mRNA_F-serratus_M_contig736.18595.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: D7FUY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY5_ECTSI) HSP 1 Score: 214 bits (545), Expect = 5.130e-62 Identity = 110/196 (56.12%), Postives = 140/196 (71.43%), Query Frame = 1
Query: 424 SVVEAKCELLDLVSQSMEG--------EEERVASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDEPVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDGMPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
S+ EAK ELL V E EE RV LVE LE ++ PI TVGFFN A QG+W +T++ M PIGPRLT +QFQ+I+ GE +GN+TN I W L+DE + GRLEV C Y + RG M+ SL +HL +L DGMPRDP +LVR+L+RAMPYE+FDP++HA+ETTF+D+++RIV+ RGPK EG VNIF R
Sbjct: 35 SIEEAKTELLGRVGFPTEHPGAERPRLEEARVGYLVEVLEGTYKPIHTVGFFNFAAQGEWDLAYTSAAMVPIGPRLTAHQQFQRIEPGEGLKGNLTNIITWTLKDEGIDGRLEVMCDYSFDPRGRMNTSLRKHL-LLPDGMPRDPQELVRVLRRAMPYELFDPDDHAMETTFLDDTLRIVKHRGPKFEGLVNIFAR 229
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: B8BYW6_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW6_THAPS) HSP 1 Score: 136 bits (342), Expect = 4.400e-30 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 1
Query: 415 SAVSVVEAKCELLDLVSQSMEGEEE--RVASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRL-EDEPV---SGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
SA+S EAK L++L+ + EEE V S V LEE ++P+QT+ F N+A+ G+W + + + M +L + E Q+I++ G+VTN W EDE +G V+C Y +N M V L +H + G +P D LV LL RA+P EMFDPN HA++TT++D +RIVRL GP HEG NIF+R
Sbjct: 472 SALSAEEAKQALIELIPRMTGNEEEYRAVESYVNLLEEKYMPVQTIDFLNLAMTGEWQLLFSTNLMVRPNRKLRLRELVQKIESN-GFNGSVTNMAQWDFAEDEETFDATGNFNVKCSYTINQGARMVVDLDDHELRPAKGSKIPSDVPALVGLLHRAIPKEMFDPNGHAMDTTYLDADLRIVRLTGPNHEGVRNIFIR 669
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A448ZFM7_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFM7_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.310e-30 Identity = 75/210 (35.71%), Postives = 119/210 (56.67%), Query Frame = 1
Query: 406 VED-SAVSVVEAKCELLDLVSQSMEGEEER---VASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDEPVS----------GRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
+ED S V +E K LLDL+ + M+G E V S V TLE+ + P+QT+ F N+A+ G+W + + + + + E FQ+I+ + G V N W L ++ G+ ++C Y +N M + L +H++ L G +P+DP LV +L RA+P E+FDPN+HA++TT++D +RIVR+ GPK E +IF+R
Sbjct: 90 IEDLSTVDTMEIKKRLLDLLPR-MKGTPEEYNMVESYVNTLEDRYTPVQTLDFLNLAMSGEWQLLFSTNLGGSMRMNFRLSELFQRIEAN-SLNGTVVNEATWSLAEDHTDPTPATSFEAFGKFSIKCSYSINQGARMVMELNDHVIELSKGSKVPKDPEKLVGMLYRAIPTELFDPNDHAMDTTYLDGDLRIVRMAGPKFESVRDIFIR 297
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A7S2FVE3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVE3_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.470e-29 Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 487 ERVASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPR-LTVIEQFQQIDTGE--AAEGNVTNAIVWRLEDEPVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDGMPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
E+V LV+ LE ++ PI T+GF N+ V G+W F +T SN+P PR L + Q++ GE G +TN I W L +E SG +E++C Y++ +G + + L EH++ +G P DP L +LQRA+P E+F P E + T+MD +R+V K+ NI+ R
