mRNA_F-serratus_M_contig741.18671.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig741.18671.1
Unique NamemRNA_F-serratus_M_contig741.18671.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: D8LJ40_ECTSI (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ40_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 3.720e-87
Identity = 137/178 (76.97%), Postives = 151/178 (84.83%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADL-VEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTPETNGCPR 593
            +H P    + GERGVKH TSRRI +IKHEVD +GKP  VNGLV+ GGG     +Y+EFD+V+AATDVPGIKKLLPENFRK+EMFDNIYKLDGVPVAT+QLRFDGWVTELND DKR DV SDYS G+APGLDNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTP     PR
Sbjct:  318 IHQPILKYL-GERGVKHHTSRRILDIKHEVDADGKPTHVNGLVVTGGGGGKDQQYKEFDLVIAATDVPGIKKLLPENFRKYEMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPR 494
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A6H5JB95_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB95_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 5.750e-87
Identity = 137/178 (76.97%), Postives = 151/178 (84.83%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADL-VEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTPETNGCPR 593
            +H P    + GERGVKH TSRRI +IKHEVD +GKP  VNGLV+ GGG     +Y+EFDVV+AATDVPGIKKLLPENFRK++MFDNIYKLDGVPVAT+QLRFDGWVTELND DKR DV SDYS G+APGLDNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTP     PR
Sbjct:  336 IHQPILKYL-GERGVKHHTSRRILDIKHEVDADGKPTHVNGLVVTGGGGGKDQQYKEFDVVIAATDVPGIKKLLPENFRKYDMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPR 512
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A4D6NXF4_UNDPI (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A4D6NXF4_UNDPI)

HSP 1 Score: 276 bits (706), Expect = 3.700e-85
Identity = 134/177 (75.71%), Postives = 149/177 (84.18%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTPETNGCPR 593
            +H P    +  ERGV H TSRRITEI+HEVD +GKP  VNGLVI GGG +  EYRE+DVV+AATDVPGIKKLLPENFRK++MFDNIYKLDGVPVAT+QLRFDGWVTELND +K KDV  DY  GRAPG+DNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTP     P+
Sbjct:  324 IHQPILKYL-AERGVTHQTSRRITEIRHEVDADGKPTHVNGLVIAGGGTEE-EYREYDVVIAATDVPGIKKLLPENFRKYDMFDNIYKLDGVPVATVQLRFDGWVTELNDAEKMKDVAGDYGQGRAPGMDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPK 498
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BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A836CNI7_9STRA (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI7_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.400e-73
Identity = 121/171 (70.76%), Postives = 139/171 (81.29%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRK-HEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTP 572
