mRNA_F-serratus_M_contig748.18714.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig748.18714.1
Unique NamemRNA_F-serratus_M_contig748.18714.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig748.18714.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.830e-77
Identity = 189/328 (57.62%), Postives = 212/328 (64.63%), Query Frame = 2 
Query:   41 GRG---VWRKLGQGGEASVATAHTMPGVYRKWDHKPRNPMPGPAWNTAPKDTVIGD--AGRVVPGAGTGMPTDKVAFEARGLDWNKPSISRSRPLDRSRRGASEGRNSREKLSQCFENDWEEVSNARRKRGGQLDDSDSDSRQRP--YVARKLRAAPFWFVPGVTLGGSNCRGWFPTRQDWYAWGMPQCVYVPLEPSTEDRMEAMRYGHEVPIGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTNAEREATREAQAGAQAKTLAGRSRESLDREEEEQLKEVIKASLGQALRPGEEDDRDVIAALEISKRNS---SRGEEDDPDTF 994
            GRG   V RKLGQG    VAT HTM GVYRKWD + RNP+    W T PK+  + +    RVVPGA  G     VAF+ARGLD N    S +    R RR                   WE  S   RKR GQ      ++R  P  YV RK  AAPFW  PGV  G SNCRGWFPTRQDW A G+PQC+YVPLEPSTEDR+EAMR GHE  +GLTLEEDEERLMRIAIRESAAESRRAYEKKYGT AERE  REA A A+ K +A    ESL R+EE+QL EVIKASL ++L  GE+DDRDVIAALE SKR+S   +R E +D D  
Sbjct:  851 GRGGVSVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPV-DTTWKTTPKNKEVDEDLTKRVVPGASRGQ----VAFQARGLDLNSNKAS-ALAKPRGRRHGXXXXXXXXXXXXXXXXXWEAAS---RKRRGQ-----KETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRREAHAKARVKAMA--ECESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKRDSEYNAREEGEDADVL 1162
[Close]
BLAST of mRNA_F-serratus_M_contig748.18714.1 vs. uniprot
Match: D7FRG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 4.790e-53
Identity = 133/230 (57.83%), Postives = 149/230 (64.78%), Query Frame = 2 
Query:  206 RVVPGAGTGMPTDKVAFEARGLDWNKPSIS-RSRPLDRSRRGASEGRNSREKLSQCFENDWEEVSNARRKRGGQLDDSDSDSRQRP--YVARKLRAAPFWFVPGVTLGGSNCRGWFPTRQDWYAWGMPQCVYVPLEPSTEDRMEAMRYGHEVPIGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTNAEREATREAQAGAQAKTLAGRSRESLDREEEEQLKEVIKASL 886
            RVVPGA  G     VAF+ARGL+ N    S R++P  R R+           + +  E  WE  S   RKR GQ      ++R  P  YV RK  AAPFW  PGV  G SNCRGWFPTRQDW A G+PQC+YVPLEPSTEDR+EAMR GHE  +GLTLEEDEERLMRIAIRESAAESRRAYEKKYGT AER              +A   RESL R+EE+QL EVIKASL
Sbjct:    8 RVVPGASKGQ----VAFQARGLELNSNKASARAKPRGR-RKAXXXXXXXLRTVKEEKEEAWEAAS---RKRRGQ-----KETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXXXXAMA--ERESLQRDEEKQLMEVIKASL 222
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig748.18714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J997_9PHAE1.830e-7757.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG7_ECTSI4.790e-5357.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig748contigF-serratus_M_contig748:118403..127927 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons10
Model size3214
Cds size2637
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig748.18714.1prot_F-serratus_M_contig748.18714.1Fucus serratus malepolypeptideF-serratus_M_contig748 119140..127453 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932252.3188012-UTR-F-serratus_M_contig748:118402..1184471622932252.3188012-UTR-F-serratus_M_contig748:118402..118447Fucus serratus maleUTRF-serratus_M_contig748 118403..118447 +
