mRNA_F-serratus_M_contig740.18666.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig740.18666.1
Unique NamemRNA_F-serratus_M_contig740.18666.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 1098 bits (2841), Expect = 0.000e+0
Identity = 583/989 (58.95%), Postives = 713/989 (72.09%), Query Frame = 2
Query:  350 LDPLGEVIRILRYVMRSEESKPFLGTPTDADINPEG---------------------VVTGHQPRRPLDLGTILERAENGWYDMDPRSQPPVTSNSFGAGHAGVAQDVELVQEGWLEARGRDSVIYEQARALVDDFMALYEAHVLKPLAHLERNDRGGKCPATKDGKDGDGNRESFGRSLSPPKLDS-------------MEMLRKMGSEEYARWSPAAKSRALAMLCDEAMGSGTLSDVARKVFEAREMVDRKDREMKAAVKDVIRGQQERGPQRLQAPTSTSRRGTEAEMVAARVAAEGPEFRTIRQLGHLRVRLKPLGTDRYRRRYWLLARGEDHRVFTQLDDEWGCYERVSQLKALLAWLDRRGTRERVLKAAIREHLTVNLGVSTDDLYPPSRP--------SRTDWNTGKGSK-------CYEEDRQEYIGEPAGVAREKERERAAGKEALKSCGFFAEEQRDVLEQQCSAFAVDRHSLRAAGLAFEPETSAVVMRDLVIHMGPHGLGLLLNVQRGGVVVSELTQLPPGIVNPGQAAGVQVGDLVVSVDSIVAEKPRSLAEGLNNEHLVKSGKNAIMKVLTRVPLTDGRGEPLASAMKYSAVDMVKGALLEGEIMLHHSFVIGAGWKGQACREWRLGVSFAGQGV-----GRGLEHGTLTAAGTTWTNSSGR------TGQTDGVKATTFPTGHHPPLQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDALPELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            LDPLGEV+RILR++++SEE+KPF   P+D D+ PE                           + +RPLDLGTIL RAENGWYD++P ++PPV SNSFGAGHAGVA DVEL+Q+GWLEA+G DS I+EQAR +VD+F+ALYE HVL PL  L+++ RG           G G  E  GR L     DS             +EM+R+MGSEEY RWSPAA+SRALA LCDEA+ + T++D+ ++V EA+E+VDRKDRE+KAAV+  +R Q+    +    P +  RRGTEAEM+ AR+  E P+ +T+R+LG ++VRLKPLG DR RRRYWL A GEDHR+F + ++ WGCY RVSQLKAL  WLDRRG RER LKAA+REHL  NLGVS  +L P  RP        S  D   G G++           D Q+Y+GEPA VAREKERER+AG  AL SCGF AEEQR  L++ CS+FAVD HSLRAAGLAFE +TS  VMRDL +HMGP+GLGL L+V+ GGVVV  LTQ+PPG+ NPGQAAGV++GDL+VSVD+IVAE PR LA+GL +  L +SGK  ++KVL+ V LTDG+GEPL  A+ Y+A+DMVKGALLE E  LHHSFV+G GW+GQAC EWRLGVSFAGQG      G G     + A G T + +  +      T +  G     F  G  P L+  G + LGP +  A R AV++L  RML +EALV +QDTVVDARW + GRRRKWRTFV+NAQTA QLLAAWGAFK +IDW+AA GC+S+LDRR FL+LLPA+ RN +PDKG+ V+Y+GDGH LS+EAEAKAGYR   G D P+PG ++  TV S+ YHQGGS RRAKGAQPF T+ELEP P P +  ELGLLPP+EPFG LNRLLK+++KAMR   D  HFL PVSR IYPDYYDVISEPMDL+KLWKRCS CRY++VE+FK +L+LVASNCRLYCQ+KFP LPP
Sbjct:  803 LDPLGEVMRILRHLLKSEEAKPFADVPSDDDVTPESESGLGDDGGFXXXXXXXXXXXXXXKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEE-GRVLLRSDTDSEGARRGATGCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHN--RRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPP 1788          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 590 bits (1521), Expect = 7.550e-177
Identity = 375/746 (50.27%), Postives = 467/746 (62.60%), Query Frame = 2
Query:    8 LTCGREGKQDAYWKSFLPSLG--GGXXXXXXXXXXXXXXASGDDE-------------------------FGGAPETTLAGLRGSRELIQASSHGFPELLRLVAIHRQGV------RTAAARGFAGLATARDGNEDERISMPMQAIALDPLGEVIRILRYVMRSEESKPFLGTPTDADINPE-----------------GVVTGHQPR-------RPLDLGTILERAENGWYDMDPRSQPPVTSNSFGAGHAGVAQDVELVQEGWLEARGRDSVIYEQARALVDDFMALYEAHVLKPLAHLERNDRGGKCPATKDGKDGDGNRESFGRSLSPPKLDS-------------MEMLRKMGSEEYARWSPAAKSRALAMLCDEAMGSGTLSDVARKVFEAREMVDRKDREMKAAVKDVIRGQQERGPQRLQAPTSTSRRGTEAEMVAARVAAEGPEFRTIRQLGHLRVRLKPLGTDRYRRRYWLLARGEDHRV-FTQLDDEWGCYER--VSQLKALLAWLDRRGTRERVLKAAIREHLTVNLGVSTDDLYPPSRP------SRTD-------WNTG--KGSKCYEEDRQEYIGEPAGVAREKERERAAGKEALKSCGFFAEEQRDVLEQQCSAFAVDRHSLRAAGLAFEPETSAVVMRDLVIHMGPHGLGLLLNVQRGGVVVSELTQLPPGIVNPGQAAGVQVGDLVVSVDSIVAEKPRSLAEGLNNEHLVKSGKNAIMKVLTRVPLTD 1981
            L CGREGKQ+ YW++ LPS+   GGXXXXXXXXXXXXXX                               FGGAPETTL GLR SREL+QAS HGFPELLRLVAIHR+G+      R  AA                          LDPLGEV+RILR++++SEE+KPF   P+D D+ PE                 GVV   + +       RPLDLGTIL RAENGWYD++P ++PPV SNSFGAGHAGVA DVEL+Q+GWLEA+G DS I+EQAR +VD+F+ALYE HVL PL  L+++ RG    A      G G  E  GR L     DS             +EM+R+MGSEEY RWSPAA+SRALA LCDEA+ + T++D+ +KV EA+E+VDRKDRE+KAAV+  +R Q+    +    P +  RR TEAEM+ AR+  E P+ +T+R+LG ++VRLKPLG DR RRRYWL A GE     ++     +G       S  ++   W           +AA+REHL  NLGVS  +L P  RP       R+D        N G  +G +  EED Q+Y+GEPA VAREKERER+AG  AL SCGF AEEQR  L++ CS+FAVD HSLRAAGLAFE +T   VMRDL +HMGP+GLGL L+V+ GGVVV  LT++PPG+ NPGQAAGV++GDL+VSVD+IVAE PR LA+GL +  L +SGK  ++K   R   T+
Sbjct: 1114 LRCGREGKQETYWRNLLPSVNRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGGAPETTLPGLRDSRELVQASPHGFPELLRLVAIHREGLLRRVETRRMAAXXXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESESDLGDDGGFGGQGEGGVVNKEEEKEEKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAA----GRGELEE-GRVLLRSDTDSEDARRGAAGCNDPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHN--RRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEALTTGYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKACDRFVKTN 1852          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 1.250e-124
Identity = 201/294 (68.37%), Postives = 238/294 (80.95%), Query Frame = 2
Query: 2255 FPTGHHPPLQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDALPELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            F  G  P L+  G + LGP +  A R AV++L  RML +EALV +QDTVVDARW + GRRRKWRTFV+NAQTA QLLAAWGAFK +IDW+AA GC+S+LDRR FL+LLPA+ RN +PDKG+ V+Y+GDGH LS+EAEAKAGYR   G D P+PG ++  TV S+ YHQGGS RRAKGAQPF T+ELEP P P +  ELGLLPP+EPFG LNRLLK+++KAMR   D  HFL PVSR IYPDYYDVISEPMDL+KLWKRCS CRY++VE+FK +L+LVASNCRLYCQ+KFP LPP
Sbjct:   24 FQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLHIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPP 317          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.210e-48
Identity = 196/704 (27.84%), Postives = 301/704 (42.76%), Query Frame = 2
Query: 1115 AEMVAARVAAEGPEFRTIRQLGHLRVRLKPLGTDRYRRRYWLLARGEDHRVFTQ--LDDEWGCYERVSQLKALLAWLDRRGTRERVLKAAIRE---HLTVNLGVSTDDLYPPSRPSRTDWNTGKGSKCYEEDRQEYIGEPAGVAREKERERAAGKEALKSCGF-FAEEQRDVLEQQCSAFAVDRHSLRAAGLAFEPETSAVVMRDLVIHMGPHGLGLLLNVQRGGVVVSELTQLPPGIVNPGQAAGVQVGDLVVSVDSIVAEKPRSLAEGLNNEHLV--------KSGKNAIMKVLTRVPLTDGRGEPLASAMKYSAVDMVKGALLEGEIMLHHSFVIGAGWKG-QACREWRLGVSFAGQGVGRGLEHGTLTAAGTTWTNSSGRTGQTDGVKATTFPTGHHPPLQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTV--VDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSR-RRAKGAQPFVTMEL--------EPLPTPDALPE--------LGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFP 3124
