
CTTCTGCAGGTATTATTAATAGTAGTGTAGGTGTCGCTTACATATTGGGC
ACATGGGTCGCTGAGGTCAGACGTCGTTGCACGTGGTAGTCGATACGTTA
ATAGATTTGATAGATTTGGTGTGGGTAGATTTACCAAGGAACAAAATAAC
TGACTTGAAAATGCGCTACGCGTAAATGTGGAACCCGCCGGAAGTACCGA
CACGACAGCAACTGAGGATATAAAGTGAAAGCGTTGGCACGAAAATCGAC
CGCAGGCTTGAATGTCGGACTGCCGTCTATATCAAGCGGAGTGATTACTT
GATGTGGTGGAGTCGATTTAATTGTAGCTGGTTCGTGAAGCTGCGCCTTC
TGAAACATTCGACATTCCCTAAACATTTGGCGTCTCCCGGTCCGTCCTTC
TATTGTAAAATACTTGATCGCATTGCCTCCCAATGCATCCTCCTATTAGT
ATAGTACATTTGTAGGAACTAACCCTATTGTCTGTGCCTGGTACGTGAAC
TTTGATGCTGTGCACAGGCGACGATTACCAGTGGTGATGGTGAGACTGAA
AATGTCCGAAACGCTAACGGAGGCCGCGACGTTCATAGAGCAAGGGCATG
TGAGGGTTGGTCCTCACGCCGTCACCGATCCGGCGGTAAGTGCAGCGCAA
GGAAAGGGCGTGAAGGGATTCATTGGCTTCTACGGCAGAAGAGATTCCAG
AAATGTGGAAACGGGTGACGATCTCGGACACCCACAAGTATCGTGTCCAC
GTACGACGGTGCAACCCTTGCGAATGCTGGTTGCTGTTTGGCTAAGCAGG
CCTAAACAATGCTCAACCGTAAGAAATGTAGAGCTCGTCTGAATCACGTA
CCACCGACTCGTCGTCGCTGCCCCCAAATCTTTGCACAGTACCTGGTCAC
TCGTAGTATGGAAGATTTCGTCACATGGGTGGACAGCTCAAAGATCAAGC
GGGCCATCAAGAACTACGAGGACAAGCTAGACGACTTCGACCTACTGGGT
GAAGGATAGATTAGAGGATCGTATACTGTTAATTGTAACATTTGTTATGG
TAAGCGATCGTGAAGGGCCAAGGTATGCAATTTCAAAAGCTTGTGTAACG
TTAATCTGTGTTCTGAATTTTTTCCAGCGGGGGGGGCTCTTGTACGATGG
TAGGACTTCGGTCATCGTACCTGTTTTTCAAGTTTATCCAGCACAAAATG
GAATAATCAAGGCGTATGAAGAAAGTAAGACGAAACCAAGCTAGATTCCA
GATTCCTCTTTAATCGTTTGGTGTTGTGTGTTCACCCCTTGTTGATGACG
TAGACGCTTAGGCACTTGAGCTGCTGCCTGACATTATCATTCCCTACTGC
TGACCGGCTTTTTTCGACGGTGCAACTGTTTTCTAAGGCTCACAATGGTC
GTTTGTGCGGGACCATGTTTTGGTATTGCGGGCTAAGCTCCCGCCAGTTA
TTCCGCCCGCGTGCTGTCCTCAAAGTGTCCTCAAGGATACATTGTATGTA
TGGTCACACATATAGCAAGAGTACGGATCAACCGAGTAAGGCTACCAATC
CTGCTCGTGGTCAGCTGAACAGGAAAACTTAATGTGTTCCTGTCCGCGTT
CGTGCCTGAGAAGTAGGTCTCGCGAGACGGGTTCGACAGTCCCGTCCTGT
GTCAACCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTCACTGTTCG
TCCGTCAGTGTATTGTTTACATCCTTAACGTATATAAGAACTATTCTCGT
ATTTGGGAACTGTTGTCAAATACTTGCAGGCAACAGAAGTAGCTTTATAT
AGGATAACCTCGGACTATCCGATTACAGCGACCGACGAACGCTACTGTAG
CTGTAATGTGGTTCGATAAATGTTCTGAGATTGTTCTGACTTGCCCAGTA
ACGGTATTAGGGTATCGGCCCTTTGGCGAACGGCTCTTTTCTTGCTCGAC
GACCTTGGGCCGAACCCCCAGTCGATCACTCGTGTTCGTGTCCCCTTTTT
GCTTCAAGCTGTTAATTAATAAACCAACTTCTTCGATCTATCCTACCAGT
