mRNA_F-serratus_M_contig75.18744.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI) HSP 1 Score: 497 bits (1280), Expect = 5.970e-166 Identity = 262/425 (61.65%), Postives = 305/425 (71.76%), Query Frame = 1
Query: 118 SWHGDDIRIAMTILLIALGWIIFSLRSSSAYH--LAALIRDPNKTKSRLKRDGDRDATLDSVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTKERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLVDRRKQDALVLSALAEVPDQYRAIRTLGLIRGLADGPGSSGILKSVAAQAGAAIQGAFTS-----------APSYPVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKSTRVVPNHALRNSIDEWRRERGY 1353
SWH DD+R+A+ +LL+ALGWI LR A L AL + G+ S+ EL L+ AGV+ +GLIVGVDFTRSNEWTG+R YG SMH++ + PNPYQEVL +GRGL P+N + IWCYGFGDE+T DE+VFCF+ DQPC NL L RY+ IAPAV LSGPTSFAPLI KAIEIV+D+ +YHCLVIIADGQVTKERDTV+AIQ AS+YPLSIIM+GVGEGPW+TCR FD RLPGRR+DNFRFVEHR + +AL LSALAEVPDQYRAIR LG++ G A PGS G A+ AG + G+ S AP + + ++ VPQ F CPLTLEVMIDPVVCEDGHSYERGALEAW RNH TSPMSNA L S VPNHALRNSI+ +RRERGY
Sbjct: 28 SWHDDDMRVAVIVLLMALGWIYLKLRGKDANKGWLEAL---------GVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHDIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDT-REYHCLVIIADGQVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKYGDAEALALSALAEVPDQYRAIRALGIMEG-AGAPGS-GPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXPSELDEDEGVPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFRRERGY 440
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO) HSP 1 Score: 300 bits (769), Expect = 1.420e-89 Identity = 172/425 (40.47%), Postives = 239/425 (56.24%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLVD-------RRKQDALVLSALAEVPDQYRAIRTLGLIR-------------------------GLADGPGSSG-----------ILKSVAAQAGAAIQGAFTSAPSY----------------PVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKS-TRVVPNHALRNSIDEWRRERG 1350
+V E+ L + G+ SS LIV VDFT+SNEWTG+R +G KS+H + G P+PY++ + AIGR L + I CYGFGD +T D SVF FLPGD+PC L+ +L RY E+ P V+++GPTSFAP I +A IVE SG +YH L+++ADGQV++ E DT+ AI +AS PLSIIM+GVG+GPWD + FD LP R+FDNF+FV V R++ L AL E+P+QY+ I+ LGL+ + G GS G I + ++A A I G S D+R P+ + +F CP+T +VM DPV+ DG++YER A+ W +N SPM+NAP+ T ++PNHALR+SI +W+++ G
Sbjct: 51 NVEEVQDALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQASRIVEQSGYQYHILLLVADGQVSRSSDLLPGQHSDQEADTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANPVLDPPVPPSIMSGLGSGGSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPD--PMFLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDNG 472
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO) HSP 1 Score: 297 bits (761), Expect = 2.010e-88 Identity = 168/425 (39.53%), Postives = 237/425 (55.76%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLVDR-------RKQDALVLSALAEVPDQYRAIRTLGL----------------IRGLADGPGSSGILKSVAAQAGAA------------------------------------IQGAFTSAPSYPVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKS-TRVVPNHALRNSIDEWRRERG 1350