            A++   ++A+E  E ++ R L  L  RL+PLG DR+ RRYWL+ R E     +   L ++   +   S + +LL  L +      + + A+R+   HL ++ G+S        +PS    +      CY   R  ++  PA +        AAG     S  F  A++QR  L   C    V   +L         E   ++  D+    G HG+ L+   ++G + V    +   G  +    AGV   D +V+V       P  +A      H+V        +      ++ +  VPL D   +      +   +  + G LL+ E +L H + +G GW G +    WR  V                                   + ATT                        V D V  L    L LE+ ++ + TV  VD RW +  RRRKWR FV  A+T+ QL+ AW A +  +DW  A+  ++ L RR FL  +P+  RN +PD G+ V+YFGDGH  ++  +   G  A  G   P  GA+    V  + Y  G  +       QPF T +L        + +P+    PE        LGL PP +  G LNRLL+RS+     T  +  F++PV     PDY +V++ PMDL  +W++     Y T+EQF+ DL+LV  NC  YC  ++P
Sbjct: 1355 AQVAKEQLASESAEMKSYRYLAALVQRLEPLGHDRHHRRYWLINRDETAGADSGHVLAEDGTNWYSFSTVGSLLE-LHKWLDARGIRENALRQVLRHLLLDNGLS--------QPSELAAHHHPDEHCYA--RVAFLA-PARIL-------AAG-----SMDFTMAQQQRSALTLGCKDLIVAPDALVPPDDTSYREGPLLLSADVEAG-GGHGMTLV--AEKGSLFVKRACEKGGGGPDAAARAGVLAKDGLVAVRGRCVRTPEEVAALAEASHIVAVEVETADQDQPTYSIQFVRTVPLED---KDTKLPAQIPPLQYLAGLLLDSESLLCHPYNVGEGWVGGRKSVAWRQSV-----------------------------------ISATT------------------------VSDLVPAL----LDLESALAHKQTVLGVDGRW-QGARRRKWRAFVARARTSAQLVIAWSALEACLDWATAAAVWAALSRRAFLQNIPSQGRNTMPDIGDVVVYFGDGHTAALTFDKALGLSAMWGGQPPVEGAVLLCRVQEIAYCTGVPQGSELSPMQPFATFKLXXXXXXXXQVIPSDHQEPEVPTLPKEPLGLKPPGDSRGMLNRLLRRSLAVASRTPGSQPFMQPVDYSTNPDYREVVARPMDLGTIWRQTVEGHYATLEQFEQDLALVLDNCHAYCDSRYP 1964          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: W7U279_9STRA (Transcription initiation factor subunit taf1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U279_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.260e-34
Identity = 254/1094 (23.22%), Postives = 391/1094 (35.74%), Query Frame = 2
Query:  317 ERISMPMQAIALDPLGEVIRILRYVMRSEE-SKPFLGTPTDADINPEGVVTGHQPRRPLDLGTILERAENGWYDMDP------------RSQPP------------------------------------------------------------VTSNSFGAGHAGVAQDVELVQEGWLEARGRDSVIYEQARALVDDFMALYEAHVLKPLAHLER--NDRGGKCPATKDGK----------DGDGNRE------------------SFGRSLSPPKLDSMEMLRKMGSEEYARWSPAAKSRALAMLCDEAMGSGTLSDVARKVFEAREMVDRKDREMKAAVKDVIRGQQERGPQRLQAPTSTSRRGTEAEMVAARVAAEGP--------------------EFRTIRQLGHLRVRLKPLGTDRYRRRYWLLARGEDHRVFTQLDDEWG----CYERVSQLKALLAWLDRRGTRERVLKAAIREHLTVNLGVSTDDLYPPSRPSRTDWNTGKGSKCYEEDRQEYIGEPAGVAREKERERAAGKEALKSCGFFAEEQRDVLEQQCSAFAVDRHSLRAAGLAFEPETSAVVMRDLVIHMGPHG-LGLLLNVQRGGVVV-----SELTQLPPGIVNPGQAAGVQVGDLVVSVDSIVAEKPRSLAEGLNNE----HLVKSGKNAIMKVLTRVP---LTDGRGEPLASAMKYSAVDMVKGALLEGEIMLHHSFVIGAGWKGQACR-EWRLGVSFAGQGVGRGLEHGTLTAAGTTWTNSSGRTGQTDGVKATTFPTGHHPPLQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAK--------AGYRAAGGVDAPKPGAIRHFTVTSVGYHQ-GGSRRRAKGAQPFVTMELEPLPTPDA---LPE--LGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLP 3133
            ER  +P++   LDPLGE+ R+L  + +  + S PF      A  +  G  +  +   P+DLGTI++R + GWY+ +             + +P                                                             +++ S G G  GV  DV LV     +  G D+ + E A+AL ++     +  VL+PL    +     G K    +DGK           GDG  E                  S G + +P       ++ ++G   +A      +   L  L DE   S T+ ++   V  ARE                        P R  A   T+ R  +A M A + AA+                      EF  + +L    +RL+PLG DR+ RRYW     + H V+ + D+  G     Y     L AL+ WL  R  RE  L++ + E LT        DL        +    G+G+                           G+++ +S   F   Q        SA+A    +L +   A  P+    +   L I     G LGL+   Q   +         L + PP         G+ V D +V V+  + + P+  +  + ++    HL          ++ R      T    + L   +  S  + V+G LL  E  + H   IG  W+G   +  WR       Q V R L                      DG K                         E++R A  +L  R+     ++S++D    A    KG   KWR ++  AQT  QLL        ++D    +     ++R  + ALLP     E+PD G+ VIY+  GH  ++   A+         G        A   GA++   V  + YH    + +    +  +  ++L  L  P      PE  L L  P EP  +L+RLL R + +    R+A  F EPV R  YPDYY++I  PMD + L  R     Y  +  F  DL L++ NC  YC  +FP LP
Sbjct:  745 ERFHLPLETY-LDPLGELQRLLEDLAQGNKASLPFFHRVDPAKDDMPGYASIVE--EPMDLGTIVQRLKTGWYEEEAIHRGKVLGEGKEKEEPTQAKQKEEQMGEAGGEAPKEEENGREAADPLPAGSGVEDTAQTVPSTAAAGETVPSFGSRGLSTRSKGRGAKGVLDDVRLVWVNCEQYHGPDAALTEVAQALSEELEEKIQTRVLEPLERRAKWLAGEGRKEGEVEDGKREEEDRVLGLGGDGEGEDGGVAASTTTEVGSKLTSSLGLASAPDIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGARE------------------------PYRKMAARRTAFRAQKAHMAAQQQAAQASGYAPPPSPANLEGWTQADEREFLRVSELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAE-DEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIE-LTERYYPDGPDLTQAINVPYSPVPNGEGA-------------------------VNGRKSTESADAFCRYQ--------SAYA--GVNLPSEQQAMMPDLYRYICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPF-----PRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWR-------QMVMRAL----------------------DGEKK----------------------KAESLRKAALELEGRLRACGTVLSKEDREGRA----KGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGHKAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLP 1714          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: I2CQX7_NANGC (Transcription initiation factor TFIID subunit 1 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX7_NANGC)

HSP 1 Score: 135 bits (341), Expect = 3.640e-28
Identity = 199/827 (24.06%), Postives = 304/827 (36.76%), Query Frame = 2
Query:  809 SFGRSLSPPKLDSMEMLRKMGSEEYARWSPAAKSRALAMLCDEAMGSGTLSDVARKVFEAREMVDRKDREMKAAVKDVIRGQQERGPQRLQAPTSTSRRGTEAEMVAARVAAEGP--------------------EFRTIRQLGHLRVRLKPLGTDRYRRRYWLLARGEDHRVFTQLDDEWG----CYERVSQLKALLAWLDRRGTRERVLKAAIREHLTVNLGVSTDDLYPPSRPSRTDWNTGKGSKCYEEDRQEYIGEPAGVAREKERERAAGKEALKSCGFFAEEQRDVLEQQCSAFAVDRHSLRAAGLAFEPETSAVVMRDLVIHMGPHG-LGLLLNVQRGGVVV-----SELTQLPPGIVNPGQAAGVQVGDLVVSVDSIVAEKPRSLAEGLNNE----HLVKSGKNAIMKVLTRVP---LTDGRGEPLASAMKYSAVDMVKGALLEGEIMLHHSFVIGAGWKGQACR-EWRLGVSFAGQGVGRGLEHGTLTAAGTTWTNSSGRTGQTDGVKATTFPTGHHPPLQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAK--------AGYRAAGGVDAPKPGAIRHFTVTSVGYHQ-GGSRRRAKGAQPFVTMELEPLPTPDA---LPE--LGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLP 3133