GCCACATTTCCCATCCTTGGACAAGTCGCCTCAGCTTTGAGGTCTTGCAC
AAAATCCAAATCCTGAACACTTTAGAGCTTTCAGAGTTTCTAGGACTAAC
CGGTTAGTTTCCCAAGGTTCCGGACGAAGGACATCAGATATCATGGAAGC
CTCTGCGAACGTCATAAGCCGCGAGGAATCTACCACAGCAATTGAAGACA
TCAGCGCGAAGATGAGACGCTGATAACGGCCATGTCCCAATTAGTGCAAG
GGGCTGCGTCCACGACGACGGGTGACGAGCGAGAGTCAAAAGACGGGAGG
TACAACGCTCCAGGTGCTGATCAATCATTTTCCTTGATCAGCACCTGGAG
CGGTGTGCCTCCGCCTCTTGACTCTCGTTGGTCGCCCGTCGTCGTGGGCG
CAGCCCCTTGCACTAACTGGGACATGGTCATCATCAGCGCCTCCATCTTC
GCGCTGATGTTTTCAATTGCTGTGGTGAATTCCTCGCGGCTAACGACGTT
CGCAGAGACCTCCATGATATCTGATATCCTTTGTCCGAAACCTTGGTGAA
CTAACCAGTTAGTCCTAGAAACTCTGAAAGCTTTAGAGTGTTCAGGATTT
GGATTTTGTGCAAGACCTCCAAGTTGAGGCGACTTGTCTAAGGCCAACCT
TTATGGGAGACAGAAACGACAGTGAAACACAGAAAAGTAAAAATTATGTG
GCGAATTTTTGTAAACGTCGCACTATGGGCCCCGAAACGCAGAAATTGCG
AATTTCTGTGGGAGGCTATTTTCCTCTGGCCATCTACAGAAATTAGGCAA
AATTTTGTAGGTGGCTCGACAACAAGTTTATTTCGCCACAGAAATGATTC
ACGCCTTCCAAGAACGATTGGGAGGTCGGGACTGTAGCATCCCTCCTATC
AAATATCGGCAAAGAGCTTGCGAGTGCTGTTGTACGATGGGTGCCGAGCA
TCAGTAGTTGTGCGATGGTCGCCGGAGCAGCAGATTGAGGAAATTTATAG
AAGCTGTTGAGGTGAAGGGCCCAGGTAAGCAGATTTGGAGGAGAGTTATA
AAAGCTGTTGAGGTGATGGGCCCGGACAAGCTGATCGCCGGCGGCGGGAG
AGGTTGAATGGATGGCGCCGGAGATCAAGTAGGGATGGACTGCGTGTACG
AGCGTCCGACGGCTCGCCATCGAAACGATGTCGCTCTGCCCACTCTATTT
GCGATGTACTCGCAATTAAGTACTAAACGACCCTGTCTCGCCAGACCAAA
TTCTCAGGCGCAAACAAGAAGAGGGAAGTATTAATTTTCCCTGTTTAGTT
GACCACGAGCAGGACAGGCAACCTTACTCGGTTGATCCATACTCTGCTAT
GTGTACATACTTGCACCTGTCTTTGTGTGGTAATGGGTGGCCGGAAATGC
CGGGGTTAACCCGATATGCTTCCCGTTCTTTTCTGTATTTTTCCTTTATC
CCATAAACGACCAACTACAGTTTTTCCCCACGTTTTTTTTGGCCACAAAA
TTTACAAATTTCTGCAGTTTGTTTTTCCGTTTCCCATAAAGGTTGGCCTA
AGGATGGGAAATGTGGCACTGGTAGGATAGATGGAAGAAGTTGGTTTATT
AATTAACAGCTTGAAGCAAAAAGGGGACATGAACAAGAGTGATCGACGAC
CTCGATCACTCTTGTTCGTATCCCCTTTTTGCTTCAAGCTGTTAATAAGA
TCCTAAACACTCAAGCTTTCAGAGTTTTTAAGACTTCCATTTCTACAAAG
GATATCCTACCAGTGGAGTCTTAACCTACATTTCCCCATCCTTGGACAAT
CCTATTTTGTCGCCTCAGCTTTGAGGTCTTGCACAAAATCCAGATCCTAA
ACACTCTAGAGCTTTCAGAGTTTTTAAGACTAACCGGTTAGTGCACCAAG
GTTTCGGACAAAGGATATCAGATATCATGGAGGTCTCTGCGAAAGCCGTT
AGTCGCGAGAAATTCACCACAGCAATTGAAAACATCAGCGCGAAGATGAA
GGCGCTGATGACGACCATGTCCCAGTTAGTGCAAGGGACTGCGCCCACGA
