mRNA_F-serratus_M_contig747.18703.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5JSX7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX7_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.010e-17 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE P F IP+FGGG +R RYP KFK+DAV YS++ V+G +GP G++GI+YA++ LGIRD S++ W ++ EA L
Sbjct: 27 KRKKGQLELEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAAL 111
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5K8J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J2_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 6.260e-17 Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE PDFEIP+FGGG +R RYP +FK++AV YS+K V+G +GPGG++GISYAT+ L I D +++ W + EA L
Sbjct: 142 KRKKGQLELEPPDFEIPNFGGGSQRKRYPLQFKVNAVRYSQKRVKGAQGPGGTVGISYATRVLNIPDKATLAEWVRKVPEYEAAL 226
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5J6V1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6V1_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.520e-16 Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE PDFEIP+FGGG +R RYP +FK++AV YS+K V+G +GPGG++GISYAT+ L I D +++ W + EA L
Sbjct: 142 KRKKGQLELEPPDFEIPNFGGGSQRKRYPLQFKVNAVRYSQKRVKGAQGPGGTVGISYATRVLNIPDKATLAEWVRKVPEYEAAL 226
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.050e-16 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE P F IP+FGGG +R RYP KFK+DAV YS++ V+G +GP G++GI+YA++ LGIRD S++ W ++ EA L
Sbjct: 251 KRKKGQLELEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAAL 335
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5JJ80_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ80_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.910e-16 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE P F IP+FGGG +R RYP KFK+DAV YS++ V+G +GP G++GI+YA++ LGIRD S++ W ++ EA L
Sbjct: 221 KRKKGQLELEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAAL 305
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5JA43_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA43_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 4.020e-16 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
K++ G+ LE P F IP+FGGG +R RYP KFK+DAV YS++ V+G +GP G++GI+YA++ LGIRD S++ W ++ EA L
Sbjct: 251 KRKKGQLELEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAAL 335
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5KLV3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV3_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.470e-15 Identity = 50/136 (36.76%), Postives = 81/136 (59.56%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAELLPVVEVKKRVVTNRKKKEGKVASNRKRPRAAHVKDALSLGRPRTQAGRTRE 765
K++ G+ LE PDF IPD GGG +R RY ++FK++AV YS++ ++G +GPGG++G++YA++ L I D +++ W +D EA L +E K + + R +A H + +L++GR RT RE
Sbjct: 116 KRKKGRLELEPPDFPIPDHGGGTQRKRYTSQFKVNAVRYSQRKLKGAQGPGGTVGVTYASRILKIPDKATLAAWVKDVDKFEAALA---------------EEPKYSRVKGRTKAKH-RMSLNVGRTRTHTDAERE 235
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5JEJ4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ4_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.130e-14 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 358 KQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAELLPVVEVKKRVVTNRKKKEGKVASN 684
K++ G+ LESPDF IPD GGG +R RY +FK++AV YS++ ++G +GPGG++G++YA++ L I D +++ W +D EA L E K V RKK + +++ N
Sbjct: 222 KRKKGRLELESPDFPIPDHGGGTQRKRYTLQFKVNAVRYSQRKLKGAQGPGGTVGVTYASRILKIPDKATLAAWVKDVDKYEAALAE--ETKYSRVKGRKKAKHRMSLN 328
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5KQE0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE0_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 3.140e-14 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 331 TPHHGTKRKKQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAEL 612
TP R+K+ G+ LE PDF IP+ GGG +R +P KFK+DAV YS+K ++G +GPGG++GISYA++ L I + +++ W +D EA L
Sbjct: 20 TPAQNKGRRKK--GQLELEPPDFAIPELGGGRQRKHHPLKFKVDAVRYSQKRLKGAQGPGGTVGISYASRILNIPNKATLAAWVRDVAKYEAAL 111
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Match: A0A6H5K0R7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0R7_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 3.990e-14 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 322 HDATPHHGTKRKKQEHGKFHLESPDFEIPDFGGGVRRNRYPTKFKLDAVAYSEKIVEGGRGPGGSIGISYATKRLGIRDCSSIVRWKQDRRNLEAELLPVVEVKKRVVTNRKKKEGKVASNRKRPRAAHVKDALSLGRPRTQAGRTRE 765
H TP R K++ G+ LE P+F IP+ GGG +R RYP KFK+DAV YS++ ++G +GP G++GI YAT+ L I D +++ W ++ +A L K KR + A+ + +L++GR RT RE
Sbjct: 188 HVGTP--AQNRSKRKKGQLELEPPNFPIPELGGGSQRKRYPLKFKVDAVRYSQRKIKGAQGPNGTVGIIYATRILKIPDKATLAAWFKNVAEYDAALAEADTYK---------------GGAKRKKKANNRLSLNVGRIRTHTAAERE 318 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig747.18703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig747.18703.1 >prot_F-serratus_M_contig747.18703.1 ID=prot_F-serratus_M_contig747.18703.1|Name=mRNA_F-serratus_M_contig747.18703.1|organism=Fucus serratus male|type=polypeptide|length=371bp MNSACERGAVVGESRSSSNGGVGGSAFTIIAASEAASTPSDGVEDGVDDGback to top mRNA from alignment at F-serratus_M_contig747:177113..182426- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig747.18703.1 ID=mRNA_F-serratus_M_contig747.18703.1|Name=mRNA_F-serratus_M_contig747.18703.1|organism=Fucus serratus male|type=mRNA|length=5314bp|location=Sequence derived from alignment at F-serratus_M_contig747:177113..182426- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig747:177113..182426- >mRNA_F-serratus_M_contig747.18703.1 ID=mRNA_F-serratus_M_contig747.18703.1|Name=mRNA_F-serratus_M_contig747.18703.1|organism=Fucus serratus male|type=CDS|length=2226bp|location=Sequence derived from alignment at F-serratus_M_contig747:177113..182426- (Fucus serratus male)back to top |