SV E+ L + G+ SS LIV VDFT+SNEWTG+R +G KS+H + G P+PY++ + AIGR L + I CYGFGD +T D SVF FLPGD+PC L+ +L RY E+ P V+++GPTSFAP I +A IVE SG +YH L+++ADGQV++ E+DT+ AI +AS PLSIIM+GVG+GPWD + FD LP R+FDNF+FV V R++ L AL E+P+QY+ I+ LGL I + D P I+ + + A + S + ++R P+ + +F CP+T +VM DPV+ DG++YER A+ W +N SPM+NAP+ T ++PNHALR+SI +W+++ G
Sbjct: 51 SVEEVQEALRKGGLESSNLIVSVDFTKSNEWTGKRSFGGKSLHTI-GDVPSPYEDAIGAIGRTLSAFDDDGLIPCYGFGDVTTGDRSVFSFLPGDKPCEGLEQVLWRYRELCPYVRMAGPTSFAPAIRQACRIVEQSGYQYHILLLVADGQVSRSSDLLPGQYSDQEQDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINPVLDPPVPPSIMNGLGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQPD--SMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWKQDHG 472
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO) HSP 1 Score: 279 bits (714), Expect = 3.980e-81 Identity = 175/445 (39.33%), Postives = 235/445 (52.81%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLV------DRRKQDAL-VLSALAEVPDQYRAIRTLG-------------------------------LIRGLADGP------GSSG-------------------ILKSVAAQAGAA----IQGAFTSAPSYPVD-NRDNPEDEVPQ-----------VFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKSTRV-VPNHALRNSIDEWRRERG 1350
S+ ++ +L + G+ SS LIV VDFT+SNEWTG+ +G +S+H + G PNPY+E + IGR L + I CYGFGD +T D SVF FL DQPCR L+ L RY E+ P ++++GPTSFAP I +A IVE SG +YH L+++ADGQV++ E+DT+ AI +ASS PLSIIM+GVG+GPWD + FD LP R FDNF+FV + DR +++AL L AL E+P+QY AI+ +G L+ G A GP G +G S A A AA Q A TS Y V P P +F CP+T +VM DPV+ DG++YER A+ W SP++N + V +PNH LR+SI EWR++ G
Sbjct: 66 SLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKGSFGGRSLHAI-GDQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQASRIVEASGGQYHILLLVADGQVSRPSGLPDNVKSEQEQDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPVPPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPMFVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWRQKHG 509
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A250WT19_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT19_9CHLO) HSP 1 Score: 267 bits (683), Expect = 1.900e-77 Identity = 164/414 (39.61%), Postives = 230/414 (55.56%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVE-------HRLVDRRKQDALVLSALAEVPDQYRAIRTLGL-------IRGLA--DGPG-----SSGILKSVA-------------AQAG-----------------AAIQGAFTSAPSYPVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKSTRVVPNHALRNSIDEWRRE 1344
S++E+ L + G+ SS LIV VDFT+SNEW+G + +S+H + G+ NPY+ + I R L+ + I +GFGD +T D VF F G P + L+ L RY E+AP V+L+GPTSFAP I++A+ V DSG +YH LVIIADGQVT+ ER+T+ AI AS PLSI+M+GVG+GPWD R FD R+P RR+DNF+FV + + +R + L L E+P+QY+ I+ LGL I G+ D PG + + SVA A AG A+++ FT S R++ + P +F CP+T E+M DPV+ DG+SY+R ++ W + H TSPM+N L + PNHALR+SI E+ E
