mRNA_F-serratus_M_contig744.18692.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: D7G1V5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V5_ECTSI) HSP 1 Score: 146 bits (368), Expect = 5.810e-42 Identity = 85/156 (54.49%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 1 MLAASVAVEKSLAELSSPYLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLG-VAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQLDNTG 465
MLAAS V+K + +LK+Q+NRGVGRK ALRKLAK R +KA LA+ AC+ GWE G+ YF V KEC G VAA G E +DVSHAQAGKL+ QA AL+ Y KLL G +R AFE AE L ++V TI+ WE YR GH+ LD G
Sbjct: 1 MLAASQEVDKHEKDWQPAFLKRQSNRGVGRKEALRKLAKHRSQLEKASLASAACKAGWEKGLEYFRAVAKECNGAVAATSAGL--EETIDVSHAQAGKLLTQAQALRAVYSKLLQGVSKRQAFEGSAEFLELAVGTIKQWELEYRTKGHIVLDQGG 154
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5LDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ5_9PHAE) HSP 1 Score: 129 bits (324), Expect = 4.750e-35 Identity = 73/133 (54.89%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKEC-LGVAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQ 450
+LK+Q+NRGVGRK ALRKLAK R +KA A+ ACR GWE G YF V KEC VA G + V VSHAQAG L ++ALALKG Y KLL G +R AFEE AE V+ +T+ WE +YR GH+Q
Sbjct: 19 FLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQFAVAVSSAGLNES--VLVSHAQAGSLQLKALALKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHIQ 149
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.670e-33 Identity = 75/138 (54.35%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLG-VAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQLDNTG 465
+LK+Q+NRGVGRK ALRKLAK R +KA A+ ACR GWE G YF V KEC VAA G + V VSHAQAG L +ALALK Y KLL G P+R AFE+ AE V+ +T+ WE +YR GH+Q+D G
Sbjct: 200 FLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNES--VLVSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHIQMDQKG 335
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 132 bits (333), Expect = 5.330e-33 Identity = 75/138 (54.35%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLG-VAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQLDNTG 465
+LK+Q+NRGVGRK ALRKLAK R +KA A+ ACR GWE G YF V KEC VAA G + V VSHAQAG L +ALALK Y KLL G P+R AFE+ AE V+ +T+ WE +YR GH+Q+D G
Sbjct: 200 FLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNES--VLVSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHIQVDQKG 335
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: D8LEU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU9_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.250e-31 Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLG-VAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHM 447
+LK+Q+NRGV R AL KLA R +KA LA+ A + GWE G+ YF V KEC VAA G D +DVSHAQAGKL+++ALAL+ Y KLL G RR AFE AE + +S TI+ WE YR GH+
Sbjct: 46 FLKRQSNRGVRRTEALGKLANHRSQLEKAALASAARKAGWEKGVEYFRAVVKECQSAVAATSAGLDET--MDVSHAQAGKLLIKALALRAVYSKLLEGVSRREAFEASAEFVEMSEGTIKQWELEYRTKGHI 175
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.120e-29 Identity = 72/147 (48.98%), Postives = 89/147 (60.54%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLGVAAPFVGCDTE----------GPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQLDNTG 465
+LK+Q+NRGVGRK ALRKLAK R +KA +A+ ACR GWE G YF V KEC ++ C T+ V VSHAQAG L +ALALKG Y LL G +R AFEE AE V+ +T WE +YR GH+Q++ G
Sbjct: 206 FLKRQSNRGVGRKEALRKLAKHRSQLEKAAVASAACRSGWEGGQDYFRAVIKECQSCSSHT--CWTQCKRVWATRCSESVLVSHAQAGSLQFKALALKGLYHMLLRGVSKRQAFEETAEFFEVASSTPREWELSYRTKGHIQVNQRG 350
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 118 bits (295), Expect = 6.600e-28 Identity = 66/137 (48.18%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 55 YLKQQANRGVGRKSALRKLAKKRLIWDKAILAARACREGWENGIAYFDGVQKECLGVAAPFVGCDTEGPVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHMQLDNTG 465
+LK+Q+NRG+GRK ALRKLAK + K A+ ACR GWE G V KEC A V VSH+QAG L +ALA KG Y KLL G +R AFEE AE V+ +T+ WE +YR GH+Q+D G
Sbjct: 119 FLKRQSNRGLGRKEALRKLAKHQSQLQKEAAASAACRSGWERGQGCLRAVIKECQSAIA-VTSAGLNESVLVSHSQAGSLQFKALARKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHIQVDQRG 254
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.910e-13 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 259 PVDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWERAYRITGHM 447
P+DVSHAQAGKL+ +A AL+G Y KLL G +R AFEE AE L VSV TI+ WE YR G +
Sbjct: 6 PIDVSHAQAGKLLTKAHALRGVYSKLLKGVSKRQAFEESAEFLQVSVGTIKQWELEYRTKGRI 68
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Match: A0A6H5KM80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM80_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.070e-8 Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 262 VDVSHAQAGKLMVQALALKGTYKKLLHGWPRRTAFEEMAELLGVSVTTIETWE 420
+DVSHAQAGKL+++ALAL+ KLL G RR AFE AE + +S TI+ WE
Sbjct: 1 MDVSHAQAGKLLIKALALRAVSTKLLKGVSRREAFEASAEFIEMSEGTIKQWE 53 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig744.18692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig744.18692.1 >prot_F-serratus_M_contig744.18692.1 ID=prot_F-serratus_M_contig744.18692.1|Name=mRNA_F-serratus_M_contig744.18692.1|organism=Fucus serratus male|type=polypeptide|length=155bp MLAASVAVEKSLAELSSPYLKQQANRGVGRKSALRKLAKKRLIWDKAILAback to top mRNA from alignment at F-serratus_M_contig744:297303..297767- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig744.18692.1 ID=mRNA_F-serratus_M_contig744.18692.1|Name=mRNA_F-serratus_M_contig744.18692.1|organism=Fucus serratus male|type=mRNA|length=465bp|location=Sequence derived from alignment at F-serratus_M_contig744:297303..297767- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig744:297303..297767- >mRNA_F-serratus_M_contig744.18692.1 ID=mRNA_F-serratus_M_contig744.18692.1|Name=mRNA_F-serratus_M_contig744.18692.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig744:297303..297767- (Fucus serratus male)back to top |