1690964219.2038624-UTR-F-serratus_M_contig748:118402..1184471690964219.2038624-UTR-F-serratus_M_contig748:118402..118447Fucus serratus maleUTRF-serratus_M_contig748 118403..118447 +
1622932252.3335624-UTR-F-serratus_M_contig748:119081..1191391622932252.3335624-UTR-F-serratus_M_contig748:119081..119139Fucus serratus maleUTRF-serratus_M_contig748 119082..119139 +
1690964219.2143972-UTR-F-serratus_M_contig748:119081..1191391690964219.2143972-UTR-F-serratus_M_contig748:119081..119139Fucus serratus maleUTRF-serratus_M_contig748 119082..119139 +
1622932252.507941-UTR-F-serratus_M_contig748:127453..1279271622932252.507941-UTR-F-serratus_M_contig748:127453..127927Fucus serratus maleUTRF-serratus_M_contig748 127454..127927 +
1690964219.3500392-UTR-F-serratus_M_contig748:127453..1279271690964219.3500392-UTR-F-serratus_M_contig748:127453..127927Fucus serratus maleUTRF-serratus_M_contig748 127454..127927 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932252.347628-CDS-F-serratus_M_contig748:119139..1192831622932252.347628-CDS-F-serratus_M_contig748:119139..119283Fucus serratus maleCDSF-serratus_M_contig748 119140..119283 +
1690964219.2335455-CDS-F-serratus_M_contig748:119139..1192831690964219.2335455-CDS-F-serratus_M_contig748:119139..119283Fucus serratus maleCDSF-serratus_M_contig748 119140..119283 +
1622932252.3593621-CDS-F-serratus_M_contig748:120209..1204281622932252.3593621-CDS-F-serratus_M_contig748:120209..120428Fucus serratus maleCDSF-serratus_M_contig748 120210..120428 +
1690964219.2427623-CDS-F-serratus_M_contig748:120209..1204281690964219.2427623-CDS-F-serratus_M_contig748:120209..120428Fucus serratus maleCDSF-serratus_M_contig748 120210..120428 +
1622932252.3746178-CDS-F-serratus_M_contig748:121230..1213681622932252.3746178-CDS-F-serratus_M_contig748:121230..121368Fucus serratus maleCDSF-serratus_M_contig748 121231..121368 +
1690964219.266379-CDS-F-serratus_M_contig748:121230..1213681690964219.266379-CDS-F-serratus_M_contig748:121230..121368Fucus serratus maleCDSF-serratus_M_contig748 121231..121368 +
1622932252.3884075-CDS-F-serratus_M_contig748:122131..1222611622932252.3884075-CDS-F-serratus_M_contig748:122131..122261Fucus serratus maleCDSF-serratus_M_contig748 122132..122261 +
1690964219.2777085-CDS-F-serratus_M_contig748:122131..1222611690964219.2777085-CDS-F-serratus_M_contig748:122131..122261Fucus serratus maleCDSF-serratus_M_contig748 122132..122261 +
1622932252.405947-CDS-F-serratus_M_contig748:122881..1230391622932252.405947-CDS-F-serratus_M_contig748:122881..123039Fucus serratus maleCDSF-serratus_M_contig748 122882..123039 +
1690964219.2863595-CDS-F-serratus_M_contig748:122881..1230391690964219.2863595-CDS-F-serratus_M_contig748:122881..123039Fucus serratus maleCDSF-serratus_M_contig748 122882..123039 +
1622932252.426485-CDS-F-serratus_M_contig748:123750..1238721622932252.426485-CDS-F-serratus_M_contig748:123750..123872Fucus serratus maleCDSF-serratus_M_contig748 123751..123872 +
