mRNA_F-serratus_M_contig735.18579.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig735.18579.1
Unique NamemRNA_F-serratus_M_contig735.18579.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 2.330e-147
Identity = 221/253 (87.35%), Postives = 228/253 (90.12%), Query Frame = 3
Query:  405 LRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
            LRANANPLLSAYGSLPLGTAVYNGHLKVV ELV   G D CT DGG L LA AASR +V+IV FL D GVVDTEGVALCAAIEGCSEACV LLLRRQ G  +   RAYVNM HGTLPETYD+FVFQET LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDE FIGTPL+LATSYFRRFSPMRVHREMVRGLKGVIRLLRQEE VHAVSWTWPIDTGRS+ERASRKKSTSIARMLPLL+RRAA
Sbjct:  148 LRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAA 400          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 1.760e-140
Identity = 219/257 (85.21%), Postives = 232/257 (90.27%), Query Frame = 3
Query:  411 ANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAACLIIHL 1181
            ANANPLLSAYGSLPLG AVY+GHL+VVRELV   G D CT DGGAL LA AASR +V+IVAFL + GVVDTEGVALCAAIEGCSEACV LLLRRQ G A+TG RAYVNMDHGTLPETY+EFVFQET LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSY RRFS M+VHREMVRGLKGVIRLL+QEE VH+VSWTWPIDTGRS ER SRKKSTSIARM+PLL+RRAA L + L
Sbjct:  571 ANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSRKKSTSIARMVPLLKRRAATLRVLL 827          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 6.000e-127
Identity = 205/248 (82.66%), Postives = 210/248 (84.68%), Query Frame = 3
Query:  420 NPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
            NPLLSA                   ELV   G DGCT DGGAL LA AASRN V+IV FL D GVVDTEGVALCAAIEGCSEACV LLLRRQ  KAST  RAYVNMDHG+LPETYDEFVFQE  LVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEE VH+VSWTWPIDTGRS+ERASRKKSTSIARMLPLL+RRAA
Sbjct:  543 NPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAA 790          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.330e-118
Identity = 201/293 (68.60%), Postives = 208/293 (70.99%), Query Frame = 3
Query:  429 LSAYGSLPLGTAVYNGHLKVV-RELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAI-----------------------------------------------EGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAA 1163
            LSAYGSLPL             RELV   GID CT DGGAL L  AASR +V+IV FL D GVVDTEGVALCAAI                                               EGCSEACV LLLRRQ G A+TG RAYVNMDHGTLPETYDEFVFQET LVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFS M VHREMV  LKGVIRLLRQEE VH+VSWTWPID GRS+ERASRKK TSIARM+PLL+RRAA
Sbjct:  162 LSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAA 454          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 8.400e-69
Identity = 147/304 (48.36%), Postives = 181/304 (59.54%), Query Frame = 3
Query:  303 LIDAGANVDSRLDD------GATPLFFAAKDGRLEAVRVLLRAN--------ANPLLSAYG--SLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATSYFRRFSPMRVHREMVR-GLKGVIRLLRQEETVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRA 1160
            L+ AGA++++R+D       G TPL  AA  G  + + +L+ A         ANP+L+AY   SLPL  A  NG L VVREL QR GIDGC+CDGGA  L  AAS+N V+IV FL D GVVD EG+ALCAA+EG  E C+ LLLR Q   A+   RAY NM H T    Y   +F +T LVS F LG F++PR  RLLL AGAD  S VR+     EG E +  +  TPL +A S    +       E V  GLKGVIRLL+Q + VHA SW WP         ++ +KST I RMLP L+RRA
Sbjct:   83 LVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY-----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWP---------SALEKSTPIVRMLPGLKRRA 372          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.970e-60
Identity = 122/268 (45.52%), Postives = 155/268 (57.84%), Query Frame = 3
