mRNA_F-serratus_M_contig735.18581.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: D7FSL6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL6_ECTSI) HSP 1 Score: 605 bits (1561), Expect = 1.500e-206 Identity = 305/360 (84.72%), Postives = 330/360 (91.67%), Query Frame = 1
Query: 1027 GFAESSRSFPTKEHQGVLLEAPISANAPDSLEFGDYADVLVERMTDPAAWPVGVGVYAQWGAGKAKPATSPERWFTRWLWMTTGGSVVYALWAGLASAVSCRCCRSPAHDDQINNVEKGLGPTSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQGELILRQAQSMG-ESVGITHLGFMADVQDELQVLLGMLERKSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRRE 2103
G + SSR FPTK+HQGVLLEAP+S+ PD LEFGDYADVLVERMTDPAAWPVGVGVYAQWGAGK+ P SPE WF RWLW TTGGSVVYALWAGLASAVSCRCCRSPA DD++N+VE GLG TSAD+P RVTSVVA FDAWLFADSKVLWAVLISEIFHQVEEH FGKGAVRATRVRHAVTSSTC+DWCLVIFTAV+VAGV AA LA+EQIANMQE LEQVVA+A LAAVPIS+LLWIFK+LPV+FKGQGELI+ +AQSMG ESVGI HLGFMADV+DEL+VLLGMLE+KS KEDRYMLV SIDNLDRCPHRQIVKVLEAVHLLLEKD VNVAV+LALDPRVIIAAIE+DMGEG+R+E
Sbjct: 273 GLSRSSRPFPTKDHQGVLLEAPVSSEGPDCLEFGDYADVLVERMTDPAAWPVGVGVYAQWGAGKSAPTPSPEWWFIRWLWTTTGGSVVYALWAGLASAVSCRCCRSPARDDRVNDVEDGLGSTSADQPARVTSVVASFDAWLFADSKVLWAVLISEIFHQVEEHPCFGKGAVRATRVRHAVTSSTCSDWCLVIFTAVIVAGVVAAAKLAAEQIANMQEVLEQVVATAGLAAVPISLLLWIFKVLPVVFKGQGELIVEEAQSMGDESVGIAHLGFMADVRDELEVLLGMLEQKSTKEDRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDNVNVAVMLALDPRVIIAAIEQDMGEGIRKE 632
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6H5JLB7_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB7_9PHAE) HSP 1 Score: 360 bits (925), Expect = 4.490e-109 Identity = 206/411 (50.12%), Postives = 255/411 (62.04%), Query Frame = 1
Query: 1048 SFPTKEHQ-----GVLLEA---------PISANAPDSLEFGDYADVLVERMTDPAAWPVGVGVYAQWGAGKAK------------PATSPERWFTRWLWMTTGGSVVYALWAGLASAVSCRCCRSPAHDDQINNVEKGLGPTSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQGELILRQAQSMGESVGITHLGFMADVQDELQVLLGMLERKSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRREVSGVEYLDKIIHWPFCIPSGTVAERLSLLESWL 2202
SFP +E Q G L+ A P S D L+F YA+VLVER+ DP WPV +G+YAQWGAGK+ S F R+L GSV WAGL + C P DD + P P VT ++A FDAWLFADS VLWA L+S+IF QVE H FGKGAVR+ R+R + T C AV+V G+ A GL E + L + +A LA VPISI+LW K LP +F+GQGE+IL +A+SM ESVG LGFMADVQ+E+Q+LL M+ +S ++ ++ LV SIDNLDRCPHR IVKVLEAVHLLLE+D+ NV VILALDPRVII+AIE D+G +R+EVSG EYLDKIIH PFC+P GT +RL+L++SWL
Sbjct: 129 SFPPREEQRLHREGALVGADQQEEKENGPSSLELQDKLDFDKYAEVLVERLRDPDTWPVSLGIYAQWGAGKSSLLRLILERFERITKVSEPSCFVRFLRSNILGSVFLEAWAGLRGCCVAKLC--PPTDDTV--------PV----PVPVTCILASFDAWLFADSDVLWAFLVSKIFDQVEAHPCFGKGAVRSFRLRKTSSEITMERLCFAAMGAVIVVGLAVALGLIIEATGGLDNVLTKALAFVGLAGVPISIVLWTIKALPAVFQGQGEVILNKAKSMHESVGSARLGFMADVQEEIQILLDMITDRSTEKMKFALVVSIDNLDRCPHRNIVKVLEAVHLLLERDQTNVVVILALDPRVIISAIEADLGPEVRKEVSGSEYLDKIIHVPFCVPFGTQKQRLTLIDSWL 525
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6H5K326_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K326_9PHAE) HSP 1 Score: 199 bits (507), Expect = 2.710e-54 Identity = 134/325 (41.23%), Postives = 191/325 (58.77%), Query Frame = 1
Query: 1246 WFTRWLWMTTGGSVVYALWAGLASAVSCRCCRSPAHDDQINN------VEKGLGPTSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQGELILRQAQSMGESVGITHLGFMADVQDELQVLLGMLERKSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRREVSGVEYLDKIIHWPFCIPSGTVAERLSLLESWL 2202