            S G + +P       ++ ++G   +A      +   L  L DE   S T+ ++   V  ARE                        P R  A   T+ R  +A M A + AA+                      EF  + +L    +RL+PLG DR+ RRYW     + H V+ + D+  G     Y     L AL+ WL  R  RE  L++ + E LT        DL        +    G+G+                           G+++ +S   F   Q        SA+A    +L +   A  P+    +   L I     G LGL+   Q   +         L + PP         G+ V D +V V+  + + P+  +  + ++    HL          ++ R      T    + L   +  S  + V+G LL  E  + H   IG  W+G   +  WR       Q V R L                      DG K                         E++R A  +L  R+     ++S++D    A    KG   KWR ++  AQT  QLL        ++D    +     ++R  + ALLP     E+PD G+ VIY+  GH  ++   A+         G        A   GA++   V  + YH    + +    +  +  ++L  L  P      PE  L L  P EP  +L+RLL R + +    R+A  F EPV R  YPDYY++I  PMD + L  R     Y  +  F  DL L++ NC  YC  +FP LP
Sbjct:   18 SLGLASAPDIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGARE------------------------PYRKMAARRTAFRAQKAHMAAQQQAAQASGYAPPPSPANLEGWTQADEREFLRVSELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAE-DEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIE-LTERYYPDGPDLTQAINVPYSPVPNGEGA-------------------------VNGRKSTESADAFCRYQ--------SAYA--GVNLPSEQQAMMPDLYRYICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPF-----PRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWR-------QMVMRAL----------------------DGEKK----------------------KAESLRKAALELEGRLRACGTVLSKEDREGRA----KGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGHKAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLP 723          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.680e-27
Identity = 94/284 (33.10%), Postives = 139/284 (48.94%), Query Frame = 2
Query: 2318 EEAVRDAVKQLGWRMLQLE----ALVSQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWGAF-KKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGY-RAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDAL-----PELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            E A  DA + L    LQLE    A  +  +  V   W +K  RR+WR  +  A T  QL         + ++ +A    +++LDR+ +  L    +RN IP+ G  V+YFGDGHA +++ +AKA   R A   + P+  A     V SV YH GG         P+  + L P P          P   L P   P   L+R+L R +  ++   DA  FLEPVS   +P+Y +++ +PMDLS + ++     Y+   Q   D+ L+ SNC L+C  +FP LPP
Sbjct: 1516 EAATFDAARDL---FLQLEDAVVAAAAAGNEAVRPSWQRK--RREWRLALEGACTYAQLAFLLHLLLDECVNVDAFMDQYARLDRKDWFKLRAKESRNFIPEVGKDVVYFGDGHAQALKEDAKAKKKRLAKKSEPPRSRATLVCAVESVSYHHGGG-------DPYALVVLAPRPDVSGYSFVRAPGSVLCPQPSPAQRLSRILMRVVSKLKLQTDAGPFLEPVSDREFPEYKEIVLQPMDLSAVTRKVRALEYRDAGQLLADMRLICSNCELFCDGRFPALPP 1787          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A485LQJ0_9STRA (Aste57867_24503 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQJ0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.000e-26
Identity = 92/263 (34.98%), Postives = 133/263 (50.57%), Query Frame = 2
Query: 2360 MLQLEALVSQQ--DTVVDARWGKKGRRRKWRTFVHNAQTAVQLLAAWG-AFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQ-PFVTMELEPLPTPDALPELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            +L+LE   S    D ++  +W +K  RR+W+  V  +QT  QLL       ++    +A      +LDR+ +  L P +ARN  P+    V+YFGDGHA +++ + K   +     DAP         VT+V YH G     A     P V       P      EL   PPS     L R+L R +  +R   D+  FLEPVS++ +P Y D+I +PMDLSK+  +  T +Y  V+ F  DL L+A NC L+C+ +FP LPP
Sbjct: 1265 ILELEKYFSTSLNDDLIQQQWKRK--RREWQMGVEGSQTFAQLLFLMNYLLQECFVLDAFVDYVVQLDRKEWFKLRPKSARNFCPEVDQDVVYFGDGHAQAMKDDKK--NKKPVKCDAPLLKTTIACKVTNVSYHHGSGDPYALVTMVPHVNSAFRKTPG-----ELLCTPPSS-VQRLGRVLMRIVGKLRSDPDSGPFLEPVSKVDFPTYTDIILKPMDLSKIANKVKTEKYNNVKDFVDDLKLMADNCSLFCEGRFPTLPP 1517          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A024TEJ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEJ5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.740e-26
Identity = 92/266 (34.59%), Postives = 132/266 (49.62%), Query Frame = 2
Query: 2360 MLQLEALV--SQQDTVVDARWGKKGRRRKWRTFVHNAQTAVQLLA-AWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDAL----PELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            +L+LE  +  S  D +V   W +K  R  WR+ V  ++T  QLL        K    +A      +LDR+ +L L P  +RN  P+    V+YFGDGH  +V+A+ K   +     DAP  G      VT + YH G          P+  + L P    DA     P   L         L R+L R +  +R   DA  FL+PVS+  +P Y D+I  PMDLSK+ +     +YKTV++F  D+ L+A NC+L+C+ +FP LPP
Sbjct: 1298 VLELEQYLFTSLNDDLVQDVWKRK--RHDWRSAVEASRTFPQLLVLVMALLDKCFIVDAFIDYVVQLDRKEWLKLRPKPSRNFCPEVDQQVVYFGDGHDQAVKADRK--NKKPVKCDAPLVGTTLICRVTHISYHHGSG-------DPYAMLTLRP--ESDAALARAPGSYLCTSPSAVQKLGRILARIVSKLRAEPDAGPFLDPVSKADFPTYTDIIVHPMDLSKISQNVHDGKYKTVDEFVGDVKLMADNCQLFCEGRFPTLPP 1550          
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Match: A0A418B6I9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B6I9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.320e-26
Identity = 88/253 (34.78%), Postives = 125/253 (49.41%), Query Frame = 2
Query: 2393 DTVVDARWGKKGRRRKWRTFVHNAQTAVQLLA-AWGAFKKMIDWEAASGCFSKLDRRTFLALLPANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRHFTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDAL----PELGLLPPSEPFGTLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPP 3136
            D +V   W +K  R  WR+ V  ++T  QLL        K    +A      +LDR+ +L L P  +RN  P+    V+YFGDGH  +V+A+ K   +     DAP  G      VT + YH G          P+  + L P    DA     P   L         L R+L R +  +R   DA  FL+PVS+  +P Y D+I  PMDLSK+ +     +YKTV++F  D+ L+A NC+L+C+ +FP LPP