1690964219.295262-CDS-F-serratus_M_contig748:123750..1238721690964219.295262-CDS-F-serratus_M_contig748:123750..123872Fucus serratus maleCDSF-serratus_M_contig748 123751..123872 +
1622932252.44685-CDS-F-serratus_M_contig748:124615..1257021622932252.44685-CDS-F-serratus_M_contig748:124615..125702Fucus serratus maleCDSF-serratus_M_contig748 124616..125702 +
1690964219.303656-CDS-F-serratus_M_contig748:124615..1257021690964219.303656-CDS-F-serratus_M_contig748:124615..125702Fucus serratus maleCDSF-serratus_M_contig748 124616..125702 +
1622932252.466037-CDS-F-serratus_M_contig748:126173..1267851622932252.466037-CDS-F-serratus_M_contig748:126173..126785Fucus serratus maleCDSF-serratus_M_contig748 126174..126785 +
1690964219.3152316-CDS-F-serratus_M_contig748:126173..1267851690964219.3152316-CDS-F-serratus_M_contig748:126173..126785Fucus serratus maleCDSF-serratus_M_contig748 126174..126785 +
1622932252.490612-CDS-F-serratus_M_contig748:127426..1274531622932252.490612-CDS-F-serratus_M_contig748:127426..127453Fucus serratus maleCDSF-serratus_M_contig748 127427..127453 +
1690964219.3333144-CDS-F-serratus_M_contig748:127426..1274531690964219.3333144-CDS-F-serratus_M_contig748:127426..127453Fucus serratus maleCDSF-serratus_M_contig748 127427..127453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig748.18714.1

>prot_F-serratus_M_contig748.18714.1 ID=prot_F-serratus_M_contig748.18714.1|Name=mRNA_F-serratus_M_contig748.18714.1|organism=Fucus serratus male|type=polypeptide|length=879bp
MPGVYRKWDHKPRNPMPGPAWNTAPKDTVIGDAGRVVPGAGTGMPTDKVA
FEARGLDWNKPSISRSRPLDRSRRGASEGRNSREKLSQCFENDWEEVSNA
RRKRGGQLDDSDSDSRQRPYVARKLRAAPFWFVPGVTLGGSNCRGWFPTR
QDWYAWGMPQCVYVPLEPSTEDRMEAMRYGHEVPIGLTLEEDEERLMRIA
IRESAAESRRAYEKKYGTNAEREATREAQAGAQAKTLAGRSRESLDREEE
EQLKEVIKASLGQALRPGEEDDRDVIAALEISKRNSSRGEEDDPDTFTES
NSSSAFRRRQRHAEQTNQPGALSPRSGGASSIEAPSQGLTGQQTEQGEDS
PDPASVTSFFSSPADQQPLLPLLGTRPPLRRSEKLCQLASSAAGSGSMSK
TPSIGDVREPPPRSWNFEVSGPTPQGDTIVQHRRERKASKSRRLLGHGLA
GEVVAEGSTTGTAWPAESQPFPPPGLPLPQSLQSSPSFVPIPSEERPRPT
EDRLGIASSRRPSGPHAAISPSRRLDVGSPSVPDAPPGFAPMTAATNTAE
RTADVLARGMQPLADQVTQPPPGGSDIGSGDAGVPPLLSACDGQIARPSA
SLVPVGGSAEDEVLENVLKASKRTGMVAPLRTATDEERELEAALEASRQA
QAIREQEERDAKAAVYMALELSFMESAAHHDLPAVFNQAVSLAKPVAAET
LLPVRSTASTPFTEACTGDGSMARVEAPVPANLGKGWALQEVAESILTLA
YPNDVPEGAGSRVQPESISRQPAAGKGCTEERKVRIATVEETQVDETLTL
TESTSVGGAEVDDSDEELARVLEKSRLLAEQEASLRRERVGDEEDVMAKV
LEESRRAQEEMDLEYRELQKALRASLQT*
back to top

mRNA from alignment at F-serratus_M_contig748:118403..127927+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig748.18714.1 ID=mRNA_F-serratus_M_contig748.18714.1|Name=mRNA_F-serratus_M_contig748.18714.1|organism=Fucus serratus male|type=mRNA|length=9525bp|location=Sequence derived from alignment at F-serratus_M_contig748:118403..127927+ (Fucus serratus male)
GGGTAGGATCGCGGAGGAGGAGGATGTTGAAGTTATTAGCGGGAGGTGAC
TGTCGGAAGGCCGCGACTGATCTCTTAGTACAGCGCTTTGCGACTAACCA
ACACCACCCGTCTGTATGAGATGTGTATCAGATGTTGTATCAGATGTTGA
AGAGGGGTTTTGAGGGAGAGGGGGCGTTTTGAAGCTGGGAAAAATACCTT
CCCCATTGTCCTGGTATTTGTTGCAAGTTTTACTCAAAGGTCGAGCGGAG
GTACCGATAGTTGCCCCAGCAAGTCGTATCTCGCTCCCACGCTACATCTA