WF RW+W G L + ++ + + DD +N +EK + T VVA FDAWL+AD+++LWA L+ +F +VE A FGK +VR RVR+A T D C A ++ VG A ++++ E++ V+ VP ++L + KG+GE IL QA+SMG+SVG +HLGFMA+V++ELQ+LL M++ +++++ LV SIDNLDRCPH IV+VL+AVH LLEK N +ILALD RV+IAAI M + +R+ VSG EYL+KII+ PF IP GT+ +R L + L
Sbjct: 22 WF-RWIWRFFGRFAHGVLLGDQTALLNIVRNKLRSDDDGNDNDQSSTDIEKQQTKRPRSDGKKTTCVVASFDAWLYADTQLLWARLLCGVFVKVE--ARFGKFSVRRARVRNAFRDPTL-DVCAAAALATLL--VGAVAQAIADEVG--WEDVGNVL---GYGGVP--------RVLYIAIKGRGENILAQARSMGKSVGSSHLGFMAEVEEELQLLLDMIKDMGTEKEKFALVVSIDNLDRCPHDDIVQVLQAVHFLLEKPGANFILILALDSRVVIAAIGAGMDDLVRQRVSGSEYLEKIIYVPFFIPDGTMEDRKILSDVML 327
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.390e-19 Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 16 TMAQMDREALVALYNATGGPNWNRKKNWKKDAGLSQWQGINTNGQGRVVGLNLNSNNLQGFIPKELGALSKLQVLEL 246
TMAQ DREALVALYNATGG W K+NW A LSQW G+ + QGRVV L+L NNLQG IP ELG L+ LQ L L
Sbjct: 95 TMAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFLHL 171
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6P5A1I9_BRABE (kinase D-interacting substrate of 220 kDa-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A1I9_BRABE) HSP 1 Score: 103 bits (256), Expect = 7.710e-19 Identity = 81/278 (29.14%), Postives = 138/278 (49.64%), Query Frame = 1
Query: 1393 TSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRH-AVTSS-----TCTDWCLVIFTAV---VVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQ-GELILRQAQSMGESVGITHLGFMADVQDELQVLLGMLER-KSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRRE-VSGVEYLDKIIHWPFCIPSGTVAERLSLL 2190
T+ P V + F+AW ++ LWA +++++ +VE G R R H TSS T W ++ T + V+ + G + + + + +V+A+ AL A +S I+ L M Q L+ R + + LGFMA V+ E+ V+ +L +S + +Y ++ +D+LDRCP +++KV+EAV +LL + +LA+DPR+++ +IEE GE M+ ++G EYL K++ P C+P ER L
Sbjct: 623 TNLPNPGHVKIIHVQFNAWEYSGCSALWAGIVTKLCDEVEGE--IGPWTTRLYRAIHDKFTSSERPPVTGRLWFKLLVTVILGTVLIVLAVVFGFSGDNPIAIATSIVEVLAAVALGAGMLSNATKIWSFLRKMAVSQTARLVARTTKPNFDQ----ELGFMAKVKTEVNVITYLLRYFESARRKQYRVIVVVDDLDRCPKDKVIKVIEAVGILLSDPNSHFISLLAVDPRIVVKSIEESFGEVMKNSNINGYEYLKKMVQLPICLPDPGAQERKRFL 894
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.090e-18 Identity = 48/73 (65.75%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 16 TMAQMDREALVALYNATGGPNWNRKKNWKKDAGLSQWQGINTNGQGRVVGLNLNSNNLQGFIPKELGALSKLQ 234
TMAQ DR+ALVALYNATGG W +NW A LSQW G+ N QGRVV L+L NNL+G IPKELGALS+L+
Sbjct: 70 TMAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLE 142
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A8K0A204_BRALA (KIDINS220 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A204_BRALA) HSP 1 Score: 100 bits (248), Expect = 6.580e-18 Identity = 78/277 (28.16%), Postives = 132/277 (47.65%), Query Frame = 1
Query: 1393 TSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRHAV------TSSTCTDWCLVIFTAV---VVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQGELILRQAQSMGESVGITHLGFMADVQDELQVLLGMLER-KSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRR-EVSGVEYLDKIIHWPFCIPSGTVAERLSLL 2190
T+ P V + F+AW ++ LWA +++++ +VE G R R H S T W ++ TA+ V+ + G+ + + + +V+ AL A + I+ L M Q ++ Q LGFMA V+ E++V+ +L ++ + +Y +V +D+LDRCP +++KV+EAV +LL +LA+DPR+++ +IEE G+ MR ++G EYL KI+ P C+P ER L
