mRNA_F-serratus_M_contig73.18530.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig73.18530.1
Unique NamemRNA_F-serratus_M_contig73.18530.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig73contigF-serratus_M_contig73:677732..678712 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size982
Cds size981
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932216.501819-CDS-F-serratus_M_contig73:677731..6787121622932216.501819-CDS-F-serratus_M_contig73:677731..678712Fucus serratus maleCDSF-serratus_M_contig73 677732..678712 +
1690964202.8231142-CDS-F-serratus_M_contig73:677731..6787121690964202.8231142-CDS-F-serratus_M_contig73:677731..678712Fucus serratus maleCDSF-serratus_M_contig73 677732..678712 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig73.18530.1prot_F-serratus_M_contig73.18530.1Fucus serratus malepolypeptideF-serratus_M_contig73 677732..678712 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig73.18530.1

>prot_F-serratus_M_contig73.18530.1 ID=prot_F-serratus_M_contig73.18530.1|Name=mRNA_F-serratus_M_contig73.18530.1|organism=Fucus serratus male|type=polypeptide|length=327bp
SKAACLGASADVPVYSGGVGMGRRVDGCGCSGAGSNGDAAGVKPIDKDDL
SALEMSELLAGERQQRYGVGGNPGEVDLSESASPHASEYSEWSMRTGSFS
TDMCQAPPPLMEPANPYGDLEIRHERAHGAAESHESATDAKALPATGVKV
QNTPLRPNSDSAEACGSQTAAGPLATTTQMGQRAAEKSVALLEEDTGKEV
GDEDESTDWWSRLRGLSDGSMGSIGKSGHDRRSFFGQALSAFATIVESFE
APPPPATKVTLGGSALLPAGDGDGGGREDVGVGIHSAKSKSKTTNVSFDE
WPGYGARAPKRGSLATTRVAAGDEASV
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mRNA from alignment at F-serratus_M_contig73:677732..678712+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig73.18530.1 ID=mRNA_F-serratus_M_contig73.18530.1|Name=mRNA_F-serratus_M_contig73.18530.1|organism=Fucus serratus male|type=mRNA|length=981bp|location=Sequence derived from alignment at F-serratus_M_contig73:677732..678712+ (Fucus serratus male)
AGTAAGGCAGCGTGCTTAGGTGCGTCGGCTGATGTTCCGGTGTACAGTGG
GGGGGTTGGTATGGGAAGAAGGGTCGATGGCTGTGGCTGCAGTGGCGCCG
GATCGAATGGGGACGCGGCTGGGGTGAAACCGATAGACAAGGACGACCTG
TCTGCGTTGGAGATGAGCGAGTTGTTGGCGGGGGAACGGCAGCAGCGGTA
CGGCGTGGGAGGGAATCCGGGCGAGGTCGATCTATCCGAGTCGGCATCCC
CGCACGCTAGCGAATATTCGGAATGGTCGATGAGAACCGGTTCGTTCTCC
ACCGACATGTGTCAAGCCCCTCCACCACTTATGGAGCCCGCCAATCCATA
CGGAGATTTGGAGATTCGACACGAGCGAGCGCACGGGGCCGCGGAATCAC
ACGAATCGGCGACCGATGCGAAGGCCCTACCGGCGACGGGCGTGAAAGTT
CAAAACACACCCTTGCGACCAAACTCGGATAGTGCCGAGGCTTGCGGGAG
TCAAACGGCGGCTGGCCCCTTGGCTACGACGACACAGATGGGACAGCGAG
CAGCCGAAAAATCCGTAGCACTGCTGGAGGAGGATACTGGGAAAGAGGTG
GGCGACGAGGACGAGTCTACGGACTGGTGGTCAAGGTTGAGAGGCTTAAG
CGATGGGAGCATGGGAAGCATTGGCAAAAGCGGGCACGACCGCCGCAGTT
TCTTTGGCCAAGCTTTGTCGGCGTTCGCCACCATAGTTGAGTCCTTCGAA