Sbjct:  791 DDLVQDVWKRK--RHDWRSAVEASRTFPQLLVLVMALLDKCFIVDAFIDYVVQLDRKEWLKLRPKPSRNFCPEVDQQVVYFGDGHDQAVKADRK--NKKPVKCDAPLVGTTLICRVTHISYHHGSG-------DPYAMLTLRP--ESDAALARAPGSYLCTSPSAVQKLGRILARIVSKLRAEPDAGPFLDPVSKADFPTYTDIIVHPMDLSKISQNVHDGKYKTVDEFVGDVKLMADNCQLFCEGRFPTLPP 1030          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R7_ECTSI0.000e+058.95Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L351_9PHAE7.550e-17750.27DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L3E5_9PHAE1.250e-12468.37Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZDW7_9STRA2.210e-4827.84Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
W7U279_9STRA1.260e-3423.22Transcription initiation factor subunit taf1 n=2 T... [more]
I2CQX7_NANGC3.640e-2824.06Transcription initiation factor TFIID subunit 1 (F... [more]
A0A5D6YQF5_9STRA3.680e-2733.10Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485LQJ0_9STRA1.000e-2634.98Aste57867_24503 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TEJ5_9STRA1.740e-2634.59Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A418B6I9_9STRA2.320e-2634.78Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig740contigF-serratus_M_contig740:348158..359295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1107.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G6R7
KEGG koko:K03125
KEGG Pathwayko03022,map03022
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of protein autoubiquitination
EggNOG OGsCOG5179@1,KOG0008@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Exons21
Model size4915
Cds size2874
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932244.6889338-UTR-F-serratus_M_contig740:348157..3484851622932244.6889338-UTR-F-serratus_M_contig740:348157..348485Fucus serratus maleUTRF-serratus_M_contig740 348158..348485 +
1690964216.0217078-UTR-F-serratus_M_contig740:348157..3484851690964216.0217078-UTR-F-serratus_M_contig740:348157..348485Fucus serratus maleUTRF-serratus_M_contig740 348158..348485 +
1622932245.0419095-UTR-F-serratus_M_contig740:356806..3569211622932245.0419095-UTR-F-serratus_M_contig740:356806..356921Fucus serratus maleUTRF-serratus_M_contig740 356807..356921 +
1690964216.2213511-UTR-F-serratus_M_contig740:356806..3569211690964216.2213511-UTR-F-serratus_M_contig740:356806..356921Fucus serratus maleUTRF-serratus_M_contig740 356807..356921 +
1622932245.055718-UTR-F-serratus_M_contig740:357194..3573031622932245.055718-UTR-F-serratus_M_contig740:357194..357303Fucus serratus maleUTRF-serratus_M_contig740 357195..357303 +
1690964216.2319646-UTR-F-serratus_M_contig740:357194..3573031690964216.2319646-UTR-F-serratus_M_contig740:357194..357303Fucus serratus maleUTRF-serratus_M_contig740 357195..357303 +
1622932245.0742192-UTR-F-serratus_M_contig740:357583..3582981622932245.0742192-UTR-F-serratus_M_contig740:357583..358298Fucus serratus maleUTRF-serratus_M_contig740 357584..358298 +
1690964216.2458131-UTR-F-serratus_M_contig740:357583..3582981690964216.2458131-UTR-F-serratus_M_contig740:357583..358298Fucus serratus maleUTRF-serratus_M_contig740 357584..358298 +
1622932245.0931025-UTR-F-serratus_M_contig740:358521..3592951622932245.0931025-UTR-F-serratus_M_contig740:358521..359295Fucus serratus maleUTRF-serratus_M_contig740 358522..359295 +
1690964216.2639675-UTR-F-serratus_M_contig740:358521..3592951690964216.2639675-UTR-F-serratus_M_contig740:358521..359295Fucus serratus maleUTRF-serratus_M_contig740 358522..359295 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932244.715087-CDS-F-serratus_M_contig740:348485..3487101622932244.715087-CDS-F-serratus_M_contig740:348485..348710Fucus serratus maleCDSF-serratus_M_contig740 348486..348710 +
1690964216.0349138-CDS-F-serratus_M_contig740:348485..3487101690964216.0349138-CDS-F-serratus_M_contig740:348485..348710Fucus serratus maleCDSF-serratus_M_contig740 348486..348710 +
1622932244.7321732-CDS-F-serratus_M_contig740:348899..3490161622932244.7321732-CDS-F-serratus_M_contig740:348899..349016Fucus serratus maleCDSF-serratus_M_contig740 348900..349016 +
1690964216.0456922-CDS-F-serratus_M_contig740:348899..3490161690964216.0456922-CDS-F-serratus_M_contig740:348899..349016Fucus serratus maleCDSF-serratus_M_contig740 348900..349016 +
1622932244.7469375-CDS-F-serratus_M_contig740:349301..3496491622932244.7469375-CDS-F-serratus_M_contig740:349301..349649Fucus serratus maleCDSF-serratus_M_contig740 349302..349649 +
1690964216.0615623-CDS-F-serratus_M_contig740:349301..3496491690964216.0615623-CDS-F-serratus_M_contig740:349301..349649Fucus serratus maleCDSF-serratus_M_contig740 349302..349649 +
1622932244.7637072-CDS-F-serratus_M_contig740:349904..3499601622932244.7637072-CDS-F-serratus_M_contig740:349904..349960Fucus serratus maleCDSF-serratus_M_contig740 349905..349960 +
1690964216.0729003-CDS-F-serratus_M_contig740:349904..3499601690964216.0729003-CDS-F-serratus_M_contig740:349904..349960Fucus serratus maleCDSF-serratus_M_contig740 349905..349960 +
1622932244.7785106-CDS-F-serratus_M_contig740:350309..3504901622932244.7785106-CDS-F-serratus_M_contig740:350309..350490Fucus serratus maleCDSF-serratus_M_contig740 350310..350490 +
1690964216.0820513-CDS-F-serratus_M_contig740:350309..3504901690964216.0820513-CDS-F-serratus_M_contig740:350309..350490Fucus serratus maleCDSF-serratus_M_contig740 350310..350490 +
1622932244.8010721-CDS-F-serratus_M_contig740:350903..3510201622932244.8010721-CDS-F-serratus_M_contig740:350903..351020Fucus serratus maleCDSF-serratus_M_contig740 350904..351020 +
1690964216.0915434-CDS-F-serratus_M_contig740:350903..3510201690964216.0915434-CDS-F-serratus_M_contig740:350903..351020Fucus serratus maleCDSF-serratus_M_contig740 350904..351020 +
1622932244.8190362-CDS-F-serratus_M_contig740:351512..3516441622932244.8190362-CDS-F-serratus_M_contig740:351512..351644Fucus serratus maleCDSF-serratus_M_contig740 351513..351644 +
1690964216.101747-CDS-F-serratus_M_contig740:351512..3516441690964216.101747-CDS-F-serratus_M_contig740:351512..351644Fucus serratus maleCDSF-serratus_M_contig740 351513..351644 +