Sbjct: 336 TNPPNPGHVKVIHVQFNAWEYSGCSALWAGIVTKLCDEVETE--IGPWTTRLYRAIHDKFMASERPSVTGRVWFKLLITAILGTVMIVLAVLFGIRGDTPVLIATSIVEVLCGVALGAGMLKNATKIWSFLRKMTISQRARLMAQTTKPNFD---QELGFMAKVKTEVKVVTYLLRYFEAARRKQYRVVVVVDDLDRCPKDRVIKVIEAVGILLSDPNSYFISLLAVDPRIVVKSIEESFGDVMRNANINGYEYLKKIVQLPICLPDPGAEERKRFL 607
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A8K0A0Q0_BRALA (KIDINS220 protein n=3 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A0Q0_BRALA) HSP 1 Score: 100 bits (248), Expect = 7.510e-18 Identity = 78/277 (28.16%), Postives = 132/277 (47.65%), Query Frame = 1
Query: 1393 TSADKPTRVTSVVACFDAWLFADSKVLWAVLISEIFHQVEEHAYFGKGAVRATRVRHAV------TSSTCTDWCLVIFTAV---VVAGVGTAAGLASEQIANMQEELEQVVASAALAAVPISILLWIFKILPVMFKGQGELILRQAQSMGESVGITHLGFMADVQDELQVLLGMLER-KSIKEDRYMLVASIDNLDRCPHRQIVKVLEAVHLLLEKDKVNVAVILALDPRVIIAAIEEDMGEGMRR-EVSGVEYLDKIIHWPFCIPSGTVAERLSLL 2190
T+ P V + F+AW ++ LWA +++++ +VE G R R H S T W ++ TA+ V+ + G+ + + + +V+ AL A + I+ L M Q ++ Q LGFMA V+ E++V+ +L ++ + +Y +V +D+LDRCP +++KV+EAV +LL +LA+DPR+++ +IEE G+ MR ++G EYL KI+ P C+P ER L
Sbjct: 630 TNPPNPGHVKVIHVQFNAWEYSGCSALWAGIVTKLCDEVETE--IGPWTTRLYRAIHDKFMASERPSVTGRVWFKLLITAILGTVMIVLAVLFGIRGDTPVLIATSIVEVLCGVALGAGMLKNATKIWSFLRKMTISQRARLMAQTTKPNFD---QELGFMAKVKTEVKVVTYLLRYFEAARRKQYRVVVVVDDLDRCPKDRVIKVIEAVGILLSDPNSYFISLLAVDPRIVVKSIEESFGDVMRNANINGYEYLKKIVQLPICLPDPGAEERKRFL 901
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 8.920e-18 Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 19 MAQMDREALVALYNATGGPNWNRKKNWKKDAGLSQWQGINTNGQGRVVGLNLNSNNLQGFIPKELGALSKLQVL 240
MA DR+ALVAL+ +TGG W R+ NW DA + W G+ N QGRVV ++L SNNLQG IPKELGAL+KL L
Sbjct: 1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASL 74
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 3.260e-17 Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 19 MAQMDREALVALYNATGGPNWNRKKNWKKDAGLSQWQGINTNGQGRVVGLNLNSNNLQGFIPKELGALSKLQ 234
MAQ DR+ALVALY ATGG NW +NW DA L W G++ N QGRVV L L NNL+G IP LG L+ LQ
Sbjct: 1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig735.18581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig735.18581.1 >prot_F-serratus_M_contig735.18581.1 ID=prot_F-serratus_M_contig735.18581.1|Name=mRNA_F-serratus_M_contig735.18581.1|organism=Fucus serratus male|type=polypeptide|length=728bp MAQMDREALVALYNATGGPNWNRKKNWKKDAGLSQWQGINTNGQGRVVGLback to top mRNA from alignment at F-serratus_M_contig735:293015..300956+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig735.18581.1 ID=mRNA_F-serratus_M_contig735.18581.1|Name=mRNA_F-serratus_M_contig735.18581.1|organism=Fucus serratus male|type=mRNA|length=7942bp|location=Sequence derived from alignment at F-serratus_M_contig735:293015..300956+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig735:293015..300956+ >mRNA_F-serratus_M_contig735.18581.1 ID=mRNA_F-serratus_M_contig735.18581.1|Name=mRNA_F-serratus_M_contig735.18581.1|organism=Fucus serratus male|type=CDS|length=4368bp|location=Sequence derived from alignment at F-serratus_M_contig735:293015..300956+ (Fucus serratus male)back to top |