Sbjct: 1 EKVDLLVDRLERAYTPIHTIGFLNLGVAGEWDFRYTTSNLPGHDPRKLRLRSVAQRVAPGEEKVQAGKLTNTIAWELVEEGASGTMEIKCDYMVTPKGDLHLDLTEHVLTPVNGSPADPMQLCGMLQRAVPPEVFMPEELDVHITYMDADIRVVECTSRKYGTSKNIYSR 170
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A1Z5JQY1_FISSO (PAP_fibrillin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQY1_FISSO) HSP 1 Score: 127 bits (318), Expect = 2.630e-29 Identity = 81/208 (38.94%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 397 RSSVEDSAVSVVEAKCELLDLVSQSMEGEEER---VASLVETLEESFIPIQTVGFFNMAVQGKWHFVH-TNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDE-----PVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
+++V+ S +SV ++K +LLDL+ + M G+EE V +LV LE ++ P QT+ F N+ +QG+W + TN + P + + E FQ+I+ + EG + N W L ++ SG V C Y +N M +SL EH++ G +P+D LV LL RAMP EMFDP +HA++TT++D +RIVR GP+ EG +IF+R
Sbjct: 48 KNAVDWSTLSVAQSKEKLLDLLPR-MTGKEEEFRTVEALVNNLEANYQPAQTLDFLNLILQGEWQLLFSTNLSGTPNPAKFRLRELFQRIERHKL-EGKLINEATWDLAEQGDGNFECSGTFTVDCSYKINQGARMILSLDEHILKPAKGTKIPKDVPALVGLLHRAMPKEMFDPADHAIDTTYLDGDLRIVRHTGPRLEGVRDIFIR 253
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A7S0AIY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIY2_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.060e-28 Identity = 69/189 (36.51%), Postives = 111/189 (58.73%), Query Frame = 1
Query: 448 LLDLVSQSMEGEEE--RVASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDE-----PVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
L+DL+ + ++E +V + LE+ ++P+QT+ F N+A+ G W + + + + +L + E Q+IDT + +G VTN W L +E SG V+C Y +N M++ L +H++ L G +P D LV +L AMP EMFDPNE A++TT++DE +R+VRL G + EG N+F+R
Sbjct: 24 LVDLLPRMTGQKDEFRQVEDYINALEDKYVPVQTLDFLNLAMGGDWQMLFSTNRLGIPNTKLRLRELVQRIDT-KNLDGTVTNMARWDLAEEVPGVFDCSGTFSVKCDYGINQGARMNIDLKDHVLELARGSRVPTDVEGLVGMLSGAMPSEMFDPNELAMDTTYLDEKIRVVRLTGSRLEGVRNVFIR 211
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: K0TAS2_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAS2_THAOC) HSP 1 Score: 121 bits (304), Expect = 1.180e-27 Identity = 76/203 (37.44%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 433 EAKCELLDLVSQSMEGEEE--RVASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRL----EDEPVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVRD-----RPLL 1002
EAK EL+DL+S+ EEE + + LE ++ +QT+ F NMA+ G W + + + + +L + E Q+++ + G +TN W E SG C Y +N M V L +H + G +P D LV LL RAMP E+FDP+ HAL+TT++D +RIVRL GP+HEG NIF+R +PLL
Sbjct: 40 EAKRELVDLISRIQGSEEEYRAIQDHINFLEAEYVAVQTLDFLNMAIAGDWQLLFSTNLLGRPARKLRLREMIQRVEP-DKLNGTLTNIASWDYAETGEQFDSSGNFSAVCTYSINQGARMVVDLKDHELRPAKGSSIPSDVPGLVGLLHRAMPKELFDPSAHALDTTYLDADIRIVRLTGPQHEGVRNIFMRKGSIEIQPLL 241
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A7S1CY27_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY27_CYCTE) HSP 1 Score: 116 bits (290), Expect = 9.080e-26 Identity = 78/218 (35.78%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 379 SASTPLRSSVEDSAVSVVEAKCELLDLVSQSMEGEEER---VASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDEP------VSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVRDRPL 999