TCATTCTATGCTATGCTAAACTATGCTACACTATACTATCGATCGATAAC
TGCCAAAGCTGTTAATAGGGTTGCTGTCTCCGGAACATATTAAGGTAATA
GCAAGGGCTGTACGCAATGCTGTACTGTATGTACTGTATATGCTGTACAG
TGTCGTGTTTTGTGGGTTCGCTGGGGCGCTCTTGATATGGAAGATAACCG
CGAGTTAGTTGGAAACAGAAAAGATCCCCGCATGGATTAGCTTTGTCTTC
GAGTTCGTTGCGTGATTCTGATATCGGTCCACGGACGCTAGAGTCATCCA
TCGCATGCAACACACCGTGCAATGACGCGCTTCACGTGTCCGAAAATCGT
CAGCTCGCTTGCTCTTCCCCTGACTCCAGGGGAGTGTGGAGGAAGCTAGG
GCAAGGAGGGGAGGCTTCCGTAGCCACCGCGCACACCATGCCCGGCGTTT
ACCGCAAGTGGGACCACAAACCACGCAACCCGATGCCGGGTCCTGCGTGG
AACACCGCTCCGAAGGACACCGTAATTGGCGACGCCGGCAGAGTCGTACC
CGGGGCAGGGACGGGGATGCCTACGGACAAGGTGTGTGTGTGTGTGTGTA
TTTATTAAATTGCGCATAACCACGCAATCCGGCCCTGTCATCCTAGTCAT
TCTATGCCACTCGCATTGATCCTCCCGAGGGGGCTCGGGAGGATCAATGA
TACTTATGTGTGTGTGTGTGTGTGTATAATTATTAAATTGCACATAACCG
CGCAATCCGGCCCTGTCATCGTAGTCATTCTATGTGTGTGTGTGTGTGTG
TGTATAATTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTCATCCT
AGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGTATCAATAATA
CTTTTTGTGTGTGTGTGCGTGTGTGTTTATTAAATTGCACATAACCGCGC
AATCCGGCTCTGTTATCCTAGTCATTATATGCCAGTGTGTGTGTGTGTGT
GCGTGTGTGTTTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTCAT
CCTAGTCATACTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATG
AGTGTGTTGTGCGTGTGTATGTATTTATTAAATTGCACATAACCGCACAA
TCCGGCCCTGTCATCCTGCATTCTATGCCACTCGCATGTGTGTGTGTGTG
GGGGGGGGGGGATCTTAAATAGCACCCAACCGCGCCATCAGGCCGTCATC
GTCATCGTGATCATTTTATGCTACTCTCATTGACCCTCCTAAGTGGGGAT
CAGTCATACTTGTTAAAAGTAATACCTGGTAGTGTGTGGGGGGGAGGGGG
AGTTGTGTGCTTGCGAGGACATCATTTGATTGTCCATGGAGGCAACACGA
TTCTTACACCTGAGTAAGAAGGGGCTGATGCGATGCGCTGGGCAAATTAG
CAATCTCTTACCGTGATCGCGTTGACTCTCTCGTCCTACTTTGGTGGCCA
TGGATAGGTTGCCTTCGAGGCCAGAGGGTTGGACTGGAACAAGCCGTCCA
TATCAAGGAGTCGACCTTTGGACCGGAGTCGACGCGGGGCCAGCGAGGGC
CGAAATTCCCGCGAAAAGTTGTCCCAATGTTTTGAAAACGATTGGGAAGA
GGTCTCGAACGCGCGACGGAAGCGAGGGGGGCAGCTGGATGACAGCGACA
GTGACAGTCGTCAACGGCCCTACGTGGTGAGGTGTTGGCGTCTGAACTCC
CCCCTTCCAAGTATTGTATTATCGTGTTGTATTATTGTATAGTATTATCG
TACTATACTATTATATCGTATTCTATTATCGTATTCTATTATTAATATCG
TATTGTATGATCGGATTATATTATCGGATTATATTATCGTATTATATCAT
CGTACATGAATGTGTTGGAAGCATGGGTTGTAGGTAACTATGTATGGTCA
CACATAGTCAGGAAATGATTATGGAGCCTGTTTTCAAGTTAAACGTATGT
CTTACATTTACGTCTGAGTAATGTTCGATGTCCTTTAGTGGCAGGAAGAC
TAATGAACAATCGGCGCGTCTTAAAGTATTATCTTATACCAGGTATTCAT
TTATTATCGCTTCGTGCATTTGTGAGATGGTGACTATTGTACGCTGCTGA
TGAAAAAAAGCCAGTGCCCACTGGGATTGGGTTCGGTGTGCACCTGCAAG
ATCCTCTCTCCAACTTCACACCCTATAAGATCCTTTTTCTCGCCCAGCAT
GTCAACCAAGGCTCTCCTGCCTCCAGTCTGTTGTGTTTATCTTTGCTCTT
TGCTCCGAACTTCTGTTGCCACGTAGATATATATATATACTGCCGTACTC
CCGTGTATGGTTGGTATAGAACTATCGATTTCGGGTCATCGTCGATCGGC
TGGACATTCTGGGGGTGTGTGGGTCATTCCCGATGGTACAAGGGTTTTAT
ACTATTAGTGTGTATTGATGGGAAAGGGGGGGCTCATCGCTGCCGTCCCC
TGTCTCCCCGATGCGGTGCATTTTTCAGGCTAGGAAACTCCGTGCAGCTC
CGTTCTGGTTCGTTCCCGGGGTGACCCTCGGGGGCTCGAACTGTCGCGGC
TGGTTCCCGACTCGCCAAGACTGGTACGCGTGGGGCATGCCTCAGTGTGT
TTATGTCCCTCTCGAGGTGAGGGCCAGCACGAGGGAACAGCAGGGGCGGC
CGAACAGCTACCGCGATACAGTTCCGCACCCGATTAGGGGTAGCCAAGCC
GTGGTCGCGTATAGATTGCGACTCTCACCTTGGCCCGCCAAGTGTCGGAA
GTACCGACTTGCGCCATTATTAGTTTCAGTATAATTATATTTAGTCGTGG
TCATAGTCTATACCTTGTAGATCATAGATCATCAATAACACAACGGATGG