Sbjct: 33 SLDEVKVALRKNGLESSSLIVAVDFTKSNEWSGAVSFQHRSLHWL-GEEANPYEVAMSIIARTLQSFDDDGLIPAFGFGDATTGDAGVFHFFRGGIPAQGLEALAYRYRELAPHVKLAGPTSFAPAIYQAMRTVCDSGGQYHILVIIADGQVTRPTDTPPNYCSKQERETIDAIVNASELPLSIVMVGVGDGPWDVMREFDDRIPQRRWDNFQFVNFTEIAAAYSSMPQRMETIFALRTLMEIPEQYKIIQKLGLLGRRTARIAGIKVMDPPGPVSGYGAAVQPSVAPPQQANFVNPSPVAAAGPSLLPEPGNTSIQNPGSASMRALFTKGSSM---LRESTPEGPPPMFICPITQEIMKDPVMAADGYSYDRSSITQWLQTHHTSPMTNTQLPHKTLTPNHALRSSIMEYLEE 442
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A8J9RJQ7_9CHLO (Probable E3 ubiquitin-protein ligase RGLG2 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RJQ7_9CHLO) HSP 1 Score: 266 bits (681), Expect = 2.280e-76 Identity = 174/477 (36.48%), Postives = 236/477 (49.48%), Query Frame = 1
Query: 295 VNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLVDRR-------KQDAL-VLSALAEVPDQYRAIRTLGLIRGLADGPGSSGILKSVAAQAGAAIQGA---FTSAPSYP--------------------VDNRDNPE-------------------------------------------------------------------------------------DEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKSTRVVPNHALRNSIDEWRR 1341
+ E+ + L G+ SS LI+G+DFT+SN W+G+ +G S+H V GQ NPY++ + + R L P + N I YGFGDEST D VF LP +QPC+ L+ +L RY IAP V+L+GPTSFAPLIH+A+ V SGM+YH L+++ADGQVT+ ER T+ AI AS++PLSI+M+GVG+GP+D R FD LP RRFDNF+FV+ V R K +AL L AL E+PDQYR + LGLI G A P L A A+ A +APS+P N +P DE +F CP+T +VM DPV+ DG++YER A+E+W NH TSP+SN L + ++ NH+LR++I EW++
Sbjct: 34 LEEVQNALRINGLESSQLIIGIDFTKSNTWSGKHSFGGLSLHHV-GQQLNPYEQAISIVARTLAPFDDDNQIPAYGFGDESTHDTHVFSLLPRNQPCQGLEQVLWRYRTIAPHVKLAGPTSFAPLIHQAMRDVAASGMQYHILLLLADGQVTRSVELNPGEYSNQERATMDAIVMASNFPLSIVMVGVGDGPFDMMREFDDALPTRRFDNFQFVDMSRVMRETRGQPPEKAEALFALRALMEIPDQYRTLLRLGLIGG-APNPSIMARLMPPALGPPPAVLAAERVAATAPSFPGSPIATNGSFGNLSFVPHSQAQNVPHPHLHAGGPLGAGPAASSSHEDLIEERLRHELQQQQVPTAPYPSLSYTVGISTPPPSAYASPSVAAPADRPIGQDSSTHGVHGARLDLDEPDPMFLCPITQDVMKDPVMAADGYTYERLAIESWLENHVTSPISNEQLPNKSLIANHSLRSAILEWQQ 508
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A835SM75_CHLIN (U-box domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SM75_CHLIN) HSP 1 Score: 266 bits (680), Expect = 6.500e-76 Identity = 172/488 (35.25%), Postives = 239/488 (48.98%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLV------DRRKQDAL-VLSALAEVPDQYRAIRTLGLIRGLA------------------DGP--------GSSGILKSVAAQAGA-------------------------------------------------------------------------AIQGAFTSA----------------PSYPVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKS-TRVVPNHALRNSIDEWRRERG 1350
S+ ++ +L + G+ SS LIV VDFT+SNEWTG+R +G +S+H + G+ PNPY+E + IGR L + I CYGFGD +T D SVF FL DQPCR L+ L RY E+ P ++++GPTSFAP I +A IVE SG +YH L+++ADGQV++ E++T+ AI +ASS PLSIIM+GVG+GPWD + FD LP R FDNF+FV + DR +++AL L AL E+P+QY AI+ +G++ G A D P +SG S AA AG Q A TS P P + P+ +F CP+T +VM DPV+ DG++YER A+ W SP++NA + ++PNH LR+SI EW+++ G
