mRNA_F-serratus_M_contig738.18633.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: D7G867_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G867_ECTSI) HSP 1 Score: 424 bits (1091), Expect = 6.300e-127 Identity = 257/514 (50.00%), Postives = 328/514 (63.81%), Query Frame = 1
Query: 253 RWVRKVPTGVLIGSSEASVNPQRMHVCVNRISMEERSRLGPSLELSRALEATSLVVFAATPRDQDRFFWTPLHPKPDWSKAREDLGCALRCTDSEWGA-----VPLLVVLSVQDSVLNR--GKTRRPSDATLRELVLQDAWGGLGLQEVAQRGASVRATVVGFHEFESRSKEAAASREGLVFSGEAEEASSNDLASNVAELSGQAPKQPLVATRSLQEMFKTAISRATRDNRYASAAGLILPACRFEDPPLEAVVRAAARATAHVCRLLERKADAWPMREFAVVISSVGQPGDVDGKHRVEVAFVPGAAPPVVGELRFPILESEGFG--VWKNTATNMRLRVGTSGGLPLDW-TSWRSLGLEPSHAAPSPSFFA--VMEAAHLPPVPMEIAGAFSPEALFGRGNTRPLGVMGAWDQVEQLEGYLGRGVLPNDLRNRLAEALACGTMMRGSPPPWRTLVRDALEKRV------ESAVGPPVAVHFVVASGQDRLAQRDD--IVPGLLKAEDFRVP 1734
R +R++ T S ++S PQ +H+CV R+S+ E RL PS +LS L+A S+V+FAATPRDQ+RFFW+PLHPKPDWS+A+ +L AL G VP+LVV+ V+DSVL R G + RE +L+DAW GLGL+EVAQ G S R +VG HEFESRSK AAA G+VF+G E+A S D+A +AEL+ +AP+ PLVATR LQE+ TA+SRAT D+RYA A GL LP R+EDPPL VV AA RAT HVC LL R++ AWP+ EFA + V G+ R E+ +VPGAA GE+ L++ V + A ++ + SG LPLDW T S G+ PS P + A V+ AA LPP+P ++A AFSP L GR RPLG AW++VE+LE YLGRG++ +LR RLAEALA G MM+G PPPWRTLVRDA+ +RV E A P+ VHF+ + GQDRL VP LL+AE F P
Sbjct: 1251 RELRELRTTTPARSEKSSAPPQWIHLCVQRVSIHEGCRLEPSSQLSEKLKAASVVIFAATPRDQERFFWSPLHPKPDWSQAKAELRLALESASPRGGGTASVGVPVLVVIPVKDSVLQRDAGCANPAAFDRTRERILEDAWEGLGLREVAQYGCSFRVALVGLHEFESRSKAAAARGAGVVFAGSLEDACSEDVAGKLAELAERAPRHPLVATRCLQELLNTAVSRATTDDRYADAVGLPLPPSRYEDPPLGCVVEAANRATEHVCHLLVRRSSAWPIAEFAATATVV------HGRQRREMMYVPGAARAAGGEIAGSPLDAPDCATHVEPSDAGRLKTALEASGALPLDWETVLPSFGM-PSRTNPGFAGGADVVLRAAFLPPIPPKLAEAFSPNVLAGREGARPLGPEVAWNRVEELETYLGRGLMAQELRFRLAEALAGGVMMKGPPPPWRTLVRDAIARRVVLARSGEGAGLRPLVVHFIASFGQDRLEGETGRGAVPRLLEAEIFGGP 1757
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5KVE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE8_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 2.340e-12 Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 28 VKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWV--------RKVPTGVLIGSSEASVNPQRMHVCVNRISMEERSRLG 372
+K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW K PT L + +S + H + + + R R G
Sbjct: 2 LKAARKKRSIARWKALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSRNIKDEDGRVLRDPTFIRQRWAWWFHKLLNTKSPTIDLHAADRSSGGLRTCHSTTSHLYLRLRKRCG 124
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5KIH0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH0_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 3.160e-12 Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 10 SNLRKAVKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+ L+ +K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 58 ATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPFTSQNIKDEDGKVLRDPTFIRQRWAR 142
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5JEB1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB1_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 4.800e-12 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 28 VKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 2 LKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWAR 80
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 6.630e-12 Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 16 LRKAVKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
LR +K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 20 LRAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWAR 102
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5K3I4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I4_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 7.590e-12 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 10 SNLRKAVKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+ L+ +K A KK R A FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD L R+RW R
Sbjct: 79 TTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWAR 163
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5K397_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K397_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 9.780e-12 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 10 SNLRKAVKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+ L+ +K A KK R A FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 54 ATLKAMLKAARKKRSIARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWAR 138
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5J9P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P6_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-11 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 10 SNLRKAVKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+ L+ +K A KK + A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 86 ATLKAMLKAARKKCSIAKWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWSR 170
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5KNN0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN0_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 2.260e-11 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 28 VKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD R+RW R
Sbjct: 2 LKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFTRQRWAR 80
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Match: A0A6H5JVM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM9_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 4.310e-11 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 28 VKIAGKKLRKVRKAAELSFFWDFVRKLEKRTREGDQAGFYKQLKAMNLEGKRDRRSAFVKDENGVLLRDVELIRERWVR 264
+K A KK R A +FF +VR+LEK++REGDQAGFY+ LK +++EGKR S +KDE+G +LRD IR+RW R
Sbjct: 2 LKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWAR 80 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig738.18633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig738.18633.1 >prot_F-serratus_M_contig738.18633.1 ID=prot_F-serratus_M_contig738.18633.1|Name=mRNA_F-serratus_M_contig738.18633.1|organism=Fucus serratus male|type=polypeptide|length=570bp MNLEGKRDRRSAFVKDENGVLLRDVELIRERWVRKVPTGVLIGSSEASVNback to top mRNA from alignment at F-serratus_M_contig738:166005..169389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig738.18633.1 ID=mRNA_F-serratus_M_contig738.18633.1|Name=mRNA_F-serratus_M_contig738.18633.1|organism=Fucus serratus male|type=mRNA|length=3385bp|location=Sequence derived from alignment at F-serratus_M_contig738:166005..169389+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig738:166005..169389+ >mRNA_F-serratus_M_contig738.18633.1 ID=mRNA_F-serratus_M_contig738.18633.1|Name=mRNA_F-serratus_M_contig738.18633.1|organism=Fucus serratus male|type=CDS|length=3420bp|location=Sequence derived from alignment at F-serratus_M_contig738:166005..169389+ (Fucus serratus male)back to top |