mRNA_F-serratus_M_contig7405.18668.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7405.18668.1 vs. uniprot
Match: D7FYN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYN2_ECTSI) HSP 1 Score: 268 bits (685), Expect = 8.700e-71 Identity = 304/910 (33.41%), Postives = 426/910 (46.81%), Query Frame = 1
Query: 1 LSSDVRGLEARLSEATGSARQREALVEQQHVACDSSNEKAGDLERRLVALQAELDAYLSLSCAPCIPGSVG----TASPKAQ-----CADMLFG---------APTVNNGVTGSLGASAAPGATTTAEAEQLQAHAEAMELELRYTLEAFEGQLSSMAREKLAIRKQVKELIGQRVTLRKQVCHYREAAKENEAQVEQQMLELQQQLCDAEDAAGRLRGVNSDLASKIEALEVGAVNAAQWKQSQLRARLAEVEEVGEASSKDLSSKAQEVIAAKARIGELEKRIQEADLQLLSLEEV----------------------------------------------------SAATAAELSSSLVKTRQLEXXXXXXXXXXXXXXXLEDEKHILQE---ALATATGGADE---------------AQQKCNEMEVAIFSLQEEKDRALHSLEQADESGARLVAQIAASVKLEDEKNKLQEALATATGGADEAQRKCSEMEVAIFSLQEEKDRALHSLEQADESGARLVAQIAASVKLEDEKTSCKRRSQRPLAELTKRNRKEKDRALNSLQQADERGARLVAQM---AQMAEVALQQTRAEGEAARETLRKERLMMMTFRRWGHFYLALSNDALRKRTKDRNQARRQRHIHEEGPRTM-KAPQDYQGRSRRRPGERANPVALSCETMQAMLEEEVENVVRELTHEPSPSLVALSDARKDMDDMAMRAQTTLNMLFVQPAVMPSTMSTEAAPAVGRISLEPEQREDALVTGASPSERRDGLQSVGVLPAPA-MSEKAVPSMPMVSASPAPMTPPLAAQVPPVAAAVDSSGTAEGIRTPPPVANRGRTTTGLLVEDGISRAERSEFLRRQREERQANRKKGLHSYAAARSNSSTPAARRASGIGAVSPAASSAP 2451
L+ DVR L+A+LSEA SA EA +E+Q A + S+ K LE+R +A++ D + A G+ G A+P + CA++LFG APT ++ AP +T AEAEQLQAHAEAMELELR+T E+F+ QLS+MAREK+AI+KQVKE+ GQ TLRKQV HY++ AKE EA + +++EL RARL E + S++L++K QE +++A LE R + A+A++L S+L K +LE LE EK L E ALA+ A Q +E E A +L R + L + SG +V+ + + K+ + K +L A A R E EVA+ SG + + TS +RR Q +EL++R + D L Q +ER V + M EVAL+Q + E E + TLRKERL+M+ FRRWGHFYLALSN+AL+KRTK++NQAR +R E P +M + ++ GRSRRR G R P+ L+ ++ M+E+E V REL P+ SL+AL DARKDMDD++M+AQ TL +L+ QP + + + +I P + +AL SP + ++ V A A +SE+A+P P AP+ P ++ Q A A D +G + PP GRTT G LVEDG+S+ ER+EFL+RQREER+ NRKKG+ A S S+ RR S ++PAA AP
Sbjct: 626 LTEDVRALKAQLSEARASATHLEAEIEEQRGALEMSSLKVNQLEKRAIAVERARDEEAPETAASATVGAPGPLPVVAAPVFRVNGDTCANVLFGVTAPANNGNAPTGGKEQASAIANGVAP-CSTGAEAEQLQAHAEAMELELRFTWESFQRQLSAMAREKVAIQKQVKEVTGQCTTLRKQVSHYKKVAKEREATEQHEVIEL-------------------------------------------RARLEEAQRTLVEMSQELAAKTQETDSSRALANTLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALASASKLQSALSKVSELESVVRG----------LEGEKLHLNETTEALASRASAKXXXXXXXXXXXXXXXXIASQTFDEAEGARATLMMTL-RDIAELVGCERSGEAVVSSLRIADKITEVKQQLATAEDVLEATAQALLRTAVEGEVALG------------------SGWSWITRGV---------TSLQRRMQVAESELSRRAVAQDDGGLRDRAQTEERSTSAVVECNGNTVMHEVALRQAKEEVETVKATLRKERLLMVAFRRWGHFYLALSNEALKKRTKEKNQARSRRAKPEITPSSMMEQTRNDTGRSRRRGGGR-EPLQLTSSEVRLMVEKEAVTVARELAGAPTASLLALVDARKDMDDVSMKAQATLGVLYSQPPLTQDADVAKDGSMMRKIERLPHEEGEALNALPSPGRQMRASANISVEAAGANLSEEALPEPPT-----APIVP-ISQQESEAAQAADLAGVTRALNNAPP----GRTT-GPLVEDGVSKKERAEFLKRQREERKLNRKKGMQ----ASSGSAGFRNRRTSAPATMTPAAVDAP 1437
BLAST of mRNA_F-serratus_M_contig7405.18668.1 vs. uniprot
Match: D7FPQ8_ECTSI (Kinesin K39 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ8_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.470e-56 Identity = 339/1161 (29.20%), Postives = 468/1161 (40.31%), Query Frame = 1
Query: 1 LSSDVRGLEARLSEATGSARQREALVEQQHVACDSSNEKAGDLERRLVAL---QAELDAYLSLSCAPCIPGSVGTASPKAQ-----CADMLFGAPTVNNGVTGSLG-------ASAAPGATTTAEAEQLQAHAEAMELELRYTLEAFEGQLSSMAREKLAIRKQVKELIGQRVTLRKQVCHYREAAKENEAQVEQQMLELQQQLCDAEDAAGRLRGVNSDLASKIEALEVGAVNAAQWKQSQLRARLAEVEEVGEASSKDLSSKAQEVIAAKARIGELEKRIQEADLQLLSLEEV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAATAAELSSSLVKTRQLEXXXXXXXXXXXXXXXLEDEKHILQEALATATGGADEAQQKCNEMEVAIFSLQEEKDRALHSLEQADESGARLVAQIAASVKLEDEKNKLQEALATATGGADEAQRKCSEMEVAIFSLQEE---KDRALHSLEQADESGARLVAQIAASVKLEDEK---------TSCKRRSQRPLAELTKRNRKEKDRALNSLQQADERGARLVAQMA--QMAEVALQQTRAEGEAARETLRKERLMMMTFRRWGHFYLALSNDALRKRTKDRNQARRQRHIHEEGPRTMKAPQDYQGRSRRRPGERANPVALSCETMQAMLEEEVENVVRELTHEPSPSLVALSDARKDMDDMAMRAQTTLNMLFVQPAVMPSTMSTEAAPAVGRISLEPEQ--REDAL-------------------------------VTGASPSERRDGLQSVGVLPAPAMSEKAVPSMPMVSASPAPMTPPLAAQVPPVAAAVDSSGTAEGIRTPPPVANRGRTTTGLLVEDGISRAERSEFLRRQREERQANRKKGLHSYAAARSNSSTPAARRASGIGAVSPAASSAPMTLPLAA----HVPRWPPP*T-TADLPRA-PEPHLPPRHRRKSNEMT---LLLRTHALPSGVMVFD---------------LRGCSRASREGTPPLMFNPAAVP 2691
L +DVR LEA+L EA SA Q EA++E+ S N A LE R +A+ + E A A+P CAD+LFG+P + S G A+ + +AEAEQLQAHA+AMELELRYTLE+FEGQLS+MAREK+AI+KQVKEL GQ TLRKQV HY++ AKE+EAQ EQ E +E LRARL E E++ S++L++KAQE ++A A LE RIQEAD ++L L E + A+A++L +L K +L+ LE EK L E A T +A K E++ I S QEEK AL +++Q +E+ LV V L D + E + G D + E V+ S+ ++ R L + E E+ A+ + Q A ++ + +S +RR Q EL++ + D L Q E A +V + + AL+Q + E E + TLRKERL+M+ FRRWGHFYLALSN+ALRKRTK++NQAR Q+ E ++ S ++ M+E+E E V REL P+ SL+AL DARK+MDD+AM+AQ TL +L+ QP P T A G + LE EQ E+ L SPS R SV + + E+A+P P+ T P+ Q A A DS+G+ ++ P TTG LVEDG+S+ +R+E+L++QREER+ANRKKG+ + + +R+ S+ P G A +SAP +P AA PR PP DL +A P+P + R +S M + L P+G + L G + A PP MFNP AVP