Sbjct: 58 SLEQVQDDLRKNGLESSNLIVAVDFTKSNEWTGKRSFGGRSLHAI-GEQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDQPCRGLEQALWRYRELCPYIRMAGPTSFAPAIRQAARIVEGSGGQYHILLLVADGQVSRPSGMPEHHKSEQEQETINAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERSFDNFQFVNFSELMATTQGDRTRREALFALRALMEIPEQYNAIQRMGILGGTAAAQLARSRTQRRRGNPPLDPPVPPHLMSGSTSGPSTSAAAGAGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPPRPPSASCSGTYXXXXXXXXXXXXXXXXXXXGPSKGTQSARTSGXXXXXXXXXXXXXXXTPVAPAASGPVPDP----MFVCPITQDVMRDPVIATDGYTYERSAITDWLARKAVSPLTNAKMPGGNTLIPNHNLRSSIMEWKQKNG 540
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A835Y3U0_9CHLO (U-box domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3U0_9CHLO) HSP 1 Score: 264 bits (675), Expect = 1.030e-75 Identity = 164/448 (36.61%), Postives = 232/448 (51.79%), Query Frame = 1
Query: 271 DRDATLDSVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLV------DR-RKQDALVLSALAEVPDQYRAIRTLGLIRGLA------------------DGPGSSGIL----------------------------------------KSVAAQAGAAIQGAFTSAPSYPVDNR---DNPEDEVPQ-------VFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKSTRV-VPNHALRNSIDEWRRERG 1350
D+ TLD V + L R G+ SS LIV VDFT+SNEWTG+ + +S+H + G +PY+E + IGR L + I CYGFGD +T D+SVF FL GD+PC+ L+ L RY E+ P V+++GPTSFAP I +A IVE SG +YH L+++ADGQV++ E++T+ AI +AS PLSIIM+GVG+GPWD + FD LP R FDNF+FV + DR R++ L AL EVP+QY AI+ G++ + D P +L K+++A GA S + N P D P ++ CP+T ++M DPV+ DG++YER A+ W + SP++N P+ V +PNH LR++I EW++ G
Sbjct: 52 DKYQTLDQVTDA---LRRGGLESSNLIVAVDFTKSNEWTGKVSFQGRSLHAI-GDVASPYEEAISVIGRTLSAFDDDGLIPCYGFGDATTGDKSVFSFLAGDKPCQGLEQALWRYRELCPYVRMAGPTSFAPAIRQACSIVEASGGQYHILLLVADGQVSRSSDLPKGRFSEQEQETIDAIVEASFLPLSIIMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDIMNSTGMDRQRRETVFALRALMEVPEQYSAIQKAGIMGSSSTAAANRSXXXXXRGNPPLDPPVPQHMLTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNKTMSADGSRPTGGAGASGAAAQTRNSYSGGTPADPAPAAGAQPDPMYLCPITQDLMTDPVIATDGYTYERAAITDWLKRKSVSPLTNQPMPGGAVLIPNHGLRSAIMEWKQRNG 495
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: F6I7K3_VITVI (RING-type E3 ubiquitin transferase (Fragment) n=4 Tax=Vitis vinifera TaxID=29760 RepID=F6I7K3_VITVI) HSP 1 Score: 258 bits (660), Expect = 2.920e-74 Identity = 140/293 (47.78%), Postives = 185/293 (63.14%), Query Frame = 1
Query: 187 SLRSSSAYH-LAALIRDPNKT--KSRLKRDGDRDATLDSVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLVDRR------KQDALVLSALAEVPDQYRAIRTLGLI 1002
S+ SSS YH +A DP ++ ++R R GD SV ++ L AG+ SS LIVG+DFT+SNEWTG R + KS+H V G NPYQ+ + IGR L + N I CYGFGD +T D+ VF F P D+PC + +LSRY E+ P ++L+GPTSFAP+I AIEIV+ SG +YH LVIIADGQVT+ E++T+ AI KAS YPLSI+++GVG+GPWD + FD +P R FDNF+FV + RR K+ L+AL E+P QY+A L L+
Sbjct: 47 SIPSSSPYHSYSARYVDPERSGLQARYSRIGD---DYSSVEQVTEALYEAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHHV-GDSLNPYQQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQEVFSFFPDDRPCNGFEEVLSRYKELVPQIRLAGPTSFAPIIETAIEIVDTSGGQYHVLVIIADGQVTRSVDTHYGQLSRQEQNTINAIVKASEYPLSIVLVGVGDGPWDVMQQFDDNIPSRAFDNFQFVNFTDITRRNTSISKKEADFALAALMEIPSQYKATLDLHLL 335