1622932244.8331993-CDS-F-serratus_M_contig740:352153..3522781622932244.8331993-CDS-F-serratus_M_contig740:352153..352278Fucus serratus maleCDSF-serratus_M_contig740 352154..352278 +
1690964216.112584-CDS-F-serratus_M_contig740:352153..3522781690964216.112584-CDS-F-serratus_M_contig740:352153..352278Fucus serratus maleCDSF-serratus_M_contig740 352154..352278 +
1622932244.8528638-CDS-F-serratus_M_contig740:352632..3528281622932244.8528638-CDS-F-serratus_M_contig740:352632..352828Fucus serratus maleCDSF-serratus_M_contig740 352633..352828 +
1690964216.1247537-CDS-F-serratus_M_contig740:352632..3528281690964216.1247537-CDS-F-serratus_M_contig740:352632..352828Fucus serratus maleCDSF-serratus_M_contig740 352633..352828 +
1622932244.8691306-CDS-F-serratus_M_contig740:353179..3533081622932244.8691306-CDS-F-serratus_M_contig740:353179..353308Fucus serratus maleCDSF-serratus_M_contig740 353180..353308 +
1690964216.1340277-CDS-F-serratus_M_contig740:353179..3533081690964216.1340277-CDS-F-serratus_M_contig740:353179..353308Fucus serratus maleCDSF-serratus_M_contig740 353180..353308 +
1622932244.8856082-CDS-F-serratus_M_contig740:353508..3535921622932244.8856082-CDS-F-serratus_M_contig740:353508..353592Fucus serratus maleCDSF-serratus_M_contig740 353509..353592 +
1690964216.1422672-CDS-F-serratus_M_contig740:353508..3535921690964216.1422672-CDS-F-serratus_M_contig740:353508..353592Fucus serratus maleCDSF-serratus_M_contig740 353509..353592 +
1622932244.9018977-CDS-F-serratus_M_contig740:354068..3544271622932244.9018977-CDS-F-serratus_M_contig740:354068..354427Fucus serratus maleCDSF-serratus_M_contig740 354069..354427 +
1690964216.1505504-CDS-F-serratus_M_contig740:354068..3544271690964216.1505504-CDS-F-serratus_M_contig740:354068..354427Fucus serratus maleCDSF-serratus_M_contig740 354069..354427 +
1622932244.935289-CDS-F-serratus_M_contig740:354642..3547511622932244.935289-CDS-F-serratus_M_contig740:354642..354751Fucus serratus maleCDSF-serratus_M_contig740 354643..354751 +
1690964216.159053-CDS-F-serratus_M_contig740:354642..3547511690964216.159053-CDS-F-serratus_M_contig740:354642..354751Fucus serratus maleCDSF-serratus_M_contig740 354643..354751 +
1622932244.953568-CDS-F-serratus_M_contig740:354975..3551341622932244.953568-CDS-F-serratus_M_contig740:354975..355134Fucus serratus maleCDSF-serratus_M_contig740 354976..355134 +
1690964216.1758792-CDS-F-serratus_M_contig740:354975..3551341690964216.1758792-CDS-F-serratus_M_contig740:354975..355134Fucus serratus maleCDSF-serratus_M_contig740 354976..355134 +
1622932244.9723308-CDS-F-serratus_M_contig740:355376..3555261622932244.9723308-CDS-F-serratus_M_contig740:355376..355526Fucus serratus maleCDSF-serratus_M_contig740 355377..355526 +
1690964216.1846018-CDS-F-serratus_M_contig740:355376..3555261690964216.1846018-CDS-F-serratus_M_contig740:355376..355526Fucus serratus maleCDSF-serratus_M_contig740 355377..355526 +
1622932244.9904535-CDS-F-serratus_M_contig740:355877..3560371622932244.9904535-CDS-F-serratus_M_contig740:355877..356037Fucus serratus maleCDSF-serratus_M_contig740 355878..356037 +
1690964216.1922996-CDS-F-serratus_M_contig740:355877..3560371690964216.1922996-CDS-F-serratus_M_contig740:355877..356037Fucus serratus maleCDSF-serratus_M_contig740 355878..356037 +
1622932245.004609-CDS-F-serratus_M_contig740:356262..3564431622932245.004609-CDS-F-serratus_M_contig740:356262..356443Fucus serratus maleCDSF-serratus_M_contig740 356263..356443 +
1690964216.200944-CDS-F-serratus_M_contig740:356262..3564431690964216.200944-CDS-F-serratus_M_contig740:356262..356443Fucus serratus maleCDSF-serratus_M_contig740 356263..356443 +
1622932245.0188615-CDS-F-serratus_M_contig740:356760..3568061622932245.0188615-CDS-F-serratus_M_contig740:356760..356806Fucus serratus maleCDSF-serratus_M_contig740 356761..356806 +
1690964216.20997-CDS-F-serratus_M_contig740:356760..3568061690964216.20997-CDS-F-serratus_M_contig740:356760..356806Fucus serratus maleCDSF-serratus_M_contig740 356761..356806 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig740.18666.1prot_F-serratus_M_contig740.18666.1Fucus serratus malepolypeptideF-serratus_M_contig740 348486..356806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig740.18666.1

>prot_F-serratus_M_contig740.18666.1 ID=prot_F-serratus_M_contig740.18666.1|Name=mRNA_F-serratus_M_contig740.18666.1|organism=Fucus serratus male|type=polypeptide|length=958bp
MPMQAIALDPLGEVIRILRYVMRSEESKPFLGTPTDADINPEGVVTGHQP
RRPLDLGTILERAENGWYDMDPRSQPPVTSNSFGAGHAGVAQDVELVQEG
WLEARGRDSVIYEQARALVDDFMALYEAHVLKPLAHLERNDRGGKCPATK
DGKDGDGNRESFGRSLSPPKLDSMEMLRKMGSEEYARWSPAAKSRALAML
CDEAMGSGTLSDVARKVFEAREMVDRKDREMKAAVKDVIRGQQERGPQRL
QAPTSTSRRGTEAEMVAARVAAEGPEFRTIRQLGHLRVRLKPLGTDRYRR
RYWLLARGEDHRVFTQLDDEWGCYERVSQLKALLAWLDRRGTRERVLKAA
IREHLTVNLGVSTDDLYPPSRPSRTDWNTGKGSKCYEEDRQEYIGEPAGV
AREKERERAAGKEALKSCGFFAEEQRDVLEQQCSAFAVDRHSLRAAGLAF
EPETSAVVMRDLVIHMGPHGLGLLLNVQRGGVVVSELTQLPPGIVNPGQA
AGVQVGDLVVSVDSIVAEKPRSLAEGLNNEHLVKSGKNAIMKVLTRVPLT
DGRGEPLASAMKYSAVDMVKGALLEGEIMLHHSFVIGAGWKGQACREWRL
GVSFAGQGVGRGLEHGTLTAAGTTWTNSSGRTGQTDGVKATTFPTGHHPP
LQGVGAVELGPTTEEAVRDAVKQLGWRMLQLEALVSQQDTVVDARWGKKG
RRRKWRTFVHNAQTAVQLLAAWGAFKKMIDWEAASGCFSKLDRRTFLALL
PANARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAAGGVDAPKPGAIRH
FTVTSVGYHQGGSRRRAKGAQPFVTMELEPLPTPDALPELGLLPPSEPFG
TLNRLLKRSIKAMRGTRDAMHFLEPVSRMIYPDYYDVISEPMDLSKLWKR
CSTCRYKTVEQFKHDLSLVASNCRLYCQEKFPNLPPRQMQPSRWVWLRST
NPLLQRL*
back to top

mRNA from alignment at F-serratus_M_contig740:348158..359295+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig740.18666.1 ID=mRNA_F-serratus_M_contig740.18666.1|Name=mRNA_F-serratus_M_contig740.18666.1|organism=Fucus serratus male|type=mRNA|length=11138bp|location=Sequence derived from alignment at F-serratus_M_contig740:348158..359295+ (Fucus serratus male)