CGACGGGCGACCAACGAGAGTCAACGGGCGGGAGGCACACCGCTCCAGGT
GCTGATCAAGGAAGGATTGATCACGCACCGAACACCGGAGGAGCACCAGA
CTGGCAACAACACAGATCCGGATCATCCGTGGGGGATGCCTCGCGTGAAA
ACGCCCATGGTGAGCAGACGGCCCACCATGTGAACCCCCTCAATAGCCGA
ACCCCCCGCCTTAGGCAGTTGAACTTTGATGGTAGGGAGAACTGGCCAAT
GTTCCAAAATGACTTCCTCACCCAAGTCCATGCGTGTGGTATGATGAGTT
GCCTGAAAGATCCTAGGGACATTTACGTACATGGCATGGCTGACGAGGAA
ATTTTGGAGCAGGGATTACAGACGCATGAGATAGGGAGGTACAAGGACTT
GTGGGTTATGCTCGTAGGAGCTATCACCGACTTCACTACAAAAATGCTTG
TGTTTTCCCACAGGGGACCAGCGGAAGCGTGGCGTGCATTAGAAATACTT
TTTCCCCCCTTGACTGGTGGTGAACAAACTTCCCTGACTGGAAAGTTCTT
TAACGCAAAACAGAAAACGGGACAGGACCCTCACGCGTTTTTCCATCAGT
TCAACTCGACTGTGACCACCCTAGAGCTGGCCTTTGATCAACCGTACATG
CACGCTTTCTCGACGCCCTATTGCCTGAGTACGAGATTCAAAAGTAGCAG
CTCTCGAGCCAAAAGTCGCTGGAAACAGAGGAAATTATGAGAGTTTTAAG
GACTAGAGCGGGGCATTTAAGAGTAGGAGTAGAGGGAAGGGAAAAGGGGG
GGGGGCGGAGCACGCGTTCGCTGCTGTGGGCGAGAAAGGAGAGGTGAAGC
AGAGGAGGCGCAAAAAAAAGCCTCAAAGGGATGACCCCGACACTGCCCTC
GTAGCCGGTTCTGAAGCCAAGTGCCATGTCTGCGGAGACAAGAGCCACTT
CATCCAGCAATGTTCCAAGCAGATCTGCCAGAGTTGTGGGGTAAAGGGGC
ACCACATCAAAGAATGTGAGGCGGAGTTTGTTGGGGTTATGATAGAATGG
AGTGAAGAAGTAGAGCCTTCTGAATGAGATGTTGGAAGCGTGCTCGGTCT
CTCGTTTGATTCTGCCTTTCGGTGTATTTTCGTCTTGTAAGTTTTGGGTT
AAGATAACACATTAGTCCCTGCAATGCTGAGCCGGGATACAGTTGTGTAG
ACCTAGGTAGCTTCGCTTGTTTGGGCTCCTATCATCCGTCTCTTAATAGA
CGTAGGTAGATGCGGTGCCCCGCATCCTTTTCCCTATTTGAGACTTGCGA
TTGGTAAAGATTTGTTCAGTCTCCTTTCGCTTCGTTGCTCCGAGGCACCG
AGCTTCGGGGATTGAATTGACAAGGAAAACGTTGGTTTTTGTCCGGACTG
AATGTTTGCATGCAGTTCGTTGACAGGTATGATAAGGCCGAACCACAGAG
GAGGGTAGAAGCTCGGCCACGCATCCCCCCCTTAGTGTGTGACGACACAC
CAGTAATCTCGTTTTTTTGCAGATAACAATGGTGGAAGTTCCTCCGTCGA
GCTGTTGAGTGAACTAGCTACATGAAATGATATGCCATAGCCGTTGGTCG
ATTCAGCCACATGAATGTTCATCCAACATGATACGCATAGTCGTTGGTTG
GCTGAGTCACACGAAATGTTTATTCAATAAGCTCAGTTCATGTCATTGTT
AATCCGCTGTAGTGTGTTGACACTTGATAACGTTGATTCACTGCTTGGAT
CTTCTACTGTACAGGTTGAAGAGAGGCATCTCTTCCTTGCGAGGTAGAAT
CGATAACCCCTATTTTTGAAGTTTTTATTCCGTTGGGAAAAAACGATTAG
TACAACATGTAGGATTGCTGGTCACTTTCGAGTGCTAGCAGTAACGTTTG
CTGGTAGGGAGGGCTGCTTGTCAAGGAGCAGCCAAAATAAATTTTATGAC
CCGTACGAACGCTTTACTGGTTGGGGTTTAGTTGTTCACCCCACTACAGG
ATTGATCTGGTGGGCCCCGAGTCTTCTGATGAAGCACACGAAAAGAAGGA
CACTCTTTTCTTGTAAGTTGGAATCGACTATCCCTCTTAGATGTTCTTTT