TCTGACTTACCGGAGCTATACATGTTCCTGCACTTGGTATGAAAGTCGGG
TCTTTTGCTTCGTGAGTCAGTGACTGAGTGAGCTTTTTTCTTACCTTTTG
AGTCGAAGTCTAGTCTTTCCCCTCGCGAGGGTGATAATTCGTTAGTGGAT
GGCGTAGTGCAGTACGTATTGTTTTGAAACTCGCGTTGTCTCGGCGTGTC
AAGGACACGAGAGATTGAGAGATTTGTGGTCACGGCCGGTGACCACGTTC
GAGCTGCTACTATGTTGCACTCTAGCACTTGGTCGAACTCCCGCCAAGGT
CAACACATCACAGGGCCGAAGGCATGGATTTTCATTTTGACACGTTCAAA
ATCTCTTTACTTAGAATTAAAAAAGAAAAAAAAGCTCGCCTGCCTGTTTA
TAAGATTGGTCGGGCAAAACGAAACCGGCTGAGCGTTTCGCCATGTTTTT
TGTAGCCGTTTTTTTTGTCCGGATATGGGGATGCAATAGTTTTTTTCTCG
CTTGCCGCGTGACACCTCAAAAAAATAAGCCATCGACGGAGGACCGCATG
GAGGCCATGCGCTACGGGCACGAGGTGCCGATCGGGCTGACGCTGGAAGA
GGACGAGGAGCGGCTGATGAGGATCGCCATCAGGGAGTCGGCGGCAGAGT
CCAGACGTGGTAAGGAACCGCGCCACAACTCAAGGGCGTGTGGGCTGTGC
CTGTTATTATATTAATTTTAATAGTACGCCAAGGTTGTCGAACGCATCTG
AAGTGCTAAGATGATTTTCATACAGGCCCTTCCATGAGGCGTGCCTTCGC
TCTCCCCCGATACAGTATTCATGTATATATAGTCATCACATGTAGCAGAC
TGGGCATCCGACGGGCGTGGTTGTCAATTTTGCTTGTGGTCGCCTGATCA
GGGAAAATAACTTTTCTCCTGTCCCTGTTCGAACCTGGGAATTTCATCTC
GCGAGACACGTTCGCCCGTGTAAAGTCTTCTATTTTTATTTTTTTTCTGA
GCGCGTGCTTCCCGGACACCAAAACAATATATAGAAAACAATATATAGAA
AAGCGAGCGAACGTGTTTTGTTCGTTTGTCTTCTCTGGTATGGTTCCAAA
AAGCACTTTTTGGCCAGACAGAGGCCACTGTCCACCCTGACCGAACTACA
GATCCATTATGAGTAATGTAGACTCTTGCAGTGTACGGAGTAGCACCGTA
TCAGGATGTAGCAACAATTAATCACGTCGTGTGTGCTCCGCGGGTCTGGG
CGGGGCAAACTTTCCTGCTCTGAAACAAGCCTACGAGAAGAAGTACGGGA
CAAACGCCGAGCGGGAGGCTACGCGCGAGGCCCAGGCTGGTGCTCAGGCG
AAGACTCTGGCGGGACGGAGCCGGGAGAGCCTGGATCGGGAAGAGGAGGA
GCAGCTCAAGGAAGTCATCAAGGCTTCCCTGGGCCAAGTAGGGTGGTTGA
TATTTGTTGTAAACATGGCATACATACGTTGGAAATGTCTTGTAAATATG
TTAAATACCAGGTATTTGTGTTTGGGGCGGGGGGTGTAGGATGGGGATAT
TAAAAAGGTTATTTTGTCATCAGCAGAGATTAGGCGCTCGAGTTGTTGTA
ATTGTCGGGGCGGTTTGGTGGATGGATCGTCTGTTTTCTTTTCTGCGCGT
GTTGAGTTTTAACTCGAAAGGAGGCGTGCTGCTGGGAGTAATGGTGAATG
GTTCGTTGGAATGGGATTATATTTTTTGGGACAAAGTGTATGGTGTAAGG
TTGTGGACGGGGGGAGGATCGCGATAGTATATTGAGGTTTATTGGGATGA
AATGATTGTCTTGAGTGAGCTGAAAACTTTGTTATCACTTTTTTGTACCT
ATTCATACATACTAATAATATTATTTACTAGACCAAACACAGCAGTTAGT
AGATTGTAGACTCAAATGCAAGCACTGCAGGAGCAGATTTGTTTCTGTTC
GACTAAACGCCACATGTCCACAAAAAAGCGCCCATCGCCCATACACGACC
TATACGTGACCTATATTAATAACAACGTAATAACACGCTACACCGTTGTA
CCTGCCTCCTCCAAGTTGGCCCGGCTCGAAACATGTCTTGTCGAACTGGC
TGTGTTACTTGTTTTTAATATACCGCGGGTGTTACCTCGGATCGGCAGGC
CTTGAGACCCGGGGAAGAGGACGATCGTGACGTCATCGCGGCTTTGGAGA
TATCCAAGCGAAACAGCTCGAGGGGCGAGGAAGATGATCCGGATACTTTC
ACAGAGTCAAACAGCTCAAGGTAACTCAAGGTTGGTGTGGTGCGGCTAAT
CTTATCGAGCGCTGCGTCTCGTTTCATTTTGGATTTTTTGGTTGCTACGT
TTCGTCGAGAAACGTGTGTGTACTGCAGTCTCATTTTTAGTTGCCCATGT
AACCTCGCAATCCGGCCGTTTTGTGCCATAATTAGATTCAAACCCACTCT
TGTTTGGTTAATGTGTGTTCTTCATCGCGCTGCCAGGACAATCAATGGGT
TCAAAGAGAAATCTGAACTAACCTAGGCCTTGTAAGCAAACATCAATGTA
TTGTCCCATATATATATTAAAAAAAACGTATCGCAACGGAAAGCTCCGAA
CTTGCCACCCGGAAACTTTCAATGTCGCCACGAAAATATTGTTGGTGCCG
TTCGTCATGCTGTGGTTCTCTACACGCCGGCCTCCGAGCCCTTGTCGAAA
TCCCGAAGGCAGTTGTGGCTTAGAGAGCTAAACACTTTCTGTGGACTTAC
CTTAGCCCTCAATCCCGCGGACAAAGACAAAAGACAACGCCATTGGCCCC
CCTGCCTTTCTTCCACCTTCTTTTTTTCTTTATAACATGGTAATCTAATA
TTAGTATTGCTTTTTTTTTTTTAGCGGTCGCCGTTTCCACAGCACTCACG
TTTGTGTGGGCAGGTCAGTGTTGAGTGATGAGTGTCACAGGGAAACGAAC
TGTTGGACGACTGCCAACAAGAGCACTTGCTAACGAATATGCCCAACACA