GCGCACATTGACCTGCGGTCGTGAGGGCAAGCAAGACGCTTACTGGAAAA GTTTTCTTCCTTCGCTTGGTGGGGGTGGGGATGGTTCGGGAAACGGAGAC GCTGGCGCAGGGCAAGGCGCCTCAGGGGACGATGAGTTTGGCGGCGCTCC GGAGACAACACTCGCAGGGCTGCGAGGCTCGCGGGAGCTTATCCAGGCGA GTTCGCACGGATTTCCCGAGTTGCTGAGACTCGTGGCGATTCATCGTCAG GGGGTTCGCACCGCTGCGGCTCGAGGTTTTGCGGGTCTGGCGACAGCACG TGACGGTAACGAGGATGAGCGGATTTCGATGCCTATGCAGGCGATAGCGC TTGATCCTTTGGGAGAGGTGATTCGCATCTTGCGGTACGTGATGCGGTCC GAAGAGTCCAAACCCTTCCTAGGCACGCCTACGGACGCCGACATCAACCC CGAAGGCGTGGTCACGGGCCACCAGCCTAGGCGGCCGTTGGACCTAGGCA CAATCCTGGAGCGTGCGGAGAATGGGTGGTACGACATGGACCCTCGGAGC CAGGTACGATGATGATTAAAGAGGATTGAGGAGGGCGGGTGACGCTCGAA GCTCATAGTTAAATATGGCAAGGACCCGTGAAGTTACTATTAGCTCTCGT GGCGATCGATCCCTTGCATGGCCGAAGCTAATTTATCCTGACACTTTGTC CTTTTGTTGCCTTTTGCTGGTACCGCGCATGTGTGTTGGCAGCCTCCAGT GACGTCCAACAGCTTCGGCGCCGGACATGCAGGAGTAGCGCAGGACGTGG AGCTGGTGCAGGAAGGCTGGTTGGAGGCTAGGGGTAGAGACAGCGTAATC TACGAGCAGGTATTTCCTTGTGGTGGGATGTATGCGGAGCTCCTTTGGCT CTCGTTCGTTCCTCGGTGGCGGGGTACGCATGGCACTGTCAAAGTTTGGC GATCCGAGAGAGACATGACAAATGGGCCAATCGAGATACCTATTAATGGT GCAAAAACAATCAAGACAGAGACAGAGATAAGAGACAGTAACAAAATACA GTATAATAGACAGAAATGCTGCTACACCGCCTGCGTGCGCCGCTTTCATG CATCATAACTGTTTGATACGTACGCCTTGTCGGTCATCGACTAGGCACGT GCCCTGGTGGACGACTTCATGGCGCTCTACGAAGCGCACGTCCTAAAGCC TTTGGCTCATCTAGAGAGGAACGACCGAGGGGGAAAATGCCCGGCCACAA AAGATGGCAAAGACGGCGATGGGAATCGTGAGAGCTTTGGGCGCTCGTTA TCCCCCCCCAAACTCGACTCCATGGAAATGCTGAGAAAGATGGGGTCCGA GGAGTATGCACGGTGGTCGCCCGCGGCGAAAAGCCGCGCGTTGGCAATGC TCTGTGATGAGGCCATGGGTTCGGGTACCCTGAGCGATGTCGCCCGCAAA GTCTTCGAGGCTCGGGAGATGGTTGATAGAAAGGACCGAGAGGTGAGGAA GAAAAGCAGTAAAACTATCCCTATGGCCTGAGAATCGATATGCAGCCGTG CGTAGGGTGTGTGGTGGTGGTGCTGAGCCAAGTCTACGTGGATCCATATT TTACCGAGATGGCGGTGGTCCAAGTGTCGCGATCGGGCGTGTTTCTCATA AACGTTTGCGCTGCCATTCCTGTAGATATCATAGTATTAATAGCATTCCT CGCGCGTGCTATCGTGTGGCGTGATCGCTGTGATGGCGTGTCTTCAGATG AAGGCGGCTGTCAAGGACGTGATACGAGGGCAGCAGGAAAGAGGGCCCCA GAGGTGAGTAGACATACCACGATATGCTCTGACGTGTCTTAGTTTGACAA TCGCGCCAAAACCTTCAACAGTCTTAGATAGAGTGATGGGAGTGAAATGT GTGGAGACGAATGGTATCTCAGACCGCTCTTGCCCCCTTGAAGCCGAACT AGTAAACACTCAAATGAGTGAACATTACGTGAAGATGATATTTTTTTACT GTCGTAACCCTCTATAGCGCATTAAGCCAACCTCCGGGTGATGAACAGCG TGAACCCCAACGTTGAGAATAATGTCCCACCGTCCACTCGTGCGTTGAAA TTATCACGCTATCACGCTGAAAAACGGCCCACCACTCGATTTGGCGTGGC AGGTTGCAGGCGCCGACCTCAACGAGCCGCCGTGGAACAGAGGCAGAAAT GGTGGCGGCTAGAGTAGCGGCGGAAGGGCCCGAATTTAGGACTATAAGAC AATTGGGGCATCTGAGGGTTCGATTAAAGCCTCTCGGCACTGACCGCTAC CGTCGCCGCTACTGGCTGCTAGCTCGGGGAGAGGTGGGCATTCACTTGCT TTACCTCTTTGTCGTAGTTTTTGCGCCGAGTTCTTGAAAATCGATGCTTG GTATGGGTCTTGTCGCGAACGATCATTCCAGGTAAAGTGGCCCTTAGAGC GGTCGTAGATGCATGTGGTAGCGGTCACAATGACTCAACCGTCCTGTTTT GTATGCCCTGCAAGATCGAAAGTACGACGATACTAACATGCCGTGGATAG CTTCGTCATATTGTTAACAAGACAGTTTTTTCTGTACATAATGTCCGTCG CGCGGTGTGCTGATCTCACATCTTCTGAGACGGTGCCATGCCAAAGCACC CGTTTCTTGCCCCTTTGTGACAGTTTCCAGGACATTTTGTTCAGGCCACG AAGCCGGCTTTCCCATCGCCGTTAACCCCGCGCATCATTGTCGCAGGATC ACCGAGTCTTCACACAACTTGATGATGAGTGGGGCTGCTACGAAAGGGTG TCGCAGCTGAAGGCGTTGCTTGCCTGGCTGGATAGGAGAGGGACCAGGGA GCGCGTGTTGAAGGTGACGGCCAAGAATTTACAGTATAGAACACGTAGCT CGGCTGTCACAATAGACTTCTTTTCAAAAACACAGTGCGTATCGTCAACA TGTACAGACATGAATCGACTTGGAGTGTGTGACGCAAATAATATCGAATG ACGTACGTAGTCGAGGGCAAACGATTGTCGTATCCGATGGATCGAGCCAC CTAGTTTAGCGTGAAAACATAAGGATAGGTCTCCAGGGGTGCTTGCAACA ACGTGAGGCATACACTACATTCGATCTTCGACGAGCTAAGCTCATGGCCA ACCCTCACGTTCCGGCGTGAGAGCGCGTTGCAGCTATTCGTTCCGTTTCA TATTTTTTTCCGTGGCAACGGGAAGCGCTGATTACCGGCTTCTCCTACAG GCCGCAATTCGAGAGCATTTGACGGCAAATCTGGTGCAGCTATTCCTTCC GTTTCTTACTTTTTCCGTGGCAACTGAAAGCGCTGATTACCGGCTTCTCG TACAGGCCGCAATTCGAGAGCATTTGACGGTAAATCTGGGAGTCTCTACA GATGACCTTTATCCGCCGAGCAGGCCATCGCGAACAGACTGGAATACGGG CAAGGGCTCTAAATGCTACGAAGAAGATCGCCAGGAGGTCCGTACAATGG TACCCGAGCCGCTGTTTGCCGCCGCGATGCTCCGATCTTTCCGCTCGGCC CGCCTTTGTTTTCATGGACGTGAAACCTGAGAATGGTTCCATTTGAGTTC GGAGCCTTTGTGGTAGAGCTAGGGTGGGCAGTGGTTTCTTTCTCTAGCCA ACGATCTGGTCATCGGGCATTGTGCGGAAAAACCTACGCCGGGCGCTATC GGTCGGCCTTGAAGTGAAAACTTCCGACCGTTTTCCCTTGGCGGTCTTCT AAAGCCAGCCACAGTGTGCTTCAGCGTGTATGCATGTACTTGTGTACAGT TATATATCATGCAGAGTATGCAGCAACCAGATATGGTTGCCAAATCCTGC TCGTGGCAAGCTGATAGGAGAAAGGAAATTTAACCAGTCCCCGTTTGCGC CTGATTACAGTCCACTGTGTCATCAGTGAGTACCTTGCTATATCCAGACT GATATGTGATTGCCTCACCGTGGTTTGTTCTTTTTTGTGTTTATAGTACA TTGGAGAGCCGGCgGGGGTCGCTCGCGAGAAGGAGCGAGAGCGAGCAGCC GGAAAGGAGGCTCTCAAATCTTGCGGCTTCTTCGCGGAAGAACAACGGGA CGTACTTGAACAACAATGCAGGTGATGCGGATGGTACCCTCAACATGCGA GTGGCAATCAGCACTGTGCGACGGCCTCGACAAAACGGATCCCATGCTGC TCCTTTACACGGTCGGGCGTCCGCGTAGGTGTATCATTTCGTAAGTTGTG CCGACGAGAGATGACGAATTTTGGCAGCACAGCCCGTGCGTCTAGTGCGG GGATTATATAGTAAATAATATGGGAAAGCTTCTTCGTTACGTTGGGTGGC AGATGGGGAATCTGATCGTGGTGACGTCGGGCTTGCATCCAGTGAAACGC CTCCGACTTGTGTGTCGTTACCAGTGTGCGTCTCTTCGCCCCTATCTCGC CGCCCCTCGCTGGCCTCGTGGTCAGCGCTTTCGCCGTGGACCGGCATAGC CTACGCGCGGCCGGGCTGGCCTTTGAACCAGAGACGTCGGCCGTGGTCAT GCGTGACCTCGTCATTCACATGGGGCCTCACGGGCTGGGTCTGTTGCTAA ATGTACAGCGCGGTGGCGTTGTGGTGTCCGAGCTCACGCAGCTcCCACCT GGCATTGTGAACCCAGGGCAGGTGGGAAGAAAATGACGGCAATGTGGGGG CGTAGCGGGGCGATCGATAACCGTAGAGAGGTGGTTTATTGCCTGCTTTG CGGGCATCATGAGTATTCCATCCCTTTGATTAATTCTTACTGTCGCCGTC GTTGCGACCATCTGCTCTTGCAGCAGTAGTCGAATGTCTCTTCCGAGGTG CAACCATGGCGTTCTAACGTTCAGTAATTTGGCACTGTATTGTACGCAGG CATGTATTTGGTATAGGTCGTGTGCGCTTCGACGTGAGGCGATGGCAAGC CTACCCGCGGCGGCACTCCTTGGTAGTATGCTCTTGTGTCTCTCTAAGTC TCTAAAACGCATGACATTACAGGCGGCGGGCGTGCAAGTCGGAGACTTAG TTGTATCGGTCGACAGCATCGTGGCGGAGAAGCCCAGATCATTGGCCGAA GGGTTGAACAATGAGCATTTGGTCAAATCGGGCAAAAACGCCATCATGAA GGTGAGCCTCAACGTTCGTCGTGGTGGATGCTCGTGTTTTTTATTGAAAA CGCCGTGGAAAGCAGTGTTCGGACTCAACAAAACGTTGGGTCGAGCAATT TTTAGCTCGTGGTTTACTACGTGGTGACGCGATCCCGCTGCAGCTTGACT TCACTTGCTTTGTCGTTTTTTTTGCTCAAAATGTGACGACCCAACATCCA GGTATTGACACGAGTGCCGCTGACGGACGGACGAGGAGAGCCACTGGCGA GCGCGATGAAGTACAGCGCAGTTGACATGGTCAAGGTCAGAACAGAAACC CTCTGCTCCGGTAGTTCTCATCACGATCGATTCTCCTGATGTTGCCAACA CTGAAAAAAGGGCAACGTTTTCGATGTACTGCTGCATCGTTGTGGTACGT TCGGAACGCGGTCGATGTGTTACGACGGACGGCTCCTCTGAAGGCAACAA CTGTAGACCTAGCGGGCTGTTCCCATCCGTGATCGGGGTACGAAAGACCC CTTGCACACAAAACCCAACATTTCAGTTGCTTGACGCATGTGCTATTTAT TGCAGTTCAATCGACTATTTCTCGAGTAGTACCGTGGTTTTGACACAAGA