mRNA_F-serratus_M_contig734.18574.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig734.18574.1 vs. uniprot
Match: D8LQ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI) HSP 1 Score: 514 bits (1323), Expect = 3.510e-168 Identity = 369/813 (45.39%), Postives = 462/813 (56.83%), Query Frame = 2
Query: 92 QVHAVQQVTRLLRTSRFVD-------DCTAQLEVEGAIADTSNSLLRLAE----AAAAP--SDERKMVPPPDLLGAFRGYLEALATARPDRFALDCRFLAPHVAAVLLLSTALESPGPASLGASVPXXXXXXAEGGGVGSPAQEEVSKGGWPPTVGR----EERQALELWTEMVGICLLPYCGDG--------ELIGEFDVSHDDDXXXNSETEDGQDEVAE----------------GRV---GAVMGSWRV--LQRARGVPTEPQECPFNVQPGGEQEDLPLRLVEAVASVVKAAAAGSRTASVSSSTAVLPILCAFTAARDCSP--------EIYEQVAKETFSCVISIARNSPESSAQAECIKASLISLRECAQVTRLSTLEAWVPSVLSMLEGVPSRLKQLLARSKGQGRKAYTTARSFCREALAAAVACARAVVGRAGASVLIANSRWFLVDFVVAMASPMLLADAVRALYLASEGTQGLGGRQEEATR-------------ALRNVMLPGAVERITKALDSLDRYGAESAKEVLKAAALLAQAA-SREILPYRNRLGVALVECVANEGRASA---GAEADEKLRLCLRAIRRLLSA-------------SSKDARSRDVETSSGAGQSFAEAALDLTCGVVEWEWVREAGARGXXXXXXXXXXXXEDG-ESIAAVVEAHATLVALLRS-DLRVPGLAPDGDWPPPAKRLAKVAWAFADRVRDATGMAGAGRPSSLADDDVMLLCQGAEVLEALADRGGVFFKGSERPVSFFAGELSQVLATIRASQDGDGATFLHPVVIEACAWVR 2272
+ AVQ V + +++S V D A ++ I++TS +L E AAAAP SD R++ PP L R Y+EALATA P RF+ DCR LA VA+ +L+ T +++G +VP + + E + G+P GR EER ALELW EM+GICLLP+CG G +GE S DDD + E G D RV G W ++RA EP ECPF+V+PGG ED+P+RL ++ +AAA+ SR ASVS E + V +E FSC++ ++ PESSAQAEC+KA+L+SL+ECAQ RL LE VP+ LSMLEGVPSRLK LL RSK QG K Y+TARSFCREAL AAVACAR ++G G V++ + RWFL FVV MASP+LL DAV AL AS +G+G E ALR V+LPGAV R+ KAL ++DRY A +AKEVLKA A LA+AA + EI P+RNRLG+ALVEC A+ GRAS G E DEK+RLCLRAIRRL +A ++ D + + A Q F EAAL+ TCGVVE EWV + G RG DG ESI +VEAH TLVALLRS + VPG+ PDG+WPP AKRLAK+AWA A RVR A G + +LADDDVMLLCQG EVLEAL + G FF+G + FF G+LS VL T+R D + +HPVV +AC+WVR
Sbjct: 17 KAQAVQSVAKQIKSSSQVHLKGAAGTDEAATRTLDETISETSRRVLAWVECAAAAAAAPHSSDGRRVFPPVLLTSCCR-YMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIGVAVPCRE----------TKGEGEENDDGFPSRSGRTITIEERNALELWVEMLGICLLPFCGSGGGSRTTSRSGLGEA-TSGDDDNSRDPSGEHGDDPFDSDXXXXXXXXXXXXXXGSRVSGDGKARSRWVAGWMRRAGITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTRSKSQGAKVYSTARSFCREALTAAVACARKLIGLVGGLVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLARAAGAEEIRPHRNRLGMALVECAASVGRASGAGGGVERDEKVRLCLRAIRRLGAAXXXXXXXXXXXXPAAGDVLAAASDREPAAAQQFTEAALEFTCGVVEREWVGKRGERGEQEGG--------DGQESIITLVEAHVTLVALLRSPSMCVPGIGPDGEWPPAAKRLAKLAWAVAYRVRKAAGAVESSM--ALADDDVMLLCQGLEVLEALEECSGEFFEGKRSKMRFFEGDLSPVLTTLRGCHDKN---TMHPVVYDACSWVR 804 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig734.18574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig734.18574.1 >prot_F-serratus_M_contig734.18574.1 ID=prot_F-serratus_M_contig734.18574.1|Name=mRNA_F-serratus_M_contig734.18574.1|organism=Fucus serratus male|type=polypeptide|length=743bp MIRVHKIMESQVHAVQQVTRLLRTSRFVDDCTAQLEVEGAIADTSNSLLRback to top mRNA from alignment at F-serratus_M_contig734:305825..316616- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig734.18574.1 ID=mRNA_F-serratus_M_contig734.18574.1|Name=mRNA_F-serratus_M_contig734.18574.1|organism=Fucus serratus male|type=mRNA|length=10792bp|location=Sequence derived from alignment at F-serratus_M_contig734:305825..316616- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig734:305825..316616- >mRNA_F-serratus_M_contig734.18574.1 ID=mRNA_F-serratus_M_contig734.18574.1|Name=mRNA_F-serratus_M_contig734.18574.1|organism=Fucus serratus male|type=CDS|length=4458bp|location=Sequence derived from alignment at F-serratus_M_contig734:305825..316616- (Fucus serratus male)back to top |