GCACCGCCACCGCCAGCAACGAAGGTGACGCTTGGTGGTTCTGCTCTCCT
TCCGGCGGGGGATGGCGACGGAGGCGGCAGGGAAGACGTGGGTGTTGGTA
TCCACAGCGCGAAATCGAAGTCGAAAACGACCAACGTCAGCTTTGACGAA
TGGCCTGGTTACGGTGCCAGGGCGCCAAAGCGAGGTAGTCTTGCGACGAC
ACGGGTCGCGGCGGGAGATGAGGCGTCTGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig73:677732..678712+

>mRNA_F-serratus_M_contig73.18530.1 ID=mRNA_F-serratus_M_contig73.18530.1|Name=mRNA_F-serratus_M_contig73.18530.1|organism=Fucus serratus male|type=CDS|length=1962bp|location=Sequence derived from alignment at F-serratus_M_contig73:677732..678712+ (Fucus serratus male)
AGTAAGGCAGCGTGCTTAGGTGCGTCGGCTGATGTTCCGGTGTACAGTGG
GGGGGTTGGTATGGGAAGAAGGGTCGATGGCTGTGGCTGCAGTGGCGCCG
GATCGAATGGGGACGCGGCTGGGGTGAAACCGATAGACAAGGACGACCTG
TCTGCGTTGGAGATGAGCGAGTTGTTGGCGGGGGAACGGCAGCAGCGGTA
CGGCGTGGGAGGGAATCCGGGCGAGGTCGATCTATCCGAGTCGGCATCCC
CGCACGCTAGCGAATATTCGGAATGGTCGATGAGAACCGGTTCGTTCTCC
ACCGACATGTGTCAAGCCCCTCCACCACTTATGGAGCCCGCCAATCCATA
CGGAGATTTGGAGATTCGACACGAGCGAGCGCACGGGGCCGCGGAATCAC
ACGAATCGGCGACCGATGCGAAGGCCCTACCGGCGACGGGCGTGAAAGTT
CAAAACACACCCTTGCGACCAAACTCGGATAGTGCCGAGGCTTGCGGGAG
TCAAACGGCGGCTGGCCCCTTGGCTACGACGACACAGATGGGACAGCGAG
CAGCCGAAAAATCCGTAGCACTGCTGGAGGAGGATACTGGGAAAGAGGTG
GGCGACGAGGACGAGTCTACGGACTGGTGGTCAAGGTTGAGAGGCTTAAG
CGATGGGAGCATGGGAAGCATTGGCAAAAGCGGGCACGACCGCCGCAGTT
TCTTTGGCCAAGCTTTGTCGGCGTTCGCCACCATAGTTGAGTCCTTCGAA
GCACCGCCACCGCCAGCAACGAAGGTGACGCTTGGTGGTTCTGCTCTCCT
TCCGGCGGGGGATGGCGACGGAGGCGGCAGGGAAGACGTGGGTGTTGGTA
TCCACAGCGCGAAATCGAAGTCGAAAACGACCAACGTCAGCTTTGACGAA
TGGCCTGGTTACGGTGCCAGGGCGCCAAAGCGAGGTAGTCTTGCGACGAC
ACGGGTCGCGGCGGGAGATGAGGCGTCTGTGAGTAAGGCAGCGTGCTTAG
GTGCGTCGGCTGATGTTCCGGTGTACAGTGGGGGGGTTGGTATGGGAAGA
AGGGTCGATGGCTGTGGCTGCAGTGGCGCCGGATCGAATGGGGACGCGGC
TGGGGTGAAACCGATAGACAAGGACGACCTGTCTGCGTTGGAGATGAGCG
AGTTGTTGGCGGGGGAACGGCAGCAGCGGTACGGCGTGGGAGGGAATCCG
GGCGAGGTCGATCTATCCGAGTCGGCATCCCCGCACGCTAGCGAATATTC
GGAATGGTCGATGAGAACCGGTTCGTTCTCCACCGACATGTGTCAAGCCC
CTCCACCACTTATGGAGCCCGCCAATCCATACGGAGATTTGGAGATTCGA
CACGAGCGAGCGCACGGGGCCGCGGAATCACACGAATCGGCGACCGATGC
GAAGGCCCTACCGGCGACGGGCGTGAAAGTTCAAAACACACCCTTGCGAC
CAAACTCGGATAGTGCCGAGGCTTGCGGGAGTCAAACGGCGGCTGGCCCC
TTGGCTACGACGACACAGATGGGACAGCGAGCAGCCGAAAAATCCGTAGC
ACTGCTGGAGGAGGATACTGGGAAAGAGGTGGGCGACGAGGACGAGTCTA
CGGACTGGTGGTCAAGGTTGAGAGGCTTAAGCGATGGGAGCATGGGAAGC
ATTGGCAAAAGCGGGCACGACCGCCGCAGTTTCTTTGGCCAAGCTTTGTC
GGCGTTCGCCACCATAGTTGAGTCCTTCGAAGCACCGCCACCGCCAGCAA
CGAAGGTGACGCTTGGTGGTTCTGCTCTCCTTCCGGCGGGGGATGGCGAC
GGAGGCGGCAGGGAAGACGTGGGTGTTGGTATCCACAGCGCGAAATCGAA
GTCGAAAACGACCAACGTCAGCTTTGACGAATGGCCTGGTTACGGTGCCA
GGGCGCCAAAGCGAGGTAGTCTTGCGACGACACGGGTCGCGGCGGGAGAT
GAGGCGTCTGTG
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