GAGGTCGACGTGCATATAAACCCTCCCCTCGCGCCCCTAGAGAAAGTGCT TTCGCCCTTGTACATGGCAGTACCCACGATCGCGTCATGACGAGAACGCG TCCGCTCCCCGACTGTCCCCATTTCCTCTGAGATACTCTCCTCGCCGCTC TACTTTAACAGGGAGCGCTACTGGAAGGAGAGATAATGCTGCATCACAGC TTCGTGATTGGGGCTGGCTGGAAGGGTCAGGCCTGCCGTGAGTGGAGACT GGGGGTTTCATTCGCTGGGCAAGGCGTCGGCCGGGGCTTGGAGCACGGGA CGTTGACTGCCGCGGGGACCACATGGACGAATTCCTCGGGCAGAACTGGG CAGACGGATGGGGTTAAGGCCACGACGTTCCCTACAGGACACCACCCGCC ATTACAGGGAGTGGGCGCGGTTGAGCTTGGGCCGACAACCGAGGAGGCCG TGAGGGATGCAGTGAAGCAGCTAGGGTGGAGGATGCTTCAGCTGGAGGCC TTGGTCTCCCAGCAGGACACGTGAGCAACGTGTAGCTCGTTTGGTTGTGG CGCAGCTTGCCTGTTCTTCTCCGAATCGCTTCCTGCTTGACGCGATGTTT CCGTGATAGGTCGTGCGTAATGTGAACGGGACGGTCTTGAAGGAAAGGGC CCTTACTTAAACTTCGGTGTATCCGCGTGTATTGAAGTACCATTCGCCCA CGTTGCCTTGATCCCTTTGTGGCTGTGGCCTCCAGAGTTGTGGATGCGCG ATGGGGAAAGAAGGGTCGACGTCGCAAGTGGCGAACCTTCGTCCACAACG CGCAGACGGCAGTTCAACTTCTCGCAGCATGGGGAGCTTTCAAAGTGAGT CATTCTGCTAATTTTTGACATAGGAGGAACCACAGGTATTAATCTGCTGT AGTCTGAGGTTTCCCATGGAATTTGCCTTGCCCTTAACGCTTCAACCACC GATCTTTGGTATGCCCATATCCTTGCCGCTACTACTAATAGCAAGAGTGT TTACATCGTCGAATGTTGAGTGCCTAAAGCGGGAGGTGCTCTTGCTTGTT GACCGGTGCATTGCACAGAAAATGATCGACTGGGAGGCAGCGAGCGGGTG CTTCTCGAAGCTCGACCGCCGAACGTTCCTGGCGCTCCTACCGGCAAATG CGCGGAACGAAATACCGGACAAGGGTAACAGCGTGATTTACTTCGGCGAT GGGCACGCGCTCTCTGTCGAAGCCGAGGTGTGTACAGCGATGTTTTTGGA AACGTCTGAGTGGTGTCCTTGGGAAGAGTACTTGCCTACCTCAGTCTAAG TACCTGATCTGGTCGGACTTCCAAGGGTATCATGGAGCAGTCCCAAAGTG CGTTGCCAGATTGACACGGCGTCATGTGGTTTATCGCTCTCCATATTTTT CGGTTATAGCCCTTTTCTAATACCCGCCCTCATTCGTTTCATCGCGAAAC GTTCGTTATTTTTTCTCAGGCAAAGGCTGGGTACAGGGCCGCGGGGGGGG TCGACGCGCCGAAGCCAGGGGCAATTCGACACTTCACGGTGACGTCTGTA GGATATCACCAGGGAGGATCACGCAGAAGGGCGAAGGGGGCGCAACCATT CGTGACGATGGAGCTGGAGGTGATGCGATGGATGCGCCGAACGTCGGGGA TCAAGGCGTTATTTTAGCATGTTCCTTCTCGGTGCTGTGGTGGCGCTGCA TAGTGTTCGCTGACTCCCCCCTCCTCTTACCTCCTTCCCCTTTAGCTTTA GCTTTGGCTTTTGGAATTGTTGCGCATTTTTTTACGAGGGAGTATACCAA CTGCTGGAGCTTTTGTAGAAGGGACTGTGGCGGTAGTTGTTTGAAGCGGC GTCCAACTTTTTCTAGCTACTTATGTTTATATTATAATTTTACTATAAAG CATGCGCATAAAGGCTCTACTTTAACCTTTCCAACTTTCGGTAACCCGCG TTGCGTGACATCAATCCCAGCCATTGCCGACGCCGGATGCGCTCCCCGAG CTGGGGTTGCTTCCGCCGTCGGAGCCTTTTGGCACCCTAAATCGTCTTCT TAAAAGATCTATAAAGGCCATGAGGGGGACGCGAGACGCTATGCATTTTC TTGAGCCTGTAAGCAGGATGATATATCCAGGTGAGACTGACTATTAATAC CATTCCACGACATACGGCTCCCCTCACCCGCCACCCTTCCGCAGACAAAA AGTTGAAGTCGACGGGGCGAAGCTTGAGAGTGCTCCGCCCACCCGACCTG ACCGACGAAACCTAGCTCTAGTTGGTATGGTAGTTTGATATGATGAGTTA TGATGGCTTCCAACGCATGGCGTCTGCTGTGACGCCGTTGCCTCCGGACT TACAGACTACTACGACGTCATCTCGGAGCCGATGGATCTAAGCAAATTAT GGAAACGCTGCTCCACTTGCCGCTACAAGACGGTGGAGCAGTTTAAGCAC GATTTGTCGCTAGTGGCCTCCAACTGTCGACTGTACTGCCAGGAGAAATT TCCCAACCTTCCCCCGCGGCAGATGCAGCCGTCAAGGTGAGAAAGTGGGG AGGTGGTTGACTGGGTGTTAGCACGAGGTTGTAAGTCTCTCTCGTGCACC GCCTTGCTTCATATTTTCCCCATTTCAGGATGTCTTGCAAGCACAAGTGT TTCCATATCTTTTGCAAGTGCCCTCGGTAGTGTTACCCTCTAACGTATTG ACCATCTTTCGGCTTTAAATGTCCGTGTGTGTTATTCAGAGACTTGAGAA TAGCTCGTCCGCTTTTTTTGAACATATTTGAAGTGCAGCGGTCATAATGT TGACAGCGGTGATGACTCAGCGTCTTGTTTTTGTCGCTTCCGGTAATGCT CAGGTGGGTATGGCTACGCTCGACGAACCCACTCTTGCAGCGGCTTTGAG AAAAACGGTGGAAGACGGAAGTCGTTTAGAGCATGTATGGGACACGCACA TGGGGGCTGAAATTCGCGCGGCACCCGAACTGGCGACCATGCCGGGGATG CGGAAGATCGCAAGGTATGGTGGTCCTGAAGCCCGCATGAGGCGTGCATG AAACTATTAATAGGGCACTGGTTACCTGTAGCATTTTGTAGTTAGAGCCC ATCTTTACGTGGACGTTTACATGGGAAAGTTTCGCAAGCTGCGAGCTCCG GGATCTCAGGTTCTCTCTTTTCTGGATAGCGTATCACGTCACGTGGACGT TCAGAGCGAGGGACCTGCACAGCTTAGAGGTGTGGTTGTGTCGTCATCGC GTTTTGTGAACATCGTGTCGGCCCTGGAATCGAGCAGGCAGTTGGGGTTT TCCACTGGAGGTGATCAGGAAGCGGGCGGAGATACGAGGGAAAGTGAAAG CGACGACGATGACGACCAGCCGGACGCGGCAAGCATCGCACGGCAGGTTC GTGGGTGGACTTTGTCCGCTCTTTGCGACCCTTGGACATTCGCTAACACG CTTCGTATTTCTTGTTTTACGAGCGTTGGCATATTATCGGATTCATGCGC TCGGCCCTCCAAGGGTGCGCTCTACAAGAAAATGCCCTTTCACCTTGAGT CAACGGACGTGGTAGAGTGTTTTCGGTTACTGAGATTTTGGTATTCCTTT ATCTCGACTTCACATCCTCTCTCTCTTGCCGAACGCGATCGTCCCGCGTC ACTCGTCCGCGCGATCATTTTCTCAGGTATTCTACGATAAGCTTATCGGG ATAAAATACGGGACATCAGAGGCGGGCAATCCTTCACTCACGCGTCCGCG AAAGCATGAAGAGCGGAATCCCACGAAGCCGCGGCCTAAACCAGAGTATG GGGCAAGGATCGGATTCCCCGAGGAAGTCACGCATTCCAAAGCAGCAACA ACGTGTGCGTCTTCTTCGTCATCGACGGCCGTACTTTCCGAGCATCAACC GCTCGACCTTGTTGCGAAAGTTGACCCCCCATCATCGTTGACAGAAGTCG CGCCGATGGATGTCGAACCAGAAGTAATCACGCCGCCGAATACAATGAAG GTACCGTCCACCGATCGGGTTGCTATGGCCGACACAACCGATATGGAAAT CGACGCCGCGGGAACCATTCCGACTTCGTCAGCGAGGGTAAAGTCGGAAG ACACCGATCGCTGGGTAGCAGCGAAGGCGGGTAGTGACGATGCTTTGGCT ATGACTCCATTGGCGACTGGATCGGCGGGTGGAATGGGGACGACGGCGAG CGAAGGCGTTCAGGTTGAGCCTGATTCTTGTGCTCGGACCGAAGCCCGGC CTGGCGGGACGCTGAGGGTTTCTATGCAACTTAGCAATAAAATGCCGGAG TTTGTCGTCATGACCTCAAAGTACGAAGATGCCGTTCGATTCGAATGGAG ATCCGAGATGCGAATACAGATGTCCTCCTCGGAAGAGACAGGTACGGGTG AGCTGGTTGGCTGACAAAAGAGCGAGCACCATAACCCACCGATACCTGTT TTTGTCTGAACCTGTGTCTCTAGAGAAACGGTTGGTACAGTTGACGATTA TCCCAGAGCTTGCTTGCATTTGTTTCTGTCTGCGGGAGACAAAATACATT TGCGTCAACGTCTCCCCCGCCTCTTTGCCCTCAATGCTGAACTGCTGAAC TGCTGCGACCGCAGGGGAATCTTCTCGAGTGTTTGAGGGTATGCTGGTGG GAGCGAAGGCAAAGGAGAAGGACACGGGGATGATGCCGTGGGAAAGCCTT GTGGTAGAGTGGGACGACGAGGCAGATGTCAAAACGGTAAATTCGTGGGA GGTAGAGGCTGTGTCGGCTGCTATGGTGGCCGCACGTCACCGCCCACCCG GGGGGTAGTTGGGGCTCTTTTCGTATTGCTATTTCTACCTGTTGGGAGGA CTTTCACGAGCACGGCTTGTGTGTGGCGTGTTGTACGAGAACCTTCGGCG ATCACTTCCCGAAGTTGTATGTGGGAGGGTTTGGCCTGTGGTGGGCAGTT TCTCGAACACAACATCGTGTGTATGGCGTCAAGTCGGAACTCATGCTGAA ATGGCCTATGTGGCAAGCACTTTGATGATGTCATGGCGTGTGTTAAGCGT ATTATTGTTGGAGCAAATTATGCGAGCGATTACCTGTTGTAGCTAATAGT AGTACTCGACGAACTTTACTTGTGTGTAGGGAATAGTATTGTTGGGGCAC ACGATGCGATGACTTGTGGTGAGTGCTTGGACGGACTTGTGTTTGGGGGG TGCTGTTGAAGCACATACATTGTAGCAAGTTTTTGCACGAACTTATATAT TTCGCGTATCGTCGGAGCACGCAGTATAAAATGTGTTCACATCACCAAAA GGGCCAGAGGCCTCAAAATGTCACAAATTAACCAGGAATAGGAACATGGA TCTTTCTCCGACATTCTCCCCGATTGGAGGCACCTCGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig740:348158..359295+

>mRNA_F-serratus_M_contig740.18666.1 ID=mRNA_F-serratus_M_contig740.18666.1|Name=mRNA_F-serratus_M_contig740.18666.1|organism=Fucus serratus male|type=CDS|length=5748bp|location=Sequence derived from alignment at F-serratus_M_contig740:348158..359295+ (Fucus serratus male)