Query:  294 MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLA--TSYFRRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRS 1091
            MV LI+AGANVDSR+ DG+T ++ AA  G LEAV +L +  ANPLL    + PL  A + GHL VV+ELVQR GIDGC  +G    L  AA  N+  I+ FL D GV+DT+G ALC AIEG +EAC+ LL+ R+ G      R Y N+D+            +E  L+  F  G  HAPR  R LL+ GAD  + VRF  +      DE  +   + L    +YF+     RV      GLKGV+RLL+QE  VHA SW WP DT R+
Sbjct:  143 MVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRVD-----GLKGVVRLLQQEAAVHANSWAWPTDTDRA 394          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 5.540e-58
Identity = 123/268 (45.90%), Postives = 152/268 (56.72%), Query Frame = 3
Query:  294 MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGSLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDHGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM--RVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTGRS 1091
            MV LIDAGANVDSR+ +G+T ++ AA  G L+AV++LL+  ANP+L    + PL  A + GHL VV+ELVQR G+DGC+ +G    L  AA  N+  I+ FL D GV DT+G ALC AIEG SEAC+ LL+ R+ G A      Y N D              + +LV  F  G  +APR  R LL+ GAD    VRF      GE      G PL  A    R           E V GLK V+RLLRQE+ VHA SW WPIDT R+
Sbjct:  130 MVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKG-LGE----IAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRA 381          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 5.180e-41
Identity = 82/97 (84.54%), Postives = 83/97 (85.57%), Query Frame = 1
Query:    1 TDIDRRCGDTNRTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEARPGGFMVDGIYGTPLHVAATKGFSQ 291
            T IDR CGDTN+TPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHHSVYH HLAVSKDLIEAGADLEAR GG        TPLHVAATKGF Q
Sbjct:   19 TGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGG------KDTPLHVAATKGFCQ 109          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 5.350e-32
Identity = 115/307 (37.46%), Postives = 150/307 (48.86%), Query Frame = 3
Query:  321 NVDSRLD-DGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGS---LPLGTAVYNGHLKVVRELVQRVGIDGCTCDG-GALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMD--HGTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVR---------FPCDSDEGEEDEGFIGTPLDLATSYF--RRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTG---------RSIERASRKKSTSIARMLPLLRRRA 1160
            NVD R   DG TPLF A  +G+LEA R LLRANANPL++       LPL +A  NG+L V+REL+QRVGI+GC     G + L  A     V  +A L   GVVDT G AL  +     EA V  LL+        G  AYVN+   +GT P      +     +       SF  PR ARLL+EAGAD T+ +R         F C             TPL L       ++     + ++ +  L+G+ RLL Q E VHA SW WP  +G           +  A+   +  + R+LP+LRRRA
Sbjct:  125 NVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDT-GQALTISAGLGREASVKYLLQNHAKHYGPG--AYVNVRDRNGTTP------LLSSIYVCGVDEQSSF--PRVARLLVEAGADTTTELRRTNSMGVVLFSC-------------TPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRA 407          
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.080e-31
Identity = 116/310 (37.42%), Postives = 156/310 (50.32%), Query Frame = 3
Query:  294 MVVLIDAGANVDSR-LDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYGS------LPLGTAVYNGHLKVVRELVQRVGIDGCTC-DGGALVLAAAASRNYVNIVAFLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDH-GTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYF--RRFSPMRVHREMVRGLKGVIRLLRQEETVHAVSWTWPIDTG-------RSIERASRKK--STSIARMLPLLRRRAA 1163
            M +++ AGA V++R    G TPLF AA+ GRL +V+VLLR  A+ LL A         LPL  A + GHL VVRELVQ+VG+ GC    GGA  L   AS   ++I+AFL D GVVD  G  L +AI+      V LL+ R+ G     ++ YV+ +  G    T     F   +L  +       + R  + L+EAGA     V         E+    + T L     Y   R  + +    EM+ GL+G+ RLL Q+E V A SW WP   G       R I R  +K   S ++A M+PLLRRR A