AATGTTTCTGAAGTGCGTTTCGCAGAAGGCAGCGCCACGCGGAGCAAACC
AATCAACCGGGCGCGCTTAGTCCTCGGAGCGGAGGAGCTTCGAGTATAGA
AGCCCCGTCGCAGGGTCTTACCGGTCAGCAAACGGAGCAGGGGGAAGATT
CCCCTGACCCGGCCAGTGTAACGAGCTTTTTTTCGTCACCCGCCGATCAG
CAACCCTTGTTGCCCTTACTCGGTACGCGCCCACCTTTGCGCCGCTCTGA
GAAACTTTGCCAGCTGGCCTCGAGCGCCGCGGGTTCTGGAAGTATGAGCA
AAACACCGTCAATTGGAGACGTTCGAGAGCCGCCCCCAAGATCTTGGAAT
TTTGAGGTTTCTGGGCCCACCCCCCAAGGCGATACGATTGTCCAACATAG
GAGAGAAAGAAAGGCATCGAAATCTCGGCGCCTGTTGGGGCACGGGCTTG
CGGGGGAAGTGGTTGCGGAAGGATCCACGACAGGGACGGCTTGGCCGGCA
GAGTCCCAGCCATTTCCTCCGCCTGGCTTGCCGTTGCCTCAGTCGCTGCA
GTCGTCGCCGTCTTTTGTCCCGATCCCTTCAGAGGAACGACCGCGCCCAA
CCGAAGATCGTCTTGGAATAGCATCGTCTCGACGACCGAGCGGTCCGCAT
GCGGCTATCAGTCCTTCTCGGCGACTCGACGTCGGTTCACCATCAGTGCC
CGATGCCCCACCCGGCTTTGCGCCTATGACTGCGGCTACAAACACTGCTG
AAAGAACCGCCGATGTCTTGGCGCGAGGGATGCAGCCGCTGGCGGATCAG
GTCACCCAACCACCTCCTGGTGGGAGCGATATCGGCTCGGGGGATGCCGG
CGTCCCTCCGCTATTGTCCGCATGCGATGGCCAAATAGCGCGGCCCTCGG
CTTCGCTCGTTCCGGTGGGTGGTAGTGCGGAAGATGAGGTACTGGAGAAT
GTCCTGAAGGCGTCTAAGAGAACCGGGATGGTTGCCCCATTGAGAACTGC
GACGGACGAGGAAAGGGAGTTAGAGGCCGCGCTGGAGGCGTCTCGACAAG
CCCAGGCCATACGGGAGCAGGAGGAGAGGGATGCTAAGGCGGCCGTTTAC
GTAAGAAAGAGAGAGAAATCGAGAGGCAGTGTTATTGTGATGTTTTTTTT
TTACGGGACATGAGAGCGAAGCTGGGGCACAAGAGCACAAGGACCTTGTG
TTCCTTGCTGTGGGTCGGATTGTTTTTTTTCAGATATCCCGGCCGGATGA
TTCATGCACAGGCTGCAAAAATCCCCATCATCATCGCTCTAATCAGATCA
GTCTTAGATGCGGCAGAGTTGATTAAACAGTAATTTTCCTGGGAATTGTT
GTTGTAGATAGCGTTTTATCCGCTAGACACGCCGAACCGAGCCTTCTTAT
TGTCCTCTTGCTTTTGTTGGGGTGTCTCTTTCGTCCCTTCCCTTTCCTGC
TCACTTCTCCTGTACCGTGTATTGTACCTTGTATTGTACCTTGTATTTTT
TTCCTTGCCCTGAGCGTTGTTTTCACCTTATACCTTATACCTCGTCCTGA
ACGGTTCTCTTCACGACAAAGATGGCATTGGAGCTCTCCTTCATGGAAAG
TGCCGCCCATCACGATCTACCAGCCGTCTTTAACCAAGCCGTGTCTTTGG
CGAAACCAGTCGCGGCAGAGACCCTTTTACCTGTCCGGTCCACAGCCTCA
ACGCCCTTTACGGAGGCATGCACAGGTGACGGCTCCATGGCTCGCGTCGA
GGCGCCGGTGCCCGCGAATCTTGGCAAAGGTTGGGCACTGCAGGAGGTTG
CCGAATCGATTTTGACGCTGGCTTATCCTAATGACGTCCCGGAAGGGGCT
GGTTCGAGGGTGCAGCCGGAGTCCATCTCTAGGCAACCGGCGGCAGGAAA
AGGATGCACGGAGGAGCGGAAAGTTCGGATAGCGACAGTAGAGGAGACGC
AGGTCGATGAGACCTTGACCTTGACCGAGAGCACCAGCGTCGGTGGGGCG
GAGGTCGACGACAGTGACGAGGAGCTCGCGAGGGTGCTCGAGAAGAGTCG
CCTGCTGGCCGAACAGGAGGCGTCACTAAGGAGGGAGAGAGTGGGAGACG
AAGAGGACGTGATGGCCAAGGTGCTCGAGGAATCGCGAAGAGCGCAGGAG
GAAATGGATCTCGAGTACCGGGAGCTTCAAAAGGTGAGTGACGCGTTATG
TCAGCGCCAGACGCAGGGGTCAGTCGTCGTTCACCTACCACAAAACTCTG
CGTGGTTTTTTGCAAGGTGTTTCTCAGAGATGTTGCTTGCataggtatAT
AGGTACTGGTATGGTATTAGTCTATTAATAGAATTAATATAAGTACAAGC
TGTCATCGGTCAAATCGAATCGAATCGGATCGAATCACGAATATTAACGT
TAGGCTACCCTGTGCTGTAGCTCCAGATTAGCACCTTGGACACCAGGTTG
ATTTGACGATTTGCCCACAAACCGACCTGCGAGGCTTCACGAGCAAAGGT
GTTATGATTCGTTTGCGATGAGGAAGGCGGTGTACGACAAAATTAGCTGT
GAAGTTGAAGTATATTTGTAAAAATAAAGAATTGCTTCGGTGTTCCAAGG
CTAAAATAGGTATTCGACATGAACTACCCTAGGGCCACATTATAATCTCA
TCTCGCTGTGTTCGCTGGTATGTTATACTCCGTATACTATTTTTAGTATC
GATTGTGTACATGTACGACGATCTTCACAGTCCTTCCGTTGCTCCAATCA
GTAGGGGAAAGACGATAAGCTAAAACCTATTCTGAAAAAAGGCAAAATTC
CAACCGTGATGCGTCTCCTGGCAGGCCTTGCGAGCATCCCTTCAGACGTG
AAGCGATGGTGTGCTCGCTCATCACACAACTTCTCACTTTTGCGACAGAA
GTTTTCATACCCACCCAACACCATCAGATGTGCGACGAATCTAAACCTGG
AACCATATCCATCAAGGCAGGCCCTTGGAGTAACGTCAAGCAGGGCTAGC
