mRNA_F-serratus_M_contig7326.18548.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.250e-58 Identity = 124/322 (38.51%), Postives = 180/322 (55.90%), Query Frame = 3
Query: 201 GLSQADTLSVERAPEVVQPRVENAS------------VETTLVEGRGGKLAKAVESSKLRLMVMIGLEGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYC 1130
LSQ + R +V + RV AS TT+ L K S RL+ + GLEGTGHH++ ++F N L + Y+ M + + + A +MR++A LS PG L SYP + GP KVMQY+DL M+AE AE G+D R++Y++RSA+++++ANTVHR H D+ E ++R F++YMR+L TDIAV+HSFL EI P F+VCHD++ G++ +AS IASF++PN+ IA++ + + + K + + + LPFE A V RLQ KLDAFE+LYC
Sbjct: 90 SLSQTFSHGERRVTDVQEVRVNFASGNPSDSPDVASQPSTTVSNSSTAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKF-HLLMGDDE---ETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAK-KSSRTDPLPFEDAYAVVLRLQRKLDAFEHLYC 406
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 128 bits (322), Expect = 2.040e-29 Identity = 78/235 (33.19%), Postives = 123/235 (52.34%), Query Frame = 3
Query: 318 KAVESSKLRLMVMIGLEGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAAL----CHF-----ISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIA 995
K SS++R++ ++GLEGTGHH++ +++ ++ C+ + E S+ K+ + Y + +R R +M K+A E G + C F +SYP G +K +QY+D R++AE AE GVD+R VY+ RSA DI+ +++ H + FI RILL ++AVVHS E+DP+F C Y + A+A+R+A F+APNN A
Sbjct: 101 KKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKL--CVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNY-----------------GGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTA 316
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.200e-27 Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 3
Query: 807 EAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYC 1130
E E+R F+EYMR+L TDIAV+ SFL+EI P FIVCHD++ G++ +AS IA F+APN+ IA + + + + + + LPFE AD V +RLQ KLDAFE LYC
Sbjct: 6 ETVGEERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYC 113
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.880e-25 Identity = 82/255 (32.16%), Postives = 120/255 (47.06%), Query Frame = 3
Query: 450 CLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAAL----CHF-----ISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMY------------------KEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYCA 1133
C+ + E S+ ++ + Y + +R R +M K+A E G + C F +SYP G +K +QY+D R++AE AE GVD+R VY+ RSA DI+ +++VH + FI RILL ++AVVHS E+DPAF C Y + A+A+R+A F+APNN A K++W K E+V P + A V RLQ +LD E C+
Sbjct: 20 CVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNY-----------------GGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAA--VVTRLQQRLDMVEKDVCS 255
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.240e-24 Identity = 93/309 (30.10%), Postives = 141/309 (45.63%), Query Frame = 3
Query: 150 LGGRMMVRLICIFLLVPGLSQADTLSVERAPEVVQPRVENASVETTLVEGRGGKLAKAVESSKLRLMVMIGLEGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRK-----MALQGEALSEPGHLAALCHFI---------SYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKP 1034
LG +++ + IF + PGL + S P P + S E V + K SS+LR+M ++GLEGTGHH+ + N+F ++ + A C + P T + ERARR++R+ A E ++E AA+ F+ S+P G K +QY+D R+LAE AE GVD+R VY+ RSAR I++++T H H T F+ R L+ + AVV S E+ P F C Y + + R+A F+AP+ A + + KP
Sbjct: 11 LGVVLLMSCLGIFRVWPGLRRHHVDSTGPVPTPA-PTIPPFSFEYPAV------VEKKTVSSQLRVMFLVGLEGTGHHY----FLNVF--DDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQ--AAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT-----------------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVKP 287
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.270e-20 Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 3
Query: 408 MFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQ 773
MF A+ +L + +F +M +++ + ++ R MR +A + + L PG + + ISYP GPQKV QY+DLR+LAE AEAEGVDLR++YMKRSA++++LA+TVHR Q
Sbjct: 1 MFKAHPDLVRFDEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQ 122