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Match: A0A2K3DCY0_CHLRE (U-box domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DCY0_CHLRE) HSP 1 Score: 259 bits (663), Expect = 1.200e-73 Identity = 163/481 (33.89%), Postives = 235/481 (48.86%), Query Frame = 1
Query: 292 SVNELASELERAGVTSSGLIVGVDFTRSNEWTGQRCYGAKSMHEVTGQGPNPYQEVLEAIGRGLEPMNASNNIWCYGFGDESTTDESVFCFLPGDQPCRNLQHLLSRYSEIAPAVQLSGPTSFAPLIHKAIEIVEDSGMKYHCLVIIADGQVTK------------ERDTVKAIQKASSYPLSIIMIGVGEGPWDTCRVFDTRLPGRRFDNFRFVEHRLV------DRRKQDAL-VLSALAEVPDQYRAIRTLGLIRGLAD--------------------------------------------------------------GPGSSGILKSVAAQ-----------------------AGAAIQGA-----------------------FTSAPSYPVDNRDNPEDEVPQVFACPLTLEVMIDPVVCEDGHSYERGALEAWFRNHRTSPMSNAPLKS-TRVVPNHALRNSIDEWRRERG 1350
S+ ++ +L + G+ SS LIV VDFT+SNEWTG+R +G++S+H + G PNPY+E + IGR L + I CYGFGD +T D SVF FL D+PCR L+H L RY E+ P ++++GPTSFAP + +A IVE SG +YH L+++ADGQV++ E+DT+ AI +ASS PLSI+M+GVG+GPWD + FD LP R FDNF+FV + DR +++AL L AL E+P+QY AI+ +G++ A GP ++G+ + AG Q A P P + P+ +F CP+T +VM DPV+ DG++YER A+ W SP++N + ++PNH LR+SI EW+++ G
Sbjct: 50 SLEQVQEDLRKNGLESSNLIVAVDFTKSNEWTGKRSFGSRSLHAI-GDQPNPYEEAIGVIGRTLSAFDDDGLIPCYGFGDVTTGDSSVFSFLADDKPCRGLEHALWRYRELCPYIRMAGPTSFAPAVRQASRIVEASGGQYHILLLVADGQVSRPSGLMDHQKSEQEQDTIDAIVEASSLPLSIVMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMATTQGDRARREALFALRALMEIPEQYNAIQRMGILGRTAGAQVARSRTQRRRGNPPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGPLAAGLAAYPPPRXXXXXXXXXXXXXXXXXXXXXXXAGKGTQSARXXXXXXXXXXXXXXXXXXXXXXXXPTPMAPAASGPVPDP----MFVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQKMPGGNALIPNHNLRSSIMEWKQKNG 525 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18744.1 >prot_F-serratus_M_contig75.18744.1 ID=prot_F-serratus_M_contig75.18744.1|Name=mRNA_F-serratus_M_contig75.18744.1|organism=Fucus serratus male|type=polypeptide|length=443bp MHGGGPGGRHGSMYGGGPGGGHGPMHDPHRSWHGDDIRIAMTILLIALGWback to top mRNA from alignment at F-serratus_M_contig75:92867..99449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18744.1 ID=mRNA_F-serratus_M_contig75.18744.1|Name=mRNA_F-serratus_M_contig75.18744.1|organism=Fucus serratus male|type=mRNA|length=6583bp|location=Sequence derived from alignment at F-serratus_M_contig75:92867..99449+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:92867..99449+ >mRNA_F-serratus_M_contig75.18744.1 ID=mRNA_F-serratus_M_contig75.18744.1|Name=mRNA_F-serratus_M_contig75.18744.1|organism=Fucus serratus male|type=CDS|length=2658bp|location=Sequence derived from alignment at F-serratus_M_contig75:92867..99449+ (Fucus serratus male)back to top |