AAGCTGGAATGCAGGGTTCGTTCGAAGGCGGGCCTGGAACTCTGCGATCG
ATTCTCGTTGCCAAGGAATGACCTCGGACGTGATTGGGTAACAAGTTATA
GCCCTTAACCTCTTTTATCAGAGATTCTTCGTTAAGAGTAAATCGTTAGC
GTAATGAGATTTGTGATTGTTAATAGCATGATGAGACGATAAGGCTCTAG
ATTCAAGTAATGTCTGAGTCGTGGGTAAGTCTGTCCTGCTTTCACCTGAA
GTGTCACTCTCTAAAATCTCCCAAATCATTCAGAAGCACCGATATGCATC
AGCACAGCCGCAGTTTACATCTTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig748:118403..127927+

>mRNA_F-serratus_M_contig748.18714.1 ID=mRNA_F-serratus_M_contig748.18714.1|Name=mRNA_F-serratus_M_contig748.18714.1|organism=Fucus serratus male|type=CDS|length=5274bp|location=Sequence derived from alignment at F-serratus_M_contig748:118403..127927+ (Fucus serratus male)
ATGCCCGGCGTTTACCGCAAGTGGGACCACAAACCACGCAACCCGATGCC
GGGTCCTGCGTGGAACACCGCTCCGAAGGACACCGTAATTGGCGACGCCG
GCAGAGTCGTACCCGGGGCAGGGACGGGGATGCCTACGGACAAGATGCCC
GGCGTTTACCGCAAGTGGGACCACAAACCACGCAACCCGATGCCGGGTCC
TGCGTGGAACACCGCTCCGAAGGACACCGTAATTGGCGACGCCGGCAGAG
TCGTACCCGGGGCAGGGACGGGGATGCCTACGGACAAGGTTGCCTTCGAG
GCCAGAGGGTTGGACTGGAACAAGCCGTCCATATCAAGGAGTCGACCTTT
GGACCGGAGTCGACGCGGGGCCAGCGAGGGCCGAAATTCCCGCGAAAAGT
TGTCCCAATGTTTTGAAAACGATTGGGAAGAGGTCTCGAACGCGCGACGG
AAGCGAGGGGGGCAGCTGGATGACAGCGACAGTGACAGTCGTCAACGGCC
CTACGTGGTTGCCTTCGAGGCCAGAGGGTTGGACTGGAACAAGCCGTCCA
TATCAAGGAGTCGACCTTTGGACCGGAGTCGACGCGGGGCCAGCGAGGGC
CGAAATTCCCGCGAAAAGTTGTCCCAATGTTTTGAAAACGATTGGGAAGA
GGTCTCGAACGCGCGACGGAAGCGAGGGGGGCAGCTGGATGACAGCGACA
GTGACAGTCGTCAACGGCCCTACGTGGCTAGGAAACTCCGTGCAGCTCCG
TTCTGGTTCGTTCCCGGGGTGACCCTCGGGGGCTCGAACTGTCGCGGCTG
GTTCCCGACTCGCCAAGACTGGTACGCGTGGGGCATGCCTCAGTGTGTTT
ATGTCCCTCTCGAGGCTAGGAAACTCCGTGCAGCTCCGTTCTGGTTCGTT
CCCGGGGTGACCCTCGGGGGCTCGAACTGTCGCGGCTGGTTCCCGACTCG
CCAAGACTGGTACGCGTGGGGCATGCCTCAGTGTGTTTATGTCCCTCTCG
AGCCATCGACGGAGGACCGCATGGAGGCCATGCGCTACGGGCACGAGGTG
CCGATCGGGCTGACGCTGGAAGAGGACGAGGAGCGGCTGATGAGGATCGC
CATCAGGGAGTCGGCGGCAGAGTCCAGACGTGCCATCGACGGAGGACCGC
ATGGAGGCCATGCGCTACGGGCACGAGGTGCCGATCGGGCTGACGCTGGA
AGAGGACGAGGAGCGGCTGATGAGGATCGCCATCAGGGAGTCGGCGGCAG
AGTCCAGACGTGCCTACGAGAAGAAGTACGGGACAAACGCCGAGCGGGAG
GCTACGCGCGAGGCCCAGGCTGGTGCTCAGGCGAAGACTCTGGCGGGACG
GAGCCGGGAGAGCCTGGATCGGGAAGAGGAGGAGCAGCTCAAGGAAGTCA
TCAAGGCTTCCCTGGGCCAACCTACGAGAAGAAGTACGGGACAAACGCCG
AGCGGGAGGCTACGCGCGAGGCCCAGGCTGGTGCTCAGGCGAAGACTCTG
GCGGGACGGAGCCGGGAGAGCCTGGATCGGGAAGAGGAGGAGCAGCTCAA
GGAAGTCATCAAGGCTTCCCTGGGCCAAGCCTTGAGACCCGGGGAAGAGG
ACGATCGTGACGTCATCGCGGCTTTGGAGATATCCAAGCGAAACAGCTCG
AGGGGCGAGGAAGATGATCCGGATACTTTCACAGAGTCAAACAGCTCAAG
GCCTTGAGACCCGGGGAAGAGGACGATCGTGACGTCATCGCGGCTTTGGA
GATATCCAAGCGAAACAGCTCGAGGGGCGAGGAAGATGATCCGGATACTT
TCACAGAGTCAAACAGCTCAAGTGCGTTTCGCAGAAGGCAGCGCCACGCG
GAGCAAACCAATCAACCGGGCGCGCTTAGTCCTCGGAGCGGAGGAGCTTC
GAGTATAGAAGCCCCGTCGCAGGGTCTTACCGGTCAGCAAACGGAGCAGG
GGGAAGATTCCCCTGACCCGGCCAGTGTAACGAGCTTTTTTTCGTCACCC
GCCGATCAGCAACCCTTGTTGCCCTTACTCGGTACGCGCCCACCTTTGCG
CCGCTCTGAGAAACTTTGCCAGCTGGCCTCGAGCGCCGCGGGTTCTGGAA
GTATGAGCAAAACACCGTCAATTGGAGACGTTCGAGAGCCGCCCCCAAGA
TCTTGGAATTTTGAGGTTTCTGGGCCCACCCCCCAAGGCGATACGATTGT
CCAACATAGGAGAGAAAGAAAGGCATCGAAATCTCGGCGCCTGTTGGGGC
ACGGGCTTGCGGGGGAAGTGGTTGCGGAAGGATCCACGACAGGGACGGCT