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A7S3W283_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W283_9SPIT) HSP 1 Score: 65.1 bits (157), Expect = 2.760e-8 Identity = 48/162 (29.63%), Postives = 79/162 (48.77%), Query Frame = 3
Query: 330 SSKLRLMVMIGLEGTGHHFLETTYKNMFSANEELSADATDCLSML---PYFTEYSMVKTTSHYAEGAERARRDM-RKMALQGEALSEPGHLA----ALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPR 791
S+ +R + + GLEGTGHH A L A+A+D LS L + S++ + A+ + + ++ + ++ P L AL +SYP G M + DLR+LAE+AE GVDLR++ R A D++++ +H ++ PR
Sbjct: 69 SNTVRFVFVAGLEGTGHHLWHAMLAGS-CARSNLCANASDTLSDLIADKLHRKKSIMFSERASGRDAQLVEQKLVERLKIAARTVTSPTSLIIQNNALGGQMSYPDSVGTDVQMHHPDLRLLAELAEIAGVDLRVLLSMRGATDVLISTMIHHPFRNQKGPR 229
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 65.1 bits (157), Expect = 9.490e-8 Identity = 59/234 (25.21%), Postives = 98/234 (41.88%), Query Frame = 3
Query: 312 LAKAVESSKLRLMVMIGLEGTGHH-------------------------FLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAAL---CHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYN 929
L K V ++ RL+ + GLEG+GHH + + T K ++S +L A ++ + + G RA ++R + + L A C +SYP G K+ Q D+R+LAE+AE EGVD R++ + R A ++ + T+HRH N EA +L + + + L +DPAF++C +Y+
Sbjct: 99 LPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAA--------KKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGGCGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFGSWNT-------EAV-----------VLEHNAQTLLAQLQSLDPAFVLCTEYD 306
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI) HSP 1 Score: 62.4 bits (150), Expect = 5.340e-7 Identity = 50/208 (24.04%), Postives = 89/208 (42.79%), Query Frame = 3
Query: 312 LAKAVESSKLRLMVMIGLEGTGHHFLETTYKNM-FSANEELSADATDCL--SMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDY 926
+ K V SS +R + GLEGTGHHF + + + S + +LS + + S+ E H E ++++ + G +SYP GP +++Q D+ LA++AEA G+DLR+V + R ++ + A S ++ +R + +A++ L +DPA++ C Y
Sbjct: 64 VTKKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSADLSQELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSEL------------------ARSYEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTY 253
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI) HSP 1 Score: 62.4 bits (150), Expect = 1.080e-6 Identity = 50/208 (24.04%), Postives = 89/208 (42.79%), Query Frame = 3
Query: 312 LAKAVESSKLRLMVMIGLEGTGHHFLETTYKNM-FSANEELSADATDCL--SMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDY 926
+ K V SS +R + GLEGTGHHF + + + S + +LS + + S+ E H E ++++ + G +SYP GP +++Q D+ LA++AEA G+DLR+V + R ++ + A S ++ +R + +A++ L +DPA++ C Y
Sbjct: 302 VTKKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSADLSQELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSEL------------------ARSYEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTY 491 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7326.18548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7326.18548.1 >prot_F-serratus_M_contig7326.18548.1 ID=prot_F-serratus_M_contig7326.18548.1|Name=mRNA_F-serratus_M_contig7326.18548.1|organism=Fucus serratus male|type=polypeptide|length=354bp MSRPGSHQPAGRRSREQYSRETWTYLGGRMMVRLICIFLLVPGLSQADTLback to top mRNA from alignment at F-serratus_M_contig7326:2696..4633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7326.18548.1 ID=mRNA_F-serratus_M_contig7326.18548.1|Name=mRNA_F-serratus_M_contig7326.18548.1|organism=Fucus serratus male|type=mRNA|length=1938bp|location=Sequence derived from alignment at F-serratus_M_contig7326:2696..4633+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7326:2696..4633+ >mRNA_F-serratus_M_contig7326.18548.1 ID=mRNA_F-serratus_M_contig7326.18548.1|Name=mRNA_F-serratus_M_contig7326.18548.1|organism=Fucus serratus male|type=CDS|length=2124bp|location=Sequence derived from alignment at F-serratus_M_contig7326:2696..4633+ (Fucus serratus male)back to top |