            +H P    +  +R V+  T+RRI +I H+ D +G+P RV GLVI GGG    E REFDVVVAATDVPGIKKLLP  FR+ +  FD IY LDGVPVAT+QLRFDGWVTELND ++RKDV SDYSAGRAPGLDNLLY+ADAEFSCFADLALTSPSSNYY+ G+G+LLQCVMTP
Sbjct:  317 IHTPILKYL-ADRNVQVHTNRRIADITHDTDAQGRPTRVRGLVITGGGGGREEAREFDVVVAATDVPGIKKLLPRAFREGYGFFDRIYNLDGVPVATVQLRFDGWVTELNDAERRKDVASDYSAGRAPGLDNLLYSADAEFSCFADLALTSPSSNYYQAGKGSLLQCVMTP 486
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BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: L1JLR2_GUITC (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JLR2_GUITC)

HSP 1 Score: 216 bits (550), Expect = 6.990e-63
Identity = 103/159 (64.78%), Postives = 127/159 (79.87%), Query Frame = 3 
Query:   96 ERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTP 572
            ERGVK + + R+ +I HEVD +GKP  V G+ +   G + V+ + FDVVV A DVPGIKKLLPE+FRKH+MFD IYKL+GVPVAT+QLRFDGW+TE+ D +  K +  D S G+APG+DNLLY+AD EFSCFADLALTSP+  YYKEGEG+LLQCV+TP
Sbjct:  251 ERGVKFNLNSRVEDIMHEVDAQGKPTFVKGIEVALDGGEPVK-KNFDVVVCAQDVPGIKKLLPESFRKHDMFDRIYKLEGVPVATVQLRFDGWITEMQDKEAMKKINEDLSDGKAPGIDNLLYSADVEFSCFADLALTSPAE-YYKEGEGSLLQCVLTP 407
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A7S0VWE6_9CRYP (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VWE6_9CRYP)

HSP 1 Score: 212 bits (540), Expect = 1.270e-60
Identity = 107/176 (60.80%), Postives = 131/176 (74.43%), Query Frame = 3 
Query:   45 GGLTRRLHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTP 572
            G     +H P    +  ER VK + + ++ EI H  D +GKP  V G+ +   G + VE ++FDV+V A DVPGIKKLLPE+FRKH+MFD IY L GVPVAT+QLRFDGWVTEL D    K+VKS++S G+APGLDNLLY+ADAEFSCFADLALTSP+  YYK GEG+LLQCV+TP
Sbjct:  324 GSPNTYVHEPIVKYLK-ERDVKINLNSKVVEIMHTCDADGKPSEVQGISVEQDGGEAVE-KKFDVLVCAQDVPGIKKLLPESFRKHDMFDKIYTLVGVPVATVQLRFDGWVTELEDMAALKNVKSEFSDGKAPGLDNLLYSADAEFSCFADLALTSPAE-YYKPGEGSLLQCVLTP 496
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A7S3BNV3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BNV3_9EUKA)

HSP 1 Score: 198 bits (504), Expect = 8.970e-58
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCV 563
            LH P    +  +R VK +    + ++ HEVD EGKP RV+G+ +  G A+    +EFDVVVAA DVPGIKK+LPENFRK+ MFDNIY L+ VP+AT+QLRFDGWVTE+   ++  DV  D S GRA G+DNLLY+ADAEFSCFADLALTSP+ +YYK+GEG+L+Q V
Sbjct:   81 LHDPIIKYLE-DRNVKINLRTPVRDLVHEVDAEGKPTRVSGIKV--GSANGEVTKEFDVVVAAVDVPGIKKMLPENFRKYPMFDNIYNLECVPIATVQLRFDGWVTEMQSVERMMDVAGDQSDGRAGGIDNLLYSADAEFSCFADLALTSPA-DYYKKGEGSLMQAV 243
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A7S0I513_9EUKA (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I513_9EUKA)

HSP 1 Score: 204 bits (518), Expect = 1.290e-57
Identity = 105/167 (62.87%), Postives = 125/167 (74.85%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCV 563
            LH P  + +  ERG K      I ++ HEVD EGKP RV G+V    GAD  E REFD VVAA DVPGIKK+LPE+FRK+ MFDNIY L+ VP+AT+QLRF+GWVTE+ND  K  D   D S GRA G+DNLLY+ADAEFSCFAD+ALTSP+ +YYKEGEG+L+Q V
Sbjct:  311 LHDPIVSYLE-ERGAKLHLRTPIRDLVHEVDAEGKPTRVTGIV---AGADK-EVREFDAVVAAVDVPGIKKMLPESFRKYPMFDNIYNLECVPIATVQLRFNGWVTEMNDDKKMMDTSGDQSDGRAAGIDNLLYSADAEFSCFADMALTSPA-DYYKEGEGSLMQAV 471
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A8J5XB03_DIALT (Zeta-carotene desaturase, chloroplastic/chromoplastic n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XB03_DIALT)

HSP 1 Score: 203 bits (517), Expect = 1.810e-57
Identity = 105/178 (58.99%), Postives = 131/178 (73.60%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRGGGADLVEYREFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATIQLRFDGWVTELNDPDK--------RKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTP 572
            LH P    +  +RGVK +   R+ +I H+VD  G P RV+G+ +  G     E+R FDV +AATDVPGIK LLP+NFRK + FD +Y+L+GVPVAT+QLRFDGWVTEL D D+         KDV SD + GRAPG+DNLLY+ADA+FSCFADLALTSP+ +YYK GEG+LLQCV+TP
Sbjct:  298 LHKPIVKYLT-DRGVKINLKSRVLDILHDVDANGAPTRVHGICVVDGNDVQSEHR-FDVTIAATDVPGIKGLLPDNFRKLDFFDKVYQLEGVPVATVQLRFDGWVTELADMDRWGMTSRGAPKDVGSDRADGRAPGIDNLLYSADADFSCFADLALTSPA-DYYKPGEGSLLQCVLTP 472
[Close]
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Match: A0A0K6SAL9_9ALVE (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Chromera velia TaxID=505693 RepID=A0A0K6SAL9_9ALVE)

HSP 1 Score: 202 bits (515), Expect = 3.290e-57
Identity = 105/173 (60.69%), Postives = 129/173 (74.57%), Query Frame = 3 
Query:   63 LHPPAYTQVPGERGVKHSTSRRITEIKHEVDDEGKPIRVNGLVIRG--GGADLVEYREFDVVVAATDVPGIKKLLPENFRKH-EMFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTP 572
            LH P    +  ERG +  T RR+ +  ++ D+ GKP +V GLV+ G  G     E REFD V+AATDVPGIK LLPE+F++H +   N  +L GVPVAT+QLRFDGWVTELND  K KDV  D S G+APG+DNLLY+ADAEFSCFADLALTSP+ +YYKEG+G+LLQCV+TP
Sbjct:  300 LHAPIQKYIE-ERGGQVLTRRRVLDFIYDQDESGKPTKVRGLVVTGDPGAGRQDERREFDAVLAATDVPGIKALLPESFKRHYQELANCMRLVGVPVATVQLRFDGWVTELNDEVKMKDVGGDKSDGKAPGIDNLLYSADAEFSCFADLALTSPA-DYYKEGQGSLLQCVLTP 470
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig741.18671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ40_ECTSI3.720e-8776.97Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A6H5JB95_9PHAE5.750e-8776.97Amino_oxidase domain-containing protein n=1 Tax=Ec... [more]
A0A4D6NXF4_UNDPI3.700e-8575.71Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A836CNI7_9STRA3.400e-7370.76Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
L1JLR2_GUITC6.990e-6364.78Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A7S0VWE6_9CRYP1.270e-6060.80Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A7S3BNV3_9EUKA8.970e-5859.88Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0I513_9EUKA1.290e-5762.87Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A8J5XB03_DIALT1.810e-5758.99Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
A0A0K6SAL9_9ALVE3.290e-5760.69Zeta-carotene desaturase, chloroplastic/chromoplas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig741contigF-serratus_M_contig741:22059..24333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.9
Seed ortholog evalue8.7e-41
Seed eggNOG ortholog2880.D8LJ40
Preferred nameZDS
KEGG rclassRC01214,RC01959
KEGG koko:K00514
KEGG ReactionR04798,R04800,R07511,R09656,R09658
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009509,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016119,GO:0016120,GO:0016491,GO:0016627,GO:0016635,GO:0031967,GO:0031975,GO:0042214,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046246,GO:0052886,GO:0052889,GO:0055114,GO:0071704,GO:1901175,GO:1901177,GO:1901576
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG1231@1,KOG0029@2759
Ec32 ortholog descriptionzeta-carotene desaturase, chloroplast precursor
Ec32 orthologEc-02_004660.1
EC1.3.5.6
COG Functional cat.E
BiGG ReactioniRC1080.CRv4_Au5_s7_g13718_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size910
Cds size357
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig741.18671.1prot_F-serratus_M_contig741.18671.1Fucus serratus malepolypeptideF-serratus_M_contig741 23011..23898 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932246.8681765-UTR-F-serratus_M_contig741:22058..222001622932246.8681765-UTR-F-serratus_M_contig741:22058..22200Fucus serratus maleUTRF-serratus_M_contig741 22059..22200 +
1690964216.6968617-UTR-F-serratus_M_contig741:22058..222001690964216.6968617-UTR-F-serratus_M_contig741:22058..22200Fucus serratus maleUTRF-serratus_M_contig741 22059..22200 +
1622932246.8901393-UTR-F-serratus_M_contig741:22523..226791622932246.8901393-UTR-F-serratus_M_contig741:22523..22679Fucus serratus maleUTRF-serratus_M_contig741 22524..22679 +
1690964216.7120829-UTR-F-serratus_M_contig741:22523..226791690964216.7120829-UTR-F-serratus_M_contig741:22523..22679Fucus serratus maleUTRF-serratus_M_contig741 22524..22679 +
1622932246.9111192-UTR-F-serratus_M_contig741:23003..230101622932246.9111192-UTR-F-serratus_M_contig741:23003..23010Fucus serratus maleUTRF-serratus_M_contig741 23004..23010 +
1690964216.721909-UTR-F-serratus_M_contig741:23003..230101690964216.721909-UTR-F-serratus_M_contig741:23003..23010Fucus serratus maleUTRF-serratus_M_contig741 23004..23010 +
1622932247.008261-UTR-F-serratus_M_contig741:23898..240291622932247.008261-UTR-F-serratus_M_contig741:23898..24029Fucus serratus maleUTRF-serratus_M_contig741 23899..24029 +
1690964216.7736003-UTR-F-serratus_M_contig741:23898..240291690964216.7736003-UTR-F-serratus_M_contig741:23898..24029Fucus serratus maleUTRF-serratus_M_contig741 23899..24029 +
1622932247.0259426-UTR-F-serratus_M_contig741:24216..243331622932247.0259426-UTR-F-serratus_M_contig741:24216..24333Fucus serratus maleUTRF-serratus_M_contig741 24217..24333 +
1690964216.7889931-UTR-F-serratus_M_contig741:24216..243331690964216.7889931-UTR-F-serratus_M_contig741:24216..24333Fucus serratus maleUTRF-serratus_M_contig741 24217..24333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932246.9294188-CDS-F-serratus_M_contig741:23010..232471622932246.9294188-CDS-F-serratus_M_contig741:23010..23247Fucus serratus maleCDSF-serratus_M_contig741 23011..23247 +
1690964216.7372947-CDS-F-serratus_M_contig741:23010..232471690964216.7372947-CDS-F-serratus_M_contig741:23010..23247Fucus serratus maleCDSF-serratus_M_contig741 23011..23247 +
1622932246.9626715-CDS-F-serratus_M_contig741:23568..236541622932246.9626715-CDS-F-serratus_M_contig741:23568..23654Fucus serratus maleCDSF-serratus_M_contig741 23569..23654 +
1690964216.7518508-CDS-F-serratus_M_contig741:23568..236541690964216.7518508-CDS-F-serratus_M_contig741:23568..23654Fucus serratus maleCDSF-serratus_M_contig741 23569..23654 +
1622932246.9789233-CDS-F-serratus_M_contig741:23864..238981622932246.9789233-CDS-F-serratus_M_contig741:23864..23898Fucus serratus maleCDSF-serratus_M_contig741 23865..23898 +
1690964216.7624235-CDS-F-serratus_M_contig741:23864..238981690964216.7624235-CDS-F-serratus_M_contig741:23864..23898Fucus serratus maleCDSF-serratus_M_contig741 23865..23898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig741.18671.1

>prot_F-serratus_M_contig741.18671.1 ID=prot_F-serratus_M_contig741.18671.1|Name=mRNA_F-serratus_M_contig741.18671.1|organism=Fucus serratus male|type=polypeptide|length=119bp
MFDNIYKLDGVPVATIQLRFDGWVTELNDPDKRKDVKSDYSAGRAPGLDN
LLYTADAEFSCFADLALTSPSSNYYKEGEGTLLQCVMTPETNGCPRPQKP
SPLHASSRCWSSSRPLAS*
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mRNA from alignment at F-serratus_M_contig741:22059..24333+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig741.18671.1 ID=mRNA_F-serratus_M_contig741.18671.1|Name=mRNA_F-serratus_M_contig741.18671.1|organism=Fucus serratus male|type=mRNA|length=2275bp|location=Sequence derived from alignment at F-serratus_M_contig741:22059..24333+ (Fucus serratus male)
CAGCTGTTCGCCATTCGCTCCGAAGCTTCTGTGCTGCGGATGCTGGAGGG
CTCACCCGACGACTTCATCCACCAGCCTATACTCAAGTACCTGGGGAGCG
AGGCGTCAAGCATTCCACCTCACGTCGTATCACTGAGATCAAGTGCGAGT
CTCGCGCGGGTTGCGTAGTGGTGGTGGGAGGGGGGGGGGAATTGGGGGTT
GGGGGTGATAAGAGCGGGCGCGCGCGATCACGATAGAACGCCTCAAGTAT
AGTAACGGTTTGCTCCTAGCTCCTGCCGCTCGTCCGCGCACGCGCGCGAC
TTCCATCGACGCCCACCTTTGGCTGCCTCTGTTTATGCTGCTGCTGCTGC
TATGACTTAAATCAATGCGAAGTATTATTTTCATGGAACTCCTTCTCTCG
CGCCGTGGATAAAATCTACTGCTCTGGGCTTCGGCGTGCGCCTATTGTGC
GTGCGCTCGCTCCAGGCACGAGGTAGACGACGAAGGCAAGCCGATCAGGG
TGAACGGTCTCGTGATCAGGGGAGGAGGGGCCGACTTGGTGGAGTACAGA
GAGTTCGACGTCGTCGTCGCCGCGACAGACGTTCCGGGCATCAAGAAGCT
CCTTCCCGAGAACTTCCGAAAGTGAGTGCAGTTGAAACCTTCTGCTGGGC
TGAGCTGACGAGCCGTGGTTGGGGATGTGTTGGAGGCACGCGTTAGCGCT
CGCAAGGAAATGAGGACGGCTACAGATGCTGTCGGAGGGGTAGGGAGTCT
GCATGCGATAAAGTCGAAATGAGTAGAGGACGGGCCATGAAGGGGACCCT
TCACGAGAGGGCAAGTGAGTTCGAGAAGGTTGACGATATTAGATGAGATG
GGATATATTTCCTTCGTGGCGGCGGAAACGATAGCCCCGCTCCGTTCTGA
TCAGAAGCATGGCATGTCATCCTCCCCCGCGTTGGGGAACCCCAGGCACG
AGATGTTCGACAACATCTACAAGCTCGACGGAGTCCCTGTGGCGACCATT
CAGCTGAGGTTCGACGGCTGGGTGACCGAGCTGAACGATCCGGATAAGAG
GAAGGACGTAAAGTCGGACTATTCCGCGGGGCGGGCGCCGGGCTTGGACA
ATCTCCTGTACACAGCTGACGCGGAGTTCTCGTGCTTCGCAGACCTTGCT
CTCACCAGCCCCAGCTCGAACTACTACAAAGAGGGAGAGGTGAGGAGGGC
GGGGCGTCCCAGAGCCGTCTAGGCTGTGGTAATGTGGTGTTGGAATCGTA
CGTATTACTCCAACTGCAGATTTTCGGGTGTACTGTACAAGGGCTGCTTG
AGGATGACTGACCAATAAACGTGGCCGCAGGGGTCCCGGCGCCGTCTCCG
GAAAAGAGCTCACGCCTTTGATGGCTCATCTGCTGTGCTGTTTCTCCATC
GTTAACCTCTCGTGTTGAGTGAAAATCCTGTCCTAATTTTAGTCAGCCAA
GCCCCCCCCCCCCCCGCACCACCATCACCTCCCGGCATGTCTGACTCCTT
CTGTGTGCAGGGTACTCTGTTGCAGTGCGTTATGACCCCGGAGACAAATG
GATGCCCAAGACCACAGAAGCCATCGCCGCTGCATGCCTCGAGCAGGTGA
GTCTCACGTGGTGGAGTGGAGGCTCTAGAGTTTCAGATGGGCTCGCCAGC
CGCAGCGAGCGACCGTTGATCGCCTGTTGTCTCGTCATCTGTCGAAGTAA
TGTAATCATCCCTTACCCCGGTCTGCTCAAACTGTAAGCAAGAAGCGTCG
TTGTGCTTGACAGTGACAGTAACAGTGACAGTGACCATTTCTAATGCTTG
CCGAAGGTGCTGGAGCTCTTCCCGTCCGCTCGCGAGCTGAACTGCACGTG
GAGCAACGTGGTAAAGCTTGCGGAGTCTCTCTACCGCGAGGGCCGGGGGC
TCGATCAGTACCGACCGAGCCAGAGAACGCCCGTCCCCAATTTCTTTATG
GCGGGCTCGTACACGTACCAGGTAACGCTCGACTTCTGCTGAAACGAGCA
GAAATAGTCGAGAAACGCCATTTCATTATAATAGGGACCATCCGCGTTGG
TAATAATATGTCGCGCCTGCCCGTCCCTTGATACCATTCAGCTTCTAATG
AAAGCCTTCGCTTCCCCCCTTCTTTGGGCGCGTATTTTTACGTACGTATC
GCCGGTAGGACTACATTGACTCCATGGAAGGGGCAACCAAGTCCGCGCTC
CTCTGCGCCGACCGCGTCCTAGAGGACACGCCCGCGCTCGCAAAGGCATC
GAAGGAGCGACAAGCTGCTCTCGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig741:22059..24333+

>mRNA_F-serratus_M_contig741.18671.1 ID=mRNA_F-serratus_M_contig741.18671.1|Name=mRNA_F-serratus_M_contig741.18671.1|organism=Fucus serratus male|type=CDS|length=714bp|location=Sequence derived from alignment at F-serratus_M_contig741:22059..24333+ (Fucus serratus male)
ATGTTCGACAACATCTACAAGCTCGACGGAGTCCCTGTGGCGACCATTCA
GCTGAGGTTCGACGGCTGGGTGACCGAGCTGAACGATCCGGATAAGAGGA
AGGACGTAAAGTCGGACTATTCCGCGGGGCGGGCGCCGGGCTTGGACAAT
CTCCTGTACACAGCTGACGCGGAGTTCTCGTGCTTCGCAGACCTTGCTCT
CACCAGCCCCAGCTCGAACTACTACAAAGAGGGAGAGATGTTCGACAACA
TCTACAAGCTCGACGGAGTCCCTGTGGCGACCATTCAGCTGAGGTTCGAC
GGCTGGGTGACCGAGCTGAACGATCCGGATAAGAGGAAGGACGTAAAGTC
GGACTATTCCGCGGGGCGGGCGCCGGGCTTGGACAATCTCCTGTACACAG
CTGACGCGGAGTTCTCGTGCTTCGCAGACCTTGCTCTCACCAGCCCCAGC
TCGAACTACTACAAAGAGGGAGAGGGTACTCTGTTGCAGTGCGTTATGAC
CCCGGAGACAAATGGATGCCCAAGACCACAGAAGCCATCGCCGCTGCATG
CCTCGAGCAGGGTACTCTGTTGCAGTGCGTTATGACCCCGGAGACAAATG
GATGCCCAAGACCACAGAAGCCATCGCCGCTGCATGCCTCGAGCAGGTGC
TGGAGCTCTTCCCGTCCGCTCGCGAGCTGAGTGCTGGAGCTCTTCCCGTC
CGCTCGCGAGCTGA
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