TGGCCGGCAGAGTCCCAGCCATTTCCTCCGCCTGGCTTGCCGTTGCCTCA
GTCGCTGCAGTCGTCGCCGTCTTTTGTCCCGATCCCTTCAGAGGAACGAC
CGCGCCCAACCGAAGATCGTCTTGGAATAGCATCGTCTCGACGACCGAGC
GGTCCGCATGCGGCTATCAGTCCTTCTCGGCGACTCGACGTCGGTTCACC
ATCAGTGCCCGATGCCCCACCCGGCTTTGCGCCTATGACTGCGGCTACAA
ACACTGCTGAAAGAACCGCCGATGTCTTGGCGCGAGGGATGCAGCCGCTG
GCGGATCAGGTCACCCAACCACCTCCTGGTGGGAGCGATATCGGCTCGGG
GGATGCCGGCGTCCCTCCGCTATTGTCCGCATGCGATGGCCAAATAGCGC
GGCCCTCGGCTTCGCTCGTTCCGGTGGGTGGTAGTGCGGAAGATGAGGTA
CTGGAGAATGTCCTGAAGGCGTCTAAGAGAACCGGGATGGTTGCCCCATT
GAGAACTGCGACGGACGAGGAAAGGGAGTTAGAGGCCGCGCTGGAGGCGT
CTCGACAAGCCCAGGCCATACGGGAGCAGGAGGAGAGGGATGCTAAGGCG
GCCGTTTACTGCGTTTCGCAGAAGGCAGCGCCACGCGGAGCAAACCAATC
AACCGGGCGCGCTTAGTCCTCGGAGCGGAGGAGCTTCGAGTATAGAAGCC
CCGTCGCAGGGTCTTACCGGTCAGCAAACGGAGCAGGGGGAAGATTCCCC
TGACCCGGCCAGTGTAACGAGCTTTTTTTCGTCACCCGCCGATCAGCAAC
CCTTGTTGCCCTTACTCGGTACGCGCCCACCTTTGCGCCGCTCTGAGAAA
CTTTGCCAGCTGGCCTCGAGCGCCGCGGGTTCTGGAAGTATGAGCAAAAC
ACCGTCAATTGGAGACGTTCGAGAGCCGCCCCCAAGATCTTGGAATTTTG
AGGTTTCTGGGCCCACCCCCCAAGGCGATACGATTGTCCAACATAGGAGA
GAAAGAAAGGCATCGAAATCTCGGCGCCTGTTGGGGCACGGGCTTGCGGG
GGAAGTGGTTGCGGAAGGATCCACGACAGGGACGGCTTGGCCGGCAGAGT
CCCAGCCATTTCCTCCGCCTGGCTTGCCGTTGCCTCAGTCGCTGCAGTCG
TCGCCGTCTTTTGTCCCGATCCCTTCAGAGGAACGACCGCGCCCAACCGA
AGATCGTCTTGGAATAGCATCGTCTCGACGACCGAGCGGTCCGCATGCGG
CTATCAGTCCTTCTCGGCGACTCGACGTCGGTTCACCATCAGTGCCCGAT
GCCCCACCCGGCTTTGCGCCTATGACTGCGGCTACAAACACTGCTGAAAG
AACCGCCGATGTCTTGGCGCGAGGGATGCAGCCGCTGGCGGATCAGGTCA
CCCAACCACCTCCTGGTGGGAGCGATATCGGCTCGGGGGATGCCGGCGTC
CCTCCGCTATTGTCCGCATGCGATGGCCAAATAGCGCGGCCCTCGGCTTC
GCTCGTTCCGGTGGGTGGTAGTGCGGAAGATGAGGTACTGGAGAATGTCC
TGAAGGCGTCTAAGAGAACCGGGATGGTTGCCCCATTGAGAACTGCGACG
GACGAGGAAAGGGAGTTAGAGGCCGCGCTGGAGGCGTCTCGACAAGCCCA
GGCCATACGGGAGCAGGAGGAGAGGGATGCTAAGGCGGCCGTTTACATGG
CATTGGAGCTCTCCTTCATGGAAAGTGCCGCCCATCACGATCTACCAGCC
GTCTTTAACCAAGCCGTGTCTTTGGCGAAACCAGTCGCGGCAGAGACCCT
TTTACCTGTCCGGTCCACAGCCTCAACGCCCTTTACGGAGGCATGCACAG
GTGACGGCTCCATGGCTCGCGTCGAGGCGCCGGTGCCCGCGAATCTTGGC
AAAGGTTGGGCACTGCAGGAGGTTGCCGAATCGATTTTGACGCTGGCTTA
TCCTAATGACGTCCCGGAAGGGGCTGGTTCGAGGGTGCAGCCGGAGTCCA
TCTCTAGGCAACCGGCGGCAGGAAAAGGATGCACGGAGGAGCGGAAAGTT
CGGATAGCGACAGTAGAGGAGACGCAGGTCGATGAGACCTTGACCTTGAC
CGAGAGCACCAGCGTCGGTGGGGCGGAGGTCGACGACAGTGACGAGGAGC
TCGCGAGGGTGCTCGAGAAGAGTCGCCTGCTGGCCGAACAGGAGGCGTCA
CTAAGGAGGGAGAGAGTGGGAGACGAAGAGGACGTGATGGCCAAGGTGCT
CGAGGAATCGCGAAGAGCGCAGGAGGAAATGGATCTCGAGTACCGGGAGC
TTCAAAAGATGGCATTGGAGCTCTCCTTCATGGAAAGTGCCGCCCATCAC
GATCTACCAGCCGTCTTTAACCAAGCCGTGTCTTTGGCGAAACCAGTCGC
GGCAGAGACCCTTTTACCTGTCCGGTCCACAGCCTCAACGCCCTTTACGG
AGGCATGCACAGGTGACGGCTCCATGGCTCGCGTCGAGGCGCCGGTGCCC
GCGAATCTTGGCAAAGGTTGGGCACTGCAGGAGGTTGCCGAATCGATTTT
GACGCTGGCTTATCCTAATGACGTCCCGGAAGGGGCTGGTTCGAGGGTGC
AGCCGGAGTCCATCTCTAGGCAACCGGCGGCAGGAAAAGGATGCACGGAG
GAGCGGAAAGTTCGGATAGCGACAGTAGAGGAGACGCAGGTCGATGAGAC
CTTGACCTTGACCGAGAGCACCAGCGTCGGTGGGGCGGAGGTCGACGACA
GTGACGAGGAGCTCGCGAGGGTGCTCGAGAAGAGTCGCCTGCTGGCCGAA
CAGGAGGCGTCACTAAGGAGGGAGAGAGTGGGAGACGAAGAGGACGTGAT
GGCCAAGGTGCTCGAGGAATCGCGAAGAGCGCAGGAGGAAATGGATCTCG
AGTACCGGGAGCTTCAAAAGGCCTTGCGAGCATCCCTTCAGACGTGAGCC
TTGCGAGCATCCCTTCAGACGTGA
back to top