Sbjct:  163 MSLILGAGAGVNARHRPGGETPLFVAARLGRLLSVKVLLRFKADALLPAQFENRKDKWLPLDVAAHRGHLAVVRELVQQVGLGGCGGPSGGADALVITASEGRLDIMAFLLDAGVVDN-GDGLRSAIKAGHSKSVRLLMERRAGD----VKQYVSSESIGDEARTVLFHCFHAQALAPS-------SCRIMQTLIEAGATTRVNVMI-----NYEDRPPTMLTDLVQYADYLINRGRTTLTAEEEMMHGLRGLRRLLMQKEAVTATSWAWPAGEGGMRCGGTRGIRRTKKKTKPSAALATMMPLLRRRDA 455          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig735.18579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHQ8_9PHAE2.330e-14787.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE1.760e-14085.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE6.000e-12782.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE1.330e-11868.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE8.400e-6948.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE7.970e-6045.52Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LP44_ECTSI5.540e-5845.90EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LH66_ECTSI5.180e-4184.54EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI5.350e-3237.46EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFP0_9PHAE1.080e-3137.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig735contigF-serratus_M_contig735:285202..286391 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score217.6
Seed ortholog evalue7.8e-54
Seed eggNOG ortholog654926.Q8QNQ8_ESV1K
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010941,GO:0016032,GO:0019048,GO:0019050,GO:0019054,GO:0033668,GO:0035821,GO:0039526,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044531,GO:0044532,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0060548,GO:0065007
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGs4QB1T@10239,4QUVA@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Exons1
Model size1190
Cds size897
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932228.9390366-CDS-F-serratus_M_contig735:285201..2860981622932228.9390366-CDS-F-serratus_M_contig735:285201..286098Fucus serratus maleCDSF-serratus_M_contig735 285202..286098 -
1690964208.373808-CDS-F-serratus_M_contig735:285201..2860981690964208.373808-CDS-F-serratus_M_contig735:285201..286098Fucus serratus maleCDSF-serratus_M_contig735 285202..286098 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932228.9592128-UTR-F-serratus_M_contig735:286098..2863911622932228.9592128-UTR-F-serratus_M_contig735:286098..286391Fucus serratus maleUTRF-serratus_M_contig735 286099..286391 -
1690964208.389148-UTR-F-serratus_M_contig735:286098..2863911690964208.389148-UTR-F-serratus_M_contig735:286098..286391Fucus serratus maleUTRF-serratus_M_contig735 286099..286391 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig735.18579.1prot_F-serratus_M_contig735.18579.1Fucus serratus malepolypeptideF-serratus_M_contig735 285202..286098 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig735.18579.1

>prot_F-serratus_M_contig735.18579.1 ID=prot_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=polypeptide|length=299bp
MVVLIDAGANVDSRLDDGATPLFFAAKDGRLEAVRVLLRANANPLLSAYG
SLPLGTAVYNGHLKVVRELVQRVGIDGCTCDGGALVLAAAASRNYVNIVA
FLGDVGVVDTEGVALCAAIEGCSEACVNLLLRRQWGKASTGLRAYVNMDH
GTLPETYDEFVFQETSLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPC
DSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEE
TVHAVSWTWPIDTGRSIERASRKKSTSIARMLPLLRRRAACLIIHLTL*
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mRNA from alignment at F-serratus_M_contig735:285202..286391-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig735.18579.1 ID=mRNA_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=mRNA|length=1190bp|location=Sequence derived from alignment at F-serratus_M_contig735:285202..286391- (Fucus serratus male)