ATGCCTATGCAGGCGATAGCGCTTGATCCTTTGGGAGAGGTGATTCGCAT
CTTGCGGTACGTGATGCGGTCCGAAGAGTCCAAACCCTTCCTAGGCACGC
CTACGGACGCCGACATCAACCCCGAAGGCGTGGTCACGGGCCACCAGCCT
AGGCGGCCGTTGGACCTAGGCACAATCCTGGAGCGTGCGGAGAATGGGTG
GTACGACATGGACCCTCGGAGCCAGATGCCTATGCAGGCGATAGCGCTTG
ATCCTTTGGGAGAGGTGATTCGCATCTTGCGGTACGTGATGCGGTCCGAA
GAGTCCAAACCCTTCCTAGGCACGCCTACGGACGCCGACATCAACCCCGA
AGGCGTGGTCACGGGCCACCAGCCTAGGCGGCCGTTGGACCTAGGCACAA
TCCTGGAGCGTGCGGAGAATGGGTGGTACGACATGGACCCTCGGAGCCAG
CCTCCAGTGACGTCCAACAGCTTCGGCGCCGGACATGCAGGAGTAGCGCA
GGACGTGGAGCTGGTGCAGGAAGGCTGGTTGGAGGCTAGGGGTAGAGACA
GCGTAATCTACGAGCAGCCTCCAGTGACGTCCAACAGCTTCGGCGCCGGA
CATGCAGGAGTAGCGCAGGACGTGGAGCTGGTGCAGGAAGGCTGGTTGGA
GGCTAGGGGTAGAGACAGCGTAATCTACGAGCAGGCACGTGCCCTGGTGG
ACGACTTCATGGCGCTCTACGAAGCGCACGTCCTAAAGCCTTTGGCTCAT
CTAGAGAGGAACGACCGAGGGGGAAAATGCCCGGCCACAAAAGATGGCAA
AGACGGCGATGGGAATCGTGAGAGCTTTGGGCGCTCGTTATCCCCCCCCA
AACTCGACTCCATGGAAATGCTGAGAAAGATGGGGTCCGAGGAGTATGCA
CGGTGGTCGCCCGCGGCGAAAAGCCGCGCGTTGGCAATGCTCTGTGATGA
GGCCATGGGTTCGGGTACCCTGAGCGATGTCGCCCGCAAAGTCTTCGAGG
CTCGGGAGATGGTTGATAGAAAGGACCGAGAGGCACGTGCCCTGGTGGAC
GACTTCATGGCGCTCTACGAAGCGCACGTCCTAAAGCCTTTGGCTCATCT
AGAGAGGAACGACCGAGGGGGAAAATGCCCGGCCACAAAAGATGGCAAAG
ACGGCGATGGGAATCGTGAGAGCTTTGGGCGCTCGTTATCCCCCCCCAAA
CTCGACTCCATGGAAATGCTGAGAAAGATGGGGTCCGAGGAGTATGCACG
GTGGTCGCCCGCGGCGAAAAGCCGCGCGTTGGCAATGCTCTGTGATGAGG
CCATGGGTTCGGGTACCCTGAGCGATGTCGCCCGCAAAGTCTTCGAGGCT
CGGGAGATGGTTGATAGAAAGGACCGAGAGATGAAGGCGGCTGTCAAGGA
CGTGATACGAGGGCAGCAGGAAAGAGGGCCCCAGAGATGAAGGCGGCTGT
CAAGGACGTGATACGAGGGCAGCAGGAAAGAGGGCCCCAGAGGTTGCAGG
CGCCGACCTCAACGAGCCGCCGTGGAACAGAGGCAGAAATGGTGGCGGCT
AGAGTAGCGGCGGAAGGGCCCGAATTTAGGACTATAAGACAATTGGGGCA
TCTGAGGGTTCGATTAAAGCCTCTCGGCACTGACCGCTACCGTCGCCGCT
ACTGGCTGCTAGCTCGGGGAGAGGTTGCAGGCGCCGACCTCAACGAGCCG
CCGTGGAACAGAGGCAGAAATGGTGGCGGCTAGAGTAGCGGCGGAAGGGC
CCGAATTTAGGACTATAAGACAATTGGGGCATCTGAGGGTTCGATTAAAG
CCTCTCGGCACTGACCGCTACCGTCGCCGCTACTGGCTGCTAGCTCGGGG
AGAGGATCACCGAGTCTTCACACAACTTGATGATGAGTGGGGCTGCTACG
AAAGGGTGTCGCAGCTGAAGGCGTTGCTTGCCTGGCTGGATAGGAGAGGG
ACCAGGGAGCGCGTGTTGAAGGATCACCGAGTCTTCACACAACTTGATGA
TGAGTGGGGCTGCTACGAAAGGGTGTCGCAGCTGAAGGCGTTGCTTGCCT
GGCTGGATAGGAGAGGGACCAGGGAGCGCGTGTTGAAGGCCGCAATTCGA
GAGCATTTGACGGTAAATCTGGGAGTCTCTACAGATGACCTTTATCCGCC
GAGCAGGCCATCGCGAACAGACTGGAATACGGGCAAGGGCTCTAAATGCT
ACGAAGAAGATCGCCAGGAGGCCGCAATTCGAGAGCATTTGACGGTAAAT
CTGGGAGTCTCTACAGATGACCTTTATCCGCCGAGCAGGCCATCGCGAAC
AGACTGGAATACGGGCAAGGGCTCTAAATGCTACGAAGAAGATCGCCAGG
AGTACATTGGAGAGCCGGCgGGGGTCGCTCGCGAGAAGGAGCGAGAGCGA
GCAGCCGGAAAGGAGGCTCTCAAATCTTGCGGCTTCTTCGCGGAAGAACA
ACGGGACGTACTTGAACAACAATGCAGTACATTGGAGAGCCGGCgGGGGT
CGCTCGCGAGAAGGAGCGAGAGCGAGCAGCCGGAAAGGAGGCTCTCAAAT
CTTGCGGCTTCTTCGCGGAAGAACAACGGGACGTACTTGAACAACAATGC
AGCGCTTTCGCCGTGGACCGGCATAGCCTACGCGCGGCCGGGCTGGCCTT
TGAACCAGAGACGTCGGCCGTGGTCATGCGTGACCTCGTCATTCACATGG
GGCCTCACGGGCTGGGTCTGTTGCTAAATGTACAGCGCGGTGGCGTTGTG
GTGTCCGAGCTCACGCAGCTcCCACCTGGCATTGTGAACCCAGGGCAGCG
CTTTCGCCGTGGACCGGCATAGCCTACGCGCGGCCGGGCTGGCCTTTGAA
CCAGAGACGTCGGCCGTGGTCATGCGTGACCTCGTCATTCACATGGGGCC
TCACGGGCTGGGTCTGTTGCTAAATGTACAGCGCGGTGGCGTTGTGGTGT
CCGAGCTCACGCAGCTcCCACCTGGCATTGTGAACCCAGGGCAGGCGGCG
GGCGTGCAAGTCGGAGACTTAGTTGTATCGGTCGACAGCATCGTGGCGGA
GAAGCCCAGATCATTGGCCGAAGGGTTGAACAATGAGCATTTGGTCAAAT
CGGGCAAAAACGCCATCATGAAGGCGGCGGGCGTGCAAGTCGGAGACTTA
GTTGTATCGGTCGACAGCATCGTGGCGGAGAAGCCCAGATCATTGGCCGA
AGGGTTGAACAATGAGCATTTGGTCAAATCGGGCAAAAACGCCATCATGA
AGGTATTGACACGAGTGCCGCTGACGGACGGACGAGGAGAGCCACTGGCG
AGCGCGATGAAGTACAGCGCAGTTGACATGGTCAAGGTATTGACACGAGT
GCCGCTGACGGACGGACGAGGAGAGCCACTGGCGAGCGCGATGAAGTACA
GCGCAGTTGACATGGTCAAGGGAGCGCTACTGGAAGGAGAGATAATGCTG
CATCACAGCTTCGTGATTGGGGCTGGCTGGAAGGGTCAGGCCTGCCGTGA
GTGGAGACTGGGGGTTTCATTCGCTGGGCAAGGCGTCGGCCGGGGCTTGG
AGCACGGGACGTTGACTGCCGCGGGGACCACATGGACGAATTCCTCGGGC
AGAACTGGGCAGACGGATGGGGTTAAGGCCACGACGTTCCCTACAGGACA
CCACCCGCCATTACAGGGAGTGGGCGCGGTTGAGCTTGGGCCGACAACCG
AGGAGGCCGTGAGGGATGCAGTGAAGCAGCTAGGGTGGAGGATGCTTCAG
CTGGAGGCCTTGGTCTCCCAGCAGGACACGGAGCGCTACTGGAAGGAGAG
ATAATGCTGCATCACAGCTTCGTGATTGGGGCTGGCTGGAAGGGTCAGGC
CTGCCGTGAGTGGAGACTGGGGGTTTCATTCGCTGGGCAAGGCGTCGGCC
GGGGCTTGGAGCACGGGACGTTGACTGCCGCGGGGACCACATGGACGAAT
TCCTCGGGCAGAACTGGGCAGACGGATGGGGTTAAGGCCACGACGTTCCC
TACAGGACACCACCCGCCATTACAGGGAGTGGGCGCGGTTGAGCTTGGGC
CGACAACCGAGGAGGCCGTGAGGGATGCAGTGAAGCAGCTAGGGTGGAGG
ATGCTTCAGCTGGAGGCCTTGGTCTCCCAGCAGGACACAGTTGTGGATGC
GCGATGGGGAAAGAAGGGTCGACGTCGCAAGTGGCGAACCTTCGTCCACA
ACGCGCAGACGGCAGTTCAACTTCTCGCAGCATGGGGAGCTTTCAAAAGT
TGTGGATGCGCGATGGGGAAAGAAGGGTCGACGTCGCAAGTGGCGAACCT
TCGTCCACAACGCGCAGACGGCAGTTCAACTTCTCGCAGCATGGGGAGCT
TTCAAAAAAATGATCGACTGGGAGGCAGCGAGCGGGTGCTTCTCGAAGCT
CGACCGCCGAACGTTCCTGGCGCTCCTACCGGCAAATGCGCGGAACGAAA
TACCGGACAAGGGTAACAGCGTGATTTACTTCGGCGATGGGCACGCGCTC
TCTGTCGAAGCCGAGAAAATGATCGACTGGGAGGCAGCGAGCGGGTGCTT
CTCGAAGCTCGACCGCCGAACGTTCCTGGCGCTCCTACCGGCAAATGCGC
GGAACGAAATACCGGACAAGGGTAACAGCGTGATTTACTTCGGCGATGGG
CACGCGCTCTCTGTCGAAGCCGAGGCAAAGGCTGGGTACAGGGCCGCGGG
GGGGGTCGACGCGCCGAAGCCAGGGGCAATTCGACACTTCACGGTGACGT
CTGTAGGATATCACCAGGGAGGATCACGCAGAAGGGCGAAGGGGGCGCAA
CCATTCGTGACGATGGAGCTGGAGGCAAAGGCTGGGTACAGGGCCGCGGG
GGGGGTCGACGCGCCGAAGCCAGGGGCAATTCGACACTTCACGGTGACGT
CTGTAGGATATCACCAGGGAGGATCACGCAGAAGGGCGAAGGGGGCGCAA
CCATTCGTGACGATGGAGCTGGAGCCATTGCCGACGCCGGATGCGCTCCC
CGAGCTGGGGTTGCTTCCGCCGTCGGAGCCTTTTGGCACCCTAAATCGTC
TTCTTAAAAGATCTATAAAGGCCATGAGGGGGACGCGAGACGCTATGCAT
TTTCTTGAGCCTGTAAGCAGGATGATATATCCAGCCATTGCCGACGCCGG
ATGCGCTCCCCGAGCTGGGGTTGCTTCCGCCGTCGGAGCCTTTTGGCACC
CTAAATCGTCTTCTTAAAAGATCTATAAAGGCCATGAGGGGGACGCGAGA
CGCTATGCATTTTCTTGAGCCTGTAAGCAGGATGATATATCCAGACTACT
ACGACGTCATCTCGGAGCCGATGGATCTAAGCAAATTATGGAAACGCTGC
TCCACTTGCCGCTACAAGACGGTGGAGCAGTTTAAGCACGATTTGTCGCT
AGTGGCCTCCAACTGTCGACTGTACTGCCAGGAGAAATTTCCCAACCTTC
CCCCGCGGCAGATGCAGCCGTCAAGACTACTACGACGTCATCTCGGAGCC
GATGGATCTAAGCAAATTATGGAAACGCTGCTCCACTTGCCGCTACAAGA
CGGTGGAGCAGTTTAAGCACGATTTGTCGCTAGTGGCCTCCAACTGTCGA
CTGTACTGCCAGGAGAAATTTCCCAACCTTCCCCCGCGGCAGATGCAGCC
GTCAAGGTGGGTATGGCTACGCTCGACGAACCCACTCTTGCAGCGGCTTT
GAGTGGGTATGGCTACGCTCGACGAACCCACTCTTGCAGCGGCTTTGA
back to top