TCGCTGGGAAATAACGTAAATGGTTTCGCGGGTCGTTGGTCAATCCTAGA
TGCTGACTTCAATTAAGCTAGTTGCAGGGAGAGGTGCTACCAGTAGGGAG
TAGCGAAATTTGTTATGCCCCGAACGAGCGCTTTACGTATTGAGGCATAG
CTGCTCGCAGCGCCAAGAAAAAAATGCCGATCCATCTGGCGCGAGGTACG
GAGGGTTTTGATCGAGTAGGTAGGTTATCCTTCGTCAGTTTCTGTGTGTG
TGTGTTTTTTTTGAGCGCCTATGATCTCCGATAGTTACATCCATAATGAC
GTAATCAATCAAGGAGGGTATTCGTGCGTCAGTGGATTGTTTACATCCTT
AACTTAGATAGGAAGTGTTGTCAAATACTTGCAGGCAACAGAAGTAGCTT
AATATAGGATAACCTCGGACTATCCGATTACAGCGACCGACGAACGCTAG
CTGTAATGTGGTTCGATAAATGTTCTGAGATTGTTCTGACCTGCCCAGTA
ACGGTATTAGGGTATCGACCTCTTTGGCGAACGGCTCTTTTCTTGCTCGA
CGACCTTG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig75:371352..381259- >mRNA_F-serratus_M_contig75.18754.1 ID=mRNA_F-serratus_M_contig75.18754.1|Name=mRNA_F-serratus_M_contig75.18754.1|organism=Fucus serratus male|type=CDS|length=1110bp|location=Sequence derived from alignment at F-serratus_M_contig75:371352..381259- (Fucus serratus male) ATGAGGAAGCTAAAGTACCACGAGCAGAAGCTTTTGAAGAAGGTTGACTT CTTACAATGGAAAAGTGACCGAAACATCAGGGAAATACAGATGAGGAAGC TAAAGTACCACGAGCAGAAGCTTTTGAAGAAGGTTGACTTCTTACAATGG AAAAGTGACCGAAACATCAGGGAAATACAGATTCTCCGCAGGTACCTGAT ACAGAACCGAGACGACTACACCAAGTATAACAAGATAGTAGGGCTCATCA CAAAGATAACGGCGAAACTCAAGATTCTCCGCAGGTACCTGATACAGAAC CGAGACGACTACACCAAGTATAACAAGATAGTAGGGCTCATCACAAAGAT AACGGCGAAACTCAAGACGTTAGACGCCAGCGACGAGTTCCGGATAAAGA TGACAAGGCAGCTGCTTGACAAGCTCTTCTCGATGGGGATAATTAACGCG AAGAAGAGTCTGGCCAAGACAGAGGCTATCACCGTGTCCGCCTTCTGCAG ACGTTAGACGCCAGCGACGAGTTCCGGATAAAGATGACAAGGCAGCTGCT TGACAAGCTCTTCTCGATGGGGATAATTAACGCGAAGAAGAGTCTGGCCA AGACAGAGGCTATCACCGTGTCCGCCTTCTGCAGGCGACGATTACCAGTG GTGATGGTGAGACTGAAAATGTCCGAAACGCTAACGGAGGCCGCGACGTT CATAGAGCAAGGGCATGTGAGGGTTGGTCCTCACGCCGTCACCGATCCGG CGGCGACGATTACCAGTGGTGATGGTGAGACTGAAAATGTCCGAAACGCT AACGGAGGCCGCGACGTTCATAGAGCAAGGGCATGTGAGGGTTGGTCCTC ACGCCGTCACCGATCCGGCGTACCTGGTCACTCGTAGTATGGAAGATTTC GTCACATGGGTGGACAGCTCAAAGATCAAGCGGGCCATCAAGAACTACGA GGACAAGCTAGACGACTTCGACCTACTGGGTGAAGGATAGTACCTGGTCA CTCGTAGTATGGAAGATTTCGTCACATGGGTGGACAGCTCAAAGATCAAG CGGGCCATCAAGAACTACGAGGACAAGCTAGACGACTTCGACCTACTGGG TGAAGGATAG back to top
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