ACCGACATCGACCGACGCTGTGGTGATACGAACCGGACACCGCTGATGGT GGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAGACCTTCTGCGACAGG GTGCCAGCGTCTCGGTAGCGGACAGCGACGGTTATACTGCTCTGCACCAC TCGGTTTATCACAAACACCTGGCCGTGAGCAAAGACCTGATCGAGGCGGG AGCGGACCTTGAAGCGAGGCCCGGTGGCTTCATGGTTGATGGCATTTATG GTACACCACTTCATGTGGCCGCGACGAAAGGGTTTTCCCAGAAATGGTGG TGCTGATCGACGCAGGCGCGAATGTGGACAGCAGGCTCGACGACGGAGCA ACACCGCTGTTCTTCGCGGCAAAGGACGGGCGGCTCGAAGCTGTCAGGGT TCTCCTTCGGGCGAACGCGAATCCGCTGTTGTCAGCGTACGGAAGTCTCC CGCTAGGAACGGCGGTTTACAATGGACATCTGAAAGTGGTCCGCGAACTT GTGCAGCGAGTCGGAATCGACGGTTGTACCTGTGACGGTGGCGCGCTGGT TCTCGCCGCGGCCGCTTCTCGCAATTACGTAAACATCGTTGCATTTCTGG GTGACGTCGGTGTGGTTGATACGGAGGGCGTAGCCCTGTGTGCTGCCATT GAGGGATGTAGCGAGGCGTGCGTCAACCTTCTGCTGCGCAGACAGTGGGG AAAGGCCAGCACAGGTTTGCGTGCGTACGTCAATATGGACCACGGTACTC TCCCGGAAACCTATGACGAATTCGTGTTCCAAGAAACATCGCTGGTAAGC ACATTCAATCTGGGAAGCTTTCATGCTCCCAGATTCGCGCGCTTGCTACT TGAAGCCGGGGCGGACGCGACATCGGGCGTTCGGTTTCCGTGCGACAGTG ATGAGGGGGAAGAAGACGAAGGGTTCATCGGCACGCCCCTGGACTTGGCT ACATCTTATTTTCGCAGATTCAGTCCAATGAGAGTCCACCGCGAGATGGT GCGGGGGCTGAAGGGTGTCATCCGCCTGCTGCGACAGGAGGAGACAGTTC ACGCGGTGTCCTGGACATGGCCAATCGACACCGGTCGTTCTATAGAGCGT GCGTCCCGGAAGAAATCAACATCGATCGCTCGCATGCTCCCGCTTCTGAG GCGGAGGGCGGCGTGTTTGATTATACATCTTACTTTGTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig735:285202..286391-

>mRNA_F-serratus_M_contig735.18579.1 ID=mRNA_F-serratus_M_contig735.18579.1|Name=mRNA_F-serratus_M_contig735.18579.1|organism=Fucus serratus male|type=CDS|length=1794bp|location=Sequence derived from alignment at F-serratus_M_contig735:285202..286391- (Fucus serratus male)
ATGGTGGTGCTGATCGACGCAGGCGCGAATGTGGACAGCAGGCTCGACGA
CGGAGCAACACCGCTGTTCTTCGCGGCAAAGGACGGGCGGCTCGAAGCTG
TCAGGGTTCTCCTTCGGGCGAACGCGAATCCGCTGTTGTCAGCGTACGGA
AGTCTCCCGCTAGGAACGGCGGTTTACAATGGACATCTGAAAGTGGTCCG
CGAACTTGTGCAGCGAGTCGGAATCGACGGTTGTACCTGTGACGGTGGCG
CGCTGGTTCTCGCCGCGGCCGCTTCTCGCAATTACGTAAACATCGTTGCA
TTTCTGGGTGACGTCGGTGTGGTTGATACGGAGGGCGTAGCCCTGTGTGC
TGCCATTGAGGGATGTAGCGAGGCGTGCGTCAACCTTCTGCTGCGCAGAC
AGTGGGGAAAGGCCAGCACAGGTTTGCGTGCGTACGTCAATATGGACCAC
GGTACTCTCCCGGAAACCTATGACGAATTCGTGTTCCAAGAAACATCGCT
GGTAAGCACATTCAATCTGGGAAGCTTTCATGCTCCCAGATTCGCGCGCT
TGCTACTTGAAGCCGGGGCGGACGCGACATCGGGCGTTCGGTTTCCGTGC
GACAGTGATGAGGGGGAAGAAGACGAAGGGTTCATCGGCACGCCCCTGGA
CTTGGCTACATCTTATTTTCGCAGATTCAGTCCAATGAGAGTCCACCGCG
AGATGGTGCGGGGGCTGAAGGGTGTCATCCGCCTGCTGCGACAGGAGGAG
ACAGTTCACGCGGTGTCCTGGACATGGCCAATCGACACCGGTCGTTCTAT
AGAGCGTGCGTCCCGGAAGAAATCAACATCGATCGCTCGCATGCTCCCGC
TTCTGAGGCGGAGGGCGGCGTGTTTGATTATACATCTTACTTTGTAAATG
GTGGTGCTGATCGACGCAGGCGCGAATGTGGACAGCAGGCTCGACGACGG
AGCAACACCGCTGTTCTTCGCGGCAAAGGACGGGCGGCTCGAAGCTGTCA
GGGTTCTCCTTCGGGCGAACGCGAATCCGCTGTTGTCAGCGTACGGAAGT
CTCCCGCTAGGAACGGCGGTTTACAATGGACATCTGAAAGTGGTCCGCGA
ACTTGTGCAGCGAGTCGGAATCGACGGTTGTACCTGTGACGGTGGCGCGC
TGGTTCTCGCCGCGGCCGCTTCTCGCAATTACGTAAACATCGTTGCATTT
CTGGGTGACGTCGGTGTGGTTGATACGGAGGGCGTAGCCCTGTGTGCTGC
CATTGAGGGATGTAGCGAGGCGTGCGTCAACCTTCTGCTGCGCAGACAGT
GGGGAAAGGCCAGCACAGGTTTGCGTGCGTACGTCAATATGGACCACGGT
ACTCTCCCGGAAACCTATGACGAATTCGTGTTCCAAGAAACATCGCTGGT
AAGCACATTCAATCTGGGAAGCTTTCATGCTCCCAGATTCGCGCGCTTGC
TACTTGAAGCCGGGGCGGACGCGACATCGGGCGTTCGGTTTCCGTGCGAC
AGTGATGAGGGGGAAGAAGACGAAGGGTTCATCGGCACGCCCCTGGACTT
GGCTACATCTTATTTTCGCAGATTCAGTCCAATGAGAGTCCACCGCGAGA
TGGTGCGGGGGCTGAAGGGTGTCATCCGCCTGCTGCGACAGGAGGAGACA
GTTCACGCGGTGTCCTGGACATGGCCAATCGACACCGGTCGTTCTATAGA
GCGTGCGTCCCGGAAGAAATCAACATCGATCGCTCGCATGCTCCCGCTTC
TGAGGCGGAGGGCGGCGTGTTTGATTATACATCTTACTTTGTAA
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