SA+T LRS +S+ E K LLDL+ + M G+EE V V LEE + P QT+ F N+A+ G W + + + ++ + E Q+++T +G V N +W + +P SG V+C Y +N M V L H + L G +P+D ++ + AMP E+FDP+EHA++TT++D +RIVR GPK+EG +IF+R L
Sbjct: 20 SATTDLRS------LSMSEVKDLLLDLLPR-MTGKEEEFRTVEHYVNLLEEQYSPPQTLDFLNLAMTGTWQLLFSTNLRRGSKLKIRLRELTQRVET-IGLKGRVNNVALWDVALDPSSDVFDASGIFSVKCTYSINQGARMVVDLDGHTIELAKGSKLPKDVPAVIASIHGAMPPELFDPSEHAMDTTYLDGDLRIVRYTGPKYEGARDIFIRSGSL 229
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: B7G6D7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6D7_PHATC) HSP 1 Score: 117 bits (292), Expect = 1.490e-25 Identity = 79/210 (37.62%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 424 SVVEAKCELLDLVSQSMEGEEE---RVASLVETLEESFIPIQTVGFFNMAVQGKWHFVH-TNSNMPPIGPRLTVIEQFQQIDTGEAAEGNVTNAIVWRLEDE-----PVSGRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVRDRPLLS*ATAD 1020
S E K ELL+L+ SM G+E+ RV LV LE + P QT+ F N+A+QG W + TN + P + + E Q+I+ +G VTN +W L + +G V+C Y +N M V L +HL+ G +P+D LV L RAMP +FDP++HA++TT++D +RIVR G + EG +IF+R L T D
Sbjct: 75 SAAEIKGELLELLP-SMTGQEDEFRRVEELVNALEARYQPAQTLTFLNLAMQGSWQLLFSTNLSGTPNPAKFRLRELTQRIECNNL-DGVVTNQALWDLAEAGDAAFDATGTFSVKCNYSINQGARMIVDLEDHLLQPARGSAIPQDVQGLVGYLHRAMPKTLFDPSDHAMDTTYLDVDLRIVRYTGARLEGSRDIFMRASALEINPTKD 282
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Match: A0A7S2SIP7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIP7_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.530e-25 Identity = 75/197 (38.07%), Postives = 108/197 (54.82%), Query Frame = 1
Query: 433 EAKCELLDLVSQSMEGEEER---VASLVETLEESFIPIQTVGFFNMAVQGKWHFVHTNSNMPPIGPRLTVIEQFQQIDTGEAA--EGNVTNAIVWRLEDEPVS-----GRLEVRCGYVLNSRGLMDVSLGEHLVMLDDG--MPRDPTDLVRLLQRAMPYEMFDPNEHALETTFMDESMRIVRLRGPKHEGRVNIFVR 987
E K +L+DL+ M G+EE V + V LEE FI QT+GFFNMA+ G W F+ T S +L + E Q++++ EA+ EG + W L ++ G + C Y +N M + L +HL+ G +P+D LV +L RA+P EMFDP A++TT+ D +RIVR G +HEG NIF +
Sbjct: 122 EIKDKLVDLLLH-MTGKEEEFRLVETYVNVLEEKFISPQTLGFFNMAISGDWQFLFTTSVNNRPSSKLRLSELVQKVESDEASPFEGKLITKANWALAEDDTQTFDCYGSFTIECLYKVNQGTRMIIDLDQHLLEPAKGSKIPKDVQGLVGMLHRAIPKEMFDPEGLAIDTTYADPDVRIVRFTGKRHEGVRNIFFK 317 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig736.18595.1 >prot_F-serratus_M_contig736.18595.1 ID=prot_F-serratus_M_contig736.18595.1|Name=mRNA_F-serratus_M_contig736.18595.1|organism=Fucus serratus male|type=polypeptide|length=302bp MDGHYVERSRQNVGRAVMITAALACALQPISSFVTSGGPAALQWMASPSLback to top mRNA from alignment at F-serratus_M_contig736:167441..176979+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig736.18595.1 ID=mRNA_F-serratus_M_contig736.18595.1|Name=mRNA_F-serratus_M_contig736.18595.1|organism=Fucus serratus male|type=mRNA|length=9539bp|location=Sequence derived from alignment at F-serratus_M_contig736:167441..176979+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig736:167441..176979+ >mRNA_F-serratus_M_contig736.18595.1 ID=mRNA_F-serratus_M_contig736.18595.1|Name=mRNA_F-serratus_M_contig736.18595.1|organism=Fucus serratus male|type=CDS|length=1812bp|location=Sequence derived from alignment at F-serratus_M_contig736:167441..176979+ (Fucus serratus male)back to top |