Sbjct: 683 LINDVRALEAQLCEAKASATQLEAVIEEHQEKLSSLN--ANQLEERTIAVARAREEWAAEAXXXXXXXXXXXXVVAAPVLSVNGDTCADVLFGSPAPGSNGDASTGGKEASAMANGVAAVSRSAEAEQLQAHADAMELELRYTLESFEGQLSAMAREKVAIQKQVKELTGQCTTLRKQVSHYKKVAKESEAQGEQD-----------------------------EVIE-------------LRARLVEAEDILVVKSQELAAKAQEAVSATALANALEHRIQEADSEVLGLRESLESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASARASASDLQCALSKISELQSVVGD----------LEREKIHLNETTAALTSEFGQASAKLLELQDVIHSQQEEKAIALQTVDQTEEARTALV------VALRD----IAELI-----GCD----RVGEAAVSSLSILDKIAVVKRQLATAEDVLEATAQALRQTAVEGEVALDSGWSWIINGVSSLQRRLQAAELELSRSAVVQDDGGLGDTAQVVE-SASVVGECNGNSVTHEALRQAKEEVETVKATLRKERLLMLAFRRWGHFYLALSNEALRKRTKEQNQARIQKGKPESASSSVMEQTXXXXXXXXXXXXXXXXXXXSTSEVRLMVEKEAETVARELAGAPTASLLALVDARKEMDDVAMKAQATLGVLYAQP---PLTQDANVA-TDGTMMLEIEQLPHEENLKGEIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPSPGRQTSASVDMNVDAGVGEEALPGPPIAP------TVPIDQQKAEAAKATDSTGS-RVLKNAPSC-----RTTGPLVEDGVSKKDRAEYLKKQREERKANRKKGMQA-STSRTRSAEPP-----GSAAFRNRRTSAPAMMPTAAVNAPAAPRTPPTLHGETDLFQASPKPAIEDREESESKRMPPPPMGLTAGVSPTGAALVGEDQQGGGPSPRSDSTLTGETMAPVRAPPPRMFNPTAVP 1747 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7405.18668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7405.18668.1 >prot_F-serratus_M_contig7405.18668.1 ID=prot_F-serratus_M_contig7405.18668.1|Name=mRNA_F-serratus_M_contig7405.18668.1|organism=Fucus serratus male|type=polypeptide|length=752bp MLFGAPTVNNGVTGSLGASAAPGATTTAEAEQLQAHAEAMELELRYTLEAback to top mRNA from alignment at F-serratus_M_contig7405:1173..9904- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7405.18668.1 ID=mRNA_F-serratus_M_contig7405.18668.1|Name=mRNA_F-serratus_M_contig7405.18668.1|organism=Fucus serratus male|type=mRNA|length=8732bp|location=Sequence derived from alignment at F-serratus_M_contig7405:1173..9904- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7405:1173..9904- >mRNA_F-serratus_M_contig7405.18668.1 ID=mRNA_F-serratus_M_contig7405.18668.1|Name=mRNA_F-serratus_M_contig7405.18668.1|organism=Fucus serratus male|type=CDS|length=4512bp|location=Sequence derived from alignment at F-serratus_M_contig7405:1173..9904- (